FF:10183-103D3: Difference between revisions
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{{f5samples | {{f5samples | ||
|DRA_sample_Accession=CAGE@SAMD00005572 | |||
|accession_numbers=CAGE;DRX008684;DRR009556;DRZ000981;DRZ002366;DRZ012331;DRZ013716 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0000955,UBERON:0001871,UBERON:0000200,UBERON:0002771,UBERON:0000956,UBERON:0000479,UBERON:0004121,UBERON:0000064,UBERON:0010314,UBERON:0011216,UBERON:0000062,UBERON:0000061,UBERON:0000465,UBERON:0000481,UBERON:0000073,UBERON:0000477,UBERON:0003528,UBERON:0002791,UBERON:0000467,UBERON:0002619,UBERON:0001062,UBERON:0000480,UBERON:0002616,UBERON:0002780,UBERON:0002020,UBERON:0010317,UBERON:0001017,UBERON:0001016,UBERON:0001869,UBERON:0001893,UBERON:0001890,UBERON:0000203,UBERON:0001950 | |ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0000955,UBERON:0001871,UBERON:0000200,UBERON:0002771,UBERON:0000956,UBERON:0000479,UBERON:0004121,UBERON:0000064,UBERON:0010314,UBERON:0011216,UBERON:0000062,UBERON:0000061,UBERON:0000465,UBERON:0000481,UBERON:0000073,UBERON:0000477,UBERON:0003528,UBERON:0002791,UBERON:0000467,UBERON:0002619,UBERON:0001062,UBERON:0000480,UBERON:0002616,UBERON:0002780,UBERON:0002020,UBERON:0010317,UBERON:0001017,UBERON:0001016,UBERON:0001869,UBERON:0001893,UBERON:0001890,UBERON:0000203,UBERON:0001950 | ||
|ancestors_in_cell_lineage_facet= | |ancestors_in_cell_lineage_facet= | ||
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|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|datafreeze_phase= | |data_phase=2 | ||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score=chr7:100065686..100065701,-!p2@TSC22D4!2.48!297.87!TSC22D4;;chr9:77112244..77112262,+!p1@RORB!2.37!258.82!RORB;;chr21:34442439..34442455,+!p1@OLIG1!2.37!235.63!OLIG1;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!2.12!131.06!PEG3;;chr9:114287433..114287513,+!p1@ZNF483!2.10!309.95!ZNF483;;chr2:162272785..162272836,+!p1@TBR1!2.02!102.99!TBR1;;chr17:53342311..53342400,+!p1@HLF!2.00!113.73!HLF;;chr2:2334997..2335053,-!p1@MYT1L!1.97!92.86!MYT1L;;chr4:57547454..57547469,-!p1@HOPX!1.93!84.56!HOPX;;chr17:38821373..38821440,-!p1@KRT222,p2@SMARCE1!1.91!80.90!SMARCE1;;chr5:88178983..88179012,-!p1@MEF2C!1.89!552.41!MEF2C;;chrX:25034067..25034088,-!p1@ARX!1.83!66.87!ARX;;chr3:181429704..181429722,+!p1@SOX2!1.82!64.43!SOX2;;chr14:29235961..29236008,+!p1@FOXG1!1.81!64.19!FOXG1;;chr4:81118647..81118666,+!p1@PRDM8!1.79!79.93!PRDM8;;chr15:80735246..80735321,+!p3@ARNT2!1.79!61.26!ARNT2;;chr15:80733570..80733659,+!p2@ARNT2!1.78!59.91!ARNT2;;chr10:64134120..64134183,+!p1@ZNF365!1.77!68.70!ZNF365;;chr7:31380292..31380351,-!p1@NEUROD6!1.76!56.86!NEUROD6;;chr2:95963052..95963106,+!p1@KCNIP3!1.74!53.69!KCNIP3;;chr17:37764128..37764258,-!p1@NEUROD2!1.70!48.81!NEUROD2;;chr8:40755333..40755352,-!p1@ZMAT4!1.69!47.96!ZMAT4;;chr2:60781201..60781258,-!p3@BCL11A!1.68!46.74!BCL11A;;chr18:53070846..53070902,-!p6@TCF4!1.68!46.37!TCF4;;chr21:34442540..34442560,+!p2@OLIG1!1.67!45.76!OLIG1;;chr2:166326200..166326216,+!p1@CSRNP3!1.66!64.06!CSRNP3;;chr5:88179017..88179046,-!p2@MEF2C!1.63!160.22!MEF2C;;chr11:61520075..61520136,+!p1@C11orf9!1.63!85.05!C11orf9;;chrX:85969626..85969664,+!p1@DACH2!1.63!41.37!DACH2;;chr2:145277882..145277967,-!p3@ZEB2!1.61!67.36!ZEB2;;chr10:48355030..48355090,+!p1@ZNF488!1.61!50.76!ZNF488;;chr2:105470562..105470582,+!p@chr2:105470562..105470582,+!1.60!38.68!POU3F3;;chr22:38380543..38380569,-!p1@SOX10!1.59!37.58!SOX10;;chr9:126774018..126774055,+!p1@LHX2!1.58!36.73!LHX2;;chr14:29234581..29234601,+!p2@FOXG1!1.57!35.75!FOXG1;;chr8:53322304..53322340,-!p1@ST18!1.56!34.90!ST18;;chr10:119302232..119302265,+!p1@EMX2!1.54!33.68!EMX2;;chr4:57522166..57522260,-!p2@HOPX!1.53!38.07!HOPX;;chr21:34398234..34398250,+!p1@OLIG2!1.52!31.85!OLIG2;;chr7:63505799..63505904,+!p1@ZNF727!1.51!31.48!ZNF727;;chr12:106976678..106976708,+!p2@RFX4!1.50!30.87!RFX4;;chr19:13135582..13135600,+!p3@NFIX!1.50!30.26!NFIX;;chr3:181429741..181429767,+!p2@SOX2!1.47!28.19!SOX2;;chr11:8102846..8102892,+!p1@TUB!1.46!38.44!TUB;;chr14:58798013..58798071,+!p2@ARID4A!1.45!27.33!ARID4A;;chr9:77112225..77112238,+!p2@RORB!1.43!25.99!RORB;;chr8:53322347..53322378,-!p2@ST18!1.43!25.87!ST18;;chr12:106976774..106976788,+!p1@RFX4!1.43!25.75!RFX4;;chr3:141105705..141105770,+!p4@ZBTB38!1.40!29.41!ZBTB38;;chr11:113930425..113930471,+!p1@ZBTB16!1.39!33.44!ZBTB16;;chr15:80696703..80696754,+!p1@ARNT2!1.39!31.12!ARNT2;;chr11:125034640..125034655,+!p1@PKNOX2!1.38!23.06!PKNOX2;;chr2:162272889..162272915,+!p2@TBR1!1.38!23.06!TBR1;;chr19:46801639..46801699,+!p1@HIF3A!1.38!22.94!HIF3A;;chr19:57352109..57352153,-!p2@ZIM2!1.37!22.45!ZIM2;;chr19:38085768..38085821,+!p1@ZNF540!1.36!32.70!ZNF540;;chr5:92920256..92920282,+!p7@NR2F1!1.35!25.99!NR2F1;;chr19:13135386..13135435,+!p4@NFIX!1.35!21.60!NFIX;;chr12:26277817..26277863,-!p2@BHLHE41!1.34!27.82!BHLHE41;;chr18:53070913..53070933,-!p16@TCF4!1.31!19.65!TCF4;;chr14:29236269..29236285,+!p3@FOXG1!1.31!19.28!FOXG1;;chr11:31832658..31832681,-!p1@PAX6!1.29!18.55!PAX6;;chr9:126773880..126773895,+!p2@LHX2!1.29!18.55!LHX2;;chr3:24536253..24536328,-!p1@THRB!1.28!34.05!THRB;;chr12:26277956..26277980,-!p1@BHLHE41!1.27!61.75!BHLHE41;;chr17:7492684..7492778,-!p2@SOX15!1.27!37.22!SOX15;;chr2:95963120..95963136,+!p2@KCNIP3!1.27!17.69!KCNIP3;;chr6:15401104..15401166,+!p5@JARID2!1.27!17.69!JARID2;;chr1:151032860..151032918,+!p1@MLLT11!1.26!201.22!MLLT11;;chr15:31658288..31658338,+!p4@KLF13!1.26!17.21!KLF13;;chr14:33403881..33403924,+!p1@NPAS3!1.26!17.08!NPAS3;;chr10:134599649..134599653,-!p1@NKX6-2!1.24!16.47!NKX6-2;;chr3:141105235..141105307,+!p7@ZBTB38!1.24!16.47!ZBTB38;;chr1:214161272..214161322,+!p1@PROX1!1.23!22.33!PROX1;;chr19:46800289..46800327,+!p2@HIF3A!1.23!15.99!HIF3A;;chr22:41763452..41763466,+!p2@TEF!1.23!15.99!TEF;;chr2:162272716..162272753,+!p3@TBR1!1.22!15.74!TBR1;;chr4:57522598..57522664,-!p3@HOPX!1.21!15.13!HOPX;;chr10:38265517..38265591,-!p1@ZNF25!1.18!54.91!ZNF25;;chr19:38720294..38720348,-!p1@DPF1!1.18!17.69!DPF1;;chr2:192015750..192015793,-!p2@STAT4!1.17!18.43!STAT4;;chr6:126112039..126112062,+!p8@NCOA7!1.17!16.47!NCOA7;;chr16:67198633..67198671,+!p1@HSF4!1.17!13.79!HSF4;;chr10:64133862..64133884,+!p4@ZNF365!1.17!13.67!ZNF365;;chr2:60780753..60780800,-!p1@BCL11A!1.13!61.50!BCL11A;;chr1:151032922..151032951,+!p2@MLLT11!1.13!20.74!MLLT11;;chr12:103351444..103351461,+!p1@ASCL1!1.13!12.57!ASCL1;;chr2:166428839..166428859,+!p2@CSRNP3!1.13!12.45!CSRNP3;;chr19:13136241..13136258,+!p7@NFIX!1.12!16.47!NFIX;;chr10:31610110..31610159,+!p2@ZEB1!1.12!12.20!ZEB1;;chr10:64134045..64134083,+!p3@ZNF365!1.12!12.08!ZNF365;;chr8: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| |expression_enrichment_score=chr7:100065686..100065701,-!p2@TSC22D4!2.48!297.87!TSC22D4;;chr9:77112244..77112262,+!p1@RORB!2.37!258.82!RORB;;chr21:34442439..34442455,+!p1@OLIG1!2.37!235.63!OLIG1;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!2.12!131.06!PEG3;;chr9:114287433..114287513,+!p1@ZNF483!2.10!309.95!ZNF483;;chr2:162272785..162272836,+!p1@TBR1!2.02!102.99!TBR1;;chr17:53342311..53342400,+!p1@HLF!2.00!113.73!HLF;;chr2:2334997..2335053,-!p1@MYT1L!1.97!92.86!MYT1L;;chr4:57547454..57547469,-!p1@HOPX!1.93!84.56!HOPX;;chr17:38821373..38821440,-!p1@KRT222,p2@SMARCE1!1.91!80.90!SMARCE1;;chr5:88178983..88179012,-!p1@MEF2C!1.89!552.41!MEF2C;;chrX:25034067..25034088,-!p1@ARX!1.83!66.87!ARX;;chr3:181429704..181429722,+!p1@SOX2!1.82!64.43!SOX2;;chr14:29235961..29236008,+!p1@FOXG1!1.81!64.19!FOXG1;;chr4:81118647..81118666,+!p1@PRDM8!1.79!79.93!PRDM8;;chr15:80735246..80735321,+!p3@ARNT2!1.79!61.26!ARNT2;;chr15:80733570..80733659,+!p2@ARNT2!1.78!59.91!ARNT2;;chr10:64134120..64134183,+!p1@ZNF365!1.77!68.70!ZNF365;;chr7:31380292..31380351,-!p1@NEUROD6!1.76!56.86!NEUROD6;;chr2:95963052..95963106,+!p1@KCNIP3!1.74!53.69!KCNIP3;;chr17:37764128..37764258,-!p1@NEUROD2!1.70!48.81!NEUROD2;;chr8:40755333..40755352,-!p1@ZMAT4!1.69!47.96!ZMAT4;;chr2:60781201..60781258,-!p3@BCL11A!1.68!46.74!BCL11A;;chr18:53070846..53070902,-!p6@TCF4!1.68!46.37!TCF4;;chr21:34442540..34442560,+!p2@OLIG1!1.67!45.76!OLIG1;;chr2:166326200..166326216,+!p1@CSRNP3!1.66!64.06!CSRNP3;;chr5:88179017..88179046,-!p2@MEF2C!1.63!160.22!MEF2C;;chr11:61520075..61520136,+!p1@C11orf9!1.63!85.05!C11orf9;;chrX:85969626..85969664,+!p1@DACH2!1.63!41.37!DACH2;;chr2:145277882..145277967,-!p3@ZEB2!1.61!67.36!ZEB2;;chr10:48355030..48355090,+!p1@ZNF488!1.61!50.76!ZNF488;;chr2:105470562..105470582,+!p@chr2:105470562..105470582,+!1.60!38.68!POU3F3;;chr22:38380543..38380569,-!p1@SOX10!1.59!37.58!SOX10;;chr9:126774018..126774055,+!p1@LHX2!1.58!36.73!LHX2;;chr14:29234581..29234601,+!p2@FOXG1!1.57!35.75!FOXG1;;chr8:53322304..53322340,-!p1@ST18!1.56!34.90!ST18;;chr10:119302232..119302265,+!p1@EMX2!1.54!33.68!EMX2;;chr4:57522166..57522260,-!p2@HOPX!1.53!38.07!HOPX;;chr21:34398234..34398250,+!p1@OLIG2!1.52!31.85!OLIG2;;chr7:63505799..63505904,+!p1@ZNF727!1.51!31.48!ZNF727;;chr12:106976678..106976708,+!p2@RFX4!1.50!30.87!RFX4;;chr19:13135582..13135600,+!p3@NFIX!1.50!30.26!NFIX;;chr3:181429741..181429767,+!p2@SOX2!1.47!28.19!SOX2;;chr11:8102846..8102892,+!p1@TUB!1.46!38.44!TUB;;chr14:58798013..58798071,+!p2@ARID4A!1.45!27.33!ARID4A;;chr9:77112225..77112238,+!p2@RORB!1.43!25.99!RORB;;chr8:53322347..53322378,-!p2@ST18!1.43!25.87!ST18;;chr12:106976774..106976788,+!p1@RFX4!1.43!25.75!RFX4;;chr3:141105705..141105770,+!p4@ZBTB38!1.40!29.41!ZBTB38;;chr11:113930425..113930471,+!p1@ZBTB16!1.39!33.44!ZBTB16;;chr15:80696703..80696754,+!p1@ARNT2!1.39!31.12!ARNT2;;chr11:125034640..125034655,+!p1@PKNOX2!1.38!23.06!PKNOX2;;chr2:162272889..162272915,+!p2@TBR1!1.38!23.06!TBR1;;chr19:46801639..46801699,+!p1@HIF3A!1.38!22.94!HIF3A;;chr19:57352109..57352153,-!p2@ZIM2!1.37!22.45!ZIM2;;chr19:38085768..38085821,+!p1@ZNF540!1.36!32.70!ZNF540;;chr5:92920256..92920282,+!p7@NR2F1!1.35!25.99!NR2F1;;chr19:13135386..13135435,+!p4@NFIX!1.35!21.60!NFIX;;chr12:26277817..26277863,-!p2@BHLHE41!1.34!27.82!BHLHE41;;chr18:53070913..53070933,-!p16@TCF4!1.31!19.65!TCF4;;chr14:29236269..29236285,+!p3@FOXG1!1.31!19.28!FOXG1;;chr11:31832658..31832681,-!p1@PAX6!1.29!18.55!PAX6;;chr9:126773880..126773895,+!p2@LHX2!1.29!18.55!LHX2;;chr3:24536253..24536328,-!p1@THRB!1.28!34.05!THRB;;chr12:26277956..26277980,-!p1@BHLHE41!1.27!61.75!BHLHE41;;chr17:7492684..7492778,-!p2@SOX15!1.27!37.22!SOX15;;chr2:95963120..95963136,+!p2@KCNIP3!1.27!17.69!KCNIP3;;chr6:15401104..15401166,+!p5@JARID2!1.27!17.69!JARID2;;chr1:151032860..151032918,+!p1@MLLT11!1.26!201.22!MLLT11;;chr15:31658288..31658338,+!p4@KLF13!1.26!17.21!KLF13;;chr14:33403881..33403924,+!p1@NPAS3!1.26!17.08!NPAS3;;chr10:134599649..134599653,-!p1@NKX6-2!1.24!16.47!NKX6-2;;chr3:141105235..141105307,+!p7@ZBTB38!1.24!16.47!ZBTB38;;chr1:214161272..214161322,+!p1@PROX1!1.23!22.33!PROX1;;chr19:46800289..46800327,+!p2@HIF3A!1.23!15.99!HIF3A;;chr22:41763452..41763466,+!p2@TEF!1.23!15.99!TEF;;chr2:162272716..162272753,+!p3@TBR1!1.22!15.74!TBR1;;chr4:57522598..57522664,-!p3@HOPX!1.21!15.13!HOPX;;chr10:38265517..38265591,-!p1@ZNF25!1.18!54.91!ZNF25;;chr19:38720294..38720348,-!p1@DPF1!1.18!17.69!DPF1;;chr2:192015750..192015793,-!p2@STAT4!1.17!18.43!STAT4;;chr6:126112039..126112062,+!p8@NCOA7!1.17!16.47!NCOA7;;chr16:67198633..67198671,+!p1@HSF4!1.17!13.79!HSF4;;chr10:64133862..64133884,+!p4@ZNF365!1.17!13.67!ZNF365;;chr2:60780753..60780800,-!p1@BCL11A!1.13!61.50!BCL11A;;chr1:151032922..151032951,+!p2@MLLT11!1.13!20.74!MLLT11;;chr12:103351444..103351461,+!p1@ASCL1!1.13!12.57!ASCL1;;chr2:166428839..166428859,+!p2@CSRNP3!1.13!12.45!CSRNP3;;chr19:13136241..13136258,+!p7@NFIX!1.12!16.47!NFIX;;chr10:31610110..31610159,+!p2@ZEB1!1.12!12.20!ZEB1;;chr10:64134045..64134083,+!p3@ZNF365!1.12!12.08!ZNF365;;chr8:60031682..60031710,-!p2@TOX!1.11!19.40!TOX;;chr9:126774058..126774081,+!p3@LHX2!1.11!11.96!LHX2;;chr9:2159850..2159880,+!p14@SMARCA2!1.11!11.84!SMARCA2;;chr2:105470536..105470556,+!p@chr2:105470536..105470556,+!1.11!11.84!POU3F3;;chr3:126076242..126076257,-!p1@KLF15!1.10!14.40!KLF15;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.10!11.59!ZBED1;;chr11:125034605..125034636,+!p2@PKNOX2!1.10!11.59!PKNOX2;;chr14:58797974..58798011,+!p3@ARID4A!1.10!11.59!ARID4A;;chr20:42544782..42544828,+!p4@TOX2!1.10!11.47!TOX2;;chr20:62680984..62680999,-!p1@SOX18!1.09!15.13!SOX18;;chr5:92919375..92919438,+!p6@NR2F1!1.09!12.20!NR2F1;;chr7:73038839..73038862,-!p1@MLXIPL!1.08!11.10!MLXIPL;;chr3:24536332..24536358,-!p2@THRB!1.08!11.10!THRB;;chr2:60780607..60780624,-!p2@BCL11A!1.07!33.07!BCL11A;;chr2:180726291..180726311,-!p1@ZNF385B!1.07!10.74!ZNF385B;;chr5:88179230..88179270,-!p4@MEF2C!1.06!20.62!MEF2C;;chr19:58545454..58545498,+!p1@ZSCAN1!1.06!10.37!ZSCAN1;;chr21:39870339..39870443,-!p1@ERG!1.06!10.37!ERG;;chr16:1031762..1031781,+!p1@SOX8!1.06!10.37!SOX8;;chrX:118739835..118739862,-!p1@NKRF!1.05!11.35!NKRF;;chr9:2159800..2159825,+!p15@SMARCA2!1.05!10.25!SMARCA2;;chr2:2328299..2328363,-!p3@MYT1L!1.05!10.25!MYT1L;;chr2:60781148..60781159,-!p8@BCL11A!1.05!10.25!BCL11A;;chr9:3525867..3525902,-!p3@RFX3!1.04!34.53!RFX3;;chr15:42743341..42743377,-!p3@ZFP106!1.04!16.72!ZFP106;;chr12:54785074..54785122,-!p2@ZNF385A!1.04!15.38!ZNF385A;;chr3:21792682..21792720,-!p1@ZNF385D!1.04!10.01!ZNF385D;;chr1:151032782..151032801,+!p4@MLLT11!1.03!19.52!MLLT11;;chr1:244219775..244219893,+!p2@ZNF238!1.03!13.30!ZNF238;;chr13:100634031..100634045,+!p1@ZIC2!1.03!9.76!ZIC2;;chr3:141106643..141106681,+!p16@ZBTB38!1.03!9.76!ZBTB38;;chr2:2335109..2335134,-!p2@MYT1L!1.03!9.64!MYT1L;;chr3:18466787..18466839,-!p1@SATB1!1.02!43.56!SATB1;;chr11:8102819..8102845,+!p3@TUB!1.02!11.84!TUB;;chr14:33408072..33408114,+!p2@NPAS3!1.02!11.23!NPAS3;;chr11:113930401..113930422,+!p3@ZBTB16!1.02!9.52!ZBTB16;;chr1:244214577..244214593,+!p1@ZNF238!1.02!9.52!ZNF238;;chr21:34442584..34442587,+!p3@OLIG1!1.02!9.52!OLIG1;;chr19:13135566..13135577,+!p9@NFIX!1.02!9.52!NFIX;;chr11:31832862..31832884,-!p2@PAX6!1.02!9.40!PAX6;;chrX:118739782..118739829,-!p2@NKRF!1.02!9.40!NKRF;;chr17:70117153..70117174,+!p1@SOX9!1.01!96.77!SOX9;;chr9:3525910..3525955,-!p4@RFX3!1.01!28.55!RFX3;;chr7:64023410..64023428,-!p2@ZNF680!1.01!14.64!ZNF680;;chr2:2335070..2335098,-!p4@MYT1L!1.01!9.27!MYT1L;;chr2:42721205..42721307,+!p4@MTA3!1.01!9.15!MTA3;;chr6:19837592..19837621,+!p1@ID4!1.00!56.13!ID4;;chr9:14314131..14314147,-!p2@NFIB!1.00!51.13!NFIB;;chr2:200323414..200323455,-!p1@SATB2!1.00!19.40!SATB2;;chr5:88179195..88179224,-!p3@MEF2C!1.00!14.40!MEF2C;;chr6:143266185..143266238,-!p2@HIVEP2!1.00!12.45!HIVEP2;;chr8:93074803..93074845,-!p1@RUNX1T1!1.00!8.91!RUNX1T1;;chr20:21494684..21494708,-!p1@NKX2-2!1.00!8.91!NKX2-2;;chr12:24102576..24102623,-!p2@SOX5!1.00!8.91!SOX5;;chr12:54779511..54779577,-!p5@ZNF385A!1.00!8.91!ZNF385A;;chr6:126112074..126112144,+!p1@NCOA7!0.99!121.54!NCOA7;;chr17:38219209..38219230,+!p1@THRA!0.99!116.29!THRA;;chr1:8585945..8586056,-!p3@RERE!0.99!30.14!RERE;;chr1:164528588..164528610,+!p8@PBX1!0.99!13.67!PBX1;;chr2:180726331..180726344,-!p5@ZNF385B!0.99!8.79!ZNF385B;;chr12:103352277..103352324,+!p2@ASCL1!0.99!8.79!ASCL1;;chr2:162273196..162273210,+!p5@TBR1!0.99!8.66!TBR1;;chr2:2328725..2328739,-!p5@MYT1L!0.99!8.66!MYT1L;;chr2:73520667..73520683,-!p1@EGR4!0.99!8.66!EGR4;;chr4:26344778..26344807,+!p8@RBPJ!0.99!8.66!RBPJ;;chr14:75894391..75894435,+!p2@JDP2!0.98!9.76!JDP2;;chr10:64133910..64133925,+!p5@ZNF365!0.97!8.42!ZNF365;;chr2:162273241..162273253,+!p4@TBR1!0.97!8.42!TBR1;;chr2:166428861..166428883,+!p3@CSRNP3!0.97!8.30!CSRNP3;;chr20:51589133..51589159,+!p2@TSHZ2!0.97!8.30!TSHZ2;;chrX:84498989..84499003,+!p1@ZNF711!0.96!11.23!ZNF711;;chr1:61869835..61869848,+!p8@NFIA!0.96!10.86!NFIA;;chr18:53068911..53068935,-!p4@TCF4!0.96!9.15!TCF4;;chr2:162273101..162273118,+!p7@TBR1!0.96!8.18!TBR1;;chr2:180726254..180726275,-!p4@ZNF385B!0.96!8.05!ZNF385B;;chr16:67197952..67197990,+!p5@HSF4!0.96!8.05!HSF4;;chr19:7580549..7580596,+!p3@ZNF358!0.96!8.05!ZNF358;;chr8:60031619..60031676,-!p1@TOX!0.95!17.57!TOX;;chr16:69726820..69726843,+!p3@NFAT5!0.95!11.71!NFAT5;;chr9:124991204..124991246,-!p1@LHX6!0.95!7.93!LHX6;;chr8:28347737..28347785,-!p1@FBXO16,p2@ZNF395!0.94!16.96!ZNF395;;chr11:113930291..113930339,+!p2@ZBTB16!0.94!12.93!ZBTB16;;chr11:31832807..31832823,-!p4@PAX6!0.94!7.81!PAX6;;chr14:33403648..33403710,+!p3@NPAS3!0.94!7.81!NPAS3;;chr2:172950227..172950249,+!p2@DLX1!0.94!7.81!DLX1;;chr2:24930357..24930402,+!p3@NCOA1!0.93!8.54!NCOA1;;chr5:138609489..138609542,+!p8@MATR3!0.93!7.57!MATR3;;chr8:22550530..22550609,-!p2@EGR3!0.93!7.44!EGR3;;chr2:162273254..162273267,+!p6@TBR1!0.93!7.44!TBR1;;chr17:38256822..38256851,-!p1@NR1D1!0.92!60.16!NR1D1;;chr19:53636125..53636178,-!p1@ZNF415!0.92!21.72!ZNF415;;chr15:61521417..61521460,-!p2@RORA!0.92!16.96!RORA;;chr17:38219184..38219195,+!p3@THRA!0.92!15.01!THRA;;chr9:1309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| ||
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000200;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000955;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000956;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001016;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001871;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001890;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001893;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002771;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0003528 | |||
|ffid_belonging_in_development=UBERON:0002532,UBERON:0006601,UBERON:0010316 | |ffid_belonging_in_development=UBERON:0002532,UBERON:0006601,UBERON:0010316 | ||
|fonse_cell_line= | |fonse_cell_line= | ||
Line 38: | Line 42: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/medial%2520temporal%2520gyrus%2520-%2520adult%252c%2520donor10196.CNhs13809.10183-103D3.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/medial%2520temporal%2520gyrus%2520-%2520adult%252c%2520donor10196.CNhs13809.10183-103D3.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/medial%2520temporal%2520gyrus%2520-%2520adult%252c%2520donor10196.CNhs13809.10183-103D3.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/medial%2520temporal%2520gyrus%2520-%2520adult%252c%2520donor10196.CNhs13809.10183-103D3.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/medial%2520temporal%2520gyrus%2520-%2520adult%252c%2520donor10196.CNhs13809.10183-103D3.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:10183-103D3 | |id=FF:10183-103D3 | ||
|is_a=EFO:0002091;;FF:0010150 | |is_a=EFO:0002091;;FF:0010150 | ||
|is_obsolete= | |is_obsolete= | ||
|library_id=CNhs13809 | |||
|library_id_phase_based=2:CNhs13809 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10183 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10183 | |||
|name=medial temporal gyrus - adult, donor10196 | |name=medial temporal gyrus - adult, donor10196 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
Line 48: | Line 63: | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq= | |profile_srnaseq= | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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|rna_box=103 | |rna_box=103 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
Line 61: | Line 79: | ||
|rna_weight_ug=63.82425 | |rna_weight_ug=63.82425 | ||
|sample_age=60 | |sample_age=60 | ||
|sample_category=tissues | |||
|sample_cell_catalog=NA | |sample_cell_catalog=NA | ||
|sample_cell_line= | |sample_cell_line= | ||
Line 82: | Line 101: | ||
|top_motifs=FOXM1:5.51424443443;HOXA9_MEIS1:5.34280220228;ARID5B:4.47414425172;DBP:4.1739825135;REST:4.13472369817;MYFfamily:3.97974172515;AHR_ARNT_ARNT2:3.76630675728;PAX6:3.74281085355;CUX2:3.67843961945;PRDM1:3.54877475848;ZBTB6:3.52755641085;NKX6-1,2:3.4034209993;TEF:3.39086709789;NHLH1,2:3.34408489318;OCT4_SOX2{dimer}:3.29095699161;KLF4:3.23854804219;FOXD3:3.14923827564;NKX3-2:3.13907444958;MTF1:3.07437704735;GATA4:3.07307164002;EGR1..3:3.06833114108;PRRX1,2:3.03950034944;ZFP161:2.96291387423;MTE{core}:2.93862482054;MED-1{core}:2.76884541731;CDC5L:2.74121746743;ALX1:2.70818697993;UFEwm:2.69180673376;ATF2:2.69046139806;RFX2..5_RFXANK_RFXAP:2.59854357341;ZNF384:2.58799252168;POU3F1..4:2.57320660251;GTF2I:2.56147507135;HMGA1,2:2.55976267852;RFX1:2.55003739184;POU6F1:2.48931185853;SMAD1..7,9:2.4712490441;POU5F1:2.46686346534;PAX5:2.45722106274;IKZF2:2.39987802973;MZF1:2.36460089841;PAX4:2.36093845944;RREB1:2.34033037128;TFAP2B:2.26334352547;SOX2:2.20032342854;GFI1B:2.16856782358;HIC1:2.09260851003;NFIX:2.06593229806;LMO2:1.98647832158;HOX{A4,D4}:1.94583391733;FOXP3:1.88326613153;JUN:1.87860345508;SOX5:1.83668667856;BREu{core}:1.81074219984;HAND1,2:1.76044974126;MAFB:1.73920097014;ZBTB16:1.69555646373;PATZ1:1.67359937679;NRF1:1.64779589161;SOX17:1.53287011467;ONECUT1,2:1.51458908094;EBF1:1.39745188744;TGIF1:1.39512452038;RXR{A,B,G}_{NR1H2,PPAR}dimers:1.38452690517;HMX1:1.3767455003;XBP1:1.37416799331;NFIL3:1.32129016871;GCM1,2:1.29637837869;STAT1,3:1.29083216667;T:1.28594797891;NKX2-2,8:1.27390184799;BPTF:1.23446687195;ZIC1..3:1.22364022753;TFDP1:1.19658702015;MAZ:1.19055928734;GZF1:1.18888446722;YY1:1.15075927539;MYOD1:1.14649195115;EVI1:1.14334595224;NFE2L1:1.11841790643;TLX2:1.10029015458;RBPJ:1.09452152073;LEF1_TCF7_TCF7L1,2:1.07921478812;FOX{F1,F2,J1}:1.05444593489;SOX{8,9,10}:1.03967255729;NKX3-1:1.00768966979;CRX:1.00064517544;ZNF238:0.887557743579;ESRRA:0.873208640606;ZNF143:0.785832661895;NKX2-3_NKX2-5:0.78440332069;ZEB1:0.75698041504;ZNF423:0.753016789469;FOXL1:0.729947209729;HBP1_HMGB_SSRP1_UBTF:0.687514574229;NR3C1:0.675374244258;PAX1,9:0.613725703117;AIRE:0.603976724006;CREB1:0.589248402011;PBX1:0.556799456528;SPZ1:0.533140919159;GTF2A1,2:0.509499372798;RORA:0.468977080913;FOXQ1:0.448999087579;TBX4,5:0.441313743072;EP300:0.427306005838;STAT2,4,6:0.399143436764;IKZF1:0.369082603048;SREBF1,2:0.340969648179;PAX8:0.334142627226;ATF4:0.319661161899;POU1F1:0.271162029508;ATF5_CREB3:0.213434385641;FOXN1:0.187047191706;NANOG:0.16300115569;MEF2{A,B,C,D}:0.145957749218;AR:0.144381668741;GFI1:0.125705140775;NR1H4:0.119676762746;SP1:0.0809685360476;IRF7:0.0787510667466;TFAP2{A,C}:0.0359247842582;HSF1,2:-0.0330787378747;CDX1,2,4:-0.039474465966;LHX3,4:-0.0479093243213;ADNP_IRX_SIX_ZHX:-0.0491409770497;SNAI1..3:-0.0643133887619;TLX1..3_NFIC{dimer}:-0.0779719961373;ALX4:-0.108575492665;NANOG{mouse}:-0.114440883598;IRF1,2:-0.136252828272;FOX{D1,D2}:-0.138173751098;PAX2:-0.141033870279;RXRA_VDR{dimer}:-0.257379735844;PDX1:-0.306457862673;MYBL2:-0.307596127765;TOPORS:-0.366659291663;DMAP1_NCOR{1,2}_SMARC:-0.390771561647;FOX{I1,J2}:-0.390876984921;bHLH_family:-0.44316299718;CEBPA,B_DDIT3:-0.444373690102;FOXP1:-0.452222193786;PAX3,7:-0.503464285861;FOXA2:-0.526388435967;SPI1:-0.538866050142;XCPE1{core}:-0.571055166609;NFE2L2:-0.572024744094;NFATC1..3:-0.577347640474;NFY{A,B,C}:-0.601377713906;ESR1:-0.704597777909;NR5A1,2:-0.711223902134;HNF4A_NR2F1,2:-0.716112765231;TAL1_TCF{3,4,12}:-0.727509105721;SPIB:-0.752625614582;NFE2:-0.754406011729;HOX{A6,A7,B6,B7}:-0.76866208336;RXR{A,B,G}:-0.862819672284;POU2F1..3:-0.935721236675;FOXO1,3,4:-0.941849235117;ATF6:-0.96887311881;NKX2-1,4:-0.982269438014;HIF1A:-0.991458842785;BACH2:-1.03718628784;HNF1A:-1.06654407059;GATA6:-1.07045738601;VSX1,2:-1.12867985037;ETS1,2:-1.17035630765;TFAP4:-1.18683586399;FOSL2:-1.21161488543;TFCP2:-1.23150361806;RUNX1..3:-1.24169495842;ZNF148:-1.26699651884;E2F1..5:-1.2683220059;GLI1..3:-1.30337625649;FOS_FOS{B,L1}_JUN{B,D}:-1.3084294833;TP53:-1.31468600402;NFKB1_REL_RELA:-1.36385572093;PITX1..3:-1.36955517989;ELK1,4_GABP{A,B1}:-1.37314340812;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.4480738356;TEAD1:-1.559560005;TBP:-1.58505462415;MYB:-1.72390396371;ELF1,2,4:-1.78405140356;HLF:-1.79587184448;SRF:-1.93009358503;HES1:-2.05482480161;EN1,2:-2.08028016456;NR6A1:-2.13916998473;PPARG:-2.50466615714;HOX{A5,B5}:-2.5765994926;STAT5{A,B}:-2.71373745166 | |top_motifs=FOXM1:5.51424443443;HOXA9_MEIS1:5.34280220228;ARID5B:4.47414425172;DBP:4.1739825135;REST:4.13472369817;MYFfamily:3.97974172515;AHR_ARNT_ARNT2:3.76630675728;PAX6:3.74281085355;CUX2:3.67843961945;PRDM1:3.54877475848;ZBTB6:3.52755641085;NKX6-1,2:3.4034209993;TEF:3.39086709789;NHLH1,2:3.34408489318;OCT4_SOX2{dimer}:3.29095699161;KLF4:3.23854804219;FOXD3:3.14923827564;NKX3-2:3.13907444958;MTF1:3.07437704735;GATA4:3.07307164002;EGR1..3:3.06833114108;PRRX1,2:3.03950034944;ZFP161:2.96291387423;MTE{core}:2.93862482054;MED-1{core}:2.76884541731;CDC5L:2.74121746743;ALX1:2.70818697993;UFEwm:2.69180673376;ATF2:2.69046139806;RFX2..5_RFXANK_RFXAP:2.59854357341;ZNF384:2.58799252168;POU3F1..4:2.57320660251;GTF2I:2.56147507135;HMGA1,2:2.55976267852;RFX1:2.55003739184;POU6F1:2.48931185853;SMAD1..7,9:2.4712490441;POU5F1:2.46686346534;PAX5:2.45722106274;IKZF2:2.39987802973;MZF1:2.36460089841;PAX4:2.36093845944;RREB1:2.34033037128;TFAP2B:2.26334352547;SOX2:2.20032342854;GFI1B:2.16856782358;HIC1:2.09260851003;NFIX:2.06593229806;LMO2:1.98647832158;HOX{A4,D4}:1.94583391733;FOXP3:1.88326613153;JUN:1.87860345508;SOX5:1.83668667856;BREu{core}:1.81074219984;HAND1,2:1.76044974126;MAFB:1.73920097014;ZBTB16:1.69555646373;PATZ1:1.67359937679;NRF1:1.64779589161;SOX17:1.53287011467;ONECUT1,2:1.51458908094;EBF1:1.39745188744;TGIF1:1.39512452038;RXR{A,B,G}_{NR1H2,PPAR}dimers:1.38452690517;HMX1:1.3767455003;XBP1:1.37416799331;NFIL3:1.32129016871;GCM1,2:1.29637837869;STAT1,3:1.29083216667;T:1.28594797891;NKX2-2,8:1.27390184799;BPTF:1.23446687195;ZIC1..3:1.22364022753;TFDP1:1.19658702015;MAZ:1.19055928734;GZF1:1.18888446722;YY1:1.15075927539;MYOD1:1.14649195115;EVI1:1.14334595224;NFE2L1:1.11841790643;TLX2:1.10029015458;RBPJ:1.09452152073;LEF1_TCF7_TCF7L1,2:1.07921478812;FOX{F1,F2,J1}:1.05444593489;SOX{8,9,10}:1.03967255729;NKX3-1:1.00768966979;CRX:1.00064517544;ZNF238:0.887557743579;ESRRA:0.873208640606;ZNF143:0.785832661895;NKX2-3_NKX2-5:0.78440332069;ZEB1:0.75698041504;ZNF423:0.753016789469;FOXL1:0.729947209729;HBP1_HMGB_SSRP1_UBTF:0.687514574229;NR3C1:0.675374244258;PAX1,9:0.613725703117;AIRE:0.603976724006;CREB1:0.589248402011;PBX1:0.556799456528;SPZ1:0.533140919159;GTF2A1,2:0.509499372798;RORA:0.468977080913;FOXQ1:0.448999087579;TBX4,5:0.441313743072;EP300:0.427306005838;STAT2,4,6:0.399143436764;IKZF1:0.369082603048;SREBF1,2:0.340969648179;PAX8:0.334142627226;ATF4:0.319661161899;POU1F1:0.271162029508;ATF5_CREB3:0.213434385641;FOXN1:0.187047191706;NANOG:0.16300115569;MEF2{A,B,C,D}:0.145957749218;AR:0.144381668741;GFI1:0.125705140775;NR1H4:0.119676762746;SP1:0.0809685360476;IRF7:0.0787510667466;TFAP2{A,C}:0.0359247842582;HSF1,2:-0.0330787378747;CDX1,2,4:-0.039474465966;LHX3,4:-0.0479093243213;ADNP_IRX_SIX_ZHX:-0.0491409770497;SNAI1..3:-0.0643133887619;TLX1..3_NFIC{dimer}:-0.0779719961373;ALX4:-0.108575492665;NANOG{mouse}:-0.114440883598;IRF1,2:-0.136252828272;FOX{D1,D2}:-0.138173751098;PAX2:-0.141033870279;RXRA_VDR{dimer}:-0.257379735844;PDX1:-0.306457862673;MYBL2:-0.307596127765;TOPORS:-0.366659291663;DMAP1_NCOR{1,2}_SMARC:-0.390771561647;FOX{I1,J2}:-0.390876984921;bHLH_family:-0.44316299718;CEBPA,B_DDIT3:-0.444373690102;FOXP1:-0.452222193786;PAX3,7:-0.503464285861;FOXA2:-0.526388435967;SPI1:-0.538866050142;XCPE1{core}:-0.571055166609;NFE2L2:-0.572024744094;NFATC1..3:-0.577347640474;NFY{A,B,C}:-0.601377713906;ESR1:-0.704597777909;NR5A1,2:-0.711223902134;HNF4A_NR2F1,2:-0.716112765231;TAL1_TCF{3,4,12}:-0.727509105721;SPIB:-0.752625614582;NFE2:-0.754406011729;HOX{A6,A7,B6,B7}:-0.76866208336;RXR{A,B,G}:-0.862819672284;POU2F1..3:-0.935721236675;FOXO1,3,4:-0.941849235117;ATF6:-0.96887311881;NKX2-1,4:-0.982269438014;HIF1A:-0.991458842785;BACH2:-1.03718628784;HNF1A:-1.06654407059;GATA6:-1.07045738601;VSX1,2:-1.12867985037;ETS1,2:-1.17035630765;TFAP4:-1.18683586399;FOSL2:-1.21161488543;TFCP2:-1.23150361806;RUNX1..3:-1.24169495842;ZNF148:-1.26699651884;E2F1..5:-1.2683220059;GLI1..3:-1.30337625649;FOS_FOS{B,L1}_JUN{B,D}:-1.3084294833;TP53:-1.31468600402;NFKB1_REL_RELA:-1.36385572093;PITX1..3:-1.36955517989;ELK1,4_GABP{A,B1}:-1.37314340812;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.4480738356;TEAD1:-1.559560005;TBP:-1.58505462415;MYB:-1.72390396371;ELF1,2,4:-1.78405140356;HLF:-1.79587184448;SRF:-1.93009358503;HES1:-2.05482480161;EN1,2:-2.08028016456;NR6A1:-2.13916998473;PPARG:-2.50466615714;HOX{A5,B5}:-2.5765994926;STAT5{A,B}:-2.71373745166 | ||
|xref= | |xref= | ||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10183-103D3;search_select_hide=table117:FF:10183-103D3 | |||
}} | }} |
Latest revision as of 12:25, 3 June 2020
Name: | medial temporal gyrus - adult, donor10196 |
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Species: | Human (Homo sapiens) |
Library ID: | CNhs13809 |
Sample type: | tissues |
Genomic View: | UCSC |
RefEX: | Specific genes |
FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7, 8, 9 |
CAGEd-oPOSSUM: | link |
ZENBU report : | link |
Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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Download raw sequence, BAM & CTSS | ||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13809
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13809
Novel motif | Logo | P-value |
---|---|---|
1 | 1 | 0.096 |
10 | 10 | 0.0609 |
100 | 100 | 0.3 |
101 | 101 | 0.562 |
102 | 102 | 0.837 |
103 | 103 | 0.455 |
104 | 104 | 0.103 |
105 | 105 | 0.0279 |
106 | 106 | 0.0519 |
107 | 107 | 0.117 |
108 | 108 | 0.712 |
109 | 109 | 0.00341 |
11 | 11 | 0.0185 |
110 | 110 | 0.0579 |
111 | 111 | 0.336 |
112 | 112 | 0.913 |
113 | 113 | 0.937 |
114 | 114 | 0.438 |
115 | 115 | 0.196 |
116 | 116 | 0.215 |
117 | 117 | 0.0103 |
118 | 118 | 0.149 |
119 | 119 | 0.183 |
12 | 12 | 0.326 |
120 | 120 | 0.513 |
121 | 121 | 0.252 |
122 | 122 | 0.806 |
123 | 123 | 0.33 |
124 | 124 | 0.0986 |
125 | 125 | 0.223 |
126 | 126 | 0.0388 |
127 | 127 | 0.43 |
128 | 128 | 0.205 |
129 | 129 | 0.953 |
13 | 13 | 1.53987e-4 |
130 | 130 | 0.089 |
131 | 131 | 0.151 |
132 | 132 | 0.802 |
133 | 133 | 0.00894 |
134 | 134 | 0.993 |
135 | 135 | 0.171 |
136 | 136 | 0.00228 |
137 | 137 | 0.861 |
138 | 138 | 0.701 |
139 | 139 | 0.225 |
14 | 14 | 0.538 |
140 | 140 | 0.549 |
141 | 141 | 0.896 |
142 | 142 | 0.712 |
143 | 143 | 0.0644 |
144 | 144 | 0.988 |
145 | 145 | 0.113 |
146 | 146 | 0.242 |
147 | 147 | 0.49 |
148 | 148 | 0.497 |
149 | 149 | 0.581 |
15 | 15 | 0.0681 |
150 | 150 | 0.157 |
151 | 151 | 0.563 |
152 | 152 | 0.0675 |
153 | 153 | 0.767 |
154 | 154 | 0.468 |
155 | 155 | 0.688 |
156 | 156 | 0.594 |
157 | 157 | 0.351 |
158 | 158 | 0.716 |
159 | 159 | 0.162 |
16 | 16 | 0.149 |
160 | 160 | 0.333 |
161 | 161 | 0.179 |
162 | 162 | 0.668 |
163 | 163 | 0.912 |
164 | 164 | 0.0475 |
165 | 165 | 0.0648 |
166 | 166 | 0.666 |
167 | 167 | 0.903 |
168 | 168 | 0.562 |
169 | 169 | 0.00891 |
17 | 17 | 0.152 |
18 | 18 | 0.454 |
19 | 19 | 0.192 |
2 | 2 | 0.822 |
20 | 20 | 0.109 |
21 | 21 | 0.0801 |
22 | 22 | 0.171 |
23 | 23 | 0.415 |
24 | 24 | 0.0449 |
25 | 25 | 0.448 |
26 | 26 | 1.07106e-4 |
27 | 27 | 0.793 |
28 | 28 | 0.543 |
29 | 29 | 0.0252 |
3 | 3 | 0.0381 |
30 | 30 | 0.945 |
31 | 31 | 0.939 |
32 | 32 | 0.0815 |
33 | 33 | 0.0605 |
34 | 34 | 0.517 |
35 | 35 | 0.84 |
36 | 36 | 0.172 |
37 | 37 | 0.0406 |
38 | 38 | 0.289 |
39 | 39 | 0.256 |
4 | 4 | 0.723 |
40 | 40 | 0.0207 |
41 | 41 | 0.296 |
42 | 42 | 0.187 |
43 | 43 | 0.0976 |
44 | 44 | 0.996 |
45 | 45 | 0.579 |
46 | 46 | 0.171 |
47 | 47 | 0.125 |
48 | 48 | 0.0646 |
49 | 49 | 0.101 |
5 | 5 | 0.631 |
50 | 50 | 0.169 |
51 | 51 | 0.563 |
52 | 52 | 0.45 |
53 | 53 | 0.617 |
54 | 54 | 0.42 |
55 | 55 | 0.565 |
56 | 56 | 0.437 |
57 | 57 | 0.293 |
58 | 58 | 0.334 |
59 | 59 | 0.132 |
6 | 6 | 0.896 |
60 | 60 | 0.0528 |
61 | 61 | 0.0577 |
62 | 62 | 0.272 |
63 | 63 | 0.121 |
64 | 64 | 0.271 |
65 | 65 | 0.275 |
66 | 66 | 0.062 |
67 | 67 | 0.412 |
68 | 68 | 0.171 |
69 | 69 | 0.415 |
7 | 7 | 0.0272 |
70 | 70 | 0.152 |
71 | 71 | 0.0137 |
72 | 72 | 0.439 |
73 | 73 | 0.025 |
74 | 74 | 0.861 |
75 | 75 | 0.0419 |
76 | 76 | 0.391 |
77 | 77 | 0.154 |
78 | 78 | 0.0026 |
79 | 79 | 0.863 |
8 | 8 | 0.13 |
80 | 80 | 0.402 |
81 | 81 | 0.914 |
82 | 82 | 0.893 |
83 | 83 | 0.0071 |
84 | 84 | 0.374 |
85 | 85 | 0.287 |
86 | 86 | 0.221 |
87 | 87 | 0.00144 |
88 | 88 | 0.818 |
89 | 89 | 0.863 |
9 | 9 | 0.362 |
90 | 90 | 0.239 |
91 | 91 | 0.717 |
92 | 92 | 0.786 |
93 | 93 | 0.776 |
94 | 94 | 0.272 |
95 | 95 | 0.0149 |
96 | 96 | 0.985 |
97 | 97 | 0.582 |
98 | 98 | 0.303 |
99 | 99 | 0.676 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs13809
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0010150 human medial temporal gyrus - adult sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0000955 (brain)
0001871 (temporal lobe)
0000200 (gyrus)
0002771 (middle temporal gyrus)
0000956 (cerebral cortex)
0000479 (tissue)
0004121 (ectoderm-derived structure)
0000064 (organ part)
0010314 (structure with developmental contribution from neural crest)
0011216 (organ system subdivision)
0000062 (organ)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000481 (multi-tissue structure)
0000073 (regional part of nervous system)
0000477 (anatomical cluster)
0003528 (brain grey matter)
0002791 (regional part of telencephalon)
0000467 (anatomical system)
0002619 (regional part of cerebral cortex)
0001062 (anatomical entity)
0000480 (anatomical group)
0002616 (regional part of brain)
0002780 (regional part of forebrain)
0002020 (gray matter)
0010317 (germ layer / neural crest derived structure)
0001017 (central nervous system)
0001016 (nervous system)
0001869 (cerebral hemisphere)
0001893 (telencephalon)
0001890 (forebrain)
0000203 (pallium)
0001950 (neocortex)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0000004 (tissue sample)
0010150 (human medial temporal gyrus - adult sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0002532 (epiblast (generic))
UBERON:0006601 (presumptive ectoderm)
UBERON:0010316 (germ layer / neural crest)