FF:10055-101H1: Difference between revisions
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{{f5samples | {{f5samples | ||
|DRA_sample_Accession=CAGE@SAMD00005818 | |||
|accession_numbers=CAGE;DRX008757;DRR009629;DRZ001054;DRZ002439;DRZ012404;DRZ013789 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000922,UBERON:0005795,UBERON:0000479,UBERON:0000061,UBERON:0000465,UBERON:0002050,UBERON:0005423,UBERON:0001062 | |ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000922,UBERON:0005795,UBERON:0000479,UBERON:0000061,UBERON:0000465,UBERON:0002050,UBERON:0005423,UBERON:0001062 | ||
|ancestors_in_cell_lineage_facet= | |ancestors_in_cell_lineage_facet= | ||
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|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|datafreeze_phase= | |data_phase=2 | ||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score=chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!2.20!157.88!PEG3;;chr7:27224842..27224872,-!p1@HOXA11!2.08!118.00!HOXA11;;chr19:46801639..46801699,+!p1@HIF3A!1.94!87.08!HIF3A;;chr4:174451370..174451387,-!p1@HAND2!1.91!80.16!HAND2;;chr7:27224795..27224840,-!p2@HOXA11!1.89!76.50!HOXA11;;chr6:152128810..152128827,+!p2@ESR1!1.82!64.70!ESR1;;chr15:57511609..57511651,+!p2@TCF12!1.80!102.94!TCF12;;chr8:55370487..55370503,+!p1@SOX17!1.79!60.63!SOX17;;chr19:46800289..46800327,+!p2@HIF3A!1.78!58.59!HIF3A;;chr4:57547454..57547469,-!p1@HOPX!1.77!57.78!HOPX;;chr9:77112244..77112262,+!p1@RORB!1.73!59.00!RORB;;chr5:134369879..134369898,-!p2@PITX1!1.73!52.49!PITX1;;chr13:72441315..72441454,-!p1@DACH1!1.72!101.32!DACH1;;chr10:119302232..119302265,+!p1@EMX2!1.72!51.68!EMX2;;chr7:96654133..96654150,-!p1@DLX5!1.67!45.98!DLX5;;chr7:27192185..27192209,-!p1@HOXA3!1.66!45.17!HOXA3;;chr11:32457075..32457095,-!p1@WT1!1.63!41.50!WT1;;chr17:80797886..80797906,-!p1@ZNF750!1.63!41.50!ZNF750;;chr1:40105299..40105326,-!p1@HEYL!1.62!41.10!HEYL;;chr6:134210243..134210257,+!p1@TCF21!1.59!37.84!TCF21;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.56!35.40!ZBED1;;chr11:34642612..34642646,+!p1@EHF!1.52!32.14!EHF;;chr8:99956662..99956684,+!p1@OSR2!1.49!45.17!OSR2;;chr2:27371879..27371907,+!p1@TCF23!1.49!30.11!TCF23;;chr7:27213893..27213954,-!p1@HOXA10!1.48!28.89!HOXA10;;chr15:96873984..96873999,+!p3@NR2F2!1.47!201.01!NR2F2;;chr2:176981499..176981522,+!p2@HOXD10!1.46!28.08!HOXD10;;chr7:27239703..27239715,-!p1@HOXA13!1.45!27.26!HOXA13;;chr17:1959369..1959388,+!p2@HIC1!1.44!68.77!HIC1;;chr1:170633348..170633399,+!p2@PRRX1!1.40!32.96!PRRX1;;chr2:122042770..122042785,-!p1@TFCP2L1!1.40!24.01!TFCP2L1;;chr20:62680984..62680999,-!p1@SOX18!1.39!31.33!SOX18;;chr3:128212033..128212051,-!p1@GATA2!1.38!23.19!GATA2;;chr6:152126790..152126828,+!p3@ESR1!1.38!22.79!ESR1;;chr2:177001290..177001315,+!p1@HOXD3!1.37!22.38!HOXD3;;chr2:66662281..66662308,+!p1@MEIS1!1.36!74.46!MEIS1;;chr2:166326200..166326216,+!p1@CSRNP3!1.36!31.74!CSRNP3;;chr21:39870339..39870443,-!p1@ERG!1.35!21.57!ERG;;chr10:119302268..119302282,+!p4@EMX2!1.35!21.16!EMX2;;chr10:119302508..119302559,+!p5@EMX2!1.35!21.16!EMX2;;chr1:209979467..209979494,-!p1@IRF6!1.33!22.79!IRF6;;chr5:158526917..158526932,-!p1@EBF1!1.31!47.61!EBF1;;chr16:79634595..79634620,-!p2@MAF!1.31!34.99!MAF;;chr13:72441074..72441172,-!p2@DACH1!1.31!19.53!DACH1;;chr2:66662396..66662407,+!p4@MEIS1!1.31!19.53!MEIS1;;chr15:96874012..96874042,+!p2@NR2F2!1.30!167.23!NR2F2;;chr2:66662895..66662907,+!p3@MEIS1!1.29!22.79!MEIS1;;chr16:51185172..51185197,-!p1@SALL1!1.29!18.72!SALL1;;chr6:152126830..152126847,+!p4@ESR1!1.29!18.72!ESR1;;chr7:27239740..27239759,-!p2@HOXA13!1.29!18.72!HOXA13;;chr18:53068911..53068935,-!p4@TCF4!1.28!20.34!TCF4;;chr7:27205136..27205164,-!p1@HOXA9!1.28!17.90!HOXA9;;chr16:79634624..79634642,-!p1@MAF!1.27!67.95!MAF;;chr3:169381420..169381535,-!p1@MECOM!1.27!20.75!MECOM;;chr2:145277882..145277967,-!p3@ZEB2!1.26!29.70!ZEB2;;chr17:46682321..46682362,-!p1@HOXB6!1.26!17.09!HOXB6;;chr8:10588010..10588030,-!p1@SOX7!1.26!17.09!SOX7;;chr11:128457446..128457461,-!p4@ETS1!1.26!17.09!ETS1;;chr11:32457413..32457431,-!p2@WT1!1.26!17.09!WT1;;chr20:30433396..30433414,-!p1@FOXS1!1.26!17.09!FOXS1;;chr2:66662249..66662267,+!p2@MEIS1!1.25!64.29!MEIS1;;chr1:170633262..170633285,+!p3@PRRX1!1.25!19.12!PRRX1;;chr1:201979743..201979762,+!p1@ELF3!1.25!16.68!ELF3;;chr6:152128782..152128803,+!p5@ESR1!1.25!16.68!ESR1;;chr3:128206762..128206781,-!p2@GATA2!1.24!100.91!GATA2;;chr20:51588873..51588953,+!p1@TSHZ2!1.23!21.16!TSHZ2;;chr2:19558373..19558392,-!p1@OSR1!1.22!41.91!OSR1;;chr3:189507432..189507459,+!p1@TP63!1.22!15.46!TP63;;chr7:28220198..28220269,-!p2@JAZF1!1.21!133.06!JAZF1;;chrX:66763856..66763896,+!p1@AR!1.21!21.97!AR;;chr2:114036488..114036504,-!p1@PAX8!1.21!15.06!PAX8;;chr4:4861385..4861398,+!p1@MSX1!1.20!43.54!MSX1;;chr5:92919100..92919135,+!p3@NR2F1!1.20!17.90!NR2F1;;chr5:134369905..134369972,-!p1@PITX1!1.19!22.38!PITX1;;chr1:164528911..164528940,+!p7@PBX1!1.19!21.57!PBX1;;chr2:176981526..176981543,+!p3@HOXD10!1.19!14.65!HOXD10;;chr2:66662510..66662521,+!p6@MEIS1!1.19!14.65!MEIS1;;chr10:102505327..102505344,+!p1@PAX2!1.19!14.65!PAX2;;chr11:113930425..113930471,+!p1@ZBTB16!1.18!20.34!ZBTB16;;chr17:74137321..74137337,-!p1@FOXJ1!1.18!14.24!FOXJ1;;chr1:24645832..24645853,+!p1@GRHL3!1.18!14.24!GRHL3;;chr11:101000537..101000553,-!p1@PGR!1.17!13.83!PGR;;chr11:129245526..129245553,+!p1@BARX2!1.16!13.43!BARX2;;chr6:126070769..126070801,+!p1@HEY2!1.15!15.06!HEY2;;chr1:170633058..170633084,+!p5@PRRX1!1.15!13.02!PRRX1;;chrX:84498989..84499003,+!p1@ZNF711!1.14!17.50!ZNF711;;chr8:106330656..106330684,+!p1@ZFPM2!1.13!32.96!ZFPM2;;chr12:24715376..24715432,-!p1@SOX5!1.13!15.87!SOX5;;chr1:164528616..164528660,+!p5@PBX1!1.12!24.82!PBX1;;chr11:46299539..46299620,+!p2@CREB3L1!1.12!20.75!CREB3L1;;chr1:170632959..170632987,+!p4@PRRX1!1.12!13.43!PRRX1;;chr3:114819124..114819200,-!p3@ZBTB20!1.11!27.67!ZBTB20;;chr1:170632285..170632309,+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| |expression_enrichment_score=chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!2.20!157.88!PEG3;;chr7:27224842..27224872,-!p1@HOXA11!2.08!118.00!HOXA11;;chr19:46801639..46801699,+!p1@HIF3A!1.94!87.08!HIF3A;;chr4:174451370..174451387,-!p1@HAND2!1.91!80.16!HAND2;;chr7:27224795..27224840,-!p2@HOXA11!1.89!76.50!HOXA11;;chr6:152128810..152128827,+!p2@ESR1!1.82!64.70!ESR1;;chr15:57511609..57511651,+!p2@TCF12!1.80!102.94!TCF12;;chr8:55370487..55370503,+!p1@SOX17!1.79!60.63!SOX17;;chr19:46800289..46800327,+!p2@HIF3A!1.78!58.59!HIF3A;;chr4:57547454..57547469,-!p1@HOPX!1.77!57.78!HOPX;;chr9:77112244..77112262,+!p1@RORB!1.73!59.00!RORB;;chr5:134369879..134369898,-!p2@PITX1!1.73!52.49!PITX1;;chr13:72441315..72441454,-!p1@DACH1!1.72!101.32!DACH1;;chr10:119302232..119302265,+!p1@EMX2!1.72!51.68!EMX2;;chr7:96654133..96654150,-!p1@DLX5!1.67!45.98!DLX5;;chr7:27192185..27192209,-!p1@HOXA3!1.66!45.17!HOXA3;;chr11:32457075..32457095,-!p1@WT1!1.63!41.50!WT1;;chr17:80797886..80797906,-!p1@ZNF750!1.63!41.50!ZNF750;;chr1:40105299..40105326,-!p1@HEYL!1.62!41.10!HEYL;;chr6:134210243..134210257,+!p1@TCF21!1.59!37.84!TCF21;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.56!35.40!ZBED1;;chr11:34642612..34642646,+!p1@EHF!1.52!32.14!EHF;;chr8:99956662..99956684,+!p1@OSR2!1.49!45.17!OSR2;;chr2:27371879..27371907,+!p1@TCF23!1.49!30.11!TCF23;;chr7:27213893..27213954,-!p1@HOXA10!1.48!28.89!HOXA10;;chr15:96873984..96873999,+!p3@NR2F2!1.47!201.01!NR2F2;;chr2:176981499..176981522,+!p2@HOXD10!1.46!28.08!HOXD10;;chr7:27239703..27239715,-!p1@HOXA13!1.45!27.26!HOXA13;;chr17:1959369..1959388,+!p2@HIC1!1.44!68.77!HIC1;;chr1:170633348..170633399,+!p2@PRRX1!1.40!32.96!PRRX1;;chr2:122042770..122042785,-!p1@TFCP2L1!1.40!24.01!TFCP2L1;;chr20:62680984..62680999,-!p1@SOX18!1.39!31.33!SOX18;;chr3:128212033..128212051,-!p1@GATA2!1.38!23.19!GATA2;;chr6:152126790..152126828,+!p3@ESR1!1.38!22.79!ESR1;;chr2:177001290..177001315,+!p1@HOXD3!1.37!22.38!HOXD3;;chr2:66662281..66662308,+!p1@MEIS1!1.36!74.46!MEIS1;;chr2:166326200..166326216,+!p1@CSRNP3!1.36!31.74!CSRNP3;;chr21:39870339..39870443,-!p1@ERG!1.35!21.57!ERG;;chr10:119302268..119302282,+!p4@EMX2!1.35!21.16!EMX2;;chr10:119302508..119302559,+!p5@EMX2!1.35!21.16!EMX2;;chr1:209979467..209979494,-!p1@IRF6!1.33!22.79!IRF6;;chr5:158526917..158526932,-!p1@EBF1!1.31!47.61!EBF1;;chr16:79634595..79634620,-!p2@MAF!1.31!34.99!MAF;;chr13:72441074..72441172,-!p2@DACH1!1.31!19.53!DACH1;;chr2:66662396..66662407,+!p4@MEIS1!1.31!19.53!MEIS1;;chr15:96874012..96874042,+!p2@NR2F2!1.30!167.23!NR2F2;;chr2:66662895..66662907,+!p3@MEIS1!1.29!22.79!MEIS1;;chr16:51185172..51185197,-!p1@SALL1!1.29!18.72!SALL1;;chr6:152126830..152126847,+!p4@ESR1!1.29!18.72!ESR1;;chr7:27239740..27239759,-!p2@HOXA13!1.29!18.72!HOXA13;;chr18:53068911..53068935,-!p4@TCF4!1.28!20.34!TCF4;;chr7:27205136..27205164,-!p1@HOXA9!1.28!17.90!HOXA9;;chr16:79634624..79634642,-!p1@MAF!1.27!67.95!MAF;;chr3:169381420..169381535,-!p1@MECOM!1.27!20.75!MECOM;;chr2:145277882..145277967,-!p3@ZEB2!1.26!29.70!ZEB2;;chr17:46682321..46682362,-!p1@HOXB6!1.26!17.09!HOXB6;;chr8:10588010..10588030,-!p1@SOX7!1.26!17.09!SOX7;;chr11:128457446..128457461,-!p4@ETS1!1.26!17.09!ETS1;;chr11:32457413..32457431,-!p2@WT1!1.26!17.09!WT1;;chr20:30433396..30433414,-!p1@FOXS1!1.26!17.09!FOXS1;;chr2:66662249..66662267,+!p2@MEIS1!1.25!64.29!MEIS1;;chr1:170633262..170633285,+!p3@PRRX1!1.25!19.12!PRRX1;;chr1:201979743..201979762,+!p1@ELF3!1.25!16.68!ELF3;;chr6:152128782..152128803,+!p5@ESR1!1.25!16.68!ESR1;;chr3:128206762..128206781,-!p2@GATA2!1.24!100.91!GATA2;;chr20:51588873..51588953,+!p1@TSHZ2!1.23!21.16!TSHZ2;;chr2:19558373..19558392,-!p1@OSR1!1.22!41.91!OSR1;;chr3:189507432..189507459,+!p1@TP63!1.22!15.46!TP63;;chr7:28220198..28220269,-!p2@JAZF1!1.21!133.06!JAZF1;;chrX:66763856..66763896,+!p1@AR!1.21!21.97!AR;;chr2:114036488..114036504,-!p1@PAX8!1.21!15.06!PAX8;;chr4:4861385..4861398,+!p1@MSX1!1.20!43.54!MSX1;;chr5:92919100..92919135,+!p3@NR2F1!1.20!17.90!NR2F1;;chr5:134369905..134369972,-!p1@PITX1!1.19!22.38!PITX1;;chr1:164528911..164528940,+!p7@PBX1!1.19!21.57!PBX1;;chr2:176981526..176981543,+!p3@HOXD10!1.19!14.65!HOXD10;;chr2:66662510..66662521,+!p6@MEIS1!1.19!14.65!MEIS1;;chr10:102505327..102505344,+!p1@PAX2!1.19!14.65!PAX2;;chr11:113930425..113930471,+!p1@ZBTB16!1.18!20.34!ZBTB16;;chr17:74137321..74137337,-!p1@FOXJ1!1.18!14.24!FOXJ1;;chr1:24645832..24645853,+!p1@GRHL3!1.18!14.24!GRHL3;;chr11:101000537..101000553,-!p1@PGR!1.17!13.83!PGR;;chr11:129245526..129245553,+!p1@BARX2!1.16!13.43!BARX2;;chr6:126070769..126070801,+!p1@HEY2!1.15!15.06!HEY2;;chr1:170633058..170633084,+!p5@PRRX1!1.15!13.02!PRRX1;;chrX:84498989..84499003,+!p1@ZNF711!1.14!17.50!ZNF711;;chr8:106330656..106330684,+!p1@ZFPM2!1.13!32.96!ZFPM2;;chr12:24715376..24715432,-!p1@SOX5!1.13!15.87!SOX5;;chr1:164528616..164528660,+!p5@PBX1!1.12!24.82!PBX1;;chr11:46299539..46299620,+!p2@CREB3L1!1.12!20.75!CREB3L1;;chr1:170632959..170632987,+!p4@PRRX1!1.12!13.43!PRRX1;;chr3:114819124..114819200,-!p3@ZBTB20!1.11!27.67!ZBTB20;;chr1:170632285..170632309,+!p1@PRRX1!1.11!13.43!PRRX1;;chr17:7493405..7493419,-!p1@SOX15!1.11!11.80!SOX15;;chr12:115121962..115121987,-!p1@TBX3!1.10!96.84!TBX3;;chr15:96869255..96869291,+!p6@NR2F2!1.10!21.16!NR2F2;;chr5:88178983..88179012,-!p1@MEF2C!1.09!87.89!MEF2C;;chr2:239756671..239756732,+!p1@TWIST2!1.09!36.62!TWIST2;;chr2:176969228..176969260,+!p1@HOXD11!1.09!11.39!HOXD11;;chr2:5832508..5832524,+!p1@SOX11!1.09!11.39!SOX11;;chr3:25470156..25470227,+!p2@RARB!1.09!11.39!RARB;;chr1:164528942..164528964,+!p11@PBX1!1.09!11.39!PBX1;;chrX:84499081..84499115,+!p2@ZNF711!1.07!15.87!ZNF711;;chr15:96869222..96869251,+!p18@NR2F2!1.07!12.61!NR2F2;;chr1:164528410..164528428,+!p1@PBX1!1.06!79.75!PBX1;;chr17:1958388..1958404,+!p1@HIC1!1.06!67.54!HIC1;;chr20:2673383..2673441,+!p1@EBF4!1.06!16.68!EBF4;;chr15:57511589..57511608,+!p4@TCF12!1.06!10.58!TCF12;;chr10:119302182..119302196,+!p6@EMX2!1.06!10.58!EMX2;;chr22:38380543..38380569,-!p1@SOX10!1.06!10.58!SOX10;;chr2:100721881..100721904,-!p6@AFF3!1.05!10.17!AFF3;;chr2:27371919..27371935,+!p2@TCF23!1.05!10.17!TCF23;;chr15:96869206..96869220,+!p21@NR2F2!1.05!10.17!NR2F2;;chr10:119301928..119301955,+!p7@EMX2!1.05!10.17!EMX2;;chr6:106534192..106534224,+!p1@PRDM1!1.03!28.08!PRDM1;;chr1:164528687..164528711,+!p6@PBX1!1.03!11.39!PBX1;;chr6:152011654..152011682,+!p1@ESR1!1.03!9.77!ESR1;;chr2:176973498..176973524,+!p1@HOXD10!1.03!9.77!HOXD10;;chr11:100999775..100999800,-!p2@PGR!1.03!9.77!PGR;;chr15:101069113..101069169,-!p1@CERS3!1.03!9.77!CERS3;;chr1:61548225..61548299,+!p1@NFIA!1.02!124.92!NFIA;;chr10:70320074..70320106,+!p1@TET1!1.02!19.12!TET1;;chr4:174450089..174450153,-!p2@HAND2!1.02!9.36!HAND2;;chr15:57210961..57211012,+!p3@TCF12!1.01!30.11!TCF12;;chr18:52989565..52989623,-!p9@TCF4!1.01!11.80!TCF4;;chr8:49833948..49833973,-!p2@SNAI2!1.00!59.00!SNAI2;;chr6:19837592..19837621,+!p1@ID4!1.00!56.15!ID4;;chr18:45663490..45663528,-!p2@ZBTB7C!1.00!8.95!ZBTB7C;;chr2:176994408..176994492,+!p1@HOXD8!1.00!8.95!HOXD8;;chr10:64018918..64018936,+!p2@ZNF365!1.00!8.95!ZNF365;;chr1:24645921..24645973,+!p2@GRHL3!1.00!8.95!GRHL3;;chr2:70142232..70142251,+!p1@MXD1!0.99!50.05!MXD1;;chr15:42749722..42749739,-!p2@ZFP106!0.99!15.87!ZFP106;;chr6:106534230..106534254,+!p2@PRDM1!0.98!21.97!PRDM1;;chr1:25256756..25256774,-!p1@RUNX3!0.98!16.28!RUNX3;;chr17:46667594..46667619,-!p1@HOXB3!0.98!8.54!HOXB3;;chr1:61547894..61547968,+!p2@NFIA!0.97!24.82!NFIA;;chr20:55204351..55204377,+!p1@TFAP2C!0.97!10.58!TFAP2C;;chr8:106330696..106330719,+!p2@ZFPM2!0.96!10.58!ZFPM2;;chr8:93074803..93074845,-!p1@RUNX1T1!0.96!8.14!RUNX1T1;;chr3:44626446..44626477,+!p1@ZNF660!0.95!14.65!ZNF660;;chr1:214161272..214161322,+!p1@PROX1!0.95!11.39!PROX1;;chr2:10091815..10091864,+!p1@GRHL1!0.95!10.58!GRHL1;;chr9:16870659..16870675,-!p2@BNC2!0.95!9.77!BNC2;;chr17:59477233..59477263,+!p1@TBX2!0.94!24.41!TBX2;;chr17:7492684..7492778,-!p2@SOX15!0.94!16.68!SOX15;;chr15:37390850..37390909,-!p3@MEIS2!0.94!15.46!MEIS2;;chr10:119302150..119302163,+!p8@EMX2!0.94!7.73!EMX2;;chr11:32457103..32457123,-!p3@WT1!0.94!7.73!WT1;;chr11:34642656..34642667,+!p2@EHF!0.94!7.73!EHF;;chr8:49833978..49833996,-!p1@SNAI2!0.93!160.32!SNAI2;;chr18:72922811..72922827,+!p1@TSHZ1!0.93!38.66!TSHZ1;;chr7:19157248..19157268,-!p1@TWIST1!0.93!21.57!TWIST1;;chr1:61548069..61548102,+!p3@NFIA!0.93!18.72!NFIA;;chr18:53257027..53257052,-!p3@TCF4!0.92!30.52!TCF4;;chr18:52989031..52989079,-!p2@TCF4!0.92!17.90!TCF4;;chr17:35294075..35294102,+!p1@ENST00000559335!0.92!7.32!LHX1;;chr2:176969179..176969226,+!p2@HOXD11!0.92!7.32!HOXD11;;chr9:16575347..16575359,-!p12@BNC2!0.92!7.32!BNC2;;chr5:50679228..50679288,+!p1@ISL1!0.92!7.32!ISL1;;chr8:93115584..93115642,-!p5@RUNX1T1!0.92!7.32!RUNX1T1;;chr3:69788576..69788648,+!p1@MITF!0.91!39.47!MITF;;chr20:45142154..45142227,-!p1@ZNF334!0.90!14.24!ZNF334;;chr12:54785074..54785122,-!p2@ZNF385A!0.90!10.99!ZNF385A;;chr10:131762504..131762555,-!p1@EBF3!0.90!6.92!EBF3;;chr5:158527104..158527135,-!p4@EBF1!0.90!6.92!EBF1;;chr8:30890810..30890880,-!p1@PURG!0.90!6.92!PURG;;chr8:93115274..93115323,-!p4@RUNX1T1!0.90!6.92!RUNX1T1;;chr5:92918919..92918942,+!p1@NR2F1!0.89!31.33!NR2F1;;chr8:25902876..25902936,-!p1@EBF2!0.88!6.51!EBF2;;chr10:119302645..119302712,+!p3@EMX2!0.88!6.51!EMX2;;chr17:48072574..48072597,-!p1@DLX3!0.88!6.51!DLX3;;chr2:27371866..27371878,+!p3@TCF23!0.88!6.51!TCF23;;chr4:109090075..109090095,-!p2@LEF1!0.88!6.51!LEF1;;chr4:174451350..174451363,-!p3@HAND2!0.88!6.51!HAND2;;chr2:145277640..145277771,-!p1@ZEB2!0.87!91.14!ZEB2;;chr6:21597765..21597779,+!p2@SOX4!0.87!54.93!SOX4;;chr12:96588368..96588394,+!p3@ELK3!0.86!17.50!ELK3;;chr4:57522166..57522260,-!p2@HOPX!0.86!7.32!HOPX;;chr15:37392724..37392757,-!p1@MEIS2!0.85!29.70!MEIS2;;chr16:85932760..85932775,+!p1@IRF8!0.85!6.10!IRF8;;chr10:119303078..119303169,+!p2@EMX2!0.85!6.10!EMX2;;chr10:31610110..31610159,+!p2@ZEB1!0.85!6.10!ZEB1;;chr11:65554528..65554546,+!p1@OVOL1!0.85!6.10!OVOL1;;chr12:115122318..115122331,-!p2@TBX3!0.85!6.10!TBX3;;chr6:152128325..152128339,+!p10@ESR1!0.85!6.10!ESR1;;chr3:114173720..114173794,-!p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| ||
Line 38: | Line 41: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/uterus%252c%2520fetal%252c%2520donor1.CNhs11763.10055-101H1.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/uterus%252c%2520fetal%252c%2520donor1.CNhs11763.10055-101H1.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/uterus%252c%2520fetal%252c%2520donor1.CNhs11763.10055-101H1.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/uterus%252c%2520fetal%252c%2520donor1.CNhs11763.10055-101H1.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/uterus%252c%2520fetal%252c%2520donor1.CNhs11763.10055-101H1.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:10055-101H1 | |id=FF:10055-101H1 | ||
|is_a=EFO:0002091;;FF:0010055 | |is_a=EFO:0002091;;FF:0010055 | ||
|is_obsolete= | |is_obsolete= | ||
|library_id=CNhs11763 | |||
|library_id_phase_based=2:CNhs11763 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10055 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10055 | |||
|name=uterus, fetal, donor1 | |name=uterus, fetal, donor1 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
Line 46: | Line 60: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs11763,LSID820,release009,COMPLETED | |profile_hcage=CNhs11763,LSID820,release009,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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| |||
|rna_box=101 | |rna_box=101 | ||
|rna_catalog_number=Cat:RtHFN: Uterus | |rna_catalog_number=Cat:RtHFN: Uterus | ||
Line 61: | Line 78: | ||
|rna_weight_ug=10 | |rna_weight_ug=10 | ||
|sample_age= | |sample_age= | ||
|sample_category=tissues | |||
|sample_cell_catalog=NA | |sample_cell_catalog=NA | ||
|sample_cell_line= | |sample_cell_line= | ||
Line 82: | Line 100: | ||
|top_motifs=MYBL2:2.63557593049;ZNF384:2.50080012854;TBP:2.45654330448;HBP1_HMGB_SSRP1_UBTF:2.44650011245;NKX2-3_NKX2-5:2.43206408597;TAL1_TCF{3,4,12}:2.42994042487;RBPJ:2.33071266631;PRDM1:2.27604996551;MAZ:2.18664862448;MZF1:2.15591842383;RXRA_VDR{dimer}:2.14349146575;CDC5L:2.08214380395;NKX2-1,4:2.05325789498;GATA4:1.92737682864;TFAP2{A,C}:1.85401055741;PATZ1:1.84918560649;FOXM1:1.70604733162;CDX1,2,4:1.70481400275;XCPE1{core}:1.70283046529;ZNF238:1.67245686051;MED-1{core}:1.66351439402;TEF:1.64942697125;GTF2I:1.64211147148;SRF:1.64157949207;IKZF2:1.62048862204;TFAP4:1.61617598495;IKZF1:1.54305135569;EP300:1.48753932679;FOXP1:1.48242896334;ZIC1..3:1.47572378276;SP1:1.47422062744;POU5F1:1.46420173337;KLF4:1.44776140643;T:1.43360296938;HMGA1,2:1.41688781656;MYFfamily:1.41328664898;HIC1:1.4114212416;SMAD1..7,9:1.38070118599;EGR1..3:1.35837041576;GZF1:1.35403472722;ALX1:1.33430008911;AIRE:1.31830688418;PAX5:1.26804061822;POU3F1..4:1.26512764779;SOX5:1.25197826829;GFI1:1.24582381337;FOXD3:1.19402575047;GCM1,2:1.19160373645;TFAP2B:1.17561426945;SPZ1:1.15638826506;XBP1:1.09333583857;POU1F1:1.03878859938;PAX4:0.998756981967;ESR1:0.997058257177;ZNF148:0.964792912147;VSX1,2:0.963400865505;NFATC1..3:0.947601349697;HOX{A6,A7,B6,B7}:0.927356328999;ZNF423:0.908857712062;TFCP2:0.904411427781;BREu{core}:0.903212575342;PAX6:0.891498422494;GFI1B:0.879608373182;MTE{core}:0.876796235968;HOX{A4,D4}:0.873314198564;TLX1..3_NFIC{dimer}:0.873271965194;GLI1..3:0.87270859889;TEAD1:0.835537947122;RREB1:0.826549088565;GTF2A1,2:0.790808975255;LEF1_TCF7_TCF7L1,2:0.763195215161;BPTF:0.752361151378;DBP:0.726565507259;FOXL1:0.722210473441;ADNP_IRX_SIX_ZHX:0.72181011226;ZBTB16:0.715750699653;LHX3,4:0.707600303685;ZFP161:0.691481390211;SOX2:0.687328977695;FOX{I1,J2}:0.677551588091;NR3C1:0.661137622092;SOX{8,9,10}:0.633077852387;NANOG:0.629996463302;PRRX1,2:0.615392533689;UFEwm:0.608446466084;NR6A1:0.606073672794;AR:0.600464133829;SNAI1..3:0.590376278896;LMO2:0.580177705168;TOPORS:0.575992048572;CUX2:0.571455698691;TBX4,5:0.568500397003;REST:0.485702216168;RFX1:0.4682164401;MTF1:0.441696654652;POU6F1:0.418859847307;HAND1,2:0.409476920002;NKX6-1,2:0.40165918715;TGIF1:0.390073353907;SOX17:0.378167284187;FOX{D1,D2}:0.366806456271;NR5A1,2:0.31985697699;TP53:0.302852595664;MEF2{A,B,C,D}:0.264584708988;TLX2:0.252809939124;ARID5B:0.242528532441;ATF2:0.202975564094;NR1H4:0.202847198674;NHLH1,2:0.198583642353;FOXN1:0.190162396011;TFDP1:0.134100625777;HMX1:0.128647547745;FOXO1,3,4:0.115741260391;E2F1..5:0.115389398275;RORA:0.103254273399;PAX3,7:0.102193445113;GATA6:0.070647787248;STAT1,3:0.0475530998455;ZNF143:0.0463217651762;ALX4:0.0406785097543;ZEB1:0.0358058253057;IRF7:0.0188977705163;HNF1A:0.00672354387044;HSF1,2:0.00591438005256;NFY{A,B,C}:-8.09596752957e-05;NRF1:-0.00589135999415;ONECUT1,2:-0.00728719812264;NKX3-1:-0.0205938006779;HIF1A:-0.0522305613998;ATF6:-0.0540887773983;NKX3-2:-0.0694494405568;FOXQ1:-0.0855223198726;EBF1:-0.0884317640179;PBX1:-0.095228518219;OCT4_SOX2{dimer}:-0.116266804494;PITX1..3:-0.121267155621;ZBTB6:-0.126046820708;RXR{A,B,G}:-0.141031734671;SPIB:-0.141420497437;POU2F1..3:-0.169363354782;PAX8:-0.185120931284;ETS1,2:-0.220026374821;JUN:-0.25432203011;STAT2,4,6:-0.256503762503;NANOG{mouse}:-0.274903909895;PDX1:-0.278418790259;FOXA2:-0.281508474461;FOXP3:-0.296449906775;HOX{A5,B5}:-0.304030170837;YY1:-0.341139743678;IRF1,2:-0.35337364008;ATF4:-0.360435210559;ELF1,2,4:-0.406252826356;EVI1:-0.409897906468;SREBF1,2:-0.413067054033;SPI1:-0.444752729573;HNF4A_NR2F1,2:-0.476213436232;CREB1:-0.495395919113;FOS_FOS{B,L1}_JUN{B,D}:-0.508180673162;AHR_ARNT_ARNT2:-0.518693318279;RFX2..5_RFXANK_RFXAP:-0.528073192878;PPARG:-0.575575089639;DMAP1_NCOR{1,2}_SMARC:-0.590762936276;HLF:-0.710576585667;NFKB1_REL_RELA:-0.730180071895;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.735158699647;FOSL2:-0.739549189028;NKX2-2,8:-0.813203140312;NFIX:-0.818516827145;BACH2:-0.83437450151;MYOD1:-0.841280993346;CEBPA,B_DDIT3:-0.930448081245;RUNX1..3:-0.931067915298;EN1,2:-0.947814672128;STAT5{A,B}:-0.9520778527;MAFB:-0.965412552501;PAX1,9:-0.982290185928;NFE2:-0.984658056196;FOX{F1,F2,J1}:-0.985617161304;MYB:-1.04271111551;HOXA9_MEIS1:-1.05487692975;ESRRA:-1.09697973492;ATF5_CREB3:-1.14439879664;CRX:-1.16095634047;NFIL3:-1.19005652763;ELK1,4_GABP{A,B1}:-1.21118829175;NFE2L2:-1.227660671;PAX2:-1.25053205598;HES1:-1.35064913107;NFE2L1:-1.52344422222;bHLH_family:-1.9622131209;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-2.01983128225 | |top_motifs=MYBL2:2.63557593049;ZNF384:2.50080012854;TBP:2.45654330448;HBP1_HMGB_SSRP1_UBTF:2.44650011245;NKX2-3_NKX2-5:2.43206408597;TAL1_TCF{3,4,12}:2.42994042487;RBPJ:2.33071266631;PRDM1:2.27604996551;MAZ:2.18664862448;MZF1:2.15591842383;RXRA_VDR{dimer}:2.14349146575;CDC5L:2.08214380395;NKX2-1,4:2.05325789498;GATA4:1.92737682864;TFAP2{A,C}:1.85401055741;PATZ1:1.84918560649;FOXM1:1.70604733162;CDX1,2,4:1.70481400275;XCPE1{core}:1.70283046529;ZNF238:1.67245686051;MED-1{core}:1.66351439402;TEF:1.64942697125;GTF2I:1.64211147148;SRF:1.64157949207;IKZF2:1.62048862204;TFAP4:1.61617598495;IKZF1:1.54305135569;EP300:1.48753932679;FOXP1:1.48242896334;ZIC1..3:1.47572378276;SP1:1.47422062744;POU5F1:1.46420173337;KLF4:1.44776140643;T:1.43360296938;HMGA1,2:1.41688781656;MYFfamily:1.41328664898;HIC1:1.4114212416;SMAD1..7,9:1.38070118599;EGR1..3:1.35837041576;GZF1:1.35403472722;ALX1:1.33430008911;AIRE:1.31830688418;PAX5:1.26804061822;POU3F1..4:1.26512764779;SOX5:1.25197826829;GFI1:1.24582381337;FOXD3:1.19402575047;GCM1,2:1.19160373645;TFAP2B:1.17561426945;SPZ1:1.15638826506;XBP1:1.09333583857;POU1F1:1.03878859938;PAX4:0.998756981967;ESR1:0.997058257177;ZNF148:0.964792912147;VSX1,2:0.963400865505;NFATC1..3:0.947601349697;HOX{A6,A7,B6,B7}:0.927356328999;ZNF423:0.908857712062;TFCP2:0.904411427781;BREu{core}:0.903212575342;PAX6:0.891498422494;GFI1B:0.879608373182;MTE{core}:0.876796235968;HOX{A4,D4}:0.873314198564;TLX1..3_NFIC{dimer}:0.873271965194;GLI1..3:0.87270859889;TEAD1:0.835537947122;RREB1:0.826549088565;GTF2A1,2:0.790808975255;LEF1_TCF7_TCF7L1,2:0.763195215161;BPTF:0.752361151378;DBP:0.726565507259;FOXL1:0.722210473441;ADNP_IRX_SIX_ZHX:0.72181011226;ZBTB16:0.715750699653;LHX3,4:0.707600303685;ZFP161:0.691481390211;SOX2:0.687328977695;FOX{I1,J2}:0.677551588091;NR3C1:0.661137622092;SOX{8,9,10}:0.633077852387;NANOG:0.629996463302;PRRX1,2:0.615392533689;UFEwm:0.608446466084;NR6A1:0.606073672794;AR:0.600464133829;SNAI1..3:0.590376278896;LMO2:0.580177705168;TOPORS:0.575992048572;CUX2:0.571455698691;TBX4,5:0.568500397003;REST:0.485702216168;RFX1:0.4682164401;MTF1:0.441696654652;POU6F1:0.418859847307;HAND1,2:0.409476920002;NKX6-1,2:0.40165918715;TGIF1:0.390073353907;SOX17:0.378167284187;FOX{D1,D2}:0.366806456271;NR5A1,2:0.31985697699;TP53:0.302852595664;MEF2{A,B,C,D}:0.264584708988;TLX2:0.252809939124;ARID5B:0.242528532441;ATF2:0.202975564094;NR1H4:0.202847198674;NHLH1,2:0.198583642353;FOXN1:0.190162396011;TFDP1:0.134100625777;HMX1:0.128647547745;FOXO1,3,4:0.115741260391;E2F1..5:0.115389398275;RORA:0.103254273399;PAX3,7:0.102193445113;GATA6:0.070647787248;STAT1,3:0.0475530998455;ZNF143:0.0463217651762;ALX4:0.0406785097543;ZEB1:0.0358058253057;IRF7:0.0188977705163;HNF1A:0.00672354387044;HSF1,2:0.00591438005256;NFY{A,B,C}:-8.09596752957e-05;NRF1:-0.00589135999415;ONECUT1,2:-0.00728719812264;NKX3-1:-0.0205938006779;HIF1A:-0.0522305613998;ATF6:-0.0540887773983;NKX3-2:-0.0694494405568;FOXQ1:-0.0855223198726;EBF1:-0.0884317640179;PBX1:-0.095228518219;OCT4_SOX2{dimer}:-0.116266804494;PITX1..3:-0.121267155621;ZBTB6:-0.126046820708;RXR{A,B,G}:-0.141031734671;SPIB:-0.141420497437;POU2F1..3:-0.169363354782;PAX8:-0.185120931284;ETS1,2:-0.220026374821;JUN:-0.25432203011;STAT2,4,6:-0.256503762503;NANOG{mouse}:-0.274903909895;PDX1:-0.278418790259;FOXA2:-0.281508474461;FOXP3:-0.296449906775;HOX{A5,B5}:-0.304030170837;YY1:-0.341139743678;IRF1,2:-0.35337364008;ATF4:-0.360435210559;ELF1,2,4:-0.406252826356;EVI1:-0.409897906468;SREBF1,2:-0.413067054033;SPI1:-0.444752729573;HNF4A_NR2F1,2:-0.476213436232;CREB1:-0.495395919113;FOS_FOS{B,L1}_JUN{B,D}:-0.508180673162;AHR_ARNT_ARNT2:-0.518693318279;RFX2..5_RFXANK_RFXAP:-0.528073192878;PPARG:-0.575575089639;DMAP1_NCOR{1,2}_SMARC:-0.590762936276;HLF:-0.710576585667;NFKB1_REL_RELA:-0.730180071895;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.735158699647;FOSL2:-0.739549189028;NKX2-2,8:-0.813203140312;NFIX:-0.818516827145;BACH2:-0.83437450151;MYOD1:-0.841280993346;CEBPA,B_DDIT3:-0.930448081245;RUNX1..3:-0.931067915298;EN1,2:-0.947814672128;STAT5{A,B}:-0.9520778527;MAFB:-0.965412552501;PAX1,9:-0.982290185928;NFE2:-0.984658056196;FOX{F1,F2,J1}:-0.985617161304;MYB:-1.04271111551;HOXA9_MEIS1:-1.05487692975;ESRRA:-1.09697973492;ATF5_CREB3:-1.14439879664;CRX:-1.16095634047;NFIL3:-1.19005652763;ELK1,4_GABP{A,B1}:-1.21118829175;NFE2L2:-1.227660671;PAX2:-1.25053205598;HES1:-1.35064913107;NFE2L1:-1.52344422222;bHLH_family:-1.9622131209;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-2.01983128225 | ||
|xref= | |xref= | ||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10055-101H1;search_select_hide=table117:FF:10055-101H1 | |||
}} | }} |
Latest revision as of 12:18, 3 June 2020
Name: | uterus, fetal, donor1 |
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Species: | Human (Homo sapiens) |
Library ID: | CNhs11763 |
Sample type: | tissues |
Genomic View: | UCSC |
RefEX: | Specific genes |
CAGEd-oPOSSUM: | link |
ZENBU report : | link |
Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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Download raw sequence, BAM & CTSS | ||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11763
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11763
Novel motif | Logo | P-value |
---|---|---|
1 | 1 | 0.01 |
10 | 10 | 0.0443 |
100 | 100 | 0.311 |
101 | 101 | 0.53 |
102 | 102 | 0.526 |
103 | 103 | 0.247 |
104 | 104 | 0.712 |
105 | 105 | 0.873 |
106 | 106 | 0.238 |
107 | 107 | 0.678 |
108 | 108 | 0.877 |
109 | 109 | 0.00727 |
11 | 11 | 0.0801 |
110 | 110 | 0.191 |
111 | 111 | 0.0086 |
112 | 112 | 0.211 |
113 | 113 | 0.0367 |
114 | 114 | 7.1111e-4 |
115 | 115 | 0.184 |
116 | 116 | 0.933 |
117 | 117 | 0.00414 |
118 | 118 | 0.0792 |
119 | 119 | 0.409 |
12 | 12 | 0.278 |
120 | 120 | 0.388 |
121 | 121 | 0.751 |
122 | 122 | 0.306 |
123 | 123 | 0.0552 |
124 | 124 | 0.895 |
125 | 125 | 0.278 |
126 | 126 | 0.519 |
127 | 127 | 0.0687 |
128 | 128 | 0.543 |
129 | 129 | 0.775 |
13 | 13 | 0.0657 |
130 | 130 | 0.36 |
131 | 131 | 0.91 |
132 | 132 | 0.129 |
133 | 133 | 0.972 |
134 | 134 | 0.843 |
135 | 135 | 0.777 |
136 | 136 | 0.652 |
137 | 137 | 0.134 |
138 | 138 | 0.252 |
139 | 139 | 0.155 |
14 | 14 | 0.403 |
140 | 140 | 0.865 |
141 | 141 | 0.602 |
142 | 142 | 0.592 |
143 | 143 | 0.0209 |
144 | 144 | 0.777 |
145 | 145 | 0.839 |
146 | 146 | 0.412 |
147 | 147 | 0.821 |
148 | 148 | 0.0233 |
149 | 149 | 0.659 |
15 | 15 | 0.0275 |
150 | 150 | 0.486 |
151 | 151 | 0.357 |
152 | 152 | 0.222 |
153 | 153 | 0.846 |
154 | 154 | 0.913 |
155 | 155 | 0.0806 |
156 | 156 | 0.61 |
157 | 157 | 0.522 |
158 | 158 | 0.12 |
159 | 159 | 0.621 |
16 | 16 | 0.412 |
160 | 160 | 0.704 |
161 | 161 | 0.624 |
162 | 162 | 0.135 |
163 | 163 | 0.534 |
164 | 164 | 0.0444 |
165 | 165 | 0.441 |
166 | 166 | 0.0886 |
167 | 167 | 0.0261 |
168 | 168 | 0.242 |
169 | 169 | 0.0252 |
17 | 17 | 0.325 |
18 | 18 | 0.0299 |
19 | 19 | 1 |
2 | 2 | 0.602 |
20 | 20 | 0.231 |
21 | 21 | 0.399 |
22 | 22 | 0.465 |
23 | 23 | 0.666 |
24 | 24 | 0.108 |
25 | 25 | 0.31 |
26 | 26 | 0.0212 |
27 | 27 | 0.733 |
28 | 28 | 0.668 |
29 | 29 | 0.0208 |
3 | 3 | 0.213 |
30 | 30 | 0.135 |
31 | 31 | 0.843 |
32 | 32 | 0.0128 |
33 | 33 | 0.188 |
34 | 34 | 0.652 |
35 | 35 | 0.166 |
36 | 36 | 0.0205 |
37 | 37 | 0.0206 |
38 | 38 | 0.27 |
39 | 39 | 0.668 |
4 | 4 | 0.9 |
40 | 40 | 0.0635 |
41 | 41 | 0.0256 |
42 | 42 | 0.23 |
43 | 43 | 0.13 |
44 | 44 | 0.958 |
45 | 45 | 0.527 |
46 | 46 | 0.136 |
47 | 47 | 0.0539 |
48 | 48 | 0.227 |
49 | 49 | 0.108 |
5 | 5 | 0.27 |
50 | 50 | 0.936 |
51 | 51 | 0.565 |
52 | 52 | 0.712 |
53 | 53 | 0.815 |
54 | 54 | 0.668 |
55 | 55 | 0.602 |
56 | 56 | 0.511 |
57 | 57 | 0.198 |
58 | 58 | 0.408 |
59 | 59 | 0.354 |
6 | 6 | 0.963 |
60 | 60 | 0.402 |
61 | 61 | 0.352 |
62 | 62 | 0.218 |
63 | 63 | 0.398 |
64 | 64 | 0.36 |
65 | 65 | 0.324 |
66 | 66 | 0.757 |
67 | 67 | 0.468 |
68 | 68 | 0.448 |
69 | 69 | 0.606 |
7 | 7 | 0.153 |
70 | 70 | 0.0179 |
71 | 71 | 0.0477 |
72 | 72 | 0.313 |
73 | 73 | 0.0195 |
74 | 74 | 0.477 |
75 | 75 | 0.00437 |
76 | 76 | 0.136 |
77 | 77 | 0.813 |
78 | 78 | 0.172 |
79 | 79 | 0.822 |
8 | 8 | 0.09 |
80 | 80 | 0.581 |
81 | 81 | 0.676 |
82 | 82 | 0.373 |
83 | 83 | 0.596 |
84 | 84 | 0.725 |
85 | 85 | 0.327 |
86 | 86 | 0.0759 |
87 | 87 | 0.0188 |
88 | 88 | 0.801 |
89 | 89 | 0.312 |
9 | 9 | 0.826 |
90 | 90 | 0.177 |
91 | 91 | 0.502 |
92 | 92 | 0.433 |
93 | 93 | 0.202 |
94 | 94 | 0.0341 |
95 | 95 | 0.00602 |
96 | 96 | 0.0999 |
97 | 97 | 0.932 |
98 | 98 | 0.131 |
99 | 99 | 0.416 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11763
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0010055 human uterus - fetal sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
UBERON: Anatomy
0000468 (multi-cellular organism)
0000922 (embryo)
0005795 (embryonic uterus)
0000479 (tissue)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0002050 (embryonic structure)
0005423 (developing anatomical structure)
0001062 (anatomical entity)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000999 (fetal tissue sample)
0000004 (tissue sample)
0010055 (human uterus - fetal sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0005795 (embryonic uterus)