FFCP PHASE1:Hg19::chr13:58206234..58206253,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27253 | |EntrezGene=27253 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14267 | |HGNC=14267 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=290bp_to_ENST00000484979_5end | |association_with_transcript=290bp_to_ENST00000484979_5end | ||
|cluster_id=chr13:58206234..58206253,+ | |||
|coexpression_cluster_id=C2267 | |coexpression_cluster_id=C2267 | ||
|description=CAGE_peak_5_at_PCDH17_5end | |description=CAGE_peak_5_at_PCDH17_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.14e-11;82 | |ontology_enrichment_development_v019=UBERON:0006601;1.14e-11;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:171;2.17e-07;10 | |ontology_enrichment_disease_v019=DOID:171;2.17e-07;10 | ||
|ontology_enrichment_disease_v019_2=DOID:171,1.56e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.28e-66!115;UBERON:0001049!4.99e-62!57;UBERON:0005068!4.99e-62!57;UBERON:0006241!4.99e-62!57;UBERON:0007135!4.99e-62!57;UBERON:0002346!1.56e-51!90;UBERON:0002616!3.51e-51!59;UBERON:0002020!3.31e-50!34;UBERON:0003528!3.31e-50!34;UBERON:0001893!3.37e-50!34;UBERON:0001017!1.13e-48!82;UBERON:0002780!1.30e-48!41;UBERON:0001890!1.30e-48!41;UBERON:0006240!1.30e-48!41;UBERON:0002791!1.94e-48!33;UBERON:0000955!4.18e-48!69;UBERON:0006238!4.18e-48!69;UBERON:0005743!1.46e-47!86;UBERON:0003075!1.49e-47!86;UBERON:0007284!1.49e-47!86;UBERON:0003080!3.31e-47!42;UBERON:0001869!1.36e-46!32;UBERON:0000073!9.80e-44!94;UBERON:0001016!9.80e-44!94;UBERON:0002619!2.20e-36!22;UBERON:0000956!4.51e-34!25;UBERON:0000203!4.51e-34!25;UBERON:0003056!9.12e-33!61;UBERON:0001950!1.16e-32!20;UBERON:0000153!4.54e-25!129;UBERON:0007811!4.54e-25!129;UBERON:0000033!1.58e-24!123;UBERON:0000924!6.20e-24!173;UBERON:0006601!6.20e-24!173;UBERON:0000025!2.18e-21!194;UBERON:0004121!2.39e-21!169;UBERON:0002420!7.57e-18!9;UBERON:0007245!7.57e-18!9;UBERON:0010009!7.57e-18!9;UBERON:0010011!7.57e-18!9;UBERON:0000454!7.57e-18!9;UBERON:0002308!1.27e-17!9;UBERON:0000125!1.27e-17!9;UBERON:0004111!2.45e-15!241;UBERON:0003076!2.48e-15!15;UBERON:0003057!2.48e-15!15;UBERON:0009663!3.07e-14!7;UBERON:0000477!1.35e-13!286;UBERON:0000483!7.67e-13!309;UBERON:0000119!1.53e-12!312;UBERON:0000064!3.79e-12!219;UBERON:0001871!2.85e-11!7;UBERON:0000200!3.57e-11!6;UBERON:0002298!3.98e-11!8;UBERON:0004733!6.27e-11!12;UBERON:0002028!6.27e-11!12;UBERON:0007277!6.27e-11!12;UBERON:0000349!9.50e-11!5;UBERON:0000475!1.72e-10!365;UBERON:0000922!3.32e-10!612;UBERON:0004732!6.14e-10!13;UBERON:0002021!6.29e-10!5;UBERON:0001872!1.22e-09!5;UBERON:0000481!3.34e-09!347;UBERON:0000062!7.70e-09!511;UBERON:0000369!8.13e-09!4;UBERON:0002435!8.13e-09!4;UBERON:0000204!8.13e-09!4;UBERON:0010082!8.13e-09!4;UBERON:0002050!4.64e-08!605;UBERON:0005423!4.64e-08!605;UBERON:0000923!1.25e-07!604;UBERON:0005291!1.25e-07!604;UBERON:0006598!1.25e-07!604;UBERON:0002532!1.25e-07!604;UBERON:0000468!1.29e-07!659;UBERON:0005383!4.81e-07!3;UBERON:0005382!4.81e-07!3;UBERON:0002680!6.21e-07!9;UBERON:0001895!6.21e-07!9;UBERON:0010092!6.21e-07!9;UBERON:0006331!6.70e-07!3 | |ontology_enrichment_uberon=UBERON:0007023!5.28e-66!115;UBERON:0001049!4.99e-62!57;UBERON:0005068!4.99e-62!57;UBERON:0006241!4.99e-62!57;UBERON:0007135!4.99e-62!57;UBERON:0002346!1.56e-51!90;UBERON:0002616!3.51e-51!59;UBERON:0002020!3.31e-50!34;UBERON:0003528!3.31e-50!34;UBERON:0001893!3.37e-50!34;UBERON:0001017!1.13e-48!82;UBERON:0002780!1.30e-48!41;UBERON:0001890!1.30e-48!41;UBERON:0006240!1.30e-48!41;UBERON:0002791!1.94e-48!33;UBERON:0000955!4.18e-48!69;UBERON:0006238!4.18e-48!69;UBERON:0005743!1.46e-47!86;UBERON:0003075!1.49e-47!86;UBERON:0007284!1.49e-47!86;UBERON:0003080!3.31e-47!42;UBERON:0001869!1.36e-46!32;UBERON:0000073!9.80e-44!94;UBERON:0001016!9.80e-44!94;UBERON:0002619!2.20e-36!22;UBERON:0000956!4.51e-34!25;UBERON:0000203!4.51e-34!25;UBERON:0003056!9.12e-33!61;UBERON:0001950!1.16e-32!20;UBERON:0000153!4.54e-25!129;UBERON:0007811!4.54e-25!129;UBERON:0000033!1.58e-24!123;UBERON:0000924!6.20e-24!173;UBERON:0006601!6.20e-24!173;UBERON:0000025!2.18e-21!194;UBERON:0004121!2.39e-21!169;UBERON:0002420!7.57e-18!9;UBERON:0007245!7.57e-18!9;UBERON:0010009!7.57e-18!9;UBERON:0010011!7.57e-18!9;UBERON:0000454!7.57e-18!9;UBERON:0002308!1.27e-17!9;UBERON:0000125!1.27e-17!9;UBERON:0004111!2.45e-15!241;UBERON:0003076!2.48e-15!15;UBERON:0003057!2.48e-15!15;UBERON:0009663!3.07e-14!7;UBERON:0000477!1.35e-13!286;UBERON:0000483!7.67e-13!309;UBERON:0000119!1.53e-12!312;UBERON:0000064!3.79e-12!219;UBERON:0001871!2.85e-11!7;UBERON:0000200!3.57e-11!6;UBERON:0002298!3.98e-11!8;UBERON:0004733!6.27e-11!12;UBERON:0002028!6.27e-11!12;UBERON:0007277!6.27e-11!12;UBERON:0000349!9.50e-11!5;UBERON:0000475!1.72e-10!365;UBERON:0000922!3.32e-10!612;UBERON:0004732!6.14e-10!13;UBERON:0002021!6.29e-10!5;UBERON:0001872!1.22e-09!5;UBERON:0000481!3.34e-09!347;UBERON:0000062!7.70e-09!511;UBERON:0000369!8.13e-09!4;UBERON:0002435!8.13e-09!4;UBERON:0000204!8.13e-09!4;UBERON:0010082!8.13e-09!4;UBERON:0002050!4.64e-08!605;UBERON:0005423!4.64e-08!605;UBERON:0000923!1.25e-07!604;UBERON:0005291!1.25e-07!604;UBERON:0006598!1.25e-07!604;UBERON:0002532!1.25e-07!604;UBERON:0000468!1.29e-07!659;UBERON:0005383!4.81e-07!3;UBERON:0005382!4.81e-07!3;UBERON:0002680!6.21e-07!9;UBERON:0001895!6.21e-07!9;UBERON:0010092!6.21e-07!9;UBERON:0006331!6.70e-07!3 | ||
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|short_description=p5@PCDH17 | |short_description=p5@PCDH17 | ||
}} | }} |
Latest revision as of 20:15, 17 September 2015
Short description: | p5@PCDH17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PCDH17_5end |
Coexpression cluster: | C2267_neuroblastoma_spleen_amygdala_neuroectodermal_lung_occipital_parietal |
Association with transcript: | 290bp_to_ENST00000484979_5end |
EntrezGene: | PCDH17 |
HGNC: | 14267 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.56e-07 | 10 |