FFCP PHASE1:Hg19::chr20:58179950..58179977,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=116154 | |EntrezGene=116154 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15833 | |HGNC=15833 | ||
|TSSclassifier=strong | |||
|UniProt=Q96KR7 | |UniProt=Q96KR7 | ||
|association_with_transcript=347bp_to_ENST00000371015,ENST00000395639,NM_080672,uc002yau.2_5end | |association_with_transcript=347bp_to_ENST00000371015,ENST00000395639,NM_080672,uc002yau.2_5end | ||
|cluster_id=chr20:58179950..58179977,+ | |||
|coexpression_cluster_id=C4 | |coexpression_cluster_id=C4 | ||
|description=CAGE_peak_5_at_PHACTR3_5end | |description=CAGE_peak_5_at_PHACTR3_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.03e-21;82!UBERON:0006215;1.42e-09;3!UBERON:0006241;1.70e-09;3!UBERON:0003057;1.70e-09;3!UBERON:0010122;5.42e-07;2 | |ontology_enrichment_development_v019=UBERON:0006601;1.03e-21;82!UBERON:0006215;1.42e-09;3!UBERON:0006241;1.70e-09;3!UBERON:0003057;1.70e-09;3!UBERON:0010122;5.42e-07;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.90e-78!57;UBERON:0005068!1.90e-78!57;UBERON:0006241!1.90e-78!57;UBERON:0007135!1.90e-78!57;UBERON:0000073!1.07e-73!94;UBERON:0001016!1.07e-73!94;UBERON:0001017!4.66e-73!82;UBERON:0005743!1.87e-71!86;UBERON:0002616!1.14e-65!59;UBERON:0000955!8.00e-62!69;UBERON:0006238!8.00e-62!69;UBERON:0002780!1.07e-59!41;UBERON:0001890!1.07e-59!41;UBERON:0006240!1.07e-59!41;UBERON:0003075!3.18e-58!86;UBERON:0007284!3.18e-58!86;UBERON:0003080!4.99e-58!42;UBERON:0002346!3.95e-57!90;UBERON:0007023!1.62e-54!115;UBERON:0001893!1.02e-53!34;UBERON:0002020!1.78e-53!34;UBERON:0003528!1.78e-53!34;UBERON:0002791!9.00e-52!33;UBERON:0001869!2.13e-49!32;UBERON:0003056!8.89e-39!61;UBERON:0002619!1.13e-38!22;UBERON:0000924!1.32e-37!173;UBERON:0006601!1.32e-37!173;UBERON:0004121!1.53e-37!169;UBERON:0000956!2.03e-36!25;UBERON:0000203!2.03e-36!25;UBERON:0001950!1.12e-34!20;UBERON:0000153!5.69e-32!129;UBERON:0007811!5.69e-32!129;UBERON:0000033!1.73e-31!123;UBERON:0003076!1.74e-20!15;UBERON:0003057!1.74e-20!15;UBERON:0002420!1.53e-18!9;UBERON:0007245!1.53e-18!9;UBERON:0010009!1.53e-18!9;UBERON:0010011!1.53e-18!9;UBERON:0000454!1.53e-18!9;UBERON:0002308!1.70e-18!9;UBERON:0000125!1.70e-18!9;UBERON:0004732!1.92e-17!13;UBERON:0000025!4.11e-17!194;UBERON:0004733!1.79e-15!12;UBERON:0002028!1.79e-15!12;UBERON:0007277!1.79e-15!12;UBERON:0009663!9.54e-15!7;UBERON:0001871!2.29e-13!7;UBERON:0000200!3.33e-13!6;UBERON:0002298!9.40e-13!8;UBERON:0001872!2.32e-11!5;UBERON:0000349!2.92e-11!5;UBERON:0004111!5.09e-11!241;UBERON:0000064!6.56e-11!219;UBERON:0002680!2.07e-10!9;UBERON:0001895!2.07e-10!9;UBERON:0010092!2.07e-10!9;UBERON:0000477!9.08e-10!286;UBERON:0000483!1.28e-09!309;UBERON:0000119!2.21e-09!312;UBERON:0000369!1.10e-08!4;UBERON:0002435!1.10e-08!4;UBERON:0000204!1.10e-08!4;UBERON:0010082!1.10e-08!4;UBERON:0002021!1.06e-07!5;UBERON:0001894!1.25e-07!7;UBERON:0006222!1.25e-07!7;UBERON:0006331!1.37e-07!3;UBERON:0002771!1.66e-07!3;UBERON:0000988!2.76e-07!3;UBERON:0001896!5.60e-07!3;UBERON:0005290!5.60e-07!3;UBERON:0010096!5.60e-07!3;UBERON:0005383!7.30e-07!3;UBERON:0005382!7.30e-07!3;UBERON:0002240!8.76e-07!3 | |ontology_enrichment_uberon=UBERON:0001049!1.90e-78!57;UBERON:0005068!1.90e-78!57;UBERON:0006241!1.90e-78!57;UBERON:0007135!1.90e-78!57;UBERON:0000073!1.07e-73!94;UBERON:0001016!1.07e-73!94;UBERON:0001017!4.66e-73!82;UBERON:0005743!1.87e-71!86;UBERON:0002616!1.14e-65!59;UBERON:0000955!8.00e-62!69;UBERON:0006238!8.00e-62!69;UBERON:0002780!1.07e-59!41;UBERON:0001890!1.07e-59!41;UBERON:0006240!1.07e-59!41;UBERON:0003075!3.18e-58!86;UBERON:0007284!3.18e-58!86;UBERON:0003080!4.99e-58!42;UBERON:0002346!3.95e-57!90;UBERON:0007023!1.62e-54!115;UBERON:0001893!1.02e-53!34;UBERON:0002020!1.78e-53!34;UBERON:0003528!1.78e-53!34;UBERON:0002791!9.00e-52!33;UBERON:0001869!2.13e-49!32;UBERON:0003056!8.89e-39!61;UBERON:0002619!1.13e-38!22;UBERON:0000924!1.32e-37!173;UBERON:0006601!1.32e-37!173;UBERON:0004121!1.53e-37!169;UBERON:0000956!2.03e-36!25;UBERON:0000203!2.03e-36!25;UBERON:0001950!1.12e-34!20;UBERON:0000153!5.69e-32!129;UBERON:0007811!5.69e-32!129;UBERON:0000033!1.73e-31!123;UBERON:0003076!1.74e-20!15;UBERON:0003057!1.74e-20!15;UBERON:0002420!1.53e-18!9;UBERON:0007245!1.53e-18!9;UBERON:0010009!1.53e-18!9;UBERON:0010011!1.53e-18!9;UBERON:0000454!1.53e-18!9;UBERON:0002308!1.70e-18!9;UBERON:0000125!1.70e-18!9;UBERON:0004732!1.92e-17!13;UBERON:0000025!4.11e-17!194;UBERON:0004733!1.79e-15!12;UBERON:0002028!1.79e-15!12;UBERON:0007277!1.79e-15!12;UBERON:0009663!9.54e-15!7;UBERON:0001871!2.29e-13!7;UBERON:0000200!3.33e-13!6;UBERON:0002298!9.40e-13!8;UBERON:0001872!2.32e-11!5;UBERON:0000349!2.92e-11!5;UBERON:0004111!5.09e-11!241;UBERON:0000064!6.56e-11!219;UBERON:0002680!2.07e-10!9;UBERON:0001895!2.07e-10!9;UBERON:0010092!2.07e-10!9;UBERON:0000477!9.08e-10!286;UBERON:0000483!1.28e-09!309;UBERON:0000119!2.21e-09!312;UBERON:0000369!1.10e-08!4;UBERON:0002435!1.10e-08!4;UBERON:0000204!1.10e-08!4;UBERON:0010082!1.10e-08!4;UBERON:0002021!1.06e-07!5;UBERON:0001894!1.25e-07!7;UBERON:0006222!1.25e-07!7;UBERON:0006331!1.37e-07!3;UBERON:0002771!1.66e-07!3;UBERON:0000988!2.76e-07!3;UBERON:0001896!5.60e-07!3;UBERON:0005290!5.60e-07!3;UBERON:0010096!5.60e-07!3;UBERON:0005383!7.30e-07!3;UBERON:0005382!7.30e-07!3;UBERON:0002240!8.76e-07!3 | ||
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|short_description=p5@PHACTR3 | |short_description=p5@PHACTR3 | ||
}} | }} |
Latest revision as of 07:53, 17 September 2015
Short description: | p5@PHACTR3 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PHACTR3_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 347bp_to_ENST00000371015, ENST00000395639, NM_080672, uc002yau.2_5end |
EntrezGene: | PHACTR3 |
HGNC: | 15833 |
UniProt: | Q96KR7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data