FFCP PHASE1:Hg19::chr1:161193408..161193424,-: Difference between revisions
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|id=chr1:161193408..161193424,-
|short_description=p1@APOA2
|description=CAGE_peak_1_at_APOA2_5end
|association_with_transcript=0bp_to_ENST00000367990,ENST000004638...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=336 | |EntrezGene=336 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=601 | |HGNC=601 | ||
|TSSclassifier=strong | |||
|UniProt=P02652 | |UniProt=P02652 | ||
|association_with_transcript=0bp_to_ENST00000367990,ENST00000463812,ENST00000468465,ENST00000470459,NM_001643,uc001fzc.1_5end | |||
|cluster_id=chr1:161193408..161193424,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_APOA2_5end | |||
|id=chr1:161193408..161193424,- | |||
|ontology_enrichment_celltype=CL:0000039!7.16e-16!7;CL:0000586!7.16e-16!7;CL:0000181!2.47e-14!12;CL:0000417!2.47e-14!12;CL:0000668!2.47e-14!12;CL:0000414!2.47e-14!12;CL:0000412!2.47e-14!12;CL:0000182!2.47e-14!12;CL:0002322!1.77e-13!5 | |||
|ontology_enrichment_celltype_v019=CL:0000182;7.69e-25;12!CL:0002322;6.20e-15;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,7.35e-25,12;CL:0002322,5.16e-15,5;CL:0000223,6.73e-08,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;9.21e-21;11!UBERON:0003104;5.04e-19;31!UBERON:0009497;2.04e-17;13!UBERON:0001041;6.17e-09;30 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;7.01e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,6.40e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0005057!6.27e-18!26;UBERON:0002107!3.21e-16!19;UBERON:0006925!3.21e-16!19;UBERON:0008836!3.21e-16!19;UBERON:0009854!3.07e-15!23;UBERON:0002368!5.59e-14!35;UBERON:0009497!1.09e-13!25;UBERON:0000015!1.09e-13!25;UBERON:0002423!1.09e-13!25;UBERON:0006235!1.09e-13!25;UBERON:0004161!1.09e-13!25;UBERON:0008835!1.26e-13!22;UBERON:0003894!1.26e-13!22;UBERON:0003929!2.84e-13!54;UBERON:0009856!4.00e-13!26;UBERON:0000949!5.82e-13!45;UBERON:0007499!1.16e-11!25;UBERON:0005172!5.13e-10!55;UBERON:0005173!5.13e-10!55;UBERON:0003135!5.52e-10!11;UBERON:0002365!6.84e-09!31;UBERON:0002330!6.84e-09!31;UBERON:0004907!1.25e-08!5;UBERON:0002417!1.30e-08!61;UBERON:0000916!1.30e-08!61;UBERON:0005911!5.08e-08!82;UBERON:0002530!6.54e-08!59;UBERON:0000473!2.54e-07!8;UBERON:0004921!4.19e-07!129;UBERON:0004185!4.19e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;7.40e-29;19!UBERON:0006925;7.40e-29;19!UBERON:0002423;2.26e-21;25!UBERON:0002368;9.72e-17;33!UBERON:0002365;1.72e-16;31!UBERON:0002330;1.72e-16;31!UBERON:0001052;9.05e-11;4!UBERON:0000949;1.16e-10;43!UBERON:0000922;2.81e-09;49!UBERON:0005172;5.04e-09;52!UBERON:0005173;5.04e-09;52!UBERON:0004907;1.04e-08;5!UBERON:0000160;1.51e-08;17!UBERON:0001007;2.28e-08;81!UBERON:0002530;4.09e-07;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,7.11e-29,19;UBERON:0006925,7.11e-29,19;UBERON:0008836,7.11e-29,19;UBERON:0008835,1.28e-24,22;UBERON:0003894,1.28e-24,22;UBERON:0009854,1.90e-23,23;UBERON:0007499,2.19e-21,25;UBERON:0009497,2.19e-21,25;UBERON:0000015,2.19e-21,25;UBERON:0002423,2.19e-21,25;UBERON:0006235,2.19e-21,25;UBERON:0004161,2.19e-21,25;UBERON:0009856,1.79e-20,26;UBERON:0002368,2.68e-17,35;UBERON:0002365,8.50e-17,31;UBERON:0002330,8.50e-17,31;UBERON:0003929,1.25e-16,54;UBERON:0005172,2.62e-14,54;UBERON:0005173,2.62e-14,54;UBERON:0000949,7.00e-13,45;UBERON:0002417,1.45e-12,60;UBERON:0000916,1.45e-12,60;UBERON:0004921,1.81e-12,118;UBERON:0005911,3.22e-11,82;UBERON:0002530,5.82e-11,59;UBERON:0001052,1.05e-10,4;UBERON:0001007,2.75e-09,145;UBERON:0001555,2.75e-09,145;UBERON:0007026,2.75e-09,145;UBERON:0004907,1.18e-08,5;UBERON:0000160,1.51e-08,17;UBERON:0004119,5.42e-08,160;UBERON:0000925,5.42e-08,160;UBERON:0006595,5.42e-08,160;UBERON:0005409,1.01e-07,25;UBERON:0001041,1.19e-07,87;UBERON:0005177,2.93e-07,101 | |||
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| ||
|short_description=p1@APOA2 | |||
}} | }} |
Latest revision as of 05:37, 18 September 2015
Short description: | p1@APOA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_APOA2_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000367990, ENST00000463812, ENST00000468465, ENST00000470459, NM_001643, uc001fzc.1_5end |
EntrezGene: | APOA2 |
HGNC: | 601 |
UniProt: | P02652 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 7.35e-25 | 12 |
embryonic stem cell | 5.16e-15 | 5 |
endodermal cell | 6.73e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
heart disease | 6.40e-10 | 2 |