FF:11389-118C3: Difference between revisions
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{{f5samples | {{f5samples | ||
|DRA_sample_Accession=CAGE@SAMD00005152 | |||
|DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00005152 | |||
|accession_numbers=CAGE;DRX008324;DRR009196;DRZ000621;DRZ002006;DRZ011971;DRZ013356 | |||
|accession_numbers_RNASeq=sRNA-Seq;DRX037086;DRR041452;DRZ007094 | |||
|ancestors_in_anatomy_facet= | |ancestors_in_anatomy_facet= | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0000763,CL:0002371,CL:0000766,CL:0000219,CL:0000325,CL:0000473,CL:0000234,CL:0000738,CL:0000255,CL:0000235 | |ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0000763,CL:0002371,CL:0000766,CL:0000219,CL:0000325,CL:0000473,CL:0000234,CL:0000738,CL:0000255,CL:0000235 | ||
Line 7: | Line 11: | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|datafreeze_phase= | |data_phase=2 | ||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score=chr2:68592406..68592424,+!p1@PLEK!2.71!510.99!PLEK;;chr11:47400078..47400106,-!p1@SPI1!2.51!320.15!SPI1;;chr12:54778471..54778528,-!p1@ZNF385A!2.35!220.72!ZNF385A;;chr11:47279504..47279563,+!p1@NR1H3!2.10!271.55!NR1H3;;chr11:47400062..47400077,-!p2@SPI1!2.02!102.70!SPI1;;chr7:115670804..115670825,-!p1@TFEC!1.98!94.08!TFEC;;chr16:85932760..85932775,+!p1@IRF8!1.86!70.90!IRF8;;chr20:39317868..39317884,-!p1@MAFB!1.71!561.53!MAFB;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.70!49.20!ZBED1;;chr10:31288398..31288455,-!p2@ZNF438!1.63!47.86!ZNF438;;chr10:64576105..64576133,-!p1@EGR2!1.54!67.48!EGR2;;chr11:47399996..47400014,-!p4@SPI1!1.53!32.85!SPI1;;chr19:33793430..33793447,-!p1@CEBPA!1.52!129.46!CEBPA;;chr7:137620684..137620711,-!p4@CREB3L2!1.51!31.66!CREB3L2;;chr7:128577972..128578047,+!p1@IRF5!1.48!45.33!IRF5;;chr11:47399947..47399961,-!p3@SPI1!1.47!28.39!SPI1;;chr7:137620650..137620677,-!p3@CREB3L2!1.43!25.86!CREB3L2;;chr7:50344289..50344323,+!p1@IKZF1!1.42!25.27!IKZF1;;chr11:47400032..47400043,-!p5@SPI1!1.40!23.93!SPI1;;chr10:51572408..51572454,+!p3@NCOA4!1.39!132.88!NCOA4;;chr14:75988771..75988826,+!p1@BATF!1.30!25.27!BATF;;chr10:31288370..31288393,-!p3@ZNF438!1.29!18.58!ZNF438;;chr3:12330560..12330579,+!p1@PPARG!1.27!20.21!PPARG;;chr11:47400045..47400060,-!p6@SPI1!1.27!17.69!SPI1;;chr2:68592394..68592405,+!p2@PLEK!1.22!15.46!PLEK;;chr2:145277640..145277771,-!p1@ZEB2!1.21!202.14!ZEB2;;chr8:72756063..72756125,-!p1@MSC!1.20!30.02!MSC;;chr2:145277882..145277967,-!p3@ZEB2!1.20!25.56!ZEB2;;chr3:69788576..69788648,+!p1@MITF!1.17!72.98!MITF;;chr5:71803177..71803255,-!p1@ZNF366!1.17!13.82!ZNF366;;chr12:26277956..26277980,-!p1@BHLHE41!1.13!45.33!BHLHE41;;chr16:79634624..79634642,-!p1@MAF!1.11!46.82!MAF;;chr7:50343634..50343717,+!p2@IKZF1!1.11!11.89!IKZF1;;chr12:12764995..12765017,+!p3@CREBL2!1.10!16.50!CREBL2;;chr19:13213662..13213686,-!p1@LYL1!1.09!16.65!LYL1;;chr19:50432132..50432217,+!p2@ATF5!1.04!11.89!ATF5;;chr6:44233252..44233296,-!p1@NFKBIE!0.98!85.76!NFKBIE;;chr19:13213954..13214021,-!p4@LYL1!0.98!8.62!LYL1;;chr2:70142232..70142251,+!p1@MXD1!0.96!47.12!MXD1;;chr10:64018918..64018936,+!p2@ZNF365!0.95!7.88!ZNF365;;chr17:40440481..40440550,+!p1@STAT5A!0.92!54.55!STAT5A;;chr12:12764947..12764986,+!p2@CREBL2!0.92!14.57!CREBL2;;chr19:13213704..13213726,-!p3@LYL1!0.91!9.51!LYL1;;chr1:158985493..158985535,+!p4@IFI16!0.88!10.40!IFI16;;chr12:26277929..26277955,-!p3@BHLHE41!0.88!9.51!BHLHE41;;chr1:23857698..23857733,-!p1@E2F2!0.86!11.74!E2F2;;chr6:144385698..144385742,-!p2@PLAGL1!0.85!7.58!PLAGL1;;chr11:47279568..47279577,+!p8@NR1H3!0.85!6.09!NR1H3;;chr1:212738742..212738755,+!p2@ATF3!0.84!5.95!ATF3;;chr11:128563948..128564003,+!p1@FLI1!0.83!75.36!FLI1;;chr10:51572339..51572376,+!p4@NCOA4!0.83!13.53!NCOA4;;chr7:149470641..149470694,-!p1@ZNF467!0.82!27.05!ZNF467;;chr18:6414884..6414942,-!p1@L3MBTL4!0.82!7.13!L3MBTL4;;chr11:47399920..47399931,-!p7@SPI1!0.82!5.65!SPI1;;chr7:139762641..139762768,-!p1@PARP12!0.79!77.44!PARP12;;chr9:137217986..137218049,+!p3@RXRA!0.78!15.61!RXRA;;chr20:48807456..48807475,+!p3@CEBPB!0.78!10.26!CEBPB;;chr8:53373491..53373506,-!p4@ST18!0.78!5.05!ST18;;chr2:231090433..231090469,+!p1@SP140!0.78!5.05!SP140;;chr19:42636586..42636607,-!p1@POU2F2!0.77!14.57!POU2F2;;chr16:79634595..79634620,-!p2@MAF!0.77!9.51!MAF;;chr1:212782094..212782109,+!p1@ATF3!0.76!144.32!ATF3;;chr2:145275162..145275202,-!p2@ZEB2!0.76!30.92!ZEB2;;chr10:94449703..94449718,+!p1@HHEX!0.76!20.07!HHEX;;chr11:65554528..65554546,+!p1@OVOL1!0.76!4.76!OVOL1;;chr7:115670792..115670797,-!p2@TFEC!0.76!4.76!TFEC;;chr5:142814364..142814381,-!p22@NR3C1!0.75!4.61!NR3C1;;chr8:72756213..72756243,-!p5@MSC!0.74!5.95!MSC;;chr19:10416315..10416333,-!p1@ZGLP1!0.74!4.46!ZGLP1;;chr13:41593425..41593480,-!p1@ELF1!0.73!30.92!ELF1;;chr2:113999360..113999386,-!p4@PAX8!0.73!4.31!PAX8;;chr18:52989031..52989079,-!p2@TCF4!0.72!10.85!TCF4;;chr19:35759824..35759891,+!p1@USF2!0.71!144.77!USF2;;chr2:231090344..231090361,-!p3@SP110!0.71!4.16!SP110;;chr11:47279491..47279502,+!p6@NR1H3!0.71!4.16!NR1H3;;chr12:26277817..26277863,-!p2@BHLHE41!0.69!5.50!BHLHE41;;chr16:88752889..88752921,-!p1@SNAI3!0.69!4.61!SNAI3;;chr6:41691289..41691312,-!p9@TFEB!0.69!3.86!TFEB;;chr16:31885093..31885165,+!p1@ZNF267!0.68!67.33!ZNF267;;chrX:131623044..131623089,-!p1@MBNL3!0.68!17.69!MBNL3;;chr19:36391434..36391450,-!p1@NFKBID!0.68!8.17!NFKBID;;chr20:48807351..48807384,+!p1@CEBPB!0.67!441.29!CEBPB;;chr3:48282587..48282603,+!p1@ZNF589!0.67!18.58!ZNF589;;chr6:35310395..35310410,+!p2@PPARD!0.67!16.35!PPARD;;chr12:54778351..54778378,-!p6@ZNF385A!0.67!3.72!ZNF385A;;chr2:122042770..122042785,-!p1@TFCP2L1!0.67!3.72!TFCP2L1;;chr8:72756267..72756296,-!p4@MSC!0.66!5.50!MSC;;chr6:152011654..152011682,+!p1@ESR1!0.66!3.57!ESR1;;chr3:129158715..129158766,-!p2@MBD4!0.65!38.94!MBD4;;chr6:35310363..35310382,+!p3@PPARD!0.65!14.71!PPARD;;chr19:926001..926046,+!p1@ARID3A!0.65!13.82!ARID3A;;chr10:35484804..35484902,+!p2@CREM!0.64!14.86!CREM;;chr8:116680215..116680245,-!p6@TRPS1!0.64!5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| |expression_enrichment_score=chr2:68592406..68592424,+!p1@PLEK!2.71!510.99!PLEK;;chr11:47400078..47400106,-!p1@SPI1!2.51!320.15!SPI1;;chr12:54778471..54778528,-!p1@ZNF385A!2.35!220.72!ZNF385A;;chr11:47279504..47279563,+!p1@NR1H3!2.10!271.55!NR1H3;;chr11:47400062..47400077,-!p2@SPI1!2.02!102.70!SPI1;;chr7:115670804..115670825,-!p1@TFEC!1.98!94.08!TFEC;;chr16:85932760..85932775,+!p1@IRF8!1.86!70.90!IRF8;;chr20:39317868..39317884,-!p1@MAFB!1.71!561.53!MAFB;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.70!49.20!ZBED1;;chr10:31288398..31288455,-!p2@ZNF438!1.63!47.86!ZNF438;;chr10:64576105..64576133,-!p1@EGR2!1.54!67.48!EGR2;;chr11:47399996..47400014,-!p4@SPI1!1.53!32.85!SPI1;;chr19:33793430..33793447,-!p1@CEBPA!1.52!129.46!CEBPA;;chr7:137620684..137620711,-!p4@CREB3L2!1.51!31.66!CREB3L2;;chr7:128577972..128578047,+!p1@IRF5!1.48!45.33!IRF5;;chr11:47399947..47399961,-!p3@SPI1!1.47!28.39!SPI1;;chr7:137620650..137620677,-!p3@CREB3L2!1.43!25.86!CREB3L2;;chr7:50344289..50344323,+!p1@IKZF1!1.42!25.27!IKZF1;;chr11:47400032..47400043,-!p5@SPI1!1.40!23.93!SPI1;;chr10:51572408..51572454,+!p3@NCOA4!1.39!132.88!NCOA4;;chr14:75988771..75988826,+!p1@BATF!1.30!25.27!BATF;;chr10:31288370..31288393,-!p3@ZNF438!1.29!18.58!ZNF438;;chr3:12330560..12330579,+!p1@PPARG!1.27!20.21!PPARG;;chr11:47400045..47400060,-!p6@SPI1!1.27!17.69!SPI1;;chr2:68592394..68592405,+!p2@PLEK!1.22!15.46!PLEK;;chr2:145277640..145277771,-!p1@ZEB2!1.21!202.14!ZEB2;;chr8:72756063..72756125,-!p1@MSC!1.20!30.02!MSC;;chr2:145277882..145277967,-!p3@ZEB2!1.20!25.56!ZEB2;;chr3:69788576..69788648,+!p1@MITF!1.17!72.98!MITF;;chr5:71803177..71803255,-!p1@ZNF366!1.17!13.82!ZNF366;;chr12:26277956..26277980,-!p1@BHLHE41!1.13!45.33!BHLHE41;;chr16:79634624..79634642,-!p1@MAF!1.11!46.82!MAF;;chr7:50343634..50343717,+!p2@IKZF1!1.11!11.89!IKZF1;;chr12:12764995..12765017,+!p3@CREBL2!1.10!16.50!CREBL2;;chr19:13213662..13213686,-!p1@LYL1!1.09!16.65!LYL1;;chr19:50432132..50432217,+!p2@ATF5!1.04!11.89!ATF5;;chr6:44233252..44233296,-!p1@NFKBIE!0.98!85.76!NFKBIE;;chr19:13213954..13214021,-!p4@LYL1!0.98!8.62!LYL1;;chr2:70142232..70142251,+!p1@MXD1!0.96!47.12!MXD1;;chr10:64018918..64018936,+!p2@ZNF365!0.95!7.88!ZNF365;;chr17:40440481..40440550,+!p1@STAT5A!0.92!54.55!STAT5A;;chr12:12764947..12764986,+!p2@CREBL2!0.92!14.57!CREBL2;;chr19:13213704..13213726,-!p3@LYL1!0.91!9.51!LYL1;;chr1:158985493..158985535,+!p4@IFI16!0.88!10.40!IFI16;;chr12:26277929..26277955,-!p3@BHLHE41!0.88!9.51!BHLHE41;;chr1:23857698..23857733,-!p1@E2F2!0.86!11.74!E2F2;;chr6:144385698..144385742,-!p2@PLAGL1!0.85!7.58!PLAGL1;;chr11:47279568..47279577,+!p8@NR1H3!0.85!6.09!NR1H3;;chr1:212738742..212738755,+!p2@ATF3!0.84!5.95!ATF3;;chr11:128563948..128564003,+!p1@FLI1!0.83!75.36!FLI1;;chr10:51572339..51572376,+!p4@NCOA4!0.83!13.53!NCOA4;;chr7:149470641..149470694,-!p1@ZNF467!0.82!27.05!ZNF467;;chr18:6414884..6414942,-!p1@L3MBTL4!0.82!7.13!L3MBTL4;;chr11:47399920..47399931,-!p7@SPI1!0.82!5.65!SPI1;;chr7:139762641..139762768,-!p1@PARP12!0.79!77.44!PARP12;;chr9:137217986..137218049,+!p3@RXRA!0.78!15.61!RXRA;;chr20:48807456..48807475,+!p3@CEBPB!0.78!10.26!CEBPB;;chr8:53373491..53373506,-!p4@ST18!0.78!5.05!ST18;;chr2:231090433..231090469,+!p1@SP140!0.78!5.05!SP140;;chr19:42636586..42636607,-!p1@POU2F2!0.77!14.57!POU2F2;;chr16:79634595..79634620,-!p2@MAF!0.77!9.51!MAF;;chr1:212782094..212782109,+!p1@ATF3!0.76!144.32!ATF3;;chr2:145275162..145275202,-!p2@ZEB2!0.76!30.92!ZEB2;;chr10:94449703..94449718,+!p1@HHEX!0.76!20.07!HHEX;;chr11:65554528..65554546,+!p1@OVOL1!0.76!4.76!OVOL1;;chr7:115670792..115670797,-!p2@TFEC!0.76!4.76!TFEC;;chr5:142814364..142814381,-!p22@NR3C1!0.75!4.61!NR3C1;;chr8:72756213..72756243,-!p5@MSC!0.74!5.95!MSC;;chr19:10416315..10416333,-!p1@ZGLP1!0.74!4.46!ZGLP1;;chr13:41593425..41593480,-!p1@ELF1!0.73!30.92!ELF1;;chr2:113999360..113999386,-!p4@PAX8!0.73!4.31!PAX8;;chr18:52989031..52989079,-!p2@TCF4!0.72!10.85!TCF4;;chr19:35759824..35759891,+!p1@USF2!0.71!144.77!USF2;;chr2:231090344..231090361,-!p3@SP110!0.71!4.16!SP110;;chr11:47279491..47279502,+!p6@NR1H3!0.71!4.16!NR1H3;;chr12:26277817..26277863,-!p2@BHLHE41!0.69!5.50!BHLHE41;;chr16:88752889..88752921,-!p1@SNAI3!0.69!4.61!SNAI3;;chr6:41691289..41691312,-!p9@TFEB!0.69!3.86!TFEB;;chr16:31885093..31885165,+!p1@ZNF267!0.68!67.33!ZNF267;;chrX:131623044..131623089,-!p1@MBNL3!0.68!17.69!MBNL3;;chr19:36391434..36391450,-!p1@NFKBID!0.68!8.17!NFKBID;;chr20:48807351..48807384,+!p1@CEBPB!0.67!441.29!CEBPB;;chr3:48282587..48282603,+!p1@ZNF589!0.67!18.58!ZNF589;;chr6:35310395..35310410,+!p2@PPARD!0.67!16.35!PPARD;;chr12:54778351..54778378,-!p6@ZNF385A!0.67!3.72!ZNF385A;;chr2:122042770..122042785,-!p1@TFCP2L1!0.67!3.72!TFCP2L1;;chr8:72756267..72756296,-!p4@MSC!0.66!5.50!MSC;;chr6:152011654..152011682,+!p1@ESR1!0.66!3.57!ESR1;;chr3:129158715..129158766,-!p2@MBD4!0.65!38.94!MBD4;;chr6:35310363..35310382,+!p3@PPARD!0.65!14.71!PPARD;;chr19:926001..926046,+!p1@ARID3A!0.65!13.82!ARID3A;;chr10:35484804..35484902,+!p2@CREM!0.64!14.86!CREM;;chr8:116680215..116680245,-!p6@TRPS1!0.64!5.65!TRPS1;;chr19:45252008..45252024,+!p2@BCL3!0.63!12.34!BCL3;;chr2:208031943..208031978,-!p5@KLF7!0.63!4.61!KLF7;;chr1:8484007..8484061,-!p13@RERE!0.63!4.31!RERE;;chr22:38609611..38609624,+!p5@MAFF!0.63!3.27!MAFF;;chr16:67198683..67198698,+!p2@HSF4!0.63!3.27!HSF4;;chr8:102216978..102217003,-!p4@ZNF706!0.63!3.27!ZNF706;;chr19:49140609..49140643,-!p1@DBP!0.62!21.25!DBP;;chr1:40367530..40367597,-!p1@MYCL1!0.62!6.24!MYCL1;;chr19:50432104..50432126,+!p6@ATF5!0.62!3.12!ATF5;;chr16:88752861..88752884,-!p2@SNAI3!0.62!3.12!SNAI3;;chr16:79633894..79633954,-!p3@MAF!0.61!6.54!MAF;;chr1:158979872..158979898,+!p3@IFI16!0.60!10.70!IFI16;;chr10:94449675..94449694,+!p2@HHEX!0.60!9.22!HHEX;;chr5:142814347..142814358,-!p27@NR3C1!0.60!2.97!NR3C1;;chr6:41673552..41673571,-!p10@TFEB!0.60!2.97!TFEB;;chr21:36421535..36421610,-!p2@RUNX1!0.59!12.04!RUNX1;;chr2:185463247..185463263,+!p1@ZNF804A!0.59!5.65!ZNF804A;;chr13:27998831..27998851,+!p2@GTF3A!0.58!20.36!GTF3A;;chr8:72756667..72756736,-!p2@MSC!0.58!4.76!MSC;;chr2:97202480..97202499,+!p1@ARID5A!0.57!33.74!ARID5A;;chr5:88178983..88179012,-!p1@MEF2C!0.57!25.71!MEF2C;;chr12:11802753..11802834,+!p2@ETV6!0.57!16.20!ETV6;;chr3:187463179..187463201,-!p2@BCL6!0.57!13.38!BCL6;;chr16:73092791..73092831,-!p4@ZFHX3!0.57!5.50!ZFHX3;;chr16:67198633..67198671,+!p1@HSF4!0.57!2.68!HSF4;;chr7:139762438..139762447,-!p4@PARP12!0.57!2.68!PARP12;;chr5:142784003..142784065,-!p2@NR3C1!0.56!26.75!NR3C1;;chr2:238600789..238600925,+!p1@LRRFIP1!0.55!64.80!LRRFIP1;;chr2:61108695..61108753,+!p1@REL!0.55!21.85!REL;;chr1:38325256..38325280,-!p1@MTF1!0.55!19.62!MTF1;;chr12:48298785..48298828,-!p1@VDR!0.55!16.65!VDR;;chr15:31619535..31619569,+!p5@KLF13!0.55!5.35!KLF13;;chr22:38609570..38609585,+!p6@MAFF!0.55!2.53!MAFF;;chr7:50344251..50344288,+!p3@IKZF1!0.55!2.53!IKZF1;;chr6:34204973..34204990,+!p4@HMGA1!0.54!41.62!HMGA1;;chr14:21566731..21566836,-!p1@ZNF219!0.54!33.74!ZNF219;;chr5:176738887..176738934,-!p1@MXD3!0.54!20.51!MXD3;;chr6:15246200..15246214,+!p2@JARID2!0.54!8.17!JARID2;;chr10:35484053..35484076,+!p1@CREM!0.54!7.28!CREM;;chr19:926055..926068,+!p2@ARID3A!0.54!6.24!ARID3A;;chr2:28618532..28618610,+!p4@FOSL2!0.54!4.76!FOSL2;;chr18:52989081..52989117,-!p7@TCF4!0.54!4.16!TCF4;;chr14:68283291..68283323,-!p1@ZFYVE26!0.53!50.98!ZFYVE26;;chr16:68119324..68119364,+!p1@NFATC3!0.53!13.38!NFATC3;;chr9:137218362..137218385,+!p4@RXRA!0.53!7.58!RXRA;;chr16:68118689..68118733,+!p3@NFATC3!0.53!7.13!NFATC3;;chr8:72756023..72756055,-!p6@MSC!0.53!3.12!MSC;;chr16:31141328..31141350,+!p2@KAT8!0.53!2.38!KAT8;;chr18:45935720..45935772,-!p1@ZBTB7C!0.53!2.38!ZBTB7C;;chr2:145277589..145277612,-!p12@ZEB2!0.53!2.38!ZEB2;;chr2:145277792..145277808,-!p15@ZEB2!0.53!2.38!ZEB2;;chr3:185826855..185826911,-!p1@ETV5!0.52!82.94!ETV5;;chr6:7108569..7108683,+!p3@RREB1!0.52!11.30!RREB1;;chr19:4067039..4067064,-!p3@ZBTB7A!0.52!8.17!ZBTB7A;;chr6:7108855..7108903,+!p5@RREB1!0.52!6.09!RREB1;;chr15:100106670..100106697,+!p4@MEF2A!0.52!4.31!MEF2A;;chr1:41157641..41157665,+!p7@NFYC!0.52!3.12!NFYC;;chr15:90544532..90544563,+!p1@ZNF710!0.51!5.20!ZNF710;;chr2:231090471..231090504,+!p2@SP140!0.51!2.23!SP140;;chr19:49140572..49140594,-!p2@DBP!0.50!3.86!DBP;;chr17:40440225..40440268,+!p3@STAT5A!0.50!2.97!STAT5A;;chrX:129244454..129244488,-!p1@ELF4!0.49!19.92!ELF4;;chr10:104155480..104155534,+!p2@NFKB2!0.49!17.69!NFKB2;;chr1:161736140..161736151,+!p3@ATF6!0.49!8.17!ATF6;;chr2:145275211..145275220,-!p14@ZEB2!0.49!2.68!ZEB2;;chr2:145275982..145276003,-!p7@ZEB2!0.49!2.08!ZEB2;;chr2:185463521..185463557,+!p3@ZNF804A!0.49!2.08!ZNF804A;;chr3:187455680..187455700,-!p4@BCL6!0.49!2.08!BCL6;;chr8:102216925..102216938,-!p7@ZNF706!0.49!2.08!ZNF706;;chr19:13213399..13213414,-!p6@LYL1!0.49!2.08!LYL1;;chr8:116681194..116681214,-!p1@TRPS1!0.48!25.42!TRPS1;;chr7:99156393..99156433,+!p6@ZNF655!0.48!5.50!ZNF655;;chrX:48900782..48900793,-!p3@TFE3!0.48!4.46!TFE3;;chr5:88179195..88179224,-!p3@MEF2C!0.48!3.72!MEF2C;;chr8:72756637..72756664,-!p3@MSC!0.48!2.38!MSC;;chr3:129158768..129158819,-!p1@MBD4!0.47!40.87!MBD4;;chr4:106068026..106068084,+!p1@TET2!0.47!23.63!TET2;;chr13:27998854..27998866,+!p3@GTF3A!0.47!4.76!GTF3A;;chr5:142782823..142782854,-!p3@NR3C1!0.47!3.12!NR3C1;;chr1:38325227..38325246,-!p2@MTF1!0.47!2.97!MTF1;;chr10:104155659..104155676,+!p4@NFKB2!0.47!2.68!NFKB2;;chr10:31288329..31288353,-!p7@ZNF438!0.47!1.93!ZNF438;;chr2:169312350..169312362,+!p4@CERS6!0.47!1.93!CERS6;;chr2:185463158..185463181,+!p2@ZNF804A!0.47!1.93!ZNF804A;;chr15:90545434..90545449,+!p9@ZNF710!0.47!1.93!ZNF710;;chr16:79634581..79634592,-!p4@MAF!0.47!1.93!MAF;;chr1:156470515..156470542,-!p2@MEF2D!0.46!13.08!MEF2D;;chr6:41703296..41703367,-!p1@TFEB!0.46!12.78!TFEB;;chr2:61108650..61108687,+!p2@REL!0.46!12.19!REL;;chr5:88179017..88179046,-!p2@MEF2C!0.46!9.81!MEF2C;;chr14:89883412..89883478,-!p3@FOXN3!0.46!7.73!FOXN3;;chr17:61920116..61920131,-!p5@SMARCD2!0.46!4.46!SMARCD2;;chr20:48807648..48807671,+!p9@CEBPB!0.46!3.12!CEBPB;;chr18:77160282..77160343,+!p2@NFATC1!0.45!15.31!NFATC1;;chr17:41277372..4127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| ||
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000222;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000234;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000235;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000576;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000738;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000763;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000766;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000988;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002193;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002390;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002405 | |||
|ffid_belonging_in_development=CL:0000049,CL:0000134 | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
Line 37: | Line 44: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Macrophage%2520-%2520monocyte%2520derived%252c%2520donor3.CNhs12003.11389-118C3.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Macrophage%2520-%2520monocyte%2520derived%252c%2520donor3.CNhs12003.11389-118C3.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Macrophage%2520-%2520monocyte%2520derived%252c%2520donor3.CNhs12003.11389-118C3.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Macrophage%2520-%2520monocyte%2520derived%252c%2520donor3.CNhs12003.11389-118C3.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Macrophage%2520-%2520monocyte%2520derived%252c%2520donor3.CNhs12003.11389-118C3.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11389-118C3 | |id=FF:11389-118C3 | ||
|is_a=EFO:0002091;;FF:0000086 | |is_a=EFO:0002091;;FF:0000086 | ||
|is_obsolete= | |is_obsolete= | ||
|library_id=CNhs12003 | |||
|library_id_phase_based=2:CNhs12003 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11389 | |||
|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10006.GTTTCG.11389 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11389 | |||
|microRNAs_novel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer_novel/#/human#srna;sample;SRhi10006.GTTTCG.11389 | |||
|name=Macrophage - monocyte derived, donor3 | |name=Macrophage - monocyte derived, donor3 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
Line 45: | Line 65: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs12003,LSID837,release011,COMPLETED | |profile_hcage=CNhs12003,LSID837,release011,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=SRhi10006,,, | |profile_srnaseq=SRhi10006,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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| |||
|rna_box=118 | |rna_box=118 | ||
|rna_catalog_number=3H100-80-10 | |rna_catalog_number=3H100-80-10 | ||
Line 59: | Line 82: | ||
|rna_tube_id=118C3 | |rna_tube_id=118C3 | ||
|rna_weight_ug=10 | |rna_weight_ug=10 | ||
|rnaseq_library_id=SRhi10006.GTTTCG | |||
|sample_age=57 | |sample_age=57 | ||
|sample_category=primary cells | |||
|sample_cell_catalog=N/A | |sample_cell_catalog=N/A | ||
|sample_cell_line= | |sample_cell_line= | ||
Line 81: | Line 106: | ||
|top_motifs=SREBF1,2:2.32896586372;TLX2:2.24975398492;EN1,2:1.62732266683;FOXP3:1.44000490437;MTF1:1.34355132117;SPI1:1.19766222683;RXR{A,B,G}_{NR1H2,PPAR}dimers:1.19107443868;SPIB:1.08270896144;NANOG{mouse}:0.957096493079;TFCP2:0.934541458675;ESRRA:0.930897951517;ESR1:0.89204775161;ELF1,2,4:0.877869873672;TFAP4:0.854038675864;ETS1,2:0.831048446804;NFE2L2:0.810240309268;PPARG:0.78055113654;IRF1,2:0.779246205385;NFIL3:0.776147640967;IRF7:0.753206573213;MYOD1:0.728833219847;RXRA_VDR{dimer}:0.725278438477;DMAP1_NCOR{1,2}_SMARC:0.666675590083;IKZF2:0.663020551629;GLI1..3:0.616323788597;NR6A1:0.593891466047;PAX8:0.56718725746;HLF:0.548331619794;EBF1:0.495332230792;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.488582888671;AR:0.45816968256;SPZ1:0.444447743594;PAX2:0.405902966855;HNF4A_NR2F1,2:0.397657993885;EP300:0.375988160098;NKX3-2:0.35362230892;FOXD3:0.347255077039;HES1:0.331231773729;HMX1:0.284574395277;NKX2-2,8:0.274753058889;XCPE1{core}:0.255329056865;RUNX1..3:0.254591961767;STAT2,4,6:0.23795769523;VSX1,2:0.232111836225;FOSL2:0.216458905201;ZBTB16:0.210486315658;OCT4_SOX2{dimer}:0.209050908788;PAX6:0.185736668283;PRDM1:0.139724444548;PAX5:0.132992672019;TGIF1:0.0955175544574;TAL1_TCF{3,4,12}:0.0856257642476;TBP:0.0812688537738;NR1H4:0.077297040487;MYB:0.058923223821;SP1:0.0580124287011;POU1F1:0.0259835802251;POU5F1:0.0231859810053;NFY{A,B,C}:0.00746710071004;ARID5B:-0.0023146101077;E2F1..5:-0.00728032973677;NFE2:-0.0187057450076;KLF4:-0.0271381381949;GZF1:-0.0486595894582;ZNF143:-0.0707976136834;NFKB1_REL_RELA:-0.0719027457969;FOX{F1,F2,J1}:-0.101419574118;MYFfamily:-0.114787243965;RFX2..5_RFXANK_RFXAP:-0.120267436637;NKX2-3_NKX2-5:-0.125125693584;CEBPA,B_DDIT3:-0.127659437975;TOPORS:-0.137290588423;FOXO1,3,4:-0.140188620708;STAT1,3:-0.168197820135;GATA4:-0.173089137016;ZFP161:-0.179781828989;NRF1:-0.191255446378;FOXN1:-0.196684254764;PRRX1,2:-0.200971433461;NHLH1,2:-0.211002323666;YY1:-0.211066661798;BACH2:-0.223837236982;HBP1_HMGB_SSRP1_UBTF:-0.255112991635;SMAD1..7,9:-0.256788642539;GATA6:-0.258329981246;FOS_FOS{B,L1}_JUN{B,D}:-0.261519788072;PAX1,9:-0.263042366467;FOXP1:-0.271972122522;EGR1..3:-0.279160526195;ATF4:-0.286649392907;REST:-0.299349619405;ELK1,4_GABP{A,B1}:-0.305430806249;ALX4:-0.308911336252;NFE2L1:-0.327239617874;STAT5{A,B}:-0.327301242062;ZNF148:-0.33178606382;POU3F1..4:-0.357791252728;TFDP1:-0.383027185616;CDX1,2,4:-0.385503081593;PAX3,7:-0.399641542927;CREB1:-0.399985524232;UFEwm:-0.40550418204;HAND1,2:-0.414100468902;FOXA2:-0.416665507374;HIC1:-0.436570460933;HNF1A:-0.439648986418;NR5A1,2:-0.45930589454;NFIX:-0.475547523372;ZEB1:-0.481256214249;CRX:-0.484197303621;HSF1,2:-0.504998933324;NKX6-1,2:-0.509878532802;TFAP2{A,C}:-0.519380865405;SOX{8,9,10}:-0.525412913703;IKZF1:-0.527370730926;LMO2:-0.536432233342;LHX3,4:-0.557947902879;bHLH_family:-0.573845821488;CUX2:-0.580260272979;NR3C1:-0.58262785485;ATF5_CREB3:-0.583255804318;ALX1:-0.598253919436;PDX1:-0.607503877599;TFAP2B:-0.608054307497;ZNF423:-0.629761377599;PITX1..3:-0.634308522971;MAFB:-0.641910823115;HMGA1,2:-0.642827863105;ATF2:-0.666538388148;ZBTB6:-0.673240983056;RXR{A,B,G}:-0.674037147586;HIF1A:-0.68388541708;RORA:-0.694636402707;GFI1:-0.69866523462;HOX{A5,B5}:-0.712626791125;ONECUT1,2:-0.712648074261;TEF:-0.713450846256;RREB1:-0.732194376309;GTF2I:-0.744102580637;MAZ:-0.749411161241;MEF2{A,B,C,D}:-0.751306654592;TLX1..3_NFIC{dimer}:-0.752414825402;PAX4:-0.770729945613;FOX{D1,D2}:-0.773976951102;GFI1B:-0.774501532538;JUN:-0.811568898822;SNAI1..3:-0.822024000682;MYBL2:-0.840646771801;SRF:-0.842542607999;MTE{core}:-0.846152646773;GCM1,2:-0.854784653524;HOX{A6,A7,B6,B7}:-0.864916528124;GTF2A1,2:-0.876681570719;ADNP_IRX_SIX_ZHX:-0.877037778688;NANOG:-0.912214539538;T:-0.942707277536;ZNF238:-0.95254476181;NFATC1..3:-0.960887920453;BREu{core}:-0.964559406402;POU6F1:-1.01783915969;PATZ1:-1.02013930375;MED-1{core}:-1.03622206462;TP53:-1.03961911913;SOX2:-1.0462857249;POU2F1..3:-1.05400518657;TEAD1:-1.05481290707;ATF6:-1.08695736647;MZF1:-1.10294922165;SOX17:-1.10511314641;HOXA9_MEIS1:-1.11305368801;HOX{A4,D4}:-1.12128464694;DBP:-1.13083289517;NKX3-1:-1.13833841832;XBP1:-1.14056745484;ZIC1..3:-1.14183811248;FOX{I1,J2}:-1.1672214664;TBX4,5:-1.25926721528;RFX1:-1.31541120004;CDC5L:-1.33081197807;FOXQ1:-1.33811558424;SOX5:-1.36719937784;BPTF:-1.37545800601;EVI1:-1.44586229744;AHR_ARNT_ARNT2:-1.4620458321;AIRE:-1.51771685777;FOXM1:-1.56410471173;PBX1:-1.65129026153;LEF1_TCF7_TCF7L1,2:-1.74431749823;ZNF384:-1.91891566852;RBPJ:-1.96324874322;FOXL1:-2.14609333576;NKX2-1,4:-2.68811297328 | |top_motifs=SREBF1,2:2.32896586372;TLX2:2.24975398492;EN1,2:1.62732266683;FOXP3:1.44000490437;MTF1:1.34355132117;SPI1:1.19766222683;RXR{A,B,G}_{NR1H2,PPAR}dimers:1.19107443868;SPIB:1.08270896144;NANOG{mouse}:0.957096493079;TFCP2:0.934541458675;ESRRA:0.930897951517;ESR1:0.89204775161;ELF1,2,4:0.877869873672;TFAP4:0.854038675864;ETS1,2:0.831048446804;NFE2L2:0.810240309268;PPARG:0.78055113654;IRF1,2:0.779246205385;NFIL3:0.776147640967;IRF7:0.753206573213;MYOD1:0.728833219847;RXRA_VDR{dimer}:0.725278438477;DMAP1_NCOR{1,2}_SMARC:0.666675590083;IKZF2:0.663020551629;GLI1..3:0.616323788597;NR6A1:0.593891466047;PAX8:0.56718725746;HLF:0.548331619794;EBF1:0.495332230792;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.488582888671;AR:0.45816968256;SPZ1:0.444447743594;PAX2:0.405902966855;HNF4A_NR2F1,2:0.397657993885;EP300:0.375988160098;NKX3-2:0.35362230892;FOXD3:0.347255077039;HES1:0.331231773729;HMX1:0.284574395277;NKX2-2,8:0.274753058889;XCPE1{core}:0.255329056865;RUNX1..3:0.254591961767;STAT2,4,6:0.23795769523;VSX1,2:0.232111836225;FOSL2:0.216458905201;ZBTB16:0.210486315658;OCT4_SOX2{dimer}:0.209050908788;PAX6:0.185736668283;PRDM1:0.139724444548;PAX5:0.132992672019;TGIF1:0.0955175544574;TAL1_TCF{3,4,12}:0.0856257642476;TBP:0.0812688537738;NR1H4:0.077297040487;MYB:0.058923223821;SP1:0.0580124287011;POU1F1:0.0259835802251;POU5F1:0.0231859810053;NFY{A,B,C}:0.00746710071004;ARID5B:-0.0023146101077;E2F1..5:-0.00728032973677;NFE2:-0.0187057450076;KLF4:-0.0271381381949;GZF1:-0.0486595894582;ZNF143:-0.0707976136834;NFKB1_REL_RELA:-0.0719027457969;FOX{F1,F2,J1}:-0.101419574118;MYFfamily:-0.114787243965;RFX2..5_RFXANK_RFXAP:-0.120267436637;NKX2-3_NKX2-5:-0.125125693584;CEBPA,B_DDIT3:-0.127659437975;TOPORS:-0.137290588423;FOXO1,3,4:-0.140188620708;STAT1,3:-0.168197820135;GATA4:-0.173089137016;ZFP161:-0.179781828989;NRF1:-0.191255446378;FOXN1:-0.196684254764;PRRX1,2:-0.200971433461;NHLH1,2:-0.211002323666;YY1:-0.211066661798;BACH2:-0.223837236982;HBP1_HMGB_SSRP1_UBTF:-0.255112991635;SMAD1..7,9:-0.256788642539;GATA6:-0.258329981246;FOS_FOS{B,L1}_JUN{B,D}:-0.261519788072;PAX1,9:-0.263042366467;FOXP1:-0.271972122522;EGR1..3:-0.279160526195;ATF4:-0.286649392907;REST:-0.299349619405;ELK1,4_GABP{A,B1}:-0.305430806249;ALX4:-0.308911336252;NFE2L1:-0.327239617874;STAT5{A,B}:-0.327301242062;ZNF148:-0.33178606382;POU3F1..4:-0.357791252728;TFDP1:-0.383027185616;CDX1,2,4:-0.385503081593;PAX3,7:-0.399641542927;CREB1:-0.399985524232;UFEwm:-0.40550418204;HAND1,2:-0.414100468902;FOXA2:-0.416665507374;HIC1:-0.436570460933;HNF1A:-0.439648986418;NR5A1,2:-0.45930589454;NFIX:-0.475547523372;ZEB1:-0.481256214249;CRX:-0.484197303621;HSF1,2:-0.504998933324;NKX6-1,2:-0.509878532802;TFAP2{A,C}:-0.519380865405;SOX{8,9,10}:-0.525412913703;IKZF1:-0.527370730926;LMO2:-0.536432233342;LHX3,4:-0.557947902879;bHLH_family:-0.573845821488;CUX2:-0.580260272979;NR3C1:-0.58262785485;ATF5_CREB3:-0.583255804318;ALX1:-0.598253919436;PDX1:-0.607503877599;TFAP2B:-0.608054307497;ZNF423:-0.629761377599;PITX1..3:-0.634308522971;MAFB:-0.641910823115;HMGA1,2:-0.642827863105;ATF2:-0.666538388148;ZBTB6:-0.673240983056;RXR{A,B,G}:-0.674037147586;HIF1A:-0.68388541708;RORA:-0.694636402707;GFI1:-0.69866523462;HOX{A5,B5}:-0.712626791125;ONECUT1,2:-0.712648074261;TEF:-0.713450846256;RREB1:-0.732194376309;GTF2I:-0.744102580637;MAZ:-0.749411161241;MEF2{A,B,C,D}:-0.751306654592;TLX1..3_NFIC{dimer}:-0.752414825402;PAX4:-0.770729945613;FOX{D1,D2}:-0.773976951102;GFI1B:-0.774501532538;JUN:-0.811568898822;SNAI1..3:-0.822024000682;MYBL2:-0.840646771801;SRF:-0.842542607999;MTE{core}:-0.846152646773;GCM1,2:-0.854784653524;HOX{A6,A7,B6,B7}:-0.864916528124;GTF2A1,2:-0.876681570719;ADNP_IRX_SIX_ZHX:-0.877037778688;NANOG:-0.912214539538;T:-0.942707277536;ZNF238:-0.95254476181;NFATC1..3:-0.960887920453;BREu{core}:-0.964559406402;POU6F1:-1.01783915969;PATZ1:-1.02013930375;MED-1{core}:-1.03622206462;TP53:-1.03961911913;SOX2:-1.0462857249;POU2F1..3:-1.05400518657;TEAD1:-1.05481290707;ATF6:-1.08695736647;MZF1:-1.10294922165;SOX17:-1.10511314641;HOXA9_MEIS1:-1.11305368801;HOX{A4,D4}:-1.12128464694;DBP:-1.13083289517;NKX3-1:-1.13833841832;XBP1:-1.14056745484;ZIC1..3:-1.14183811248;FOX{I1,J2}:-1.1672214664;TBX4,5:-1.25926721528;RFX1:-1.31541120004;CDC5L:-1.33081197807;FOXQ1:-1.33811558424;SOX5:-1.36719937784;BPTF:-1.37545800601;EVI1:-1.44586229744;AHR_ARNT_ARNT2:-1.4620458321;AIRE:-1.51771685777;FOXM1:-1.56410471173;PBX1:-1.65129026153;LEF1_TCF7_TCF7L1,2:-1.74431749823;ZNF384:-1.91891566852;RBPJ:-1.96324874322;FOXL1:-2.14609333576;NKX2-1,4:-2.68811297328 | ||
|xref= | |xref= | ||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11389-118C3;search_select_hide=table117:FF:11389-118C3 | |||
}} | }} |
Latest revision as of 17:57, 4 June 2020
Name: | Macrophage - monocyte derived, donor3 |
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Species: | Human (Homo sapiens) |
Library ID: | CNhs12003 |
Sample type: | primary cells |
Genomic View: | UCSC |
RefEX: | Specific genes |
FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11 |
CAGEd-oPOSSUM: | link |
ZENBU report : | link |
Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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Download raw sequence, BAM & CTSS | ||||||||||||||
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RNA-Seq Accession numbers | ||||||||||||||||||||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12003
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12003
Novel motif | Logo | P-value |
---|---|---|
1 | 1 | 0.114 |
10 | 10 | 0.0414 |
100 | 100 | 0.865 |
101 | 101 | 0.28 |
102 | 102 | 0.25 |
103 | 103 | 0.16 |
104 | 104 | 0.491 |
105 | 105 | 0.808 |
106 | 106 | 0.0768 |
107 | 107 | 0.332 |
108 | 108 | 0.759 |
109 | 109 | 0.0057 |
11 | 11 | 0.0901 |
110 | 110 | 0.226 |
111 | 111 | 0.0302 |
112 | 112 | 0.111 |
113 | 113 | 0.416 |
114 | 114 | 0.0617 |
115 | 115 | 0.712 |
116 | 116 | 0.514 |
117 | 117 | 0.0415 |
118 | 118 | 0.245 |
119 | 119 | 0.188 |
12 | 12 | 0.5 |
120 | 120 | 0.538 |
121 | 121 | 0.594 |
122 | 122 | 0.553 |
123 | 123 | 0.72 |
124 | 124 | 0.631 |
125 | 125 | 0.0604 |
126 | 126 | 0.189 |
127 | 127 | 0.0863 |
128 | 128 | 0.093 |
129 | 129 | 0.541 |
13 | 13 | 0.0238 |
130 | 130 | 0.802 |
131 | 131 | 0.695 |
132 | 132 | 0.63 |
133 | 133 | 0.925 |
134 | 134 | 0.561 |
135 | 135 | 0.162 |
136 | 136 | 0.159 |
137 | 137 | 0.0169 |
138 | 138 | 0.288 |
139 | 139 | 0.144 |
14 | 14 | 0.387 |
140 | 140 | 0.401 |
141 | 141 | 0.516 |
142 | 142 | 0.373 |
143 | 143 | 0.469 |
144 | 144 | 0.376 |
145 | 145 | 0.681 |
146 | 146 | 0.977 |
147 | 147 | 0.135 |
148 | 148 | 0.0633 |
149 | 149 | 0.405 |
15 | 15 | 0.137 |
150 | 150 | 0.42 |
151 | 151 | 0.724 |
152 | 152 | 0.0227 |
153 | 153 | 0.217 |
154 | 154 | 0.979 |
155 | 155 | 0.142 |
156 | 156 | 0.421 |
157 | 157 | 0.785 |
158 | 158 | 0.995 |
159 | 159 | 0.367 |
16 | 16 | 0.127 |
160 | 160 | 0.542 |
161 | 161 | 0.666 |
162 | 162 | 0.781 |
163 | 163 | 0.679 |
164 | 164 | 0.137 |
165 | 165 | 0.386 |
166 | 166 | 0.599 |
167 | 167 | 0.565 |
168 | 168 | 0.7 |
169 | 169 | 0.00491 |
17 | 17 | 0.166 |
18 | 18 | 0.31 |
19 | 19 | 0.15 |
2 | 2 | 0.809 |
20 | 20 | 0.867 |
21 | 21 | 0.141 |
22 | 22 | 0.0991 |
23 | 23 | 0.368 |
24 | 24 | 0.0166 |
25 | 25 | 0.575 |
26 | 26 | 0.0159 |
27 | 27 | 0.121 |
28 | 28 | 0.557 |
29 | 29 | 0.127 |
3 | 3 | 0.0545 |
30 | 30 | 0.831 |
31 | 31 | 0.737 |
32 | 32 | 0.729 |
33 | 33 | 0.382 |
34 | 34 | 0.178 |
35 | 35 | 0.917 |
36 | 36 | 0.386 |
37 | 37 | 0.147 |
38 | 38 | 0.0744 |
39 | 39 | 0.973 |
4 | 4 | 0.689 |
40 | 40 | 0.117 |
41 | 41 | 0.172 |
42 | 42 | 0.772 |
43 | 43 | 0.107 |
44 | 44 | 0.0034 |
45 | 45 | 0.722 |
46 | 46 | 0.187 |
47 | 47 | 0.394 |
48 | 48 | 0.24 |
49 | 49 | 0.311 |
5 | 5 | 0.761 |
50 | 50 | 0.922 |
51 | 51 | 0.567 |
52 | 52 | 0.283 |
53 | 53 | 0.353 |
54 | 54 | 0.373 |
55 | 55 | 0.164 |
56 | 56 | 0.701 |
57 | 57 | 0.9 |
58 | 58 | 0.162 |
59 | 59 | 0.0751 |
6 | 6 | 0.105 |
60 | 60 | 0.119 |
61 | 61 | 0.217 |
62 | 62 | 0.0935 |
63 | 63 | 0.537 |
64 | 64 | 0.252 |
65 | 65 | 0.0562 |
66 | 66 | 0.946 |
67 | 67 | 0.292 |
68 | 68 | 0.993 |
69 | 69 | 0.466 |
7 | 7 | 0.275 |
70 | 70 | 0.086 |
71 | 71 | 0.0564 |
72 | 72 | 0.332 |
73 | 73 | 0.00288 |
74 | 74 | 0.706 |
75 | 75 | 0.0327 |
76 | 76 | 0.616 |
77 | 77 | 0.178 |
78 | 78 | 0.0669 |
79 | 79 | 0.199 |
8 | 8 | 0.12 |
80 | 80 | 0.378 |
81 | 81 | 0.258 |
82 | 82 | 0.394 |
83 | 83 | 0.95 |
84 | 84 | 0.476 |
85 | 85 | 0.0249 |
86 | 86 | 0.0951 |
87 | 87 | 0.00767 |
88 | 88 | 0.262 |
89 | 89 | 0.113 |
9 | 9 | 0.16 |
90 | 90 | 0.115 |
91 | 91 | 0.724 |
92 | 92 | 0.247 |
93 | 93 | 0.89 |
94 | 94 | 0.249 |
95 | 95 | 0.0272 |
96 | 96 | 0.247 |
97 | 97 | 0.955 |
98 | 98 | 0.501 |
99 | 99 | 0.886 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs12003
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000086 human macrophage sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0000763 (myeloid cell)
0002371 (somatic cell)
0000766 (myeloid leukocyte)
0000219 (motile cell)
0000325 (stuff accumulating cell)
0000473 (defensive cell)
0000234 (phagocyte)
0000738 (leukocyte)
0000255 (eukaryotic cell)
0000235 (macrophage)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000086 (human macrophage sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000049 (common myeloid progenitor)
CL:0000134 (mesenchymal cell)