FFCP PHASE1:Hg19::chr6:30130969..30131007,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=89870 | |EntrezGene=89870 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16284 | |HGNC=16284 | ||
|TSSclassifier=strong | |||
|UniProt=Q9C019,A6NN45,Q5SRL0 | |UniProt=Q9C019,A6NN45,Q5SRL0 | ||
|association_with_transcript=0bp_to_ENST00000376694,ENST00000376695,NM_033229,uc010jrx.2_5end | |association_with_transcript=0bp_to_ENST00000376694,ENST00000376695,NM_033229,uc010jrx.2_5end | ||
|cluster_id=chr6:30130969..30131007,+ | |||
|coexpression_cluster_id=C304 | |coexpression_cluster_id=C304 | ||
|description=CAGE_peak_3_at_TRIM15_5end | |description=CAGE_peak_3_at_TRIM15_5end | ||
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|ontology_enrichment_celltype=CL:0000181!5.43e-19!12;CL:0000417!5.43e-19!12;CL:0000668!5.43e-19!12;CL:0000414!5.43e-19!12;CL:0000412!5.43e-19!12;CL:0000182!5.43e-19!12;CL:0000223!1.22e-13!59;CL:0000764!5.21e-08!2;CL:0000765!5.21e-08!2;CL:0000050!5.21e-08!2;CL:0000038!5.21e-08!2;CL:0000558!5.21e-08!2;CL:0000547!5.21e-08!2;CL:0000549!5.21e-08!2;CL:0000550!5.21e-08!2;CL:0000552!5.21e-08!2;CL:1000415!1.04e-07!2;CL:0000066!1.30e-07!254 | |ontology_enrichment_celltype=CL:0000181!5.43e-19!12;CL:0000417!5.43e-19!12;CL:0000668!5.43e-19!12;CL:0000414!5.43e-19!12;CL:0000412!5.43e-19!12;CL:0000182!5.43e-19!12;CL:0000223!1.22e-13!59;CL:0000764!5.21e-08!2;CL:0000765!5.21e-08!2;CL:0000050!5.21e-08!2;CL:0000038!5.21e-08!2;CL:0000558!5.21e-08!2;CL:0000547!5.21e-08!2;CL:0000549!5.21e-08!2;CL:0000550!5.21e-08!2;CL:0000552!5.21e-08!2;CL:1000415!1.04e-07!2;CL:0000066!1.30e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0000182;5.93e-67;12 | |ontology_enrichment_celltype_v019=CL:0000182;5.93e-67;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,6.56e-67,12;CL:0000223,1.19e-13,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.09e-37;11!UBERON:0009497;6.24e-32;13!UBERON:0001041;6.33e-14;30!UBERON:0003104;1.89e-13;31!CL:0000223;2.70e-09;58 | |ontology_enrichment_development_v019=UBERON:0004161;1.09e-37;11!UBERON:0009497;6.24e-32;13!UBERON:0001041;6.33e-14;30!UBERON:0003104;1.89e-13;31!CL:0000223;2.70e-09;58 | ||
|ontology_enrichment_disease=DOID:305!1.69e-18!106;DOID:0050687!6.32e-12!143;DOID:299!1.17e-09!25;DOID:3493!4.69e-08!2;DOID:7!2.78e-07!39;DOID:162!3.57e-07!235;DOID:14566!7.03e-07!239 | |ontology_enrichment_disease=DOID:305!1.69e-18!106;DOID:0050687!6.32e-12!143;DOID:299!1.17e-09!25;DOID:3493!4.69e-08!2;DOID:7!2.78e-07!39;DOID:162!3.57e-07!235;DOID:14566!7.03e-07!239 | ||
|ontology_enrichment_disease_v019=DOID:7;9.45e-07;39 | |ontology_enrichment_disease_v019=DOID:7;9.45e-07;39 | ||
|ontology_enrichment_disease_v019_2=DOID:7,4.43e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0009497!1.51e-33!25;UBERON:0000015!1.51e-33!25;UBERON:0002423!1.51e-33!25;UBERON:0006235!1.51e-33!25;UBERON:0004161!1.51e-33!25;UBERON:0008835!1.63e-25!22;UBERON:0003894!1.63e-25!22;UBERON:0009854!2.89e-24!23;UBERON:0007499!4.55e-22!25;UBERON:0009856!4.27e-21!26;UBERON:0003929!1.76e-19!54;UBERON:0002107!6.48e-18!19;UBERON:0006925!6.48e-18!19;UBERON:0008836!6.48e-18!19;UBERON:0002294!2.48e-17!7;UBERON:0001173!2.48e-17!7;UBERON:0004912!2.48e-17!7;UBERON:0005172!1.47e-16!55;UBERON:0005173!1.47e-16!55;UBERON:0005911!1.77e-15!82;UBERON:0001007!2.30e-15!155;UBERON:0001555!2.30e-15!155;UBERON:0007026!2.30e-15!155;UBERON:0005057!5.75e-15!26;UBERON:0004119!1.63e-14!169;UBERON:0000925!1.63e-14!169;UBERON:0006595!1.63e-14!169;UBERON:0002417!1.73e-14!61;UBERON:0000916!1.73e-14!61;UBERON:0004921!1.87e-14!129;UBERON:0004185!1.87e-14!129;UBERON:0002365!3.56e-12!31;UBERON:0002330!3.56e-12!31;UBERON:0000077!1.01e-11!130;UBERON:0002110!5.44e-11!3;UBERON:0006242!5.44e-11!3;UBERON:0005409!1.13e-09!35;UBERON:0001041!1.58e-09!98;UBERON:0005177!2.88e-09!107;UBERON:0002368!9.59e-09!35;UBERON:0009569!1.62e-08!113;UBERON:0002394!2.10e-08!4;UBERON:0003928!2.10e-08!4;UBERON:0000160!5.60e-07!27;UBERON:0001155!9.55e-07!9 | |ontology_enrichment_uberon=UBERON:0009497!1.51e-33!25;UBERON:0000015!1.51e-33!25;UBERON:0002423!1.51e-33!25;UBERON:0006235!1.51e-33!25;UBERON:0004161!1.51e-33!25;UBERON:0008835!1.63e-25!22;UBERON:0003894!1.63e-25!22;UBERON:0009854!2.89e-24!23;UBERON:0007499!4.55e-22!25;UBERON:0009856!4.27e-21!26;UBERON:0003929!1.76e-19!54;UBERON:0002107!6.48e-18!19;UBERON:0006925!6.48e-18!19;UBERON:0008836!6.48e-18!19;UBERON:0002294!2.48e-17!7;UBERON:0001173!2.48e-17!7;UBERON:0004912!2.48e-17!7;UBERON:0005172!1.47e-16!55;UBERON:0005173!1.47e-16!55;UBERON:0005911!1.77e-15!82;UBERON:0001007!2.30e-15!155;UBERON:0001555!2.30e-15!155;UBERON:0007026!2.30e-15!155;UBERON:0005057!5.75e-15!26;UBERON:0004119!1.63e-14!169;UBERON:0000925!1.63e-14!169;UBERON:0006595!1.63e-14!169;UBERON:0002417!1.73e-14!61;UBERON:0000916!1.73e-14!61;UBERON:0004921!1.87e-14!129;UBERON:0004185!1.87e-14!129;UBERON:0002365!3.56e-12!31;UBERON:0002330!3.56e-12!31;UBERON:0000077!1.01e-11!130;UBERON:0002110!5.44e-11!3;UBERON:0006242!5.44e-11!3;UBERON:0005409!1.13e-09!35;UBERON:0001041!1.58e-09!98;UBERON:0005177!2.88e-09!107;UBERON:0002368!9.59e-09!35;UBERON:0009569!1.62e-08!113;UBERON:0002394!2.10e-08!4;UBERON:0003928!2.10e-08!4;UBERON:0000160!5.60e-07!27;UBERON:0001155!9.55e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.89e-55;19!UBERON:0006925;3.89e-55;19!UBERON:0002423;7.72e-42;25!UBERON:0002365;2.13e-32;31!UBERON:0002330;2.13e-32;31!UBERON:0002368;6.95e-31;33!UBERON:0000949;5.35e-21;43!UBERON:0002417;1.50e-13;58!UBERON:0000916;1.50e-13;58!UBERON:0005172;1.72e-12;52!UBERON:0005173;1.72e-12;52!UBERON:0002530;1.89e-11;57!UBERON:0001007;2.32e-09;81!UBERON:0000160;8.08e-09;17!UBERON:0001155;3.07e-08;9!UBERON:0005409;5.09e-07;22!UBERON:0000059;6.74e-07;11 | |ontology_enrichment_uberon_v019=UBERON:0002107;3.89e-55;19!UBERON:0006925;3.89e-55;19!UBERON:0002423;7.72e-42;25!UBERON:0002365;2.13e-32;31!UBERON:0002330;2.13e-32;31!UBERON:0002368;6.95e-31;33!UBERON:0000949;5.35e-21;43!UBERON:0002417;1.50e-13;58!UBERON:0000916;1.50e-13;58!UBERON:0005172;1.72e-12;52!UBERON:0005173;1.72e-12;52!UBERON:0002530;1.89e-11;57!UBERON:0001007;2.32e-09;81!UBERON:0000160;8.08e-09;17!UBERON:0001155;3.07e-08;9!UBERON:0005409;5.09e-07;22!UBERON:0000059;6.74e-07;11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.89e-55,19;UBERON:0006925,3.89e-55,19;UBERON:0008836,3.89e-55,19;UBERON:0008835,1.39e-47,22;UBERON:0003894,1.39e-47,22;UBERON:0009854,1.68e-45,23;UBERON:0007499,7.73e-42,25;UBERON:0009497,7.73e-42,25;UBERON:0000015,7.73e-42,25;UBERON:0002423,7.73e-42,25;UBERON:0006235,7.73e-42,25;UBERON:0004161,7.73e-42,25;UBERON:0009856,3.23e-40,26;UBERON:0002365,1.12e-33,31;UBERON:0002330,1.12e-33,31;UBERON:0002368,8.69e-30,35;UBERON:0000949,4.45e-23,45;UBERON:0003929,3.71e-19,54;UBERON:0005172,3.71e-19,54;UBERON:0005173,3.71e-19,54;UBERON:0002530,1.71e-17,59;UBERON:0002417,3.42e-17,60;UBERON:0000916,3.42e-17,60;UBERON:0004921,5.24e-16,118;UBERON:0001007,6.89e-13,145;UBERON:0001555,6.89e-13,145;UBERON:0007026,6.89e-13,145;UBERON:0005911,1.95e-12,82;UBERON:0001041,1.09e-11,87;UBERON:0004119,1.33e-11,160;UBERON:0000925,1.33e-11,160;UBERON:0006595,1.33e-11,160;UBERON:0005177,5.49e-10,101;UBERON:0011216,1.33e-09,223;UBERON:0009569,6.05e-09,112;UBERON:0000160,7.65e-09,17;UBERON:0003914,1.55e-08,117;UBERON:0001155,2.85e-08,9;UBERON:0005256,3.70e-08,122;UBERON:0000059,6.35e-07,11 | |||
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|short_description=p3@TRIM15 | |short_description=p3@TRIM15 | ||
}} | }} |
Latest revision as of 15:52, 17 September 2015
Short description: | p3@TRIM15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TRIM15_5end |
Coexpression cluster: | [[Coexpression cluster:C304|]] |
Association with transcript: | 0bp_to_ENST00000376694, ENST00000376695, NM_033229, uc010jrx.2_5end |
EntrezGene: | TRIM15 |
HGNC: | 16284 |
UniProt: | Q9C019A6NN45Q5SRL0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 6.56e-67 | 12 |
endodermal cell | 1.19e-13 | 58 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 4.43e-07 | 39 |