FFCP PHASE1:Hg19::chr10:69926080..69926087,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:69926080..69926087,+ | |||
|coexpression_cluster_id=C69 | |coexpression_cluster_id=C69 | ||
|description=CAGE_peak_at_chr10:69926080..69926087,+ | |description=CAGE_peak_at_chr10:69926080..69926087,+ | ||
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|ontology_enrichment_celltype=CL:0002144!5.54e-19!3;CL:0002139!7.69e-14!24;CL:0000115!1.91e-13!35;CL:0002078!1.24e-10!44;CL:0005020!9.68e-10!6;CL:0002138!9.68e-10!6;CL:0005022!9.68e-10!6;CL:0000213!3.92e-08!57;CL:0000215!3.92e-08!57;CL:0000071!2.79e-07!18;CL:0002546!2.79e-07!18 | |ontology_enrichment_celltype=CL:0002144!5.54e-19!3;CL:0002139!7.69e-14!24;CL:0000115!1.91e-13!35;CL:0002078!1.24e-10!44;CL:0005020!9.68e-10!6;CL:0002138!9.68e-10!6;CL:0005022!9.68e-10!6;CL:0000213!3.92e-08!57;CL:0000215!3.92e-08!57;CL:0000071!2.79e-07!18;CL:0002546!2.79e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0002144;3.66e-23;3!CL:0002188;1.71e-14;5!CL:1000746;9.43e-11;7!CL:1000612;9.43e-11;7!CL:0002078;4.59e-07;45!CL:0002681;8.14e-07;12!CL:0002584;8.14e-07;12 | |ontology_enrichment_celltype_v019=CL:0002144;3.66e-23;3!CL:0002188;1.71e-14;5!CL:1000746;9.43e-11;7!CL:1000612;9.43e-11;7!CL:0002078;4.59e-07;45!CL:0002681;8.14e-07;12!CL:0002584;8.14e-07;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0002144,4.09e-23,3;CL:0002188,1.60e-14,5;CL:1000746,8.99e-11,7;CL:1000612,8.99e-11,7;CL:0000115,1.92e-08,36;CL:0002078,5.75e-07,45;CL:0002681,7.92e-07,12;CL:0002584,7.92e-07,12 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060058;5.73e-08;10 | |ontology_enrichment_disease_v019=DOID:0060058;5.73e-08;10 | ||
|ontology_enrichment_disease_v019_2=DOID:0060058,5.73e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0001915!5.54e-19!3;UBERON:0001982!5.54e-19!3;UBERON:0002134!7.13e-15!1;UBERON:0005208!7.13e-15!1;UBERON:0005946!7.13e-15!1;UBERON:0005965!7.13e-15!1;UBERON:0002078!7.13e-15!1;UBERON:0000055!6.34e-09!69;UBERON:0002081!4.38e-08!2;UBERON:0002133!4.38e-08!2;UBERON:0002049!1.02e-07!79;UBERON:0007798!1.02e-07!79;UBERON:0001473!1.60e-07!8;UBERON:0004536!1.60e-07!8;UBERON:0006558!1.60e-07!8;UBERON:0001986!2.79e-07!18;UBERON:0004638!2.79e-07!18;UBERON:0004852!2.79e-07!18;UBERON:0004535!5.91e-07!110;UBERON:0001009!9.52e-07!113 | |ontology_enrichment_uberon=UBERON:0001915!5.54e-19!3;UBERON:0001982!5.54e-19!3;UBERON:0002134!7.13e-15!1;UBERON:0005208!7.13e-15!1;UBERON:0005946!7.13e-15!1;UBERON:0005965!7.13e-15!1;UBERON:0002078!7.13e-15!1;UBERON:0000055!6.34e-09!69;UBERON:0002081!4.38e-08!2;UBERON:0002133!4.38e-08!2;UBERON:0002049!1.02e-07!79;UBERON:0007798!1.02e-07!79;UBERON:0001473!1.60e-07!8;UBERON:0004536!1.60e-07!8;UBERON:0006558!1.60e-07!8;UBERON:0001986!2.79e-07!18;UBERON:0004638!2.79e-07!18;UBERON:0004852!2.79e-07!18;UBERON:0004535!5.91e-07!110;UBERON:0001009!9.52e-07!113 | ||
|ontology_enrichment_uberon_v019=UBERON:0010523;3.66e-23;3!UBERON:0001915;3.66e-23;3!UBERON:0001982;3.66e-23;3!UBERON:0000074;9.43e-11;7!UBERON:0001229;9.43e-11;7!UBERON:0001225;8.14e-07;12!UBERON:0008987;8.14e-07;12 | |ontology_enrichment_uberon_v019=UBERON:0010523;3.66e-23;3!UBERON:0001915;3.66e-23;3!UBERON:0001982;3.66e-23;3!UBERON:0000074;9.43e-11;7!UBERON:0001229;9.43e-11;7!UBERON:0001225;8.14e-07;12!UBERON:0008987;8.14e-07;12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0010523,4.09e-23,3;UBERON:0001915,4.09e-23,3;UBERON:0001982,4.09e-23,3;UBERON:0010532,8.99e-11,7;UBERON:0000074,8.99e-11,7;UBERON:0001229,8.99e-11,7;UBERON:0001230,8.99e-11,7;UBERON:0003220,8.99e-11,7;UBERON:0005749,8.99e-11,7;UBERON:0004199,8.99e-11,7;UBERON:0004209,8.99e-11,7;UBERON:0004198,8.99e-11,7;UBERON:0005103,1.35e-09,8;UBERON:0000083,1.35e-09,8;UBERON:0009201,1.35e-09,8;UBERON:0006553,1.35e-09,8;UBERON:0003074,1.35e-09,8;UBERON:0003060,1.35e-09,8;UBERON:0000080,1.12e-08,9;UBERON:0002120,1.12e-08,9;UBERON:0004875,1.12e-08,9;UBERON:0005721,1.12e-08,9;UBERON:0005754,1.12e-08,9;UBERON:0007297,1.12e-08,9;UBERON:0004876,2.47e-07,11;UBERON:0001225,7.92e-07,12;UBERON:0008987,7.92e-07,12;UBERON:0003887,7.92e-07,12 | |||
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|short_description=p@chr10:69926080..69926087,+ | |short_description=p@chr10:69926080..69926087,+ | ||
}} | }} |
Latest revision as of 14:55, 23 July 2015
Short description: | p@chr10:69926080..69926087, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:69926080..69926087, + |
Coexpression cluster: | C69_anaplastic_CD14_cord_hairy_mycosis_adult_NK |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
capillary endothelial cell | 4.09e-23 | 3 |
glomerular endothelial cell | 1.60e-14 | 5 |
glomerular cell | 8.99e-11 | 7 |
kidney corpuscule cell | 8.99e-11 | 7 |
endothelial cell | 1.92e-08 | 36 |
meso-epithelial cell | 5.75e-07 | 45 |
kidney cortical cell | 7.92e-07 | 12 |
renal cortical epithelial cell | 7.92e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
microcirculatory vessel | 4.09e-23 | 3 |
endothelium of capillary | 4.09e-23 | 3 |
capillary | 4.09e-23 | 3 |
primitive nephron | 8.99e-11 | 7 |
renal glomerulus | 8.99e-11 | 7 |
renal corpuscle | 8.99e-11 | 7 |
glomerular capsule | 8.99e-11 | 7 |
metanephric mesenchyme | 8.99e-11 | 7 |
glomerular tuft | 8.99e-11 | 7 |
S-shaped body | 8.99e-11 | 7 |
renal vesicle | 8.99e-11 | 7 |
comma-shaped body | 8.99e-11 | 7 |
mesonephric epithelium | 1.35e-09 | 8 |
mesonephric tubule | 1.35e-09 | 8 |
nephric duct | 1.35e-09 | 8 |
renal duct | 1.35e-09 | 8 |
mesonephric duct | 1.35e-09 | 8 |
pronephric duct | 1.35e-09 | 8 |
mesonephros | 1.12e-08 | 9 |
pronephros | 1.12e-08 | 9 |
nephrogenic cord | 1.12e-08 | 9 |
pronephric mesoderm | 1.12e-08 | 9 |
rostral part of nephrogenic cord | 1.12e-08 | 9 |
presumptive pronephric mesoderm | 1.12e-08 | 9 |
urogenital ridge | 2.47e-07 | 11 |
cortex of kidney | 7.92e-07 | 12 |
renal parenchyma | 7.92e-07 | 12 |
intraembryonic coelom | 7.92e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 5.73e-08 | 10 |