FF:10079-102A7: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023 | |DRA_sample_Accession=CAGE@SAMD00005817 | ||
|accession_numbers=CAGE;DRX008672;DRR009544;DRZ000969;DRZ002354;DRZ012319;DRZ013704 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0007100,UBERON:0000948,UBERON:0002079,UBERON:0000479,UBERON:0000064,UBERON:0010314,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003103,UBERON:0002081,UBERON:0004151,UBERON:0010317,UBERON:0004535,UBERON:0001009 | |||
|ancestors_in_cell_lineage_facet= | |ancestors_in_cell_lineage_facet= | ||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000101,FF:0000001,FF:0000998,FF:0000004,FF:0010079 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score=chr5:172662197..172662216,-!p1@NKX2-5!2.39!243.71!NKX2-5;;chr15:42749722..42749739,-!p2@ZFP106!2.26!316.61!ZFP106;;chr20:62680984..62680999,-!p1@SOX18!2.05!145.80!SOX18;;chr4:174451370..174451387,-!p1@HAND2!1.96!90.77!HAND2;;chr7:35293685..35293718,-!p1@TBX20!1.95!87.19!TBX20;;chr8:11561684..11561751,+!p1@GATA4!1.90!78.62!GATA4;;chr1:214161272..214161322,+!p1@PROX1!1.75!76.47!PROX1;;chr1:27240455..27240474,-!p1@NR0B2!1.64!42.88!NR0B2;;chr2:19558373..19558392,-!p1@OSR1!1.59!100.77!OSR1;;chr17:53342311..53342400,+!p1@HLF!1.52!36.45!HLF;;chr21:39870339..39870443,-!p1@ERG!1.52!32.16!ERG;;chr8:25902876..25902936,-!p1@EBF2!1.51!31.45!EBF2;;chr8:10588010..10588030,-!p1@SOX7!1.48!29.30!SOX7;;chr4:174451350..174451363,-!p3@HAND2!1.48!29.30!HAND2;;chr11:46337652..46337682,+!p16@CREB3L1!1.47!28.59!CREB3L1;;chr17:26697276..26697303,-!p2@SEBOX,p2@VTN!1.47!28.59!SEBOX;;chr16:79634624..79634642,-!p1@MAF!1.46!105.06!MAF;;chr11:47400078..47400106,-!p1@SPI1!1.46!27.87!SPI1;;chr19:46801639..46801699,+!p1@HIF3A!1.46!27.87!HIF3A;;chr4:26165074..26165110,+!p9@RBPJ!1.46!27.87!RBPJ;;chr6:134210243..134210257,+!p1@TCF21!1.44!26.44!TCF21;;chr16:79634595..79634620,-!p2@MAF!1.42!45.03!MAF;;chr14:105935396..105935413,+!p4@MTA1!1.40!24.30!MTA1;;chr18:19749541..19749557,+!p1@GATA6!1.39!72.18!GATA6;;chr12:52437488..52437507,+!p2@NR4A1!1.39!23.58!NR4A1;;chr2:242556880..242556899,-!p5@THAP4!1.38!22.87!THAP4;;chr18:19749386..19749404,+!p2@GATA6!1.36!31.45!GATA6;;chr3:69788576..69788648,+!p1@MITF!1.33!105.77!MITF;;chr1:40105299..40105326,-!p1@HEYL!1.32!20.01!HEYL;;chr5:158526917..158526932,-!p1@EBF1!1.31!47.17!EBF1;;chr2:145277882..145277967,-!p3@ZEB2!1.31!33.59!ZEB2;;chr2:180427261..180427297,-!p6@ZNF385B!1.31!19.30!ZNF385B;;chr17:26697304..26697335,-!p1@SEBOX,p1@VTN!1.31!19.30!SEBOX;;chr17:38256822..38256851,-!p1@NR1D1!1.26!132.22!NR1D1;;chr18:53068911..53068935,-!p4@TCF4!1.26!19.30!TCF4;;chr1:170632285..170632309,+!p1@PRRX1!1.26!19.30!PRRX1;;chr8:55370487..55370503,+!p1@SOX17!1.26!17.15!SOX17;;chr2:68592406..68592424,+!p1@PLEK!1.26!17.15!PLEK;;chr8:106330656..106330684,+!p1@ZFPM2!1.25!43.60!ZFPM2;;chr17:1959369..1959388,+!p2@HIC1!1.25!43.60!HIC1;;chr4:174450089..174450153,-!p2@HAND2!1.24!16.44!HAND2;;chr15:96873984..96873999,+!p3@NR2F2!1.21!110.78!NR2F2;;chr5:88178983..88179012,-!p1@MEF2C!1.20!113.64!MEF2C;;chr7:15726296..15726315,-!p1@MEOX2!1.20!15.01!MEOX2;;chr20:30433396..30433414,-!p1@FOXS1!1.20!15.01!FOXS1;;chr7:44143925..44143970,+!p1@AEBP1!1.18!308.75!AEBP1;;chr5:172662230..172662241,-!p3@NKX2-5!1.18!14.29!NKX2-5;;chr16:85932760..85932775,+!p1@IRF8!1.18!14.29!IRF8;;chr1:61548225..61548299,+!p1@NFIA!1.15!171.53!NFIA;;chr18:19749517..19749531,+!p3@GATA6!1.15!23.58!GATA6;;chr17:41739283..41739297,-!p1@MEOX1!1.14!12.86!MEOX1;;chr7:15726243..15726293,-!p2@MEOX2!1.14!12.86!MEOX2;;chr17:38256799..38256815,-!p3@NR1D1!1.12!22.16!NR1D1;;chr20:50159198..50159299,-!p1@NFATC2!1.12!17.87!NFATC2;;chr7:44143997..44144008,+!p3@AEBP1!1.12!15.72!AEBP1;;chr5:172662303..172662320,-!p2@NKX2-5!1.12!12.15!NKX2-5;;chr8:93074803..93074845,-!p1@RUNX1T1!1.12!12.15!RUNX1T1;;chr20:39317868..39317884,-!p1@MAFB!1.11!142.22!MAFB;;chr11:113930425..113930471,+!p1@ZBTB16!1.11!17.15!ZBTB16;;chr5:124084493..124084524,-!p2@ZNF608!1.10!25.73!ZNF608;;chr5:158527104..158527135,-!p4@EBF1!1.09!11.44!EBF1;;chr5:71803177..71803255,-!p1@ZNF366!1.09!11.44!ZNF366;;chr10:131762504..131762555,-!p1@EBF3!1.09!11.44!EBF3;;chr3:25470156..25470227,+!p2@RARB!1.09!11.44!RARB;;chr1:170633058..170633084,+!p5@PRRX1!1.09!11.44!PRRX1;;chr1:61548374..61548415,+!p4@NFIA!1.07!20.01!NFIA;;chr7:44143978..44143989,+!p2@AEBP1!1.07!20.01!AEBP1;;chr2:192015701..192015743,-!p1@STAT4!1.07!15.01!STAT4;;chr2:180427304..180427323,-!p7@ZNF385B!1.07!10.72!ZNF385B;;chr4:149363494..149363543,-!p1@NR3C2!1.07!10.72!NR3C2;;chr19:46800289..46800327,+!p2@HIF3A!1.07!10.72!HIF3A;;chrY:21906594..21906622,-!p1@KDM5D!1.07!10.72!KDM5D;;chr20:50179368..50179392,-!p2@NFATC2!1.06!13.58!NFATC2;;chr8:106330696..106330719,+!p2@ZFPM2!1.06!13.58!ZFPM2;;chr13:72441315..72441454,-!p1@DACH1!1.05!20.73!DACH1;;chr15:42743341..42743377,-!p3@ZFP106!1.05!17.15!ZFP106;;chr7:128577972..128578047,+!p1@IRF5!1.05!16.44!IRF5;;chr19:33793430..33793447,-!p1@CEBPA!1.04!42.17!CEBPA;;chr1:61548069..61548102,+!p3@NFIA!1.04!24.30!NFIA;;chr20:61051039..61051057,-!p1@GATA5!1.04!10.01!GATA5;;chr11:47400062..47400077,-!p2@SPI1!1.04!10.01!SPI1;;chr9:124991204..124991246,-!p1@LHX6!1.04!10.01!LHX6;;chr1:170633262..170633285,+!p3@PRRX1!1.01!10.72!PRRX1;;chr12:114845810..114845824,-!p1@TBX5!1.01!9.29!TBX5;;chr1:23696308..23696339,-!p2@ZNF436!1.00!19.30!ZNF436;;chr3:12329358..12329393,+!p3@PPARG!0.99!22.16!PPARG;;chr14:73360799..73360817,-!p1@DPF3!0.98!30.73!DPF3;;chr1:151804244..151804310,-!p1@RORC!0.98!8.58!RORC;;chr1:214161358..214161377,+!p3@PROX1!0.98!8.58!PROX1;;chr20:590944..590960,-!p1@TCF15!0.98!8.58!TCF15;;chr2:242556900..242556916,-!p6@THAP4!0.98!8.58!THAP4;;chr18:19749504..19749515,+!p5@GATA6!0.98!8.58!GATA6;;chr10:51572408..51572454,+!p3@NCOA4!0.96!49.31!NCOA4;;chr1:221053049..221053075,+!p3@HLX!0.96!14.29!HLX;;chr1:170632477..170632506,+!p6@PRRX1!0.95!7.86!PRRX1;;chr16:79634464..79634493,-!p5@MAF!0.95!7.86!MAF;;chr17:6926362..6926377,+!p1@BCL6B!0.95!7.86!BCL6B;;chr8:93074848..93074871,-!p3@RUNX1T1!0.95!7.86!RUNX1T1;;chr22:38380543..38380569,-!p1@SOX10!0.95!7.86!SOX10;;chr3:21792682..21792720,-!p1@ZNF385D!0.95!7.86!ZNF385D;;chr2:145277640..145277771,-!p1@ZEB2!0.94!107.20!ZEB2;;chr9:14314131..14314147,-!p2@NFIB!0.94!44.31!NFIB;;chr3:25469724..25469773,+!p1@RARB!0.94!11.44!RARB;;chr12:26277956..26277980,-!p1@BHLHE41!0.93!27.87!BHLHE41;;chr3:126076264..126076305,-!p2@KLF15!0.93!10.72!KLF15;;chr4:149363475..149363492,-!p2@NR3C2!0.91!7.15!NR3C2;;chr4:26165146..26165163,+!p19@RBPJ!0.91!7.15!RBPJ;;chr18:19749353..19749367,+!p4@GATA6!0.91!7.15!GATA6;;chr13:72441074..72441172,-!p2@DACH1!0.91!7.15!DACH1;;chr5:158527139..158527161,-!p5@EBF1!0.91!7.15!EBF1;;chr7:73038839..73038862,-!p1@MLXIPL!0.91!7.15!MLXIPL;;chr3:18466787..18466839,-!p1@SATB1!0.90!32.16!SATB1;;chr12:96588368..96588394,+!p3@ELK3!0.90!19.30!ELK3;;chr17:7492684..7492778,-!p2@SOX15!0.90!15.01!SOX15;;chr2:145282041..145282092,-!p8@ZEB2!0.90!10.72!ZEB2;;chr20:51588873..51588953,+!p1@TSHZ2!0.90!9.29!TSHZ2;;chr3:21792585..21792625,-!p2@ZNF385D!0.90!7.86!ZNF385D;;chr18:6414884..6414942,-!p1@L3MBTL4!0.89!8.58!L3MBTL4;;chr15:42749346..42749359,-!p7@ZFP106!0.89!7.86!ZFP106;;chr12:24715376..24715432,-!p1@SOX5!0.88!8.58!SOX5;;chr19:45908292..45908374,-!p1@PPP1R13L!0.87!60.75!PPP1R13L;;chr12:26277929..26277955,-!p3@BHLHE41!0.87!9.29!BHLHE41;;chr1:61869835..61869848,+!p8@NFIA!0.87!8.58!NFIA;;chr1:170632959..170632987,+!p4@PRRX1!0.87!7.15!PRRX1;;chr1:214161328..214161348,+!p2@PROX1!0.87!6.43!PROX1;;chr11:47399996..47400014,-!p4@SPI1!0.87!6.43!SPI1;;chrY:2803415..2803468,+!p1@ZFY!0.87!6.43!ZFY;;chrY:21906761..21906810,-!p2@KDM5D!0.87!6.43!KDM5D;;chr16:67198633..67198671,+!p1@HSF4!0.87!6.43!HSF4;;chr17:46126136..46126152,+!p1@NFE2L1!0.86!341.62!NFE2L1;;chr6:19837592..19837621,+!p1@ID4!0.86!40.02!ID4;;chr3:71179746..71179783,-!p7@FOXP1!0.86!22.16!FOXP1;;chr3:126076242..126076257,-!p1@KLF15!0.86!7.86!KLF15;;chr9:77112244..77112262,+!p1@RORB!0.86!7.15!RORB;;chr9:102584262..102584276,+!p1@NR4A3!0.85!14.29!NR4A3;;chr5:88179195..88179224,-!p3@MEF2C!0.85!10.01!MEF2C;;chr3:12330560..12330579,+!p1@PPARG!0.85!7.15!PPARG;;chr1:61924375..61924380,+!p6@NFIA!0.84!8.58!NFIA;;chr2:46524537..46524553,+!p1@EPAS1!0.83!605.35!EPAS1;;chr2:192015750..192015793,-!p2@STAT4!0.83!7.86!STAT4;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!0.83!5.72!PEG3;;chr1:216896752..216896778,-!p1@ESRRG!0.83!5.72!ESRRG;;chr7:35293665..35293680,-!p2@TBX20!0.83!5.72!TBX20;;chr7:63505799..63505904,+!p1@ZNF727!0.83!5.72!ZNF727;;chr15:96874012..96874042,+!p2@NR2F2!0.82!54.32!NR2F2;;chr7:14029283..14029311,-!p1@ETV1!0.82!32.16!ETV1;;chr18:72922811..72922827,+!p1@TSHZ1!0.82!30.02!TSHZ1;;chr7:149470641..149470694,-!p1@ZNF467!0.82!27.16!ZNF467;;chr1:61547894..61547968,+!p2@NFIA!0.82!17.15!NFIA;;chr19:13134772..13134822,+!p2@NFIX!0.82!8.58!NFIX;;chr1:209979467..209979494,-!p1@IRF6!0.82!6.43!IRF6;;chr14:21994449..21994524,-!p2@SALL2!0.81!17.15!SALL2;;chr6:126070769..126070801,+!p1@HEY2!0.81!6.43!HEY2;;chr18:22932080..22932170,-!p1@ZNF521!0.80!24.30!ZNF521;;chr5:88179017..88179046,-!p2@MEF2C!0.80!22.87!MEF2C;;chr2:113057415..113057477,+!p3@ZC3H6!0.80!7.15!ZC3H6;;chr19:35759824..35759891,+!p1@USF2!0.79!173.67!USF2;;chr14:21566731..21566836,-!p1@ZNF219!0.79!60.75!ZNF219;;chr18:53257001..53257015,-!p5@TCF4!0.79!9.29!TCF4;;chr4:87856191..87856208,+!p2@AFF1!0.78!43.60!AFF1;;chr1:170633348..170633399,+!p2@PRRX1!0.78!7.15!PRRX1;;chr7:44143738..44143760,+!p4@AEBP1!0.78!5.72!AEBP1;;chr7:115670804..115670825,-!p1@TFEC!0.78!5.00!TFEC;;chr8:93115274..93115323,-!p4@RUNX1T1!0.78!5.00!RUNX1T1;;chr1:10856639..10856662,-!p2@CASZ1!0.78!5.00!CASZ1;;chr1:214161854..214161892,+!p4@PROX1!0.78!5.00!PROX1;;chr1:221053444..221053473,+!p8@HLX!0.78!5.00!HLX;;chr2:5832508..5832524,+!p1@SOX11!0.78!5.00!SOX11;;chr3:128212033..128212051,-!p1@GATA2!0.78!5.00!GATA2;;chr3:69915385..69915438,+!p3@MITF!0.78!5.00!MITF;;chr4:111544254..111544270,-!p3@PITX2!0.78!5.00!PITX2;;chr19:22193731..22193751,-!p1@ZNF208!0.78!5.00!ZNF208;;chr12:114845834..114845848,-!p5@TBX5!0.78!5.00!TBX5;;chr15:96873921..96873946,+!p1@NR2F2!0.77!152.23!NR2F2;;chr3:114866084..114866118,-!p2@ZBTB20!0.77!19.30!ZBTB20;;chr9:132427972..132428056,+!p1@PRRX2!0.76!6.43!PRRX2;;chr3:169381420..169381535,-!p1@MECOM!0.76!5.72!MECOM;;chr11:64073022..64073056,+!p1@ESRRA!0.75!60.75!ESRRA;;chr19:53636125..53636178,-!p1@ZNF415!0.75!14.29!ZNF415;;chr3:114819124..114819200,-!p3@ZBTB20!0.75!11.44!ZBTB20;;chr3:12329397..12329433,+!p2@PPARG!0.75!11.44!PPARG;;chr1:158969752..158969780,+!p6@IFI16!0.75!8.58!IFI16;;chr12:26277817..26277863,-!p2@BHLHE41!0.75!6.43!BHLHE41;;chr19:16435625..16435682,+!p1@KLF2!0.74!161.52!KLF2;;chr10:111985713..111985774,+!p2@MXI1!0.74!47.17!MXI1;;chr3:114343768..114343822,-!p1@ZBTB20!0.74!21.44!ZBT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F626;;chr17:7387524..7387597,-!p1@ZBTB4!0.33!17.87!ZBTB4;;chr1:149871135..149871169,+!p2@BOLA1!0.33!12.15!BOLA1;;chr9:32552577..32552627,-!p1@TOPORS!0.33!9.29!TOPORS;;chr5:137804484..137804498,+!p2@EGR1!0.33!7.15!EGR1;;chr21:40177892..40177903,+!p2@ETS2!0.33!7.15!ETS2;;chr5:76383017..76383068,-!p1@ZBED3!0.33!6.43!ZBED3;;chr1:27022839..27022890,+!p3@ARID1A!0.33!5.00!ARID1A;;chr2:148778973..148779035,+!p3@MBD5!0.33!4.29!MBD5;;chr19:38085633..38085706,-!p1@ZNF571!0.33!4.29!ZNF571;;chr2:145275109..145275128,-!p6@ZEB2!0.33!3.57!ZEB2;;chr19:22235279..22235301,+!p1@ZNF257!0.33!2.86!ZNF257;;chr3:150126022..150126034,+!p10@TSC22D2!0.33!2.14!TSC22D2;;chr19:44037334..44037365,+!p2@ZNF575!0.33!2.14!ZNF575;;chr1:221052700..221052730,+!p5@HLX!0.33!2.14!HLX;;chr15:83953397..83953425,-!p1@BNC1!0.33!1.43!BNC1;;chr17:46622205..46622218,-!p3@HOXB2!0.33!1.43!HOXB2;;chr17:46675420..46675465,-!p3@HOXB6!0.33!1.43!HOXB6;;chr18:56530595..56530606,+!p11@ZNF532!0.33!1.43!ZNF532;;chr19:20748557..20748568,-!p2@ZNF737!0.33!1.43!ZNF737;;chr19:20844356..20844365,-!p3@ZNF626!0.33!1.43!ZNF626;;chr10:31607702..31607755,+!p3@ZEB1!0.33!1.43!ZEB1;;chr7:108210048..108210169,-!p1@THAP5,p2@PNPLA8!0.32!57.18!THAP5;;chr12:122516646..122516668,+!p1@MLXIP!0.32!25.01!MLXIP;;chr22:30162924..30163005,-!p1@ZMAT5!0.32!22.87!ZMAT5;;chr4:10459009..10459061,-!p1@ZNF518B!0.32!16.44!ZNF518B;;chr19:57106647..57106686,+!p1@ZNF71!0.32!12.15!ZNF71;;chr9:95640300..95640345,-!p1@ZNF484!0.32!10.01!ZNF484;;chr19:12721760..12721778,+!p3@ZNF791!0.32!5.72!ZNF791;;chr19:44905759..44905797,-!p2@ZFP112,p2@ZNF285!0.32!3.57!ZNF285;;chr11:64073006..64073017,+!p3@ESRRA!0.32!3.57!ESRRA;;chr12:133707172..133707202,+!p2@ZNF10!0.32!3.57!ZNF10;;chr13:74708475..74708499,-!p5@KLF12!0.32!3.57!KLF12;;chr12:52430894..52430952,+!p3@NR4A1!0.32!2.86!NR4A1;;chr1:33721873..33721898,+!p3@ZNF362!0.32!2.86!ZNF362;;chr15:96874145..96874166,+!p7@NR2F2!0.32!2.86!NR2F2;;chr8:123793959..123793977,+!p4@ZHX2!0.32!2.86!ZHX2;;chr19:56111614..56111634,+!p3@ZNF524!0.32!2.14!ZNF524;;chr3:33482052..33482116,-!p2@UBP1!0.32!2.14!UBP1;;chr15:96874216..96874236,+!p13@NR2F2!0.32!2.14!NR2F2;;chr14:89878472..89878496,-!p7@FOXN3!0.32!1.43!FOXN3;;chr15:77197753..77197772,-!p2@SCAPER!0.32!1.43!SCAPER;;chr15:96869222..96869251,+!p18@NR2F2!0.32!1.43!NR2F2;;chr16:88752889..88752921,-!p1@SNAI3!0.32!1.43!SNAI3;;chr17:46622229..46622257,-!p6@HOXB2!0.32!1.43!HOXB2;;chr10:44144240..44144252,-!p4@ZNF32!0.32!1.43!ZNF32;;chr14:45722261..45722272,-!p5@MIS18BP1!0.32!1.43!MIS18BP1;;chr14:69259772..69259790,-!p1@ZFP36L1!0.31!187.96!ZFP36L1;;chr19:3366570..3366619,+!p1@NFIC!0.31!59.32!NFIC;;chr19:56152361..56152434,+!p1@ZNF580!0.31!49.31!ZNF580;;chr8:37553292..37553317,+!p1@ZNF703!0.31!43.60!ZNF703;;chr1:78149041..78149142,-!p1@ZZZ3!0.31!35.02!ZZZ3;;chr19:40562072..40562143,-!p1@ZNF780B!0.31!16.44!ZNF780B;;chr17:40897043..40897087,-!p1@EZH1!0.31!15.72!EZH1;;chr1:44679113..44679152,+!p1@DMAP1!0.31!14.29!DMAP1;;chr18:77867139..77867176,+!p1@ADNP2!0.31!13.58!ADNP2;;chr19:45504688..45504782,+!p1@RELB!0.31!10.72!RELB;;chr9:3525968..3526016,-!p1@RFX3!0.31!10.01!RFX3;;chr19:36909528..36909581,-!p1@ZFP82!0.31!7.86!ZFP82;;chr19:53466095..53466149,-!p1@ZNF321P,p1@ZNF816-ZNF321P,p1@ZNF816!0.31!7.15!ZNF816;;chr19:58095501..58095535,+!p1@ZIK1!0.31!5.72!ZIK1;;chr1:158979872..158979898,+!p3@IFI16!0.31!5.00!IFI16;;chr1:164528445..164528459,+!p2@PBX1!0.31!5.00!PBX1;;chr19:46272106..46272115,-!p3@SIX5!0.31!4.29!SIX5;;chr10:97890024..97890064,+!p2@ZNF518A!0.31!4.29!ZNF518A;;chr11:45168182..45168214,+!p1@ENST00000399269!0.31!4.29!PRDM11;;chr15:31618903..31618962,+!p3@KLF13!0.31!4.29!KLF13;; | |expression_enrichment_score=chr5:172662197..172662216,-!p1@NKX2-5!2.39!243.71!NKX2-5;;chr15:42749722..42749739,-!p2@ZFP106!2.26!316.61!ZFP106;;chr20:62680984..62680999,-!p1@SOX18!2.05!145.80!SOX18;;chr4:174451370..174451387,-!p1@HAND2!1.96!90.77!HAND2;;chr7:35293685..35293718,-!p1@TBX20!1.95!87.19!TBX20;;chr8:11561684..11561751,+!p1@GATA4!1.90!78.62!GATA4;;chr1:214161272..214161322,+!p1@PROX1!1.75!76.47!PROX1;;chr1:27240455..27240474,-!p1@NR0B2!1.64!42.88!NR0B2;;chr2:19558373..19558392,-!p1@OSR1!1.59!100.77!OSR1;;chr17:53342311..53342400,+!p1@HLF!1.52!36.45!HLF;;chr21:39870339..39870443,-!p1@ERG!1.52!32.16!ERG;;chr8:25902876..25902936,-!p1@EBF2!1.51!31.45!EBF2;;chr8:10588010..10588030,-!p1@SOX7!1.48!29.30!SOX7;;chr4:174451350..174451363,-!p3@HAND2!1.48!29.30!HAND2;;chr11:46337652..46337682,+!p16@CREB3L1!1.47!28.59!CREB3L1;;chr17:26697276..26697303,-!p2@SEBOX,p2@VTN!1.47!28.59!SEBOX;;chr16:79634624..79634642,-!p1@MAF!1.46!105.06!MAF;;chr11:47400078..47400106,-!p1@SPI1!1.46!27.87!SPI1;;chr19:46801639..46801699,+!p1@HIF3A!1.46!27.87!HIF3A;;chr4:26165074..26165110,+!p9@RBPJ!1.46!27.87!RBPJ;;chr6:134210243..134210257,+!p1@TCF21!1.44!26.44!TCF21;;chr16:79634595..79634620,-!p2@MAF!1.42!45.03!MAF;;chr14:105935396..105935413,+!p4@MTA1!1.40!24.30!MTA1;;chr18:19749541..19749557,+!p1@GATA6!1.39!72.18!GATA6;;chr12:52437488..52437507,+!p2@NR4A1!1.39!23.58!NR4A1;;chr2:242556880..242556899,-!p5@THAP4!1.38!22.87!THAP4;;chr18:19749386..19749404,+!p2@GATA6!1.36!31.45!GATA6;;chr3:69788576..69788648,+!p1@MITF!1.33!105.77!MITF;;chr1:40105299..40105326,-!p1@HEYL!1.32!20.01!HEYL;;chr5:158526917..158526932,-!p1@EBF1!1.31!47.17!EBF1;;chr2:145277882..145277967,-!p3@ZEB2!1.31!33.59!ZEB2;;chr2:180427261..180427297,-!p6@ZNF385B!1.31!19.30!ZNF385B;;chr17:26697304..26697335,-!p1@SEBOX,p1@VTN!1.31!19.30!SEBOX;;chr17:38256822..38256851,-!p1@NR1D1!1.26!132.22!NR1D1;;chr18:53068911..53068935,-!p4@TCF4!1.26!19.30!TCF4;;chr1:170632285..170632309,+!p1@PRRX1!1.26!19.30!PRRX1;;chr8:55370487..55370503,+!p1@SOX17!1.26!17.15!SOX17;;chr2:68592406..68592424,+!p1@PLEK!1.26!17.15!PLEK;;chr8:106330656..106330684,+!p1@ZFPM2!1.25!43.60!ZFPM2;;chr17:1959369..1959388,+!p2@HIC1!1.25!43.60!HIC1;;chr4:174450089..174450153,-!p2@HAND2!1.24!16.44!HAND2;;chr15:96873984..96873999,+!p3@NR2F2!1.21!110.78!NR2F2;;chr5:88178983..88179012,-!p1@MEF2C!1.20!113.64!MEF2C;;chr7:15726296..15726315,-!p1@MEOX2!1.20!15.01!MEOX2;;chr20:30433396..30433414,-!p1@FOXS1!1.20!15.01!FOXS1;;chr7:44143925..44143970,+!p1@AEBP1!1.18!308.75!AEBP1;;chr5:172662230..172662241,-!p3@NKX2-5!1.18!14.29!NKX2-5;;chr16:85932760..85932775,+!p1@IRF8!1.18!14.29!IRF8;;chr1:61548225..61548299,+!p1@NFIA!1.15!171.53!NFIA;;chr18:19749517..19749531,+!p3@GATA6!1.15!23.58!GATA6;;chr17:41739283..41739297,-!p1@MEOX1!1.14!12.86!MEOX1;;chr7:15726243..15726293,-!p2@MEOX2!1.14!12.86!MEOX2;;chr17:38256799..38256815,-!p3@NR1D1!1.12!22.16!NR1D1;;chr20:50159198..50159299,-!p1@NFATC2!1.12!17.87!NFATC2;;chr7:44143997..44144008,+!p3@AEBP1!1.12!15.72!AEBP1;;chr5:172662303..172662320,-!p2@NKX2-5!1.12!12.15!NKX2-5;;chr8:93074803..93074845,-!p1@RUNX1T1!1.12!12.15!RUNX1T1;;chr20:39317868..39317884,-!p1@MAFB!1.11!142.22!MAFB;;chr11:113930425..113930471,+!p1@ZBTB16!1.11!17.15!ZBTB16;;chr5:124084493..124084524,-!p2@ZNF608!1.10!25.73!ZNF608;;chr5:158527104..158527135,-!p4@EBF1!1.09!11.44!EBF1;;chr5:71803177..71803255,-!p1@ZNF366!1.09!11.44!ZNF366;;chr10:131762504..131762555,-!p1@EBF3!1.09!11.44!EBF3;;chr3:25470156..25470227,+!p2@RARB!1.09!11.44!RARB;;chr1:170633058..170633084,+!p5@PRRX1!1.09!11.44!PRRX1;;chr1:61548374..61548415,+!p4@NFIA!1.07!20.01!NFIA;;chr7:44143978..44143989,+!p2@AEBP1!1.07!20.01!AEBP1;;chr2:192015701..192015743,-!p1@STAT4!1.07!15.01!STAT4;;chr2:180427304..180427323,-!p7@ZNF385B!1.07!10.72!ZNF385B;;chr4:149363494..149363543,-!p1@NR3C2!1.07!10.72!NR3C2;;chr19:46800289..46800327,+!p2@HIF3A!1.07!10.72!HIF3A;;chrY:21906594..21906622,-!p1@KDM5D!1.07!10.72!KDM5D;;chr20:50179368..50179392,-!p2@NFATC2!1.06!13.58!NFATC2;;chr8:106330696..106330719,+!p2@ZFPM2!1.06!13.58!ZFPM2;;chr13:72441315..72441454,-!p1@DACH1!1.05!20.73!DACH1;;chr15:42743341..42743377,-!p3@ZFP106!1.05!17.15!ZFP106;;chr7:128577972..128578047,+!p1@IRF5!1.05!16.44!IRF5;;chr19:33793430..33793447,-!p1@CEBPA!1.04!42.17!CEBPA;;chr1:61548069..61548102,+!p3@NFIA!1.04!24.30!NFIA;;chr20:61051039..61051057,-!p1@GATA5!1.04!10.01!GATA5;;chr11:47400062..47400077,-!p2@SPI1!1.04!10.01!SPI1;;chr9:124991204..124991246,-!p1@LHX6!1.04!10.01!LHX6;;chr1:170633262..170633285,+!p3@PRRX1!1.01!10.72!PRRX1;;chr12:114845810..114845824,-!p1@TBX5!1.01!9.29!TBX5;;chr1:23696308..23696339,-!p2@ZNF436!1.00!19.30!ZNF436;;chr3:12329358..12329393,+!p3@PPARG!0.99!22.16!PPARG;;chr14:73360799..73360817,-!p1@DPF3!0.98!30.73!DPF3;;chr1:151804244..151804310,-!p1@RORC!0.98!8.58!RORC;;chr1:214161358..214161377,+!p3@PROX1!0.98!8.58!PROX1;;chr20:590944..590960,-!p1@TCF15!0.98!8.58!TCF15;;chr2:242556900..242556916,-!p6@THAP4!0.98!8.58!THAP4;;chr18:19749504..19749515,+!p5@GATA6!0.98!8.58!GATA6;;chr10:51572408..51572454,+!p3@NCOA4!0.96!49.31!NCOA4;;chr1:221053049..221053075,+!p3@HLX!0.96!14.29!HLX;;chr1:170632477..170632506,+!p6@PRRX1!0.95!7.86!PRRX1;;chr16:79634464..79634493,-!p5@MAF!0.95!7.86!MAF;;chr17:6926362..6926377,+!p1@BCL6B!0.95!7.86!BCL6B;;chr8:93074848..93074871,-!p3@RUNX1T1!0.95!7.86!RUNX1T1;;chr22:38380543..38380569,-!p1@SOX10!0.95!7.86!SOX10;;chr3:21792682..21792720,-!p1@ZNF385D!0.95!7.86!ZNF385D;;chr2:145277640..145277771,-!p1@ZEB2!0.94!107.20!ZEB2;;chr9:14314131..14314147,-!p2@NFIB!0.94!44.31!NFIB;;chr3:25469724..25469773,+!p1@RARB!0.94!11.44!RARB;;chr12:26277956..26277980,-!p1@BHLHE41!0.93!27.87!BHLHE41;;chr3:126076264..126076305,-!p2@KLF15!0.93!10.72!KLF15;;chr4:149363475..149363492,-!p2@NR3C2!0.91!7.15!NR3C2;;chr4:26165146..26165163,+!p19@RBPJ!0.91!7.15!RBPJ;;chr18:19749353..19749367,+!p4@GATA6!0.91!7.15!GATA6;;chr13:72441074..72441172,-!p2@DACH1!0.91!7.15!DACH1;;chr5:158527139..158527161,-!p5@EBF1!0.91!7.15!EBF1;;chr7:73038839..73038862,-!p1@MLXIPL!0.91!7.15!MLXIPL;;chr3:18466787..18466839,-!p1@SATB1!0.90!32.16!SATB1;;chr12:96588368..96588394,+!p3@ELK3!0.90!19.30!ELK3;;chr17:7492684..7492778,-!p2@SOX15!0.90!15.01!SOX15;;chr2:145282041..145282092,-!p8@ZEB2!0.90!10.72!ZEB2;;chr20:51588873..51588953,+!p1@TSHZ2!0.90!9.29!TSHZ2;;chr3:21792585..21792625,-!p2@ZNF385D!0.90!7.86!ZNF385D;;chr18:6414884..6414942,-!p1@L3MBTL4!0.89!8.58!L3MBTL4;;chr15:42749346..42749359,-!p7@ZFP106!0.89!7.86!ZFP106;;chr12:24715376..24715432,-!p1@SOX5!0.88!8.58!SOX5;;chr19:45908292..45908374,-!p1@PPP1R13L!0.87!60.75!PPP1R13L;;chr12:26277929..26277955,-!p3@BHLHE41!0.87!9.29!BHLHE41;;chr1:61869835..61869848,+!p8@NFIA!0.87!8.58!NFIA;;chr1:170632959..170632987,+!p4@PRRX1!0.87!7.15!PRRX1;;chr1:214161328..214161348,+!p2@PROX1!0.87!6.43!PROX1;;chr11:47399996..47400014,-!p4@SPI1!0.87!6.43!SPI1;;chrY:2803415..2803468,+!p1@ZFY!0.87!6.43!ZFY;;chrY:21906761..21906810,-!p2@KDM5D!0.87!6.43!KDM5D;;chr16:67198633..67198671,+!p1@HSF4!0.87!6.43!HSF4;;chr17:46126136..46126152,+!p1@NFE2L1!0.86!341.62!NFE2L1;;chr6:19837592..19837621,+!p1@ID4!0.86!40.02!ID4;;chr3:71179746..71179783,-!p7@FOXP1!0.86!22.16!FOXP1;;chr3:126076242..126076257,-!p1@KLF15!0.86!7.86!KLF15;;chr9:77112244..77112262,+!p1@RORB!0.86!7.15!RORB;;chr9:102584262..102584276,+!p1@NR4A3!0.85!14.29!NR4A3;;chr5:88179195..88179224,-!p3@MEF2C!0.85!10.01!MEF2C;;chr3:12330560..12330579,+!p1@PPARG!0.85!7.15!PPARG;;chr1:61924375..61924380,+!p6@NFIA!0.84!8.58!NFIA;;chr2:46524537..46524553,+!p1@EPAS1!0.83!605.35!EPAS1;;chr2:192015750..192015793,-!p2@STAT4!0.83!7.86!STAT4;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!0.83!5.72!PEG3;;chr1:216896752..216896778,-!p1@ESRRG!0.83!5.72!ESRRG;;chr7:35293665..35293680,-!p2@TBX20!0.83!5.72!TBX20;;chr7:63505799..63505904,+!p1@ZNF727!0.83!5.72!ZNF727;;chr15:96874012..96874042,+!p2@NR2F2!0.82!54.32!NR2F2;;chr7:14029283..14029311,-!p1@ETV1!0.82!32.16!ETV1;;chr18:72922811..72922827,+!p1@TSHZ1!0.82!30.02!TSHZ1;;chr7:149470641..149470694,-!p1@ZNF467!0.82!27.16!ZNF467;;chr1:61547894..61547968,+!p2@NFIA!0.82!17.15!NFIA;;chr19:13134772..13134822,+!p2@NFIX!0.82!8.58!NFIX;;chr1:209979467..209979494,-!p1@IRF6!0.82!6.43!IRF6;;chr14:21994449..21994524,-!p2@SALL2!0.81!17.15!SALL2;;chr6:126070769..126070801,+!p1@HEY2!0.81!6.43!HEY2;;chr18:22932080..22932170,-!p1@ZNF521!0.80!24.30!ZNF521;;chr5:88179017..88179046,-!p2@MEF2C!0.80!22.87!MEF2C;;chr2:113057415..113057477,+!p3@ZC3H6!0.80!7.15!ZC3H6;;chr19:35759824..35759891,+!p1@USF2!0.79!173.67!USF2;;chr14:21566731..21566836,-!p1@ZNF219!0.79!60.75!ZNF219;;chr18:53257001..53257015,-!p5@TCF4!0.79!9.29!TCF4;;chr4:87856191..87856208,+!p2@AFF1!0.78!43.60!AFF1;;chr1:170633348..170633399,+!p2@PRRX1!0.78!7.15!PRRX1;;chr7:44143738..44143760,+!p4@AEBP1!0.78!5.72!AEBP1;;chr7:115670804..115670825,-!p1@TFEC!0.78!5.00!TFEC;;chr8:93115274..93115323,-!p4@RUNX1T1!0.78!5.00!RUNX1T1;;chr1:10856639..10856662,-!p2@CASZ1!0.78!5.00!CASZ1;;chr1:214161854..214161892,+!p4@PROX1!0.78!5.00!PROX1;;chr1:221053444..221053473,+!p8@HLX!0.78!5.00!HLX;;chr2:5832508..5832524,+!p1@SOX11!0.78!5.00!SOX11;;chr3:128212033..128212051,-!p1@GATA2!0.78!5.00!GATA2;;chr3:69915385..69915438,+!p3@MITF!0.78!5.00!MITF;;chr4:111544254..111544270,-!p3@PITX2!0.78!5.00!PITX2;;chr19:22193731..22193751,-!p1@ZNF208!0.78!5.00!ZNF208;;chr12:114845834..114845848,-!p5@TBX5!0.78!5.00!TBX5;;chr15:96873921..96873946,+!p1@NR2F2!0.77!152.23!NR2F2;;chr3:114866084..114866118,-!p2@ZBTB20!0.77!19.30!ZBTB20;;chr9:132427972..132428056,+!p1@PRRX2!0.76!6.43!PRRX2;;chr3:169381420..169381535,-!p1@MECOM!0.76!5.72!MECOM;;chr11:64073022..64073056,+!p1@ESRRA!0.75!60.75!ESRRA;;chr19:53636125..53636178,-!p1@ZNF415!0.75!14.29!ZNF415;;chr3:114819124..114819200,-!p3@ZBTB20!0.75!11.44!ZBTB20;;chr3:12329397..12329433,+!p2@PPARG!0.75!11.44!PPARG;;chr1:158969752..158969780,+!p6@IFI16!0.75!8.58!IFI16;;chr12:26277817..26277863,-!p2@BHLHE41!0.75!6.43!BHLHE41;;chr19:16435625..16435682,+!p1@KLF2!0.74!161.52!KLF2;;chr10:111985713..111985774,+!p2@MXI1!0.74!47.17!MXI1;;chr3:114343768..114343822,-!p1@ZBTB20!0.74!21.44!ZBT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F626;;chr17:7387524..7387597,-!p1@ZBTB4!0.33!17.87!ZBTB4;;chr1:149871135..149871169,+!p2@BOLA1!0.33!12.15!BOLA1;;chr9:32552577..32552627,-!p1@TOPORS!0.33!9.29!TOPORS;;chr5:137804484..137804498,+!p2@EGR1!0.33!7.15!EGR1;;chr21:40177892..40177903,+!p2@ETS2!0.33!7.15!ETS2;;chr5:76383017..76383068,-!p1@ZBED3!0.33!6.43!ZBED3;;chr1:27022839..27022890,+!p3@ARID1A!0.33!5.00!ARID1A;;chr2:148778973..148779035,+!p3@MBD5!0.33!4.29!MBD5;;chr19:38085633..38085706,-!p1@ZNF571!0.33!4.29!ZNF571;;chr2:145275109..145275128,-!p6@ZEB2!0.33!3.57!ZEB2;;chr19:22235279..22235301,+!p1@ZNF257!0.33!2.86!ZNF257;;chr3:150126022..150126034,+!p10@TSC22D2!0.33!2.14!TSC22D2;;chr19:44037334..44037365,+!p2@ZNF575!0.33!2.14!ZNF575;;chr1:221052700..221052730,+!p5@HLX!0.33!2.14!HLX;;chr15:83953397..83953425,-!p1@BNC1!0.33!1.43!BNC1;;chr17:46622205..46622218,-!p3@HOXB2!0.33!1.43!HOXB2;;chr17:46675420..46675465,-!p3@HOXB6!0.33!1.43!HOXB6;;chr18:56530595..56530606,+!p11@ZNF532!0.33!1.43!ZNF532;;chr19:20748557..20748568,-!p2@ZNF737!0.33!1.43!ZNF737;;chr19:20844356..20844365,-!p3@ZNF626!0.33!1.43!ZNF626;;chr10:31607702..31607755,+!p3@ZEB1!0.33!1.43!ZEB1;;chr7:108210048..108210169,-!p1@THAP5,p2@PNPLA8!0.32!57.18!THAP5;;chr12:122516646..122516668,+!p1@MLXIP!0.32!25.01!MLXIP;;chr22:30162924..30163005,-!p1@ZMAT5!0.32!22.87!ZMAT5;;chr4:10459009..10459061,-!p1@ZNF518B!0.32!16.44!ZNF518B;;chr19:57106647..57106686,+!p1@ZNF71!0.32!12.15!ZNF71;;chr9:95640300..95640345,-!p1@ZNF484!0.32!10.01!ZNF484;;chr19:12721760..12721778,+!p3@ZNF791!0.32!5.72!ZNF791;;chr19:44905759..44905797,-!p2@ZFP112,p2@ZNF285!0.32!3.57!ZNF285;;chr11:64073006..64073017,+!p3@ESRRA!0.32!3.57!ESRRA;;chr12:133707172..133707202,+!p2@ZNF10!0.32!3.57!ZNF10;;chr13:74708475..74708499,-!p5@KLF12!0.32!3.57!KLF12;;chr12:52430894..52430952,+!p3@NR4A1!0.32!2.86!NR4A1;;chr1:33721873..33721898,+!p3@ZNF362!0.32!2.86!ZNF362;;chr15:96874145..96874166,+!p7@NR2F2!0.32!2.86!NR2F2;;chr8:123793959..123793977,+!p4@ZHX2!0.32!2.86!ZHX2;;chr19:56111614..56111634,+!p3@ZNF524!0.32!2.14!ZNF524;;chr3:33482052..33482116,-!p2@UBP1!0.32!2.14!UBP1;;chr15:96874216..96874236,+!p13@NR2F2!0.32!2.14!NR2F2;;chr14:89878472..89878496,-!p7@FOXN3!0.32!1.43!FOXN3;;chr15:77197753..77197772,-!p2@SCAPER!0.32!1.43!SCAPER;;chr15:96869222..96869251,+!p18@NR2F2!0.32!1.43!NR2F2;;chr16:88752889..88752921,-!p1@SNAI3!0.32!1.43!SNAI3;;chr17:46622229..46622257,-!p6@HOXB2!0.32!1.43!HOXB2;;chr10:44144240..44144252,-!p4@ZNF32!0.32!1.43!ZNF32;;chr14:45722261..45722272,-!p5@MIS18BP1!0.32!1.43!MIS18BP1;;chr14:69259772..69259790,-!p1@ZFP36L1!0.31!187.96!ZFP36L1;;chr19:3366570..3366619,+!p1@NFIC!0.31!59.32!NFIC;;chr19:56152361..56152434,+!p1@ZNF580!0.31!49.31!ZNF580;;chr8:37553292..37553317,+!p1@ZNF703!0.31!43.60!ZNF703;;chr1:78149041..78149142,-!p1@ZZZ3!0.31!35.02!ZZZ3;;chr19:40562072..40562143,-!p1@ZNF780B!0.31!16.44!ZNF780B;;chr17:40897043..40897087,-!p1@EZH1!0.31!15.72!EZH1;;chr1:44679113..44679152,+!p1@DMAP1!0.31!14.29!DMAP1;;chr18:77867139..77867176,+!p1@ADNP2!0.31!13.58!ADNP2;;chr19:45504688..45504782,+!p1@RELB!0.31!10.72!RELB;;chr9:3525968..3526016,-!p1@RFX3!0.31!10.01!RFX3;;chr19:36909528..36909581,-!p1@ZFP82!0.31!7.86!ZFP82;;chr19:53466095..53466149,-!p1@ZNF321P,p1@ZNF816-ZNF321P,p1@ZNF816!0.31!7.15!ZNF816;;chr19:58095501..58095535,+!p1@ZIK1!0.31!5.72!ZIK1;;chr1:158979872..158979898,+!p3@IFI16!0.31!5.00!IFI16;;chr1:164528445..164528459,+!p2@PBX1!0.31!5.00!PBX1;;chr19:46272106..46272115,-!p3@SIX5!0.31!4.29!SIX5;;chr10:97890024..97890064,+!p2@ZNF518A!0.31!4.29!ZNF518A;;chr11:45168182..45168214,+!p1@ENST00000399269!0.31!4.29!PRDM11;;chr15:31618903..31618962,+!p3@KLF13!0.31!4.29!KLF13;; | ||
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000948;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002081;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0004151;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0007100 | |||
|ffid_belonging_in_development=UBERON:0002532,UBERON:0006603,UBERON:0010227,UBERON:0010316 | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
Line 35: | Line 42: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/left%2520atrium%252c%2520adult%252c%2520donor1.CNhs11790.10079-102A7.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/left%2520atrium%252c%2520adult%252c%2520donor1.CNhs11790.10079-102A7.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/left%2520atrium%252c%2520adult%252c%2520donor1.CNhs11790.10079-102A7.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/left%2520atrium%252c%2520adult%252c%2520donor1.CNhs11790.10079-102A7.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/left%2520atrium%252c%2520adult%252c%2520donor1.CNhs11790.10079-102A7.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:10079-102A7 | |id=FF:10079-102A7 | ||
|is_a=EFO:0002091;;FF:0010079 | |is_a=EFO:0002091;;FF:0010079 | ||
|is_obsolete= | |is_obsolete= | ||
|library_id=CNhs11790 | |||
|library_id_phase_based=2:CNhs11790 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10079 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10079 | |||
|name=left atrium, adult, donor1 | |name=left atrium, adult, donor1 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
Line 43: | Line 61: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs11790,LSID820,release009,COMPLETED | |profile_hcage=CNhs11790,LSID820,release009,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0,0,0,0.660246464403414,0,0.225179326089987,0,0.385413166197324,0.975790985646705,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232174345827946,0,0,0,0,0,0.680400845522411,0,0,0.935986951755004,0,0,0,0,0,0,0,0,0,0,0,0,0.132391748095693,0.385497356176373,0,0,0,0,0,0,0,-0.0242150211128343,0,0,0,0.234186964128339,0,0.173595131722566,0,0.681366380547863,0,0,0.136843336915242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148045974339127,0,0,0.0675674196169498,0.129515756449626,0.11709348206417,0,0.039448274740592,0.033807299895225,0.0986447574564875,0,0,0,0,-0.0980353512377064,0.6137313903772,0,0,0,0,0,0.11709348206417,0,0,0,0,0,0,0,0,0,0,0,0.0207198881417083,0.234186964128339,0,0,0.222168939309337,0.197123534939147,0,0,0.234186964128339,0,0,0 | |||
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| |||
|rna_box=102 | |rna_box=102 | ||
|rna_catalog_number=Cat:AM6854 | |rna_catalog_number=Cat:AM6854 | ||
Line 58: | Line 79: | ||
|rna_weight_ug=100 | |rna_weight_ug=100 | ||
|sample_age= | |sample_age= | ||
|sample_category=tissues | |||
|sample_cell_catalog=NA | |sample_cell_catalog=NA | ||
|sample_cell_line= | |sample_cell_line= | ||
Line 79: | Line 101: | ||
|top_motifs=MEF2{A,B,C,D}:5.43561568177;NR1H4:4.19959932578;NFE2L1:3.44200752478;ESRRA:3.27728408349;GCM1,2:3.22706886296;GATA4:3.02809173573;NR5A1,2:3.00276352713;SRF:2.47015038468;MYBL2:2.24478389256;PAX6:2.22640401206;TFAP2{A,C}:2.09833298786;TGIF1:2.05750010683;AR:1.96539819344;MAFB:1.88137510383;XBP1:1.84483368883;SPZ1:1.79176153004;NR6A1:1.75336501185;HOX{A4,D4}:1.74451440011;NFATC1..3:1.73569532182;POU3F1..4:1.73108791521;TFAP4:1.70785760239;IKZF2:1.70700146739;TLX1..3_NFIC{dimer}:1.60926935255;NKX2-2,8:1.54986555763;FOXL1:1.54553320479;RXR{A,B,G}:1.53588366854;GFI1B:1.53107447007;SMAD1..7,9:1.52182120616;HMX1:1.52111669978;KLF4:1.51420246502;HAND1,2:1.48392653722;UFEwm:1.45890412951;PDX1:1.44905109296;SOX5:1.40790923309;HIC1:1.39355036282;TFCP2:1.3899656369;NKX2-1,4:1.3836548208;TBP:1.37052465182;NR3C1:1.2922330953;TLX2:1.26789776131;MTF1:1.25960005985;PPARG:1.22620425898;RBPJ:1.22528759031;EVI1:1.19418258915;PRDM1:1.18666292805;PAX5:1.11269488569;CUX2:1.10615659376;ZIC1..3:1.0979164154;GATA6:1.0899085778;T:1.08373481704;TBX4,5:1.06406078378;ZNF423:1.0593798855;IRF7:1.00047962747;NKX3-2:0.992573288519;NHLH1,2:0.990326452835;HOX{A6,A7,B6,B7}:0.988272077754;RREB1:0.94650616615;MAZ:0.89269153089;TEAD1:0.891731869808;IKZF1:0.884657231743;FOXO1,3,4:0.849483529568;TFAP2B:0.828672818236;RORA:0.818621269631;EGR1..3:0.792177977333;MED-1{core}:0.776222593252;EP300:0.775638700213;PATZ1:0.767115086029;RXRA_VDR{dimer}:0.761919116286;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.760541138469;ZNF384:0.719652610132;HOX{A5,B5}:0.706002244681;SREBF1,2:0.691851952457;EN1,2:0.675840728399;REST:0.673008311756;SP1:0.653561409713;GTF2I:0.647151698544;MYFfamily:0.645715040075;ZFP161:0.590562536519;NKX6-1,2:0.582624198576;EBF1:0.58068224993;CDX1,2,4:0.567388972526;GTF2A1,2:0.565695073793;POU6F1:0.553253489478;FOXQ1:0.521059695789;FOX{D1,D2}:0.508037036545;NFIX:0.479437598256;ALX4:0.469030953694;HNF4A_NR2F1,2:0.463063534242;STAT2,4,6:0.416745121255;MZF1:0.415857435684;ESR1:0.39894004816;LMO2:0.370454336201;IRF1,2:0.3552956144;ZNF238:0.353012899079;BREu{core}:0.343033039465;MTE{core}:0.334811110834;CDC5L:0.320061647158;XCPE1{core}:0.301710218309;STAT1,3:0.240720820144;GLI1..3:0.224228448749;ATF6:0.217053491892;MYOD1:0.215115818616;ZBTB16:0.199724564217;ETS1,2:0.106125596651;BPTF:0.102341016484;GZF1:0.0990003881075;ZEB1:0.0793152822405;ATF2:0.0657385812844;ZBTB6:-0.0220205818962;TOPORS:-0.0364301946652;AIRE:-0.0415596469011;ALX1:-0.0477206489179;SOX17:-0.0595463875113;NANOG:-0.0827962333834;SOX{8,9,10}:-0.0844572658667;ZNF148:-0.099893103962;SPIB:-0.101670353504;PAX2:-0.119038077295;HSF1,2:-0.133560584756;SPI1:-0.155365453764;LHX3,4:-0.15919675528;FOX{F1,F2,J1}:-0.164322850489;FOXP3:-0.168082249165;SNAI1..3:-0.210696777162;FOSL2:-0.240625698678;LEF1_TCF7_TCF7L1,2:-0.282121754207;TP53:-0.299564647086;HNF1A:-0.339376588871;ATF4:-0.342214851812;GFI1:-0.355909838473;PAX1,9:-0.377002100119;HMGA1,2:-0.415881721201;FOXA2:-0.427435901384;JUN:-0.438315068005;ATF5_CREB3:-0.438416400784;YY1:-0.46065796744;DMAP1_NCOR{1,2}_SMARC:-0.472190787904;HOXA9_MEIS1:-0.498987896609;NANOG{mouse}:-0.521528199698;HLF:-0.528603396734;FOXN1:-0.545860875969;CEBPA,B_DDIT3:-0.549656215949;ELF1,2,4:-0.576989713617;NRF1:-0.611323189054;ARID5B:-0.625101228629;RFX2..5_RFXANK_RFXAP:-0.648772624032;ZNF143:-0.658839131385;RUNX1..3:-0.667766845661;NFKB1_REL_RELA:-0.681113432829;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.722717368889;PBX1:-0.757785044496;NKX3-1:-0.795261411269;POU1F1:-0.816197627322;POU5F1:-0.82879306118;FOXP1:-0.838737030095;STAT5{A,B}:-0.858443453321;FOXD3:-0.868308241524;TEF:-0.874072172437;NFE2:-0.912992891426;ONECUT1,2:-0.94369433934;NFIL3:-0.952438007565;TAL1_TCF{3,4,12}:-0.968409957869;SOX2:-1.00785553893;RFX1:-1.02052511399;NFY{A,B,C}:-1.02056837225;FOS_FOS{B,L1}_JUN{B,D}:-1.02184736125;VSX1,2:-1.02415115445;BACH2:-1.04908635792;NFE2L2:-1.06550156589;PAX3,7:-1.09394925886;E2F1..5:-1.12686241432;PAX8:-1.13767400399;CREB1:-1.16247405329;FOXM1:-1.2030298316;CRX:-1.21564069254;ADNP_IRX_SIX_ZHX:-1.22714289348;PITX1..3:-1.24782326313;TFDP1:-1.25599474064;HES1:-1.2769841454;OCT4_SOX2{dimer}:-1.33281717991;bHLH_family:-1.34726798879;NKX2-3_NKX2-5:-1.38770982539;AHR_ARNT_ARNT2:-1.40293863165;HIF1A:-1.5245373594;DBP:-1.60551097191;POU2F1..3:-1.63629335256;PRRX1,2:-1.67427981698;HBP1_HMGB_SSRP1_UBTF:-1.78040267279;MYB:-1.80833721091;FOX{I1,J2}:-1.86883325595;ELK1,4_GABP{A,B1}:-1.92479817847;PAX4:-2.00982757009 | |top_motifs=MEF2{A,B,C,D}:5.43561568177;NR1H4:4.19959932578;NFE2L1:3.44200752478;ESRRA:3.27728408349;GCM1,2:3.22706886296;GATA4:3.02809173573;NR5A1,2:3.00276352713;SRF:2.47015038468;MYBL2:2.24478389256;PAX6:2.22640401206;TFAP2{A,C}:2.09833298786;TGIF1:2.05750010683;AR:1.96539819344;MAFB:1.88137510383;XBP1:1.84483368883;SPZ1:1.79176153004;NR6A1:1.75336501185;HOX{A4,D4}:1.74451440011;NFATC1..3:1.73569532182;POU3F1..4:1.73108791521;TFAP4:1.70785760239;IKZF2:1.70700146739;TLX1..3_NFIC{dimer}:1.60926935255;NKX2-2,8:1.54986555763;FOXL1:1.54553320479;RXR{A,B,G}:1.53588366854;GFI1B:1.53107447007;SMAD1..7,9:1.52182120616;HMX1:1.52111669978;KLF4:1.51420246502;HAND1,2:1.48392653722;UFEwm:1.45890412951;PDX1:1.44905109296;SOX5:1.40790923309;HIC1:1.39355036282;TFCP2:1.3899656369;NKX2-1,4:1.3836548208;TBP:1.37052465182;NR3C1:1.2922330953;TLX2:1.26789776131;MTF1:1.25960005985;PPARG:1.22620425898;RBPJ:1.22528759031;EVI1:1.19418258915;PRDM1:1.18666292805;PAX5:1.11269488569;CUX2:1.10615659376;ZIC1..3:1.0979164154;GATA6:1.0899085778;T:1.08373481704;TBX4,5:1.06406078378;ZNF423:1.0593798855;IRF7:1.00047962747;NKX3-2:0.992573288519;NHLH1,2:0.990326452835;HOX{A6,A7,B6,B7}:0.988272077754;RREB1:0.94650616615;MAZ:0.89269153089;TEAD1:0.891731869808;IKZF1:0.884657231743;FOXO1,3,4:0.849483529568;TFAP2B:0.828672818236;RORA:0.818621269631;EGR1..3:0.792177977333;MED-1{core}:0.776222593252;EP300:0.775638700213;PATZ1:0.767115086029;RXRA_VDR{dimer}:0.761919116286;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.760541138469;ZNF384:0.719652610132;HOX{A5,B5}:0.706002244681;SREBF1,2:0.691851952457;EN1,2:0.675840728399;REST:0.673008311756;SP1:0.653561409713;GTF2I:0.647151698544;MYFfamily:0.645715040075;ZFP161:0.590562536519;NKX6-1,2:0.582624198576;EBF1:0.58068224993;CDX1,2,4:0.567388972526;GTF2A1,2:0.565695073793;POU6F1:0.553253489478;FOXQ1:0.521059695789;FOX{D1,D2}:0.508037036545;NFIX:0.479437598256;ALX4:0.469030953694;HNF4A_NR2F1,2:0.463063534242;STAT2,4,6:0.416745121255;MZF1:0.415857435684;ESR1:0.39894004816;LMO2:0.370454336201;IRF1,2:0.3552956144;ZNF238:0.353012899079;BREu{core}:0.343033039465;MTE{core}:0.334811110834;CDC5L:0.320061647158;XCPE1{core}:0.301710218309;STAT1,3:0.240720820144;GLI1..3:0.224228448749;ATF6:0.217053491892;MYOD1:0.215115818616;ZBTB16:0.199724564217;ETS1,2:0.106125596651;BPTF:0.102341016484;GZF1:0.0990003881075;ZEB1:0.0793152822405;ATF2:0.0657385812844;ZBTB6:-0.0220205818962;TOPORS:-0.0364301946652;AIRE:-0.0415596469011;ALX1:-0.0477206489179;SOX17:-0.0595463875113;NANOG:-0.0827962333834;SOX{8,9,10}:-0.0844572658667;ZNF148:-0.099893103962;SPIB:-0.101670353504;PAX2:-0.119038077295;HSF1,2:-0.133560584756;SPI1:-0.155365453764;LHX3,4:-0.15919675528;FOX{F1,F2,J1}:-0.164322850489;FOXP3:-0.168082249165;SNAI1..3:-0.210696777162;FOSL2:-0.240625698678;LEF1_TCF7_TCF7L1,2:-0.282121754207;TP53:-0.299564647086;HNF1A:-0.339376588871;ATF4:-0.342214851812;GFI1:-0.355909838473;PAX1,9:-0.377002100119;HMGA1,2:-0.415881721201;FOXA2:-0.427435901384;JUN:-0.438315068005;ATF5_CREB3:-0.438416400784;YY1:-0.46065796744;DMAP1_NCOR{1,2}_SMARC:-0.472190787904;HOXA9_MEIS1:-0.498987896609;NANOG{mouse}:-0.521528199698;HLF:-0.528603396734;FOXN1:-0.545860875969;CEBPA,B_DDIT3:-0.549656215949;ELF1,2,4:-0.576989713617;NRF1:-0.611323189054;ARID5B:-0.625101228629;RFX2..5_RFXANK_RFXAP:-0.648772624032;ZNF143:-0.658839131385;RUNX1..3:-0.667766845661;NFKB1_REL_RELA:-0.681113432829;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.722717368889;PBX1:-0.757785044496;NKX3-1:-0.795261411269;POU1F1:-0.816197627322;POU5F1:-0.82879306118;FOXP1:-0.838737030095;STAT5{A,B}:-0.858443453321;FOXD3:-0.868308241524;TEF:-0.874072172437;NFE2:-0.912992891426;ONECUT1,2:-0.94369433934;NFIL3:-0.952438007565;TAL1_TCF{3,4,12}:-0.968409957869;SOX2:-1.00785553893;RFX1:-1.02052511399;NFY{A,B,C}:-1.02056837225;FOS_FOS{B,L1}_JUN{B,D}:-1.02184736125;VSX1,2:-1.02415115445;BACH2:-1.04908635792;NFE2L2:-1.06550156589;PAX3,7:-1.09394925886;E2F1..5:-1.12686241432;PAX8:-1.13767400399;CREB1:-1.16247405329;FOXM1:-1.2030298316;CRX:-1.21564069254;ADNP_IRX_SIX_ZHX:-1.22714289348;PITX1..3:-1.24782326313;TFDP1:-1.25599474064;HES1:-1.2769841454;OCT4_SOX2{dimer}:-1.33281717991;bHLH_family:-1.34726798879;NKX2-3_NKX2-5:-1.38770982539;AHR_ARNT_ARNT2:-1.40293863165;HIF1A:-1.5245373594;DBP:-1.60551097191;POU2F1..3:-1.63629335256;PRRX1,2:-1.67427981698;HBP1_HMGB_SSRP1_UBTF:-1.78040267279;MYB:-1.80833721091;FOX{I1,J2}:-1.86883325595;ELK1,4_GABP{A,B1}:-1.92479817847;PAX4:-2.00982757009 | ||
|xref= | |xref= | ||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10079-102A7;search_select_hide=table117:FF:10079-102A7 | |||
}} | }} |
Latest revision as of 12:20, 3 June 2020
Name: | left atrium, adult, donor1 |
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Species: | Human (Homo sapiens) |
Library ID: | CNhs11790 |
Sample type: | tissues |
Genomic View: | UCSC |
RefEX: | Specific genes |
FANTOM CAT: | 1, 2, 3, 4 |
CAGEd-oPOSSUM: | link |
ZENBU report : | link |
Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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Download raw sequence, BAM & CTSS | ||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11790
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11790
Novel motif | Logo | P-value |
---|---|---|
1 | 1 | 0.798 |
10 | 10 | 0.105 |
100 | 100 | 0.441 |
101 | 101 | 0.83 |
102 | 102 | 0.684 |
103 | 103 | 0.977 |
104 | 104 | 0.267 |
105 | 105 | 0.777 |
106 | 106 | 0.275 |
107 | 107 | 0.0285 |
108 | 108 | 0.152 |
109 | 109 | 0.381 |
11 | 11 | 0.932 |
110 | 110 | 0.378 |
111 | 111 | 0.386 |
112 | 112 | 0.153 |
113 | 113 | 0.136 |
114 | 114 | 0.776 |
115 | 115 | 0.0414 |
116 | 116 | 0.156 |
117 | 117 | 0.0103 |
118 | 118 | 0.0219 |
119 | 119 | 0.0801 |
12 | 12 | 0.323 |
120 | 120 | 0.187 |
121 | 121 | 0.701 |
122 | 122 | 0.222 |
123 | 123 | 0.0165 |
124 | 124 | 0.908 |
125 | 125 | 0.857 |
126 | 126 | 0.459 |
127 | 127 | 0.732 |
128 | 128 | 0.0818 |
129 | 129 | 0.326 |
13 | 13 | 0.101 |
130 | 130 | 0.728 |
131 | 131 | 0.181 |
132 | 132 | 0.0424 |
133 | 133 | 0.0223 |
134 | 134 | 0.0469 |
135 | 135 | 0.0602 |
136 | 136 | 0.147 |
137 | 137 | 0.669 |
138 | 138 | 0.23 |
139 | 139 | 0.38 |
14 | 14 | 0.807 |
140 | 140 | 0.329 |
141 | 141 | 0.52 |
142 | 142 | 0.862 |
143 | 143 | 0.333 |
144 | 144 | 0.417 |
145 | 145 | 0.614 |
146 | 146 | 0.718 |
147 | 147 | 0.00465 |
148 | 148 | 0.158 |
149 | 149 | 0.036 |
15 | 15 | 0.251 |
150 | 150 | 0.896 |
151 | 151 | 0.414 |
152 | 152 | 0.237 |
153 | 153 | 0.476 |
154 | 154 | 0.838 |
155 | 155 | 0.881 |
156 | 156 | 0.889 |
157 | 157 | 0.98 |
158 | 158 | 0.276 |
159 | 159 | 0.594 |
16 | 16 | 0.941 |
160 | 160 | 0.395 |
161 | 161 | 0.422 |
162 | 162 | 0.903 |
163 | 163 | 0.501 |
164 | 164 | 0.0769 |
165 | 165 | 0.281 |
166 | 166 | 0.013 |
167 | 167 | 0.23 |
168 | 168 | 0.295 |
169 | 169 | 0.217 |
17 | 17 | 0.951 |
18 | 18 | 0.812 |
19 | 19 | 0.0323 |
2 | 2 | 0.0406 |
20 | 20 | 0.00672 |
21 | 21 | 0.823 |
22 | 22 | 0.29 |
23 | 23 | 0.0548 |
24 | 24 | 0.0405 |
25 | 25 | 0.295 |
26 | 26 | 0.175 |
27 | 27 | 0.194 |
28 | 28 | 0.254 |
29 | 29 | 0.0341 |
3 | 3 | 0.583 |
30 | 30 | 0.105 |
31 | 31 | 0.57 |
32 | 32 | 0.455 |
33 | 33 | 0.135 |
34 | 34 | 0.117 |
35 | 35 | 0.888 |
36 | 36 | 0.184 |
37 | 37 | 0.676 |
38 | 38 | 0.87 |
39 | 39 | 0.0996 |
4 | 4 | 0.33 |
40 | 40 | 0.0376 |
41 | 41 | 0.93 |
42 | 42 | 0.17 |
43 | 43 | 0.673 |
44 | 44 | 0.0437 |
45 | 45 | 0.15 |
46 | 46 | 0.825 |
47 | 47 | 0.515 |
48 | 48 | 0.394 |
49 | 49 | 0.712 |
5 | 5 | 0.952 |
50 | 50 | 0.977 |
51 | 51 | 0.946 |
52 | 52 | 0.161 |
53 | 53 | 0.767 |
54 | 54 | 0.479 |
55 | 55 | 0.582 |
56 | 56 | 0.541 |
57 | 57 | 0.153 |
58 | 58 | 0.736 |
59 | 59 | 0.207 |
6 | 6 | 0.75 |
60 | 60 | 0.389 |
61 | 61 | 0.17 |
62 | 62 | 0.977 |
63 | 63 | 0.906 |
64 | 64 | 0.772 |
65 | 65 | 0.283 |
66 | 66 | 0.0027 |
67 | 67 | 0.744 |
68 | 68 | 0.248 |
69 | 69 | 0.811 |
7 | 7 | 0.393 |
70 | 70 | 0.352 |
71 | 71 | 0.218 |
72 | 72 | 0.762 |
73 | 73 | 0.729 |
74 | 74 | 0.569 |
75 | 75 | 0.0329 |
76 | 76 | 0.0569 |
77 | 77 | 0.0196 |
78 | 78 | 0.815 |
79 | 79 | 0.0362 |
8 | 8 | 0.748 |
80 | 80 | 0.764 |
81 | 81 | 0.686 |
82 | 82 | 0.092 |
83 | 83 | 0.517 |
84 | 84 | 0.264 |
85 | 85 | 0.0455 |
86 | 86 | 0.539 |
87 | 87 | 0.0406 |
88 | 88 | 0.969 |
89 | 89 | 0.0538 |
9 | 9 | 0.424 |
90 | 90 | 0.207 |
91 | 91 | 0.0547 |
92 | 92 | 0.312 |
93 | 93 | 0.474 |
94 | 94 | 0.131 |
95 | 95 | 0.0453 |
96 | 96 | 0.606 |
97 | 97 | 0.809 |
98 | 98 | 0.975 |
99 | 99 | 0.108 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11790
FANTOM5 (FF) ontology
Direct parent terms
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0007100 (primary circulatory organ)
0000948 (heart)
0002079 (left cardiac atrium)
0000479 (tissue)
0000064 (organ part)
0010314 (structure with developmental contribution from neural crest)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003103 (compound organ)
0002081 (cardiac atrium)
0004151 (cardiac chamber)
0010317 (germ layer / neural crest derived structure)
0004535 (cardiovascular system)
0001009 (circulatory system)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0000004 (tissue sample)
0010079 (human left atrium - adult sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0002532 (epiblast (generic))
UBERON:0006603 (presumptive mesoderm)
UBERON:0010227 (future cardiac atrium)
UBERON:0010316 (germ layer / neural crest)