FFCP PHASE1:Hg19::chr19:4910143..4910175,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29128 | |EntrezGene=29128 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=12556 | |HGNC=12556 | ||
|TSSclassifier=strong | |||
|UniProt=Q96T88 | |UniProt=Q96T88 | ||
|association_with_transcript=-16bp_to_ENST00000455180,uc010duf.2_5end | |association_with_transcript=-16bp_to_ENST00000455180,uc010duf.2_5end | ||
|cluster_id=chr19:4910143..4910175,+ | |||
|coexpression_cluster_id=C3809 | |coexpression_cluster_id=C3809 | ||
|description=CAGE_peak_2_at_UHRF1_5end | |description=CAGE_peak_2_at_UHRF1_5end | ||
|id=chr19:4910143..4910175,+ | |id=chr19:4910143..4910175,+ | ||
|ontology_enrichment_celltype=CL:1000449;1.43e-08;15!CL:1000497;8.98e-08;17!CL:0002518;8.98e-08;17!CL:0002681;6.06e-07;12!CL:0002584;6.06e-07;12!CL:1000507;8.58e-07;10!CL:1000494;8.58e-07;10!CL:0002319;9.35e-07;25 | |ontology_enrichment_celltype=CL:0000012!9.96e-19!682;CL:0000548!1.74e-18!679;CL:0000004!1.74e-18!679;CL:0000255!1.74e-18!679;CL:0000055!8.49e-18!180;CL:0000003!3.58e-13!722;CL:0000144!8.88e-13!625;CL:0002371!2.96e-11!591;CL:0000057!1.30e-10!75;CL:0002321!7.61e-10!248;CL:0000220!1.26e-09!246;CL:0000066!7.36e-08!254;CL:1000449!1.17e-07!16;CL:0000221!1.37e-07!71;CL:0002319!2.80e-07!25;CL:0000133!3.62e-07!59;CL:1000497!3.85e-07!18;CL:0002518!3.85e-07!18;CL:0000333!5.18e-07!41;CL:0000095!8.36e-07!17;CL:0000123!8.36e-07!17 | ||
| | |ontology_enrichment_celltype_v019=CL:1000449;1.43e-08;15!CL:1000497;8.98e-08;17!CL:0002518;8.98e-08;17!CL:0002681;6.06e-07;12!CL:0002584;6.06e-07;12!CL:1000507;8.58e-07;10!CL:1000494;8.58e-07;10!CL:0002319;9.35e-07;25 | ||
|ontology_enrichment_disease=DOID:8692;2.08e-15;31!DOID:1240;4.35e-15;39!DOID:2531;6.90e-13;51!DOID:0060083;6.90e-13;51 | |ontology_enrichment_celltype_v019_2=CL:0000057,8.72e-10,76;CL:1000449,1.51e-08,15;CL:0002321,5.44e-08,250;CL:1000497,9.88e-08,17;CL:0002518,9.88e-08,17;CL:0002319,4.59e-07,25;CL:0002681,6.71e-07,12;CL:0002584,6.71e-07,12;CL:0002620,7.31e-07,23;CL:0000333,8.11e-07,41;CL:1000507,8.64e-07,10;CL:1000494,8.64e-07,10 | ||
|ontology_enrichment_uberon=UBERON:0006555;1.43e-08;15!UBERON:0004819;1.43e-08;15!UBERON:0001285;1.43e-08;15!UBERON:0007684;1.43e-08;15!UBERON:0001801;1.74e-07;14!UBERON:0000019;2.04e-07;19!UBERON:0000047;2.04e-07;19!UBERON:0004088;2.04e-07;19!UBERON:0010230;2.04e-07;19!UBERON:0001851;3.35e-07;15!UBERON:0000353;5.29e-07;15!UBERON:0001225;6.06e-07;12!UBERON:0008987;6.06e-07;12!UBERON:0004211;8.58e-07;10!UBERON:0009773;8.58e-07;10!UBERON:0001231;8.58e-07;10!UBERON:0004810;8.58e-07;10 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2531!4.85e-19!51;DOID:0060083!4.85e-19!51;DOID:1240!5.58e-18!39;DOID:162!1.22e-17!235;DOID:14566!2.30e-17!239;DOID:8692!4.30e-15!31;DOID:0050686!6.06e-11!137 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.08e-15;31!DOID:1240;4.35e-15;39!DOID:2531;6.90e-13;51!DOID:0060083;6.90e-13;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.43e-20,51;DOID:0060083,2.43e-20,51;DOID:1240,5.43e-19,39;DOID:8692,6.32e-16,31;DOID:162,6.81e-16,235;DOID:14566,1.82e-15,239;DOID:0050686,1.97e-09,137 | |||
|ontology_enrichment_uberon=UBERON:0004211!1.17e-07!16;UBERON:0001285!1.17e-07!16;UBERON:0007684!1.17e-07!16;UBERON:0003220!1.17e-07!16;UBERON:0004208!1.17e-07!16;UBERON:0001801!4.09e-07!14;UBERON:0000019!4.97e-07!19;UBERON:0000047!4.97e-07!19;UBERON:0004088!4.97e-07!19;UBERON:0003072!4.97e-07!19;UBERON:0003071!4.97e-07!19;UBERON:0004128!4.97e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;1.43e-08;15!UBERON:0004819;1.43e-08;15!UBERON:0001285;1.43e-08;15!UBERON:0007684;1.43e-08;15!UBERON:0001801;1.74e-07;14!UBERON:0000019;2.04e-07;19!UBERON:0000047;2.04e-07;19!UBERON:0004088;2.04e-07;19!UBERON:0010230;2.04e-07;19!UBERON:0001851;3.35e-07;15!UBERON:0000353;5.29e-07;15!UBERON:0001225;6.06e-07;12!UBERON:0008987;6.06e-07;12!UBERON:0004211;8.58e-07;10!UBERON:0009773;8.58e-07;10!UBERON:0001231;8.58e-07;10!UBERON:0004810;8.58e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,1.51e-08,15;UBERON:0009773,1.51e-08,15;UBERON:0001231,1.51e-08,15;UBERON:0001285,1.51e-08,15;UBERON:0007684,1.51e-08,15;UBERON:0004208,1.51e-08,15;UBERON:0006555,1.72e-07,16;UBERON:0004819,1.72e-07,16;UBERON:0001801,1.85e-07,14;UBERON:0000019,4.34e-07,20;UBERON:0000047,4.34e-07,20;UBERON:0010312,4.34e-07,20;UBERON:0004088,4.34e-07,20;UBERON:0010230,4.34e-07,20;UBERON:0003072,4.34e-07,20;UBERON:0004128,4.34e-07,20;UBERON:0003071,4.34e-07,20;UBERON:0001851,5.62e-07,15;UBERON:0001225,6.71e-07,12;UBERON:0008987,6.71e-07,12;UBERON:0000353,6.76e-07,15;UBERON:0004810,8.64e-07,10 | |||
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| ||
|short_description=p2@UHRF1 | |short_description=p2@UHRF1 | ||
}} | }} |
Latest revision as of 03:08, 19 September 2015
Short description: | p2@UHRF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_UHRF1_5end |
Coexpression cluster: | C3809_granulocyte_Astrocyte_Trabecular_acute_Meningeal_Renal_Myoblast |
Association with transcript: | -16bp_to_ENST00000455180, uc010duf.2_5end |
EntrezGene: | UHRF1 |
HGNC: | 12556 |
UniProt: | Q96T88 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 8.72e-10 | 76 |
epithelial cell of nephron | 1.51e-08 | 15 |
embryonic cell | 5.44e-08 | 250 |
kidney cell | 9.88e-08 | 17 |
kidney epithelial cell | 9.88e-08 | 17 |
neural cell | 4.59e-07 | 25 |
kidney cortical cell | 6.71e-07 | 12 |
renal cortical epithelial cell | 6.71e-07 | 12 |
skin fibroblast | 7.31e-07 | 23 |
migratory neural crest cell | 8.11e-07 | 41 |
kidney tubule cell | 8.64e-07 | 10 |
nephron tubule epithelial cell | 8.64e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
nephron epithelium | 1.51e-08 | 15 |
renal tubule | 1.51e-08 | 15 |
nephron tubule | 1.51e-08 | 15 |
nephron | 1.51e-08 | 15 |
uriniferous tubule | 1.51e-08 | 15 |
nephrogenic mesenchyme | 1.51e-08 | 15 |
excretory tube | 1.72e-07 | 16 |
kidney epithelium | 1.72e-07 | 16 |
anterior segment of eyeball | 1.85e-07 | 14 |
camera-type eye | 4.34e-07 | 20 |
simple eye | 4.34e-07 | 20 |
immature eye | 4.34e-07 | 20 |
ocular region | 4.34e-07 | 20 |
eyeball of camera-type eye | 4.34e-07 | 20 |
optic cup | 4.34e-07 | 20 |
optic vesicle | 4.34e-07 | 20 |
eye primordium | 4.34e-07 | 20 |
cortex | 5.62e-07 | 15 |
cortex of kidney | 6.71e-07 | 12 |
renal parenchyma | 6.71e-07 | 12 |
parenchyma | 6.76e-07 | 15 |
nephron tubule epithelium | 8.64e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.43e-20 | 51 |
immune system cancer | 2.43e-20 | 51 |
leukemia | 5.43e-19 | 39 |
myeloid leukemia | 6.32e-16 | 31 |
cancer | 6.81e-16 | 235 |
disease of cellular proliferation | 1.82e-15 | 239 |
organ system cancer | 1.97e-09 | 137 |