FF:11655-122E8: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet= | |DRA_sample_Accession=CAGE@SAMD00005711 | ||
|ancestors_in_cell_lineage_facet=CL:0000000 | |accession_numbers=CAGE;DRX008377;DRR009249;DRZ000674;DRZ002059;DRZ012024;DRZ013409 | ||
|ancestors_in_anatomy_facet= | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000540,CL:0000003,CL:0000548,CL:0002371,CL:0002319,CL:0000393,CL:0000211,CL:0000404,CL:0000255 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000348 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score=chr17:37764128..37764258,-!p1@NEUROD2!2.48!304.30!NEUROD2;;chr14:29235961..29236008,+!p1@FOXG1!2.45!280.69!FOXG1;;chr2:5832508..5832524,+!p1@SOX11!2.44!274.31!SOX11;;chr2:105470562..105470582,+!p@chr2:105470562..105470582,+!2.31!203.50!POU3F3;;chr7:31380292..31380351,-!p1@NEUROD6!2.25!176.07!NEUROD6;;chr4:81118647..81118666,+!p1@PRDM8!2.16!185.00!PRDM8;;chr3:181429704..181429722,+!p1@SOX2!2.12!131.42!SOX2;;chrX:25034067..25034088,-!p1@ARX!2.10!125.04!ARX;;chr20:20348740..20348757,+!p1@INSM1!2.09!121.21!INSM1;;chr2:5832493..5832507,+!p2@SOX11!2.04!109.73!SOX11;;chr1:151032922..151032951,+!p2@MLLT11!2.03!172.24!MLLT11;;chr1:244214577..244214593,+!p1@ZNF238!1.99!96.33!ZNF238;;chr9:126773880..126773895,+!p2@LHX2!1.96!89.31!LHX2;;chr14:29234581..29234601,+!p2@FOXG1!1.80!62.52!FOXG1;;chr14:29236269..29236285,+!p3@FOXG1!1.79!59.97!FOXG1;;chr8:65492756..65492768,+!p2@BHLHE22!1.77!57.41!BHLHE22;;chr2:105470536..105470556,+!p@chr2:105470536..105470556,+!1.76!56.14!POU3F3;;chr9:126774018..126774055,+!p1@LHX2!1.75!54.86!LHX2;;chr2:60780607..60780624,-!p2@BCL11A!1.73!156.29!BCL11A;;chr2:162272785..162272836,+!p1@TBR1!1.71!49.76!TBR1;;chr12:103351444..103351461,+!p1@ASCL1!1.71!49.76!ASCL1;;chr3:181429741..181429767,+!p2@SOX2!1.64!42.74!SOX2;;chr1:151032860..151032918,+!p1@MLLT11!1.63!472.07!MLLT11;;chr7:96654133..96654150,-!p1@DLX5!1.63!42.10!DLX5;;chr7:100065686..100065701,-!p2@TSC22D4!1.62!40.83!TSC22D4;;chr2:60780753..60780800,-!p1@BCL11A!1.59!179.90!BCL11A;;chrX:82763292..82763317,+!p1@POU3F4!1.59!38.28!POU3F4;;chr2:239148671..239148686,-!p1@HES6!1.58!130.78!HES6;;chr6:19837592..19837621,+!p1@ID4!1.57!213.71!ID4;;chr6:21594252..21594285,+!p11@SOX4!1.54!37.64!SOX4;;chr2:2334997..2335053,-!p1@MYT1L!1.52!31.90!MYT1L;;chr19:38720294..38720348,-!p1@DPF1!1.49!37.00!DPF1;;chr19:13134772..13134822,+!p2@NFIX!1.48!42.74!NFIX;;chr4:113437332..113437337,-!p1@NEUROG2!1.48!29.35!NEUROG2;;chr1:151032957..151032968,+!p7@MLLT11!1.47!28.71!MLLT11;;chrX:84498989..84499003,+!p1@ZNF711!1.44!36.36!ZNF711;;chr2:16080659..16080685,+!p1@MYCN!1.43!26.16!MYCN;;chr6:21597765..21597779,+!p2@SOX4!1.42!195.85!SOX4;;chr14:29237009..29237049,+!p4@FOXG1!1.41!24.88!FOXG1;;chr4:57547454..57547469,-!p1@HOPX!1.41!24.88!HOPX;;chr1:244214611..244214624,+!p4@ZNF238!1.40!24.24!ZNF238;;chr6:21594206..21594221,+!p15@SOX4!1.38!22.97!SOX4;;chr12:24102576..24102623,-!p2@SOX5!1.38!22.97!SOX5;;chr11:63684602..63684664,-!p1@RCOR2!1.35!41.47!RCOR2;;chr5:92919100..92919135,+!p3@NR2F1!1.35!26.16!NR2F1;;chr11:31832658..31832681,-!p1@PAX6!1.33!20.41!PAX6;;chr2:182545234..182545252,-!p1@NEUROD1!1.32!19.78!NEUROD1;;chr2:172967621..172967637,-!p1@DLX2!1.31!51.04!DLX2;;chr6:21593973..21593988,+!p1@SOX4!1.30!651.97!SOX4;;chr15:57511609..57511651,+!p2@TCF12!1.30!31.26!TCF12;;chr1:244219775..244219893,+!p2@ZNF238!1.30!25.52!ZNF238;;chr19:47523058..47523114,+!p1@NPAS1!1.30!19.14!NPAS1;;chr2:162272889..162272915,+!p2@TBR1!1.30!19.14!TBR1;;chr2:63277948..63277974,+!p1@OTX1!1.29!18.50!OTX1;;chr3:27764190..27764208,-!p2@EOMES!1.29!18.50!EOMES;;chr13:72441074..72441172,-!p2@DACH1!1.29!18.50!DACH1;;chr14:29236301..29236317,+!p5@FOXG1!1.29!18.50!FOXG1;;chr9:126774058..126774081,+!p3@LHX2!1.29!18.50!LHX2;;chr15:37392094..37392116,-!p6@MEIS2!1.28!22.33!MEIS2;;chr10:118897911..118897974,-!p1@VAX1!1.28!17.86!VAX1;;chr12:111471526..111471541,+!p1@CUX2!1.28!17.86!CUX2;;chr5:92918919..92918942,+!p1@NR2F1!1.27!77.83!NR2F1;;chr2:200322229..200322251,-!p3@SATB2!1.26!17.22!SATB2;;chr2:200322723..200322739,-!p6@SATB2!1.26!17.22!SATB2;;chr11:31832862..31832884,-!p2@PAX6!1.26!17.22!PAX6;;chr8:65492915..65492932,+!p1@BHLHE22!1.25!16.59!BHLHE22;;chr16:51185172..51185197,-!p1@SALL1!1.25!16.59!SALL1;;chr1:2461692..2461710,-!p1@HES5!1.25!16.59!HES5;;chr1:41827095..41827155,+!p1@FOXO6!1.24!22.33!FOXO6;;chr10:119302232..119302265,+!p1@EMX2!1.23!15.95!EMX2;;chr20:2673383..2673441,+!p1@EBF4!1.22!24.88!EBF4;;chr9:20621927..20621996,-!p3@MLLT3!1.21!25.52!MLLT3;;chr20:55204351..55204377,+!p1@TFAP2C!1.21!19.14!TFAP2C;;chr18:53068911..53068935,-!p4@TCF4!1.21!17.22!TCF4;;chr11:31839488..31839515,-!p3@PAX6!1.21!15.31!PAX6;;chr2:172949484..172949522,+!p1@DLX1!1.21!15.31!DLX1;;chrX:84499081..84499115,+!p2@ZNF711!1.20!21.69!ZNF711;;chr15:37392724..37392757,-!p1@MEIS2!1.19!65.71!MEIS2;;chr2:2335109..2335134,-!p2@MYT1L!1.18!14.03!MYT1L;;chr1:50889103..50889145,-!p1@DMRTA2!1.18!14.03!DMRTA2;;chr5:92919068..92919082,+!p5@NR2F1!1.16!15.95!NR2F1;;chr6:99282438..99282457,+!p2@POU3F2!1.16!13.40!POU3F2;;chr6:99282570..99282591,+!p4@POU3F2!1.16!13.40!POU3F2;;chr19:13135582..13135600,+!p3@NFIX!1.16!13.40!NFIX;;chr2:60780871..60780882,-!p16@BCL11A!1.16!13.40!BCL11A;;chr14:33403881..33403924,+!p1@NPAS3!1.16!13.40!NPAS3;;chr5:92918894..92918912,+!p2@NR2F1!1.15!43.38!NR2F1;;chr13:72441315..72441454,-!p1@DACH1!1.15!26.16!DACH1;;chr4:81105027..81105039,+!p3@PRDM8!1.15!15.31!PRDM8;;chr2:162272716..162272753,+!p3@TBR1!1.14!12.76!TBR1;;chr2:172950227..172950249,+!p2@DLX1!1.14!12.76!DLX1;;chr11:31832807..31832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945,+!p3@ZNF441!0.40!1.91!ZNF441;;chr20:33330556..33330569,-!p6@NCOA6!0.40!1.91!NCOA6;;chr6:20402070..20402082,+!p5@E2F3!0.40!1.91!E2F3;;chr7:99679311..99679322,-!p3@ZNF3!0.40!1.91!ZNF3;;chr8:103666182..103666197,-!p4@KLF10!0.40!1.91!KLF10;;chr3:52001448..52001478,-!p2@PCBP4!0.39!30.62!PCBP4;;chr17:38219209..38219230,+!p1@THRA!0.39!28.71!THRA;;chr1:161015706..161015747,-!p1@USF1!0.39!26.16!USF1;;chr19:9695195..9695221,-!p2@ZNF121!0.39!24.88!ZNF121;;chr9:94186131..94186174,-!p2@NFIL3!0.39!17.86!NFIL3;;chr6:28193037..28193086,+!p1@ZNF193!0.39!17.22!ZNF193;;chr16:89284104..89284150,+!p1@ZNF778!0.39!15.31!ZNF778;;chr13:45151259..45151326,-!p2@TSC22D1!0.39!12.76!TSC22D1;;chr19:37701396..37701453,-!p1@ZNF585B!0.39!12.12!ZNF585B;;chr5:56247935..56247959,-!p1@MIER3!0.39!11.48!MIER3;;chr16:2273645..2273671,+!p2@E4F1!0.39!10.84!E4F1;;chr16:30621663..30621718,-!p1@ZNF689!0.39!10.21!ZNF689;;chr5:88179017..88179046,-!p2@MEF2C!0.39!8.29!MEF2C;;chr19:38085633..38085706,-!p1@ZNF571!0.39!5.10!ZNF571;;chr19:21203481..21203504,+!p2@ZNF430!0.39!4.47!ZNF430;;chr1:35656397..35656455,-!p3@SFPQ!0.39!4.47!SFPQ;;chr14:89628064..89628109,-!p4@FOXN3!0.39!3.83!FOXN3;;chr19:21512115..21512135,-!p3@ZNF708!0.39!3.83!ZNF708;;chr16:29817399..29817425,+!p13@MAZ!0.39!3.19!MAZ;;chr19:56988677..56988729,-!p1@ZNF667!0.39!3.19!ZNF667;;chr4:38665659..38665670,+!p6@KLF3!0.39!3.19!KLF3;;chr7:64254771..64254782,+!p3@ZNF138!0.39!3.19!ZNF138;;chr12:124457725..124457736,+!p2@ZNF664!0.39!3.19!ZNF664;;chr12:49445984..49446002,-!p3@MLL2!0.39!2.55!MLL2;;chr19:12203069..12203094,+!p2@ZNF788!0.39!2.55!ZNF788;;chr17:38498510..38498540,+!p7@RARA!0.39!1.91!RARA;;chr12:104532062..104532071,-!p6@NFYB!0.39!1.91!NFYB;;chr12:53856262..53856278,+!p12@PCBP2!0.39!1.91!PCBP2;;chr1:27022270..27022282,+!p10@ARID1A!0.39!1.91!ARID1A;;chr22:39916289..39916302,+!p3@ATF4!0.39!1.91!ATF4;;chr6:134274354..134274371,+!p1@TBPL1!0.38!57.41!TBPL1;;chr19:52772832..52772861,+!p1@ZNF766!0.38!21.69!ZNF766;;chr12:125052112..125052172,-!p2@NCOR2!0.38!19.14!NCOR2;;chr19:21950362..21950388,-!p1@ZNF100!0.38!19.14!ZNF100;;chr12:51566849..51566927,-!p1@TFCP2!0.38!17.86!TFCP2;;chr19:58011258..58011317,+!p1@ZNF773!0.38!15.95!ZNF773;;chr19:44529479..44529542,+!p1@ZNF222,p1@ZNF284!0.38!8.93!ZNF222;;chr13:20357110..20357121,-!p2@PSPC1!0.38!5.10!PSPC1;;chr19:37958318..37958365,-!p2@ZNF569!0.38!5.10!ZNF569;;chr19:12035878..12035902,+!p2@ZNF700,p2@ZNF763!0.38!4.47!ZNF700;;chr19:22018938..22018963,-!p3@ZNF43!0.38!4.47!ZNF43;;chr12:133758115..133758138,+!p3@ZNF268!0.38!4.47!ZNF268;;chr19:47615426..47615439,-!p5@ZC3H4!0.38!4.47!ZC3H4;;chr19:52408285..52408310,-!p3@ZNF649!0.38!4.47!ZNF649;;chr19:58951496..58951539,-!p1@ZNF132!0.38!4.47!ZNF132;;chr6:26659967..26659982,-!p1@ZNF322P1,p1@ZNF322!0.38!3.83!ZNF322;;chr7:148823387..148823440,-!p1@ZNF425!0.38!3.19!ZNF425;;chr16:30621615..30621660,-!p2@ZNF689!0.38!3.19!ZNF689;;chr19:37407172..37407217,-!p2@ZNF829!0.38!3.19!ZNF829;;chr3:52001396..52001425,-!p4@PCBP4!0.38!3.19!PCBP4;;chr19:57999082..57999095,+!p2@ZNF419!0.38!2.55!ZNF419;;chr18:42260030..42260055,+!p3@SETBP1!0.38!1.91!SETBP1;;chr19:10291229..10291247,-!p5@DNMT1!0.38!1.91!DNMT1;;chr19:20844346..20844351,-!p2@ZNF626!0.38!1.91!ZNF626;;chr19:37861994..37862013,+!p2@ZNF527!0.38!1.91!ZNF527;;chr22:41864662..41864708,-!p1@PHF5A!0.37!89.95!PHF5A;;chr12:124457746..124457828,+!p1@ZNF664!0.37!81.02!ZNF664;;chr13:115079949..115080022,+!p1@CHAMP1!0.37!58.69!CHAMP1;;chr19:57874835..57874966,+!p1@TRAPPC2P1,p1@TRAPPC2,p1@ZNF547!0.37!39.55!ZNF547;;chr17:3571887..3571918,-!p2@TAX1BP3!0.37!23.60!TAX1BP3;;chr19:21203451..21203475,+!p1@ZNF430!0.37!21.05!ZNF430;;chr19:52531600..52531685,-!p1@ZNF614!0.37!19.14!ZNF614;;chr1:53019059..53019176,-!p2@ZCCHC11!0.37!18.50!ZCCHC11;;chr12:133532864..133532899,-!p1@ZNF605!0.37!15.31!ZNF605;;chr1:120190786..120190915,-!p1@ZNF697!0.37!14.67!ZNF697;;chr19:57831829..57831890,+!p1@ZNF543!0.37!12.76!ZNF543;;chr19:58258167..58258201,+!p1@ZNF776!0.37!12.12!ZNF776;;chr19:58144529..58144579,+!p1@ZNF211!0.37!10.84!ZNF211;; | |expression_enrichment_score=chr17:37764128..37764258,-!p1@NEUROD2!2.48!304.30!NEUROD2;;chr14:29235961..29236008,+!p1@FOXG1!2.45!280.69!FOXG1;;chr2:5832508..5832524,+!p1@SOX11!2.44!274.31!SOX11;;chr2:105470562..105470582,+!p@chr2:105470562..105470582,+!2.31!203.50!POU3F3;;chr7:31380292..31380351,-!p1@NEUROD6!2.25!176.07!NEUROD6;;chr4:81118647..81118666,+!p1@PRDM8!2.16!185.00!PRDM8;;chr3:181429704..181429722,+!p1@SOX2!2.12!131.42!SOX2;;chrX:25034067..25034088,-!p1@ARX!2.10!125.04!ARX;;chr20:20348740..20348757,+!p1@INSM1!2.09!121.21!INSM1;;chr2:5832493..5832507,+!p2@SOX11!2.04!109.73!SOX11;;chr1:151032922..151032951,+!p2@MLLT11!2.03!172.24!MLLT11;;chr1:244214577..244214593,+!p1@ZNF238!1.99!96.33!ZNF238;;chr9:126773880..126773895,+!p2@LHX2!1.96!89.31!LHX2;;chr14:29234581..29234601,+!p2@FOXG1!1.80!62.52!FOXG1;;chr14:29236269..29236285,+!p3@FOXG1!1.79!59.97!FOXG1;;chr8:65492756..65492768,+!p2@BHLHE22!1.77!57.41!BHLHE22;;chr2:105470536..105470556,+!p@chr2:105470536..105470556,+!1.76!56.14!POU3F3;;chr9:126774018..126774055,+!p1@LHX2!1.75!54.86!LHX2;;chr2:60780607..60780624,-!p2@BCL11A!1.73!156.29!BCL11A;;chr2:162272785..162272836,+!p1@TBR1!1.71!49.76!TBR1;;chr12:103351444..103351461,+!p1@ASCL1!1.71!49.76!ASCL1;;chr3:181429741..181429767,+!p2@SOX2!1.64!42.74!SOX2;;chr1:151032860..151032918,+!p1@MLLT11!1.63!472.07!MLLT11;;chr7:96654133..96654150,-!p1@DLX5!1.63!42.10!DLX5;;chr7:100065686..100065701,-!p2@TSC22D4!1.62!40.83!TSC22D4;;chr2:60780753..60780800,-!p1@BCL11A!1.59!179.90!BCL11A;;chrX:82763292..82763317,+!p1@POU3F4!1.59!38.28!POU3F4;;chr2:239148671..239148686,-!p1@HES6!1.58!130.78!HES6;;chr6:19837592..19837621,+!p1@ID4!1.57!213.71!ID4;;chr6:21594252..21594285,+!p11@SOX4!1.54!37.64!SOX4;;chr2:2334997..2335053,-!p1@MYT1L!1.52!31.90!MYT1L;;chr19:38720294..38720348,-!p1@DPF1!1.49!37.00!DPF1;;chr19:13134772..13134822,+!p2@NFIX!1.48!42.74!NFIX;;chr4:113437332..113437337,-!p1@NEUROG2!1.48!29.35!NEUROG2;;chr1:151032957..151032968,+!p7@MLLT11!1.47!28.71!MLLT11;;chrX:84498989..84499003,+!p1@ZNF711!1.44!36.36!ZNF711;;chr2:16080659..16080685,+!p1@MYCN!1.43!26.16!MYCN;;chr6:21597765..21597779,+!p2@SOX4!1.42!195.85!SOX4;;chr14:29237009..29237049,+!p4@FOXG1!1.41!24.88!FOXG1;;chr4:57547454..57547469,-!p1@HOPX!1.41!24.88!HOPX;;chr1:244214611..244214624,+!p4@ZNF238!1.40!24.24!ZNF238;;chr6:21594206..21594221,+!p15@SOX4!1.38!22.97!SOX4;;chr12:24102576..24102623,-!p2@SOX5!1.38!22.97!SOX5;;chr11:63684602..63684664,-!p1@RCOR2!1.35!41.47!RCOR2;;chr5:92919100..92919135,+!p3@NR2F1!1.35!26.16!NR2F1;;chr11:31832658..31832681,-!p1@PAX6!1.33!20.41!PAX6;;chr2:182545234..182545252,-!p1@NEUROD1!1.32!19.78!NEUROD1;;chr2:172967621..172967637,-!p1@DLX2!1.31!51.04!DLX2;;chr6:21593973..21593988,+!p1@SOX4!1.30!651.97!SOX4;;chr15:57511609..57511651,+!p2@TCF12!1.30!31.26!TCF12;;chr1:244219775..244219893,+!p2@ZNF238!1.30!25.52!ZNF238;;chr19:47523058..47523114,+!p1@NPAS1!1.30!19.14!NPAS1;;chr2:162272889..162272915,+!p2@TBR1!1.30!19.14!TBR1;;chr2:63277948..63277974,+!p1@OTX1!1.29!18.50!OTX1;;chr3:27764190..27764208,-!p2@EOMES!1.29!18.50!EOMES;;chr13:72441074..72441172,-!p2@DACH1!1.29!18.50!DACH1;;chr14:29236301..29236317,+!p5@FOXG1!1.29!18.50!FOXG1;;chr9:126774058..126774081,+!p3@LHX2!1.29!18.50!LHX2;;chr15:37392094..37392116,-!p6@MEIS2!1.28!22.33!MEIS2;;chr10:118897911..118897974,-!p1@VAX1!1.28!17.86!VAX1;;chr12:111471526..111471541,+!p1@CUX2!1.28!17.86!CUX2;;chr5:92918919..92918942,+!p1@NR2F1!1.27!77.83!NR2F1;;chr2:200322229..200322251,-!p3@SATB2!1.26!17.22!SATB2;;chr2:200322723..200322739,-!p6@SATB2!1.26!17.22!SATB2;;chr11:31832862..31832884,-!p2@PAX6!1.26!17.22!PAX6;;chr8:65492915..65492932,+!p1@BHLHE22!1.25!16.59!BHLHE22;;chr16:51185172..51185197,-!p1@SALL1!1.25!16.59!SALL1;;chr1:2461692..2461710,-!p1@HES5!1.25!16.59!HES5;;chr1:41827095..41827155,+!p1@FOXO6!1.24!22.33!FOXO6;;chr10:119302232..119302265,+!p1@EMX2!1.23!15.95!EMX2;;chr20:2673383..2673441,+!p1@EBF4!1.22!24.88!EBF4;;chr9:20621927..20621996,-!p3@MLLT3!1.21!25.52!MLLT3;;chr20:55204351..55204377,+!p1@TFAP2C!1.21!19.14!TFAP2C;;chr18:53068911..53068935,-!p4@TCF4!1.21!17.22!TCF4;;chr11:31839488..31839515,-!p3@PAX6!1.21!15.31!PAX6;;chr2:172949484..172949522,+!p1@DLX1!1.21!15.31!DLX1;;chrX:84499081..84499115,+!p2@ZNF711!1.20!21.69!ZNF711;;chr15:37392724..37392757,-!p1@MEIS2!1.19!65.71!MEIS2;;chr2:2335109..2335134,-!p2@MYT1L!1.18!14.03!MYT1L;;chr1:50889103..50889145,-!p1@DMRTA2!1.18!14.03!DMRTA2;;chr5:92919068..92919082,+!p5@NR2F1!1.16!15.95!NR2F1;;chr6:99282438..99282457,+!p2@POU3F2!1.16!13.40!POU3F2;;chr6:99282570..99282591,+!p4@POU3F2!1.16!13.40!POU3F2;;chr19:13135582..13135600,+!p3@NFIX!1.16!13.40!NFIX;;chr2:60780871..60780882,-!p16@BCL11A!1.16!13.40!BCL11A;;chr14:33403881..33403924,+!p1@NPAS3!1.16!13.40!NPAS3;;chr5:92918894..92918912,+!p2@NR2F1!1.15!43.38!NR2F1;;chr13:72441315..72441454,-!p1@DACH1!1.15!26.16!DACH1;;chr4:81105027..81105039,+!p3@PRDM8!1.15!15.31!PRDM8;;chr2:162272716..162272753,+!p3@TBR1!1.14!12.76!TBR1;;chr2:172950227..172950249,+!p2@DLX1!1.14!12.76!DLX1;;chr11:31832807..31832823,-!p4@PAX6!1.14!12.76!PAX6;;chr14:29236169..29236216,+!p6@FOXG1!1.14!12.76!FOXG1;;chr5:124082322..124082364,-!p1@ZNF608!1.12!31.26!ZNF608;;chr1:38512457..38512474,-!p1@POU3F1!1.12!13.40!POU3F1;;chr6:99282475..99282501,+!p1@POU3F2!1.12!12.12!POU3F2;;chr13:100634031..100634045,+!p1@ZIC2!1.12!12.12!ZIC2;;chr19:58220517..58220583,-!p1@ZNF154!1.10!37.00!ZNF154;;chr13:95364784..95364806,-!p1@SOX21!1.10!11.48!SOX21;;chr2:105470714..105470723,+!p@chr2:105470714..105470723,+!1.10!11.48!POU3F3;;chr3:147127177..147127194,+!p2@ZIC1!1.10!11.48!ZIC1;;chr9:20622444..20622468,-!p2@MLLT3!1.09!37.00!MLLT3;;chr2:200322654..200322707,-!p2@SATB2!1.09!16.59!SATB2;;chr5:92919375..92919438,+!p6@NR2F1!1.09!12.12!NR2F1;;chr15:80696703..80696754,+!p1@ARNT2!1.08!14.67!ARNT2;;chr5:92918956..92918969,+!p4@NR2F1!1.08!12.12!NR2F1;;chr5:92918768..92918783,+!p8@NR2F1!1.07!10.84!NR2F1;;chr6:99282592..99282616,+!p3@POU3F2!1.07!10.84!POU3F2;;chr2:105470614..105470625,+!p@chr2:105470614..105470625,+!1.07!10.84!POU3F3;;chr1:244214655..244214666,+!p7@ZNF238!1.07!10.84!ZNF238;;chr9:14308004..14308041,-!p14@NFIB!1.07!10.84!NFIB;;chr18:52988979..52988993,-!p18@TCF4!1.07!10.84!TCF4;;chr18:53254566..53254567,-!p8@TCF4!1.06!17.22!TCF4;;chr9:77112244..77112262,+!p1@RORB!1.05!11.48!RORB;;chr2:200322259..200322280,-!p5@SATB2!1.05!10.21!SATB2;;chr9:14314131..14314147,-!p2@NFIB!1.04!56.14!NFIB;;chr1:214161272..214161322,+!p1@PROX1!1.02!13.40!PROX1;;chr19:58545454..58545498,+!p1@ZSCAN1!1.02!9.57!ZSCAN1;;chr4:57522598..57522664,-!p3@HOPX!1.02!9.57!HOPX;;chr9:14083467..14083483,-!p4@NFIB!1.01!22.97!NFIB;;chr6:21597514..21597578,+!p4@SOX4!1.01!15.95!SOX4;;chr6:91006518..91006570,-!p1@BACH2!1.00!21.05!BACH2;;chr6:108487289..108487302,+!p1@NR2E1!1.00!8.93!NR2E1;;chr8:53166899..53166914,-!p3@ST18!1.00!8.93!ST18;;chr9:124991204..124991246,-!p1@LHX6!1.00!8.93!LHX6;;chrY:2803415..2803468,+!p1@ZFY!1.00!8.93!ZFY;;chr2:175199675..175199688,+!p1@SP9!1.00!8.93!SP9;;chr2:200213794..200213807,-!p9@SATB2!1.00!8.93!SATB2;;chr3:147127142..147127168,+!p1@ZIC1!1.00!8.93!ZIC1;;chr1:116383738..116383752,-!p1@NHLH2!1.00!8.93!NHLH2;;chr16:51185318..51185348,-!p2@SALL1!1.00!8.93!SALL1;;chr18:53069419..53069450,-!p34@TCF4!1.00!8.93!TCF4;;chr14:58798013..58798071,+!p2@ARID4A!1.00!8.93!ARID4A;;chr5:88178983..88179012,-!p1@MEF2C!0.99!70.17!MEF2C;;chr6:21597600..21597664,+!p3@SOX4!0.99!14.67!SOX4;;chr7:6655225..6655279,+!p1@ENST00000457543!0.99!13.40!ZNF853;;chr9:14313893..14313908,-!p7@NFIB!0.99!12.76!NFIB;;chr19:44123734..44123796,-!p1@ZNF428!0.98!326.62!ZNF428;;chr15:37390850..37390909,-!p3@MEIS2!0.98!17.22!MEIS2;;chr14:73360799..73360817,-!p1@DPF3!0.97!29.98!DPF3;;chr11:31832581..31832601,-!p7@PAX6!0.97!8.29!PAX6;;chr12:106976774..106976788,+!p1@RFX4!0.97!8.29!RFX4;;chr2:60780730..60780742,-!p5@BCL11A!0.97!8.29!BCL11A;;chr5:124081979..124082021,-!p7@ZNF608!0.97!8.29!ZNF608;;chr6:21597687..21597708,+!p14@SOX4!0.97!8.29!SOX4;;chr9:20621834..20621884,-!p5@MLLT3!0.97!8.29!MLLT3;;chr2:166326200..166326216,+!p1@CSRNP3!0.96!12.12!CSRNP3;;chr15:37392616..37392638,-!p2@MEIS2!0.94!24.88!MEIS2;;chr3:44626446..44626477,+!p1@ZNF660!0.94!14.03!ZNF660;;chr8:80679993..80680011,-!p1@HEY1!0.94!11.48!HEY1;;chr18:42260920..42260951,+!p4@SETBP1!0.94!7.66!SETBP1;;chrX:84499056..84499078,+!p3@ZNF711!0.94!7.66!ZNF711;;chr10:119302268..119302282,+!p4@EMX2!0.94!7.66!EMX2;;chr2:175199697..175199706,+!p2@SP9!0.94!7.66!SP9;;chr2:60781201..60781258,-!p3@BCL11A!0.94!7.66!BCL11A;;chr3:114173720..114173794,-!p6@ZBTB20!0.94!7.66!ZBTB20;;chr3:181429641..181429650,+!p3@SOX2!0.94!7.66!SOX2;;chr1:167298300..167298319,+!p2@POU2F1!0.94!7.66!POU2F1;;chr18:52989001..52989030,-!p10@TCF4!0.93!8.29!TCF4;;chr2:208030647..208030689,-!p1@KLF7!0.92!64.43!KLF7;;chr19:19976683..19976709,+!p1@ZNF253!0.92!33.17!ZNF253;;chr8:77593474..77593612,+!p1@ZFHX4!0.92!31.90!ZFHX4;;chr3:33482052..33482116,-!p2@UBP1!0.92!11.48!UBP1;;chr1:23696348..23696363,-!p4@ZNF436!0.92!8.29!ZNF436;;chr18:52989031..52989079,-!p2@TCF4!0.91!17.22!TCF4;;chr18:42260059..42260132,+!p1@SETBP1!0.91!12.12!SETBP1;;chr1:61924375..61924380,+!p6@NFIA!0.91!10.21!NFIA;;chr6:21597283..21597312,+!p7@SOX4!0.91!9.57!SOX4;;chr9:109625401..109625458,+!p1@ZNF462!0.90!19.14!ZNF462;;chr5:92918860..92918871,+!p10@NR2F1!0.90!7.66!NR2F1;;chr7:31380440..31380451,-!p4@NEUROD6!0.90!7.02!NEUROD6;;chr8:93107451..93107468,-!p2@RUNX1T1!0.90!7.02!RUNX1T1;;chr18:42260840..42260860,+!p2@SETBP1!0.90!7.02!SETBP1;;chr18:53089493..53089517,-!p15@TCF4!0.90!7.02!TCF4;;chr2:172967017..172967029,-!p8@DLX2!0.90!7.02!DLX2;;chr9:126774091..126774098,+!p4@LHX2!0.90!7.02!LHX2;;chr14:29234870..29234930,+!p7@FOXG1!0.90!7.02!FOXG1;;chr15:37392576..37392589,-!p12@MEIS2!0.89!8.29!MEIS2;;chr18:53257027..53257052,-!p3@TCF4!0.88!27.43!TCF4;;chr9:14314106..14314119,-!p5@NFIB!0.88!12.12!NFIB;;chr2:25475120..25475176,-!p2@DNMT3A!0.88!8.93!DNMT3A;;chr15:37390482..37390572,-!p7@MEIS2!0.87!8.93!MEIS2;;chr6:21597431..21597447,+!p8@SOX4!0.87!8.29!SOX4;;chr5:88081308..88081333,-!p8@MEF2C!0.87!6.38!MEF2C;;chr8:93074803..9307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| ||
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000133;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000221;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000540;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002319;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001016 | |||
|ffid_belonging_in_development=CL:0000133,CL:0000031,CL:0000221 | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 42: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Neurons%252c%2520donor3.CNhs13815.11655-122E8.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Neurons%252c%2520donor3.CNhs13815.11655-122E8.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Neurons%252c%2520donor3.CNhs13815.11655-122E8.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Neurons%252c%2520donor3.CNhs13815.11655-122E8.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Neurons%252c%2520donor3.CNhs13815.11655-122E8.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11655-122E8 | |id=FF:11655-122E8 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000348 | ||
|is_obsolete= | |||
|library_id=CNhs13815 | |||
|library_id_phase_based=2:CNhs13815 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11655 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11655 | |||
|name=Neurons, donor3 | |name=Neurons, donor3 | ||
|namespace= | |namespace= | ||
| Line 44: | Line 63: | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq= | |profile_srnaseq= | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0,0,0,0,0,0.0539796278286231,0,-0.0630644742785049,0.488453153506638,0,0,0,0,0,0,0,0,0,0,0,0.464462161719081,0,0.311139151370653,0,0,0,0,0,0.452485105054228,0,0,0.804323780513556,0,0,0,0,0,0,0,0,0,0,0,0,0.135767463394214,0.464462161719081,0,0,0,0,0,0,0,0.08293380784467,0,0,0,0.214297657915009,0,0,0,0.999323044226041,0,0,0.367118534505984,0,0,0,0,0,0,0,0,0.214297657915009,0,0,0.107148828957504,0,0,0,0,0,0,0,0,0,0.219791917164715,0,0.124193485953016,0.0209724079736529,0.178574441456026,0,0,-0.086815664135224,0.436017223906367,0.178574441456026,0.357148882912052,0,0,-0.0980353512377064,0.620681549175639,0,0,0,0,0,0,0,0,0,0,0.107148828957504,0.214297657915009,0,0,0,0,0,0.0107752350350436,0.622182279778733,0,0,0,-0.180471281601546,0,0,0.357148882912052,0,0,0 | |||
|repeat_enrich_byname=0,0,0,0.214297657915009,-0.0980353512377064,0.357148882912052,0,0,0,0,0,0.357148882912052,0,0.357148882912052,0,0,-0.0328812173705553,0.178574441456026,0.20964798447349,-0.143515142523472,0.107148828957504,0,-0.0584613063483596,0,0,0,0.059747818461934,0.357148882912052,0.214297657915009,0.357148882912052,0,0.996999214553172,0.229029015959488,0,-0.0504125515893149,0.107148828957504,0,0,0,0,-0.305472230898407,0,0.324241546127077,0.145953396837641,0,0,0,0,-0.270240669334324,0,0.429563517528545,-0.0827201683234173,0.737635561122422,0.179314170885585,0.158585161133827,0,0,0.392789830699665,0.659629590874171,0.15871448224411,0,0,-0.0146310227943694,0.158030291256385,0,0,-0.176746923636626,0,-0.115792422218397,-0.0989079077409031,0,0.214297657915009,0,0,0,0,1.35306898538466,0.214297657915009,0,0.214297657915009,0.622182279778733,0,0,0.25359767306793,-0.326988596678969,0,0,0,0.0397507784048868,-0.544376987124342,0.0496128156859605,0.0829831414932279,-0.373286155956567,-0.0737772028311903,0.0453675538218986,0.0130851896456181,0,0.381344476215585,0.0303692622707075,-0.359294360361519,0.367103824433013,0.474780430407594,0.0243159383651618,0.149937574062373,0.228446385215614,0.569560288765232,0.252596663440307,0.0209724079736529,0.158525547941408,-0.113446991781983,-0.0437259140807011,0,0,-0.0244410488277242,-0.0275082261150076,0.0403358210008039,-0.0445466957103022,-0.132965831564721,0.149003398279477,0.170569722643384,0.269008544431191,0.224649042911547,0.125753144817865,0.783577230222317,0.164745826882138,0.21012154509679,-0.010766802588133,0.214297657915009,0,0.117175547868345,0.185264871237448,-0.0482765459849006,0.0063561066000537,0.0487291642365014,-0.483977461810981,-0.0683442610773682,0.80918785207575,0.507840782048271,0.448657842459441,0,0.176533158544956,-0.114315069152331,0,0,-0.0613404187575235,0.214297657915009,0.214297657915009,-0.000585845436652521,-0.182343260118114,0.124293321356507,0.0122076799897233,-0.0219494443175252,-0.00520187019120306,0.0445810212601626,0,0.0240756438139282,-0.202170761610805,0,0.404173511324803,0.0240420529275593,-0.220113584408457,-0.482364211033104,-0.164990696339003,0.514885564900681,1.91825611486768,0.612975632605893,-0.351231768838274,-0.086815664135224,-0.788939864790226,0.324100558667633,-0.0881268324752877,0.243098630093328,0.113454464034792,-0.679498131621524,0,0.120351066359459,0.214297657915009,-0.495214732574379,0,-0.0683483941997546,0,-0.0119458134548164,0.483603486106001,-0.224991716665677,-0.240884875359608,0,0.416062281080435,-0.430982054861922,0,-0.107251752939526,0,0.214297657915009,0.206781799577413,-0.147252965190297,0.0635710727965535,-0.138989456679195,0,-0.575782500474648,0.357148882912052,0.214297657915009,0.205477242805793,-0.0211783798493796,0.357148882912052,0.274041746803661,0.619927553782047,0.877873713632692,0.434471927887351,0,0,-0.288551455080673,0.26010621792122,0.214297657915009,0.749904854061214,0.169040989206692,0.575357484191483,0.575426896736938,0.30026444360403,0.309617159392615,0,0.550443001322285,0.0367698919498335,0,0.177135897372755,0,0,0.286885480233093,0,0,0.178574441456026,1.61479328234782,0,0,0,1.37959184118227,0,0,0,0,0.422816306925574,0.109628831502633,0,0.0204777077323517,0,0,0,0,0,0.0603836663563777,0,0,0.252130090520119,0,0.0912802422385889,0.107148828957504,0,0,0,0.569856258845855,-0.203236562094724,0.214297657915009,0.0824349514173774,0.357148882912052,0.107148828957504,0,0.622182279778733,-0.0861409897892114,0,0,0.107148828957504,0.107148828957504,0.299418425858388,0.43899592306809,0,0,0,1.02706544043627,0,0,0,0,-0.205985297459382,0,0.0911412383293589,0.214297657915009,0.016214016591238,-0.168569441089497,-0.0815818795468414,0.202509888580911,-2.06703461909513e-05,-0.217414339371637,0.046212577230782,0,0,0.422387071435611,0,0.162777142315417,-0.298308760510826,0,0.214297657915009,0.346303276857954,0,0,0,0,0.0267680715722561,0,1.20921888508896,0,0,0,0,0,0.214297657915009,0,0,0,0,0,0.231125377933502,0.122073601256499,0,0,0.214297657915009,0.904029557738468,0,0,0.214297657915009,-0.0241060230789031,0.286597134957508,0,0,0,0,0,0.214297657915009,0,0,0.396594377548812,0.107148828957504,0,0.868020317212054,0,0,0.999323044226041,0,0,0,0,0.976906307013276,0,0,-0.0630644742785049,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341143075683633,-0.0842573743103525,0,0,0,0,0,0,0,0.408900905019408,0,0,0,0,1.84795089543421,0,0,0,0.359665776929924,0,0.0539796278286231,0,0,0.464462161719081,0,0,0,0.178574441456026,0,0,0,0.357148882912052,0,0,0,0,0,0,0,0.178574441456026,0,0,-0.7099716592907,0,0.0699413669391424,-0.0188739779763412,0,0,0.355918345185457,0,0,0,0,0,0,0.0758084049289775,0,0,0,0,0,0,0,0.107148828957504,0,0,0,0,0,0,0,0,0,0,0.622182279778733,0,0,0,0,0,0,0.09546130605113,0,0,0,0,0,0,0,0.452485105054228,0,0,0.0151160191569785,0,0,0,0,0,0,-0.287976840656709,0.447510288312979,0.132509533283523,0,0.0157765508649721,0,0.256705567406911,0.214297657915009,0,0.0292416137325313,0,-0.0667773874189013,0,0,0,0.00204279860327461,0.21429765791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| |||
|rna_box=122 | |rna_box=122 | ||
|rna_catalog_number=SC1525 | |rna_catalog_number=SC1525 | ||
| Line 54: | Line 76: | ||
|rna_rin= | |rna_rin= | ||
|rna_sample_type=total RNA | |rna_sample_type=total RNA | ||
|rna_tube_id= | |rna_tube_id=1.22E+10 | ||
|rna_weight_ug=10 | |rna_weight_ug=10 | ||
|sample_age= | |sample_age= | ||
|sample_category=primary cells | |||
|sample_cell_catalog=N/A | |sample_cell_catalog=N/A | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 92: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;5.09558656572233e-251!GO:0043226;organelle;3.16523230611089e-213!GO:0043229;intracellular organelle;1.42268104107597e-212!GO:0043231;intracellular membrane-bound organelle;1.19968408657002e-210!GO:0043227;membrane-bound organelle;1.24576184176116e-210!GO:0005737;cytoplasm;1.34785276509029e-144!GO:0044422;organelle part;1.44973245979673e-133!GO:0044446;intracellular organelle part;3.96512219930702e-132!GO:0032991;macromolecular complex;6.11252969061323e-108!GO:0005634;nucleus;5.65770113293489e-107!GO:0044444;cytoplasmic part;1.59625419109398e-101!GO:0030529;ribonucleoprotein complex;2.17835358608766e-93!GO:0044237;cellular metabolic process;2.47340617389399e-84!GO:0043170;macromolecule metabolic process;2.78132821334429e-83!GO:0044238;primary metabolic process;3.54538080420978e-82!GO:0003723;RNA binding;2.36119248861335e-75!GO:0044428;nuclear part;4.63012522521278e-70!GO:0005515;protein binding;8.65209353034808e-67!GO:0043233;organelle lumen;4.26943810103318e-65!GO:0031974;membrane-enclosed lumen;4.26943810103318e-65!GO:0010467;gene expression;9.47060737660459e-64!GO:0016043;cellular component organization and biogenesis;6.35020067370269e-62!GO:0043283;biopolymer metabolic process;1.32226896126448e-61!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.32122791937449e-57!GO:0005739;mitochondrion;7.68331405882376e-56!GO:0005840;ribosome;4.12853169418111e-55!GO:0043234;protein complex;4.066641743762e-54!GO:0006396;RNA processing;1.90728568564594e-51!GO:0003735;structural constituent of ribosome;7.32877589035227e-49!GO:0006412;translation;9.73069115791379e-45!GO:0003676;nucleic acid binding;2.5827129531252e-44!GO:0031981;nuclear lumen;1.65664013092647e-42!GO:0033279;ribosomal subunit;5.08089796289799e-42!GO:0016071;mRNA metabolic process;1.37149459311982e-41!GO:0008380;RNA splicing;2.94914766223911e-41!GO:0031090;organelle membrane;4.44769612000222e-41!GO:0006996;organelle organization and biogenesis;7.9549540293766e-40!GO:0033036;macromolecule localization;2.70424578011636e-39!GO:0044429;mitochondrial part;3.14966279266861e-39!GO:0015031;protein transport;3.23212828828744e-38!GO:0006397;mRNA processing;2.07352967355345e-37!GO:0043228;non-membrane-bound organelle;5.62880273427883e-36!GO:0043232;intracellular non-membrane-bound organelle;5.62880273427883e-36!GO:0008104;protein localization;1.52458657487496e-35!GO:0016070;RNA metabolic process;2.06768804834002e-35!GO:0031967;organelle envelope;7.31705398929604e-35!GO:0031975;envelope;1.05475708262009e-34!GO:0045184;establishment of protein localization;1.49436125241309e-34!GO:0046907;intracellular transport;1.98247529882951e-32!GO:0019538;protein metabolic process;2.91582983062117e-31!GO:0065003;macromolecular complex assembly;3.76300105260301e-31!GO:0009059;macromolecule biosynthetic process;1.03475866906472e-30!GO:0022613;ribonucleoprotein complex biogenesis and assembly;2.13056962761367e-30!GO:0005829;cytosol;3.94299002409221e-30!GO:0006259;DNA metabolic process;4.8226686371163e-30!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.71470711669642e-29!GO:0044249;cellular biosynthetic process;2.11741756492239e-29!GO:0044267;cellular protein metabolic process;7.50918331039011e-29!GO:0044260;cellular macromolecule metabolic process;1.07946824015826e-28!GO:0005681;spliceosome;1.23404453170401e-28!GO:0009058;biosynthetic process;1.57453526773194e-28!GO:0022607;cellular component assembly;9.16588478402769e-28!GO:0006886;intracellular protein transport;2.95428865198529e-25!GO:0006119;oxidative phosphorylation;5.80648843055282e-25!GO:0005740;mitochondrial envelope;5.89794411771325e-25!GO:0019866;organelle inner membrane;8.17786086869639e-25!GO:0005654;nucleoplasm;8.47369689493738e-25!GO:0051649;establishment of cellular localization;3.38914250947685e-24!GO:0031966;mitochondrial membrane;6.55916741284101e-24!GO:0051641;cellular localization;9.17382468896518e-24!GO:0044445;cytosolic part;2.12370853622708e-23!GO:0005743;mitochondrial inner membrane;2.2188745330205e-22!GO:0044455;mitochondrial membrane part;2.50783322392954e-22!GO:0015934;large ribosomal subunit;1.53722968855053e-21!GO:0015935;small ribosomal subunit;1.60253257816221e-21!GO:0044451;nucleoplasm part;7.07639915542155e-21!GO:0005746;mitochondrial respiratory chain;3.04876970458693e-19!GO:0016462;pyrophosphatase activity;5.019098185438e-19!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;6.13049514878506e-19!GO:0017111;nucleoside-triphosphatase activity;8.56313697260691e-19!GO:0016817;hydrolase activity, acting on acid anhydrides;1.07935488207144e-18!GO:0022618;protein-RNA complex assembly;1.73053213867264e-18!GO:0005694;chromosome;3.20215124639378e-18!GO:0051276;chromosome organization and biogenesis;4.80138322703745e-18!GO:0050136;NADH dehydrogenase (quinone) activity;4.80138322703745e-18!GO:0003954;NADH dehydrogenase activity;4.80138322703745e-18!GO:0008137;NADH dehydrogenase (ubiquinone) activity;4.80138322703745e-18!GO:0007049;cell cycle;6.81962095683711e-18!GO:0000166;nucleotide binding;8.80964239291187e-18!GO:0006325;establishment and/or maintenance of chromatin architecture;1.10979022840757e-17!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.21413957167454e-17!GO:0005730;nucleolus;4.21504104382234e-17!GO:0006323;DNA packaging;7.27694880996664e-17!GO:0031980;mitochondrial lumen;8.18587868255607e-17!GO:0005759;mitochondrial matrix;8.18587868255607e-17!GO:0008135;translation factor activity, nucleic acid binding;2.93240381360012e-16!GO:0044427;chromosomal part;4.73537830745956e-16!GO:0030964;NADH dehydrogenase complex (quinone);6.54284590991204e-16!GO:0045271;respiratory chain complex I;6.54284590991204e-16!GO:0005747;mitochondrial respiratory chain complex I;6.54284590991204e-16!GO:0005761;mitochondrial ribosome;6.74600473251091e-16!GO:0000313;organellar ribosome;6.74600473251091e-16!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);8.70263466359832e-16!GO:0006512;ubiquitin cycle;1.00636900970282e-15!GO:0012505;endomembrane system;1.52189982367612e-15!GO:0042775;organelle ATP synthesis coupled electron transport;1.63677081294998e-15!GO:0042773;ATP synthesis coupled electron transport;1.63677081294998e-15!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;2.23987925201851e-15!GO:0006457;protein folding;2.37798346079302e-15!GO:0016874;ligase activity;1.35625599268403e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.66341431217919e-14!GO:0006974;response to DNA damage stimulus;1.98254500301085e-14!GO:0000398;nuclear mRNA splicing, via spliceosome;3.07893110882896e-14!GO:0000375;RNA splicing, via transesterification reactions;3.07893110882896e-14!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;3.07893110882896e-14!GO:0065004;protein-DNA complex assembly;4.29750960027275e-14!GO:0000502;proteasome complex (sensu Eukaryota);4.48304828239344e-14!GO:0006333;chromatin assembly or disassembly;5.8562003054056e-14!GO:0008134;transcription factor binding;7.12047396823294e-14!GO:0005794;Golgi apparatus;1.85373767740073e-13!GO:0003743;translation initiation factor activity;2.48090589220289e-13!GO:0050794;regulation of cellular process;3.58030464906955e-13!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;6.0016420133567e-13!GO:0022402;cell cycle process;7.68172920621581e-13!GO:0042254;ribosome biogenesis and assembly;1.34859184914108e-12!GO:0000785;chromatin;1.36085915630633e-12!GO:0019222;regulation of metabolic process;2.27282300940162e-12!GO:0006511;ubiquitin-dependent protein catabolic process;2.5793977486692e-12!GO:0051603;proteolysis involved in cellular protein catabolic process;3.00624806863377e-12!GO:0019941;modification-dependent protein catabolic process;3.35515809537496e-12!GO:0043632;modification-dependent macromolecule catabolic process;3.35515809537496e-12!GO:0006605;protein targeting;3.64717254099919e-12!GO:0044265;cellular macromolecule catabolic process;4.88248232755444e-12!GO:0006281;DNA repair;5.92150741898084e-12!GO:0006413;translational initiation;6.13659983684112e-12!GO:0006334;nucleosome assembly;6.54046139689735e-12!GO:0044257;cellular protein catabolic process;6.54046139689735e-12!GO:0051082;unfolded protein binding;8.01151556601395e-12!GO:0031965;nuclear membrane;8.77563879208118e-12!GO:0032553;ribonucleotide binding;9.54849819097964e-12!GO:0032555;purine ribonucleotide binding;9.54849819097964e-12!GO:0016192;vesicle-mediated transport;1.06794031017867e-11!GO:0050789;regulation of biological process;1.63269979652638e-11!GO:0048193;Golgi vesicle transport;2.24281324690214e-11!GO:0044453;nuclear membrane part;2.44703657051342e-11!GO:0048770;pigment granule;2.46715393072288e-11!GO:0042470;melanosome;2.46715393072288e-11!GO:0015630;microtubule cytoskeleton;2.99949772208766e-11!GO:0043285;biopolymer catabolic process;3.70137550953341e-11!GO:0000278;mitotic cell cycle;3.79628027856971e-11!GO:0031497;chromatin assembly;4.04017133369659e-11!GO:0051186;cofactor metabolic process;5.3691309103115e-11!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.0919073747308e-10!GO:0005635;nuclear envelope;1.40634131878945e-10!GO:0008565;protein transporter activity;2.38961559303927e-10!GO:0006350;transcription;2.69487194231687e-10!GO:0030163;protein catabolic process;3.47033632770704e-10!GO:0017076;purine nucleotide binding;3.93218599196643e-10!GO:0006260;DNA replication;4.22781541640963e-10!GO:0005643;nuclear pore;5.80711842508001e-10!GO:0042623;ATPase activity, coupled;8.38276360114418e-10!GO:0009057;macromolecule catabolic process;9.2661732703196e-10!GO:0043412;biopolymer modification;9.63636428611389e-10!GO:0016887;ATPase activity;1.1015464874844e-09!GO:0006446;regulation of translational initiation;1.24107131651716e-09!GO:0006913;nucleocytoplasmic transport;1.36115934808987e-09!GO:0016604;nuclear body;1.85481236551859e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.92662216360072e-09!GO:0031323;regulation of cellular metabolic process;2.47706352770821e-09!GO:0006732;coenzyme metabolic process;3.12370195273018e-09!GO:0051169;nuclear transport;3.53631898896641e-09!GO:0006366;transcription from RNA polymerase II promoter;3.92530258808788e-09!GO:0019829;cation-transporting ATPase activity;6.4393160655797e-09!GO:0009719;response to endogenous stimulus;6.51749965368893e-09!GO:0009259;ribonucleotide metabolic process;7.65004508562034e-09!GO:0006403;RNA localization;8.01598789136754e-09!GO:0032774;RNA biosynthetic process;9.44766968056627e-09!GO:0015986;ATP synthesis coupled proton transport;1.01856364000545e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.01856364000545e-08!GO:0006351;transcription, DNA-dependent;1.13364780260797e-08!GO:0050657;nucleic acid transport;1.24315529676557e-08!GO:0051236;establishment of RNA localization;1.24315529676557e-08!GO:0050658;RNA transport;1.24315529676557e-08!GO:0016607;nuclear speck;1.25228237687448e-08!GO:0008639;small protein conjugating enzyme activity;1.36789008143053e-08!GO:0030532;small nuclear ribonucleoprotein complex;1.40129779089826e-08!GO:0005524;ATP binding;1.43726428498143e-08!GO:0006464;protein modification process;1.48690083831645e-08!GO:0006364;rRNA processing;1.62449647245423e-08!GO:0006163;purine nucleotide metabolic process;1.63791461966157e-08!GO:0000087;M phase of mitotic cell cycle;1.74838082520131e-08!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.28925045532223e-08!GO:0010468;regulation of gene expression;2.28925045532223e-08!GO:0032559;adenyl ribonucleotide binding;2.29912684228423e-08!GO:0004842;ubiquitin-protein ligase activity;2.3184561364218e-08!GO:0009199;ribonucleoside triphosphate metabolic process;2.57167739386319e-08!GO:0007067;mitosis;2.57167739386319e-08!GO:0009150;purine ribonucleotide metabolic process;3.32372482479878e-08!GO:0016072;rRNA metabolic process;3.38679218417735e-08!GO:0009141;nucleoside triphosphate metabolic process;3.55740203463253e-08!GO:0005783;endoplasmic reticulum;3.8217386822097e-08!GO:0004386;helicase activity;3.8687590436365e-08!GO:0003712;transcription cofactor activity;4.35605945391923e-08!GO:0009142;nucleoside triphosphate biosynthetic process;4.56481448475891e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;4.56481448475891e-08!GO:0009205;purine ribonucleoside triphosphate metabolic process;4.68563308187023e-08!GO:0009144;purine nucleoside triphosphate metabolic process;4.68563308187023e-08!GO:0051301;cell division;4.75168924757554e-08!GO:0019787;small conjugating protein ligase activity;5.04966287596054e-08!GO:0051726;regulation of cell cycle;5.21453614725009e-08!GO:0006164;purine nucleotide biosynthetic process;6.06809405748956e-08!GO:0009055;electron carrier activity;6.15013412356957e-08!GO:0000074;regulation of progression through cell cycle;6.88477814937197e-08!GO:0009260;ribonucleotide biosynthetic process;7.17808808665921e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;8.58917972479135e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;8.58917972479135e-08!GO:0044248;cellular catabolic process;8.61497242346766e-08!GO:0022403;cell cycle phase;9.20496345387379e-08!GO:0009060;aerobic respiration;9.52043542895947e-08!GO:0043687;post-translational protein modification;1.02141782702956e-07!GO:0009152;purine ribonucleotide biosynthetic process;1.18669731268136e-07!GO:0008026;ATP-dependent helicase activity;1.20300934579199e-07!GO:0003924;GTPase activity;1.2309638482326e-07!GO:0006399;tRNA metabolic process;1.35571141539532e-07!GO:0046034;ATP metabolic process;1.4114420515304e-07!GO:0006754;ATP biosynthetic process;1.94757016881254e-07!GO:0006753;nucleoside phosphate metabolic process;1.94757016881254e-07!GO:0016568;chromatin modification;2.17949546568461e-07!GO:0065002;intracellular protein transport across a membrane;2.19941981124025e-07!GO:0015631;tubulin binding;2.4113194944013e-07!GO:0044432;endoplasmic reticulum part;2.45099903043869e-07!GO:0017038;protein import;2.9034562004991e-07!GO:0045333;cellular respiration;3.06453760659361e-07!GO:0046930;pore complex;3.16742821558855e-07!GO:0045449;regulation of transcription;3.38165487497986e-07!GO:0051028;mRNA transport;3.98240458118972e-07!GO:0016469;proton-transporting two-sector ATPase complex;4.85861240650142e-07!GO:0048523;negative regulation of cellular process;5.30196350536422e-07!GO:0044431;Golgi apparatus part;6.0815614899032e-07!GO:0005874;microtubule;6.93794634425943e-07!GO:0003677;DNA binding;7.25395821711288e-07!GO:0030554;adenyl nucleotide binding;7.28020186414597e-07!GO:0000786;nucleosome;7.80339030627586e-07!GO:0016879;ligase activity, forming carbon-nitrogen bonds;9.25104953190986e-07!GO:0007010;cytoskeleton organization and biogenesis;9.61165328350142e-07!GO:0045259;proton-transporting ATP synthase complex;1.0488854098059e-06!GO:0000245;spliceosome assembly;1.08395523458533e-06!GO:0006355;regulation of transcription, DNA-dependent;1.08634285800516e-06!GO:0016881;acid-amino acid ligase activity;1.17447438108994e-06!GO:0032446;protein modification by small protein conjugation;1.53829018022451e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.63145090850988e-06!GO:0031988;membrane-bound vesicle;1.73765793560529e-06!GO:0015078;hydrogen ion transmembrane transporter activity;1.77210732826154e-06!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.84307136587027e-06!GO:0004812;aminoacyl-tRNA ligase activity;1.84307136587027e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.84307136587027e-06!GO:0005762;mitochondrial large ribosomal subunit;2.08863658713938e-06!GO:0000315;organellar large ribosomal subunit;2.08863658713938e-06!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;2.21478176293568e-06!GO:0005667;transcription factor complex;2.94525604607592e-06!GO:0016023;cytoplasmic membrane-bound vesicle;2.97549757043782e-06!GO:0051188;cofactor biosynthetic process;3.00177232742312e-06!GO:0043566;structure-specific DNA binding;3.34984718531369e-06!GO:0016567;protein ubiquitination;3.85969159905732e-06!GO:0065007;biological regulation;4.33700976458768e-06!GO:0007017;microtubule-based process;4.45881253081271e-06!GO:0000279;M phase;4.84318230753143e-06!GO:0006099;tricarboxylic acid cycle;4.9389445878071e-06!GO:0046356;acetyl-CoA catabolic process;4.9389445878071e-06!GO:0005793;ER-Golgi intermediate compartment;5.16647378657056e-06!GO:0006752;group transfer coenzyme metabolic process;5.74876616889228e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;6.10147077243229e-06!GO:0006357;regulation of transcription from RNA polymerase II promoter;6.38281337451486e-06!GO:0043038;amino acid activation;6.60690726754763e-06!GO:0006418;tRNA aminoacylation for protein translation;6.60690726754763e-06!GO:0043039;tRNA aminoacylation;6.60690726754763e-06!GO:0003697;single-stranded DNA binding;6.84547877692813e-06!GO:0007005;mitochondrion organization and biogenesis;7.28632801072815e-06!GO:0006888;ER to Golgi vesicle-mediated transport;7.88394834467402e-06!GO:0005525;GTP binding;9.45962402133159e-06!GO:0005839;proteasome core complex (sensu Eukaryota);9.67715452463756e-06!GO:0048519;negative regulation of biological process;1.0124236612189e-05!GO:0031982;vesicle;1.02527509123237e-05!GO:0016363;nuclear matrix;1.09805309116677e-05!GO:0003729;mRNA binding;1.17005640316589e-05!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.27250314091792e-05!GO:0016564;transcription repressor activity;1.28021406921773e-05!GO:0006461;protein complex assembly;1.38359372513729e-05!GO:0006084;acetyl-CoA metabolic process;1.46797972092937e-05!GO:0043623;cellular protein complex assembly;1.54141833686863e-05!GO:0048475;coated membrane;1.58713423728875e-05!GO:0030117;membrane coat;1.58713423728875e-05!GO:0031410;cytoplasmic vesicle;1.77103481097232e-05!GO:0005768;endosome;1.82658711313082e-05!GO:0009108;coenzyme biosynthetic process;1.90233539994198e-05!GO:0005789;endoplasmic reticulum membrane;1.93267264431396e-05!GO:0000902;cell morphogenesis;2.78671003546387e-05!GO:0032989;cellular structure morphogenesis;2.78671003546387e-05!GO:0006793;phosphorus metabolic process;2.95499494645129e-05!GO:0006796;phosphate metabolic process;2.95499494645129e-05!GO:0000139;Golgi membrane;2.97152125832676e-05!GO:0006613;cotranslational protein targeting to membrane;3.44643563683469e-05!GO:0008017;microtubule binding;3.58218139012528e-05!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;3.8386473917467e-05!GO:0051427;hormone receptor binding;4.21703747647096e-05!GO:0009109;coenzyme catabolic process;4.29280860112322e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;5.18701730891408e-05!GO:0000314;organellar small ribosomal subunit;5.18916376893749e-05!GO:0005763;mitochondrial small ribosomal subunit;5.18916376893749e-05!GO:0003724;RNA helicase activity;5.20490615712295e-05!GO:0030120;vesicle coat;5.25481025262677e-05!GO:0030662;coated vesicle membrane;5.25481025262677e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;6.1321016754116e-05!GO:0004298;threonine endopeptidase activity;6.32961399463384e-05!GO:0051187;cofactor catabolic process;7.19933609423427e-05!GO:0006261;DNA-dependent DNA replication;7.28872356244409e-05!GO:0003899;DNA-directed RNA polymerase activity;7.46946738276555e-05!GO:0000226;microtubule cytoskeleton organization and biogenesis;7.56495861721881e-05!GO:0045045;secretory pathway;7.75145003645973e-05!GO:0031324;negative regulation of cellular metabolic process;8.71093549043037e-05!GO:0035257;nuclear hormone receptor binding;8.71238563245072e-05!GO:0003714;transcription corepressor activity;8.97190061777368e-05!GO:0019843;rRNA binding;8.98885806182315e-05!GO:0009892;negative regulation of metabolic process;8.98985127903635e-05!GO:0016310;phosphorylation;9.23146358046061e-05!GO:0032561;guanyl ribonucleotide binding;9.68538669754956e-05!GO:0019001;guanyl nucleotide binding;9.68538669754956e-05!GO:0045786;negative regulation of progression through cell cycle;0.000104252464191324!GO:0051170;nuclear import;0.000109225066037993!GO:0005905;coated pit;0.000114557506500969!GO:0031252;leading edge;0.000114557506500969!GO:0051246;regulation of protein metabolic process;0.000123680626584065!GO:0006606;protein import into nucleus;0.000124935987494868!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000127128979536285!GO:0043069;negative regulation of programmed cell death;0.000132786508492162!GO:0005813;centrosome;0.000143896429573805!GO:0006414;translational elongation;0.000153878552041308!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000160159493887182!GO:0008092;cytoskeletal protein binding;0.000162296474351294!GO:0043066;negative regulation of apoptosis;0.000165697639422916!GO:0051168;nuclear export;0.000173143454052254!GO:0006916;anti-apoptosis;0.000182853066997401!GO:0008361;regulation of cell size;0.000187098728039865!GO:0016049;cell growth;0.000205942046224959!GO:0005815;microtubule organizing center;0.000229516441588895!GO:0048471;perinuclear region of cytoplasm;0.000246865511250579!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000268611100764945!GO:0012501;programmed cell death;0.000314115359641497!GO:0043021;ribonucleoprotein binding;0.000316354771794163!GO:0008270;zinc ion binding;0.000316354771794163!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000338330584430504!GO:0005657;replication fork;0.000350693837128869!GO:0031124;mRNA 3'-end processing;0.000351680732905881!GO:0006915;apoptosis;0.000378438032032728!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000415296270336005!GO:0016126;sterol biosynthetic process;0.000419115204395861!GO:0003682;chromatin binding;0.000448225275868475!GO:0016481;negative regulation of transcription;0.000452563383946776!GO:0003713;transcription coactivator activity;0.000493411947362314!GO:0044452;nucleolar part;0.000538827184026291!GO:0005875;microtubule associated complex;0.000542398762481697!GO:0005770;late endosome;0.000542398762481697!GO:0005819;spindle;0.000548085600932769!GO:0000775;chromosome, pericentric region;0.000564126823301734!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000579085297900157!GO:0009117;nucleotide metabolic process;0.000580080751722315!GO:0000151;ubiquitin ligase complex;0.000598248970418802!GO:0016779;nucleotidyltransferase activity;0.000642860973154258!GO:0004576;oligosaccharyl transferase activity;0.000744905694358389!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00075775116319025!GO:0015399;primary active transmembrane transporter activity;0.00075775116319025!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.000814899682023039!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.000814899682023039!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.000814899682023039!GO:0044440;endosomal part;0.000829759274760255!GO:0010008;endosome membrane;0.000829759274760255!GO:0008186;RNA-dependent ATPase activity;0.00085561045232174!GO:0043681;protein import into mitochondrion;0.000859653375388395!GO:0008250;oligosaccharyl transferase complex;0.000872128391321453!GO:0051920;peroxiredoxin activity;0.000875341213507048!GO:0009056;catabolic process;0.000977162483256788!GO:0008219;cell death;0.000985712934411013!GO:0016265;death;0.000985712934411013!GO:0051128;regulation of cellular component organization and biogenesis;0.0011653414711216!GO:0005798;Golgi-associated vesicle;0.00119324141530736!GO:0001558;regulation of cell growth;0.00120106758238315!GO:0008654;phospholipid biosynthetic process;0.00122405670438011!GO:0051329;interphase of mitotic cell cycle;0.00138610535867071!GO:0003690;double-stranded DNA binding;0.00138670742923775!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00143522832321537!GO:0006695;cholesterol biosynthetic process;0.0014807099143741!GO:0006352;transcription initiation;0.00168592987220121!GO:0003684;damaged DNA binding;0.00199942083941116!GO:0050767;regulation of neurogenesis;0.00203117782787928!GO:0007399;nervous system development;0.00207482476642918!GO:0000059;protein import into nucleus, docking;0.00214726858033819!GO:0000776;kinetochore;0.00214726858033819!GO:0005769;early endosome;0.00216000219536813!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00232015169316192!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00232015169316192!GO:0031123;RNA 3'-end processing;0.00234747552532351!GO:0004004;ATP-dependent RNA helicase activity;0.00242179872748168!GO:0048500;signal recognition particle;0.00242179872748168!GO:0005637;nuclear inner membrane;0.00244267202952772!GO:0006612;protein targeting to membrane;0.00248364427358234!GO:0006626;protein targeting to mitochondrion;0.00257742232150258!GO:0008139;nuclear localization sequence binding;0.00260581889639267!GO:0051087;chaperone binding;0.00260581889639267!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00268604857340885!GO:0016853;isomerase activity;0.00268910384476868!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00279194610119539!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.00282857104836187!GO:0006383;transcription from RNA polymerase III promoter;0.00295027245131069!GO:0051325;interphase;0.00301920665450644!GO:0005048;signal sequence binding;0.00302770115866935!GO:0006891;intra-Golgi vesicle-mediated transport;0.00308516157438095!GO:0005885;Arp2/3 protein complex;0.00320519745369401!GO:0006818;hydrogen transport;0.00331457604527761!GO:0005869;dynactin complex;0.00332382452511244!GO:0045454;cell redox homeostasis;0.00336443557001587!GO:0016044;membrane organization and biogenesis;0.003392693337267!GO:0031072;heat shock protein binding;0.00340700484280876!GO:0008287;protein serine/threonine phosphatase complex;0.00349604737477914!GO:0006595;polyamine metabolic process;0.00356977063663227!GO:0048468;cell development;0.00357356626722657!GO:0015992;proton transport;0.00366064028081412!GO:0048487;beta-tubulin binding;0.00368037236023758!GO:0030027;lamellipodium;0.00378444531367767!GO:0006378;mRNA polyadenylation;0.00391439261515046!GO:0007051;spindle organization and biogenesis;0.00393990824355909!GO:0016272;prefoldin complex;0.00402198586467158!GO:0016251;general RNA polymerase II transcription factor activity;0.00412655167583398!GO:0007006;mitochondrial membrane organization and biogenesis;0.00431152804606762!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00440107008608714!GO:0003746;translation elongation factor activity;0.00464035981446303!GO:0051789;response to protein stimulus;0.00470369046461259!GO:0006986;response to unfolded protein;0.00470369046461259!GO:0018196;peptidyl-asparagine modification;0.00475180195746279!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00475180195746279!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00507027142841004!GO:0030118;clathrin coat;0.00519302635482717!GO:0005684;U2-dependent spliceosome;0.00527737222870608!GO:0033116;ER-Golgi intermediate compartment membrane;0.00536532658886163!GO:0008312;7S RNA binding;0.00542347378185005!GO:0016563;transcription activator activity;0.00557137182944913!GO:0008180;signalosome;0.00559287870183749!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.00575660157057836!GO:0019899;enzyme binding;0.00580197751446823!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00582859848779672!GO:0045047;protein targeting to ER;0.00582859848779672!GO:0006402;mRNA catabolic process;0.0060440439095165!GO:0006839;mitochondrial transport;0.00606922249186244!GO:0006302;double-strand break repair;0.00615781620174647!GO:0016197;endosome transport;0.00663109499446328!GO:0030182;neuron differentiation;0.00666062633917346!GO:0016859;cis-trans isomerase activity;0.00667621409567994!GO:0005788;endoplasmic reticulum lumen;0.00669804236453994!GO:0016740;transferase activity;0.00697891433637548!GO:0030036;actin cytoskeleton organization and biogenesis;0.00702875484214489!GO:0032940;secretion by cell;0.00706010061271773!GO:0019887;protein kinase regulator activity;0.00720720810307052!GO:0006405;RNA export from nucleus;0.00720720810307052!GO:0008033;tRNA processing;0.00744219906300725!GO:0015980;energy derivation by oxidation of organic compounds;0.00746330622141071!GO:0045892;negative regulation of transcription, DNA-dependent;0.00779857836593061!GO:0030880;RNA polymerase complex;0.00806960564173401!GO:0008094;DNA-dependent ATPase activity;0.00836599216771714!GO:0022008;neurogenesis;0.00843055798461137!GO:0016584;nucleosome positioning;0.00863558185967012!GO:0005741;mitochondrial outer membrane;0.00885142671907907!GO:0030427;site of polarized growth;0.00920317925950664!GO:0046914;transition metal ion binding;0.00935355180611767!GO:0030176;integral to endoplasmic reticulum membrane;0.00939864065787379!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00969291139638416!GO:0008320;protein transmembrane transporter activity;0.00990894510737069!GO:0030867;rough endoplasmic reticulum membrane;0.00993535624859925!GO:0048699;generation of neurons;0.0100463949760697!GO:0030521;androgen receptor signaling pathway;0.0102588948030998!GO:0031968;organelle outer membrane;0.0107035331966009!GO:0051252;regulation of RNA metabolic process;0.0110080165653488!GO:0043492;ATPase activity, coupled to movement of substances;0.0111483059682144!GO:0006338;chromatin remodeling;0.0111742581397526!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0113287160768558!GO:0009165;nucleotide biosynthetic process;0.011415225975538!GO:0005832;chaperonin-containing T-complex;0.0115683529879727!GO:0007021;tubulin folding;0.0115943587711759!GO:0000339;RNA cap binding;0.0117497152975188!GO:0031901;early endosome membrane;0.0119332034424563!GO:0051539;4 iron, 4 sulfur cluster binding;0.0120042482729006!GO:0000159;protein phosphatase type 2A complex;0.0121486803186294!GO:0040008;regulation of growth;0.0123113456066504!GO:0019207;kinase regulator activity;0.0124851809272852!GO:0003711;transcription elongation regulator activity;0.0125836798886534!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0126781204553465!GO:0015002;heme-copper terminal oxidase activity;0.0126781204553465!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0126781204553465!GO:0004129;cytochrome-c oxidase activity;0.0126781204553465!GO:0000049;tRNA binding;0.0128550563759414!GO:0043624;cellular protein complex disassembly;0.0129257283318477!GO:0030426;growth cone;0.013049360618724!GO:0046474;glycerophospholipid biosynthetic process;0.0131645600587091!GO:0005876;spindle microtubule;0.0132090306016532!GO:0040029;regulation of gene expression, epigenetic;0.0133196912374452!GO:0043488;regulation of mRNA stability;0.0133239582768031!GO:0043487;regulation of RNA stability;0.0133239582768031!GO:0042585;germinal vesicle;0.013343373471135!GO:0019867;outer membrane;0.0134136584020825!GO:0030137;COPI-coated vesicle;0.0137246502034882!GO:0005853;eukaryotic translation elongation factor 1 complex;0.0144533639634747!GO:0001726;ruffle;0.0145845660988118!GO:0051052;regulation of DNA metabolic process;0.0157672944349057!GO:0009116;nucleoside metabolic process;0.0162150688805987!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0163347198509073!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0168083154991216!GO:0000428;DNA-directed RNA polymerase complex;0.0168083154991216!GO:0006650;glycerophospholipid metabolic process;0.0168785585001875!GO:0016585;chromatin remodeling complex;0.0174222624659174!GO:0008022;protein C-terminus binding;0.0174777717630253!GO:0000082;G1/S transition of mitotic cell cycle;0.0184323346113176!GO:0007052;mitotic spindle organization and biogenesis;0.0184582655297315!GO:0000792;heterochromatin;0.0185630223919175!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0187792962863679!GO:0006401;RNA catabolic process;0.0190746605399859!GO:0050770;regulation of axonogenesis;0.0193005392942!GO:0007264;small GTPase mediated signal transduction;0.0193634437799011!GO:0006611;protein export from nucleus;0.019383618798819!GO:0007019;microtubule depolymerization;0.0196802616699385!GO:0035258;steroid hormone receptor binding;0.0197901379610269!GO:0042981;regulation of apoptosis;0.0198122691074715!GO:0043022;ribosome binding;0.0199706601086465!GO:0030384;phosphoinositide metabolic process;0.0202628146037471!GO:0032508;DNA duplex unwinding;0.0212980298140301!GO:0032392;DNA geometric change;0.0212980298140301!GO:0051540;metal cluster binding;0.0218804893611256!GO:0051536;iron-sulfur cluster binding;0.0218804893611256!GO:0006607;NLS-bearing substrate import into nucleus;0.0219464933938343!GO:0031111;negative regulation of microtubule polymerization or depolymerization;0.0220612145151653!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0221319006918258!GO:0043067;regulation of programmed cell death;0.0221319006918258!GO:0030663;COPI coated vesicle membrane;0.0224357827664179!GO:0030126;COPI vesicle coat;0.0224357827664179!GO:0032984;macromolecular complex disassembly;0.0227632484531644!GO:0046467;membrane lipid biosynthetic process;0.0228088046306683!GO:0006376;mRNA splice site selection;0.0228088046306683!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0228088046306683!GO:0000209;protein polyubiquitination;0.0228844759177519!GO:0030320;cellular monovalent inorganic anion homeostasis;0.0228844759177519!GO:0055083;monovalent inorganic anion homeostasis;0.0228844759177519!GO:0055064;chloride ion homeostasis;0.0228844759177519!GO:0030644;cellular chloride ion homeostasis;0.0228844759177519!GO:0008601;protein phosphatase type 2A regulator activity;0.0229419422745272!GO:0022884;macromolecule transmembrane transporter activity;0.0229597282135782!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0229597282135782!GO:0022890;inorganic cation transmembrane transporter activity;0.0239685574082095!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0242167225351115!GO:0003678;DNA helicase activity;0.025316127705295!GO:0031902;late endosome membrane;0.0258179573868044!GO:0031371;ubiquitin conjugating enzyme complex;0.0258951423350815!GO:0030133;transport vesicle;0.0261962633634226!GO:0004448;isocitrate dehydrogenase activity;0.0269189737590403!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0282592110653953!GO:0010257;NADH dehydrogenase complex assembly;0.0282592110653953!GO:0033108;mitochondrial respiratory chain complex assembly;0.0282592110653953!GO:0043631;RNA polyadenylation;0.0287211456267601!GO:0000096;sulfur amino acid metabolic process;0.0288535848087076!GO:0000904;cellular morphogenesis during differentiation;0.029049106317943!GO:0030658;transport vesicle membrane;0.0294438052572222!GO:0000118;histone deacetylase complex;0.0307377032388657!GO:0000075;cell cycle checkpoint;0.0317504801247029!GO:0031529;ruffle organization and biogenesis;0.0322157434153657!GO:0046489;phosphoinositide biosynthetic process;0.0323975426587893!GO:0031109;microtubule polymerization or depolymerization;0.0328029174118367!GO:0007050;cell cycle arrest;0.0328029174118367!GO:0006356;regulation of transcription from RNA polymerase I promoter;0.0328501380848212!GO:0006360;transcription from RNA polymerase I promoter;0.0331938442780283!GO:0005758;mitochondrial intermembrane space;0.0335708107503216!GO:0005652;nuclear lamina;0.0337432431879911!GO:0030496;midbody;0.0339577273841826!GO:0043241;protein complex disassembly;0.0347613365725999!GO:0030029;actin filament-based process;0.0352395998272352!GO:0005669;transcription factor TFIID complex;0.0352395998272352!GO:0046128;purine ribonucleoside metabolic process;0.0355634927570897!GO:0042278;purine nucleoside metabolic process;0.0355634927570897!GO:0043284;biopolymer biosynthetic process;0.0357326480094766!GO:0012506;vesicle membrane;0.0358368001652172!GO:0032259;methylation;0.0362202429314997!GO:0044433;cytoplasmic vesicle part;0.0363272880467077!GO:0008286;insulin receptor signaling pathway;0.0366142234836427!GO:0003702;RNA polymerase II transcription factor activity;0.0374835909155255!GO:0003730;mRNA 3'-UTR binding;0.0382911295429115!GO:0005791;rough endoplasmic reticulum;0.0385893844241518!GO:0031970;organelle envelope lumen;0.0388986829587738!GO:0005521;lamin binding;0.0391336999907384!GO:0050769;positive regulation of neurogenesis;0.0396485487396908!GO:0051129;negative regulation of cellular component organization and biogenesis;0.0397999495159484!GO:0005784;translocon complex;0.0399230065638956!GO:0005881;cytoplasmic microtubule;0.0403161849916535!GO:0030132;clathrin coat of coated pit;0.0403161849916535!GO:0019208;phosphatase regulator activity;0.0404050142542766!GO:0030508;thiol-disulfide exchange intermediate activity;0.0406532794257701!GO:0004860;protein kinase inhibitor activity;0.0415128001415134!GO:0006268;DNA unwinding during replication;0.0416153447733399!GO:0030911;TPR domain binding;0.041862850153166!GO:0031301;integral to organelle membrane;0.0420314496586602!GO:0048667;neuron morphogenesis during differentiation;0.0424642012907774!GO:0048812;neurite morphogenesis;0.0424642012907774!GO:0006310;DNA recombination;0.0429066127552223!GO:0030660;Golgi-associated vesicle membrane;0.0432143249641984!GO:0006284;base-excision repair;0.0433433109569243!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0435238823357564!GO:0043414;biopolymer methylation;0.0435238823357564!GO:0016741;transferase activity, transferring one-carbon groups;0.0437267514953913!GO:0050811;GABA receptor binding;0.0455322152767152!GO:0006367;transcription initiation from RNA polymerase II promoter;0.045663846101847!GO:0050178;phenylpyruvate tautomerase activity;0.0457137863652319!GO:0008154;actin polymerization and/or depolymerization;0.0459229516355626!GO:0045893;positive regulation of transcription, DNA-dependent;0.0465946541075728!GO:0050772;positive regulation of axonogenesis;0.0471517865814935!GO:0030518;steroid hormone receptor signaling pathway;0.0474823423595094!GO:0030516;regulation of axon extension;0.0486365750394152!GO:0030030;cell projection organization and biogenesis;0.0487631707268929!GO:0048858;cell projection morphogenesis;0.0487631707268929!GO:0032990;cell part morphogenesis;0.0487631707268929 | |||
|sample_id=11655 | |sample_id=11655 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 100: | ||
|sample_tissue=brain | |sample_tissue=brain | ||
|top_motifs=T:3.35109179184;SOX2:3.27436579026;NKX2-3_NKX2-5:2.802188673;FOXM1:2.78546424071;NKX6-1,2:2.75418491612;ZNF384:2.57110932365;FOXD3:2.4942848772;OCT4_SOX2{dimer}:2.44528117691;PAX4:2.44372244336;IKZF2:2.43429698648;TFDP1:2.40495369378;CDC5L:2.29773618541;MZF1:2.22568746676;POU1F1:2.21462409124;LHX3,4:2.2117967127;POU5F1:2.18171526065;EVI1:2.10515901163;POU6F1:2.10226954128;PRRX1,2:2.0913250774;SOX{8,9,10}:2.08166137862;JUN:1.96407771109;GFI1:1.91961389705;CDX1,2,4:1.85209139065;GATA4:1.82780200778;EGR1..3:1.73091402716;BREu{core}:1.69422216463;NKX3-1:1.67433189143;RBPJ:1.67045491205;MED-1{core}:1.64516022886;ADNP_IRX_SIX_ZHX:1.64261158702;SOX17:1.5435439479;MTE{core}:1.51180210205;FOXP1:1.50962675088;PAX8:1.46060852732;NR1H4:1.4341409505;ONECUT1,2:1.43228388256;STAT1,3:1.42387714922;YY1:1.41613553426;ARID5B:1.38615261072;ATF4:1.36654045814;REST:1.36108451118;RFX1:1.31810218025;AHR_ARNT_ARNT2:1.28834449247;ZIC1..3:1.2688095609;ZFP161:1.25327183597;PRDM1:1.24744621611;UFEwm:1.24386111182;NRF1:1.21347740935;ELK1,4_GABP{A,B1}:1.19279137355;FOXQ1:1.15908868736;POU2F1..3:1.1488968199;SMAD1..7,9:1.13927638603;FOXL1:1.10749027841;ZBTB6:1.05096103851;HOX{A4,D4}:1.01094670942;PAX5:0.97520896236;POU3F1..4:0.969312367071;RREB1:0.958345263002;TFAP2B:0.95783547139;HMGA1,2:0.955856540892;LEF1_TCF7_TCF7L1,2:0.929688056885;KLF4:0.901441792294;NANOG:0.896741475852;CREB1:0.844458963958;ZNF143:0.842928778466;GFI1B:0.839445547151;ALX1:0.824331686518;PATZ1:0.800308767769;GTF2I:0.740261360052;CUX2:0.731587863188;GCM1,2:0.720595007494;ATF2:0.716600558033;NFY{A,B,C}:0.693167054722;HIC1:0.671540570038;E2F1..5:0.65402252496;MAZ:0.634523844269;NHLH1,2:0.631154567215;RFX2..5_RFXANK_RFXAP:0.623370202869;DBP:0.605698672408;PITX1..3:0.586286027258;PBX1:0.58289749691;TBP:0.56731602777;PAX1,9:0.558845949294;MYFfamily:0.556162419091;ZBTB16:0.535504709462;NFE2L1:0.530439692593;ZNF423:0.466832482245;TOPORS:0.461394117033;FOXP3:0.444273319767;GZF1:0.415427399581;TEF:0.360186632335;LMO2:0.349809807202;BPTF:0.345347991756;VSX1,2:0.331148373107;PAX6:0.245292727875;HOXA9_MEIS1:0.241560597899;PPARG:0.230635947933;MTF1:0.217916788877;NKX2-2,8:0.210617285084;NR6A1:0.209009261262;STAT2,4,6:0.202113844366;SOX5:0.201152929698;PDX1:0.175089102548;MAFB:0.158768912802;GTF2A1,2:0.143366756553;TGIF1:0.120683903522;XCPE1{core}:0.0895085172339;SPZ1:0.0804139773881;FOXN1:0.0723269260251;ATF5_CREB3:0.0390346224976;HOX{A5,B5}:-0.0352758395573;AIRE:-0.0523515659108;MYB:-0.0565437897865;SRF:-0.0925799524641;TLX1..3_NFIC{dimer}:-0.126861766186;PAX3,7:-0.189897291311;STAT5{A,B}:-0.235422609519;MEF2{A,B,C,D}:-0.242250898669;HNF4A_NR2F1,2:-0.261588516585;ESRRA:-0.265305986942;HNF1A:-0.272357195336;HAND1,2:-0.280308411885;FOS_FOS{B,L1}_JUN{B,D}:-0.308243252555;HBP1_HMGB_SSRP1_UBTF:-0.355126975005;ATF6:-0.362211810268;MYBL2:-0.39025168456;NFE2L2:-0.390531195748;MYOD1:-0.402698443635;HMX1:-0.414875341477;NKX2-1,4:-0.422361782328;NR3C1:-0.432174205163;ALX4:-0.448786909682;BACH2:-0.450841361868;NKX3-2:-0.452933766906;HSF1,2:-0.461815656189;CEBPA,B_DDIT3:-0.521692453626;NANOG{mouse}:-0.537897881608;RUNX1..3:-0.5720227065;AR:-0.60508396106;SNAI1..3:-0.606870082841;NFKB1_REL_RELA:-0.610718768838;DMAP1_NCOR{1,2}_SMARC:-0.610866503561;XBP1:-0.640425610702;SPIB:-0.647453373515;TLX2:-0.670239310179;SPI1:-0.674892765977;PAX2:-0.692181894972;TEAD1:-0.694619750402;NFE2:-0.69753982963;TP53:-0.742597808485;GATA6:-0.748527426699;NFATC1..3:-0.777040379898;FOSL2:-0.810876727938;CRX:-0.812998272033;SP1:-0.836293463151;ZEB1:-0.836436743968;FOX{D1,D2}:-0.890508612288;EP300:-0.903590063791;SREBF1,2:-0.924235602222;HOX{A6,A7,B6,B7}:-0.926816650626;IRF1,2:-0.930704128742;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.938232330777;IRF7:-0.940832977461;TFAP4:-0.987968656742;HLF:-0.992382370058;IKZF1:-0.997954281794;NFIL3:-1.00593808362;FOX{I1,J2}:-1.0405380163;NFIX:-1.04662500657;TFCP2:-1.06109755473;EN1,2:-1.07214908999;RORA:-1.07837077544;HES1:-1.12446840025;RXR{A,B,G}:-1.14200877103;TAL1_TCF{3,4,12}:-1.14279182484;FOX{F1,F2,J1}:-1.193526069;TFAP2{A,C}:-1.2490303676;EBF1:-1.25520382051;FOXO1,3,4:-1.26605471992;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.27340295974;FOXA2:-1.29350730253;GLI1..3:-1.31194778287;ELF1,2,4:-1.32059009034;ESR1:-1.32535900471;bHLH_family:-1.3750526065;NR5A1,2:-1.44457165711;RXRA_VDR{dimer}:-1.4636396062;ETS1,2:-1.53244259282;TBX4,5:-1.54416310926;ZNF148:-1.65359088972;ZNF238:-1.87682045876;HIF1A:-1.90095461953 | |top_motifs=T:3.35109179184;SOX2:3.27436579026;NKX2-3_NKX2-5:2.802188673;FOXM1:2.78546424071;NKX6-1,2:2.75418491612;ZNF384:2.57110932365;FOXD3:2.4942848772;OCT4_SOX2{dimer}:2.44528117691;PAX4:2.44372244336;IKZF2:2.43429698648;TFDP1:2.40495369378;CDC5L:2.29773618541;MZF1:2.22568746676;POU1F1:2.21462409124;LHX3,4:2.2117967127;POU5F1:2.18171526065;EVI1:2.10515901163;POU6F1:2.10226954128;PRRX1,2:2.0913250774;SOX{8,9,10}:2.08166137862;JUN:1.96407771109;GFI1:1.91961389705;CDX1,2,4:1.85209139065;GATA4:1.82780200778;EGR1..3:1.73091402716;BREu{core}:1.69422216463;NKX3-1:1.67433189143;RBPJ:1.67045491205;MED-1{core}:1.64516022886;ADNP_IRX_SIX_ZHX:1.64261158702;SOX17:1.5435439479;MTE{core}:1.51180210205;FOXP1:1.50962675088;PAX8:1.46060852732;NR1H4:1.4341409505;ONECUT1,2:1.43228388256;STAT1,3:1.42387714922;YY1:1.41613553426;ARID5B:1.38615261072;ATF4:1.36654045814;REST:1.36108451118;RFX1:1.31810218025;AHR_ARNT_ARNT2:1.28834449247;ZIC1..3:1.2688095609;ZFP161:1.25327183597;PRDM1:1.24744621611;UFEwm:1.24386111182;NRF1:1.21347740935;ELK1,4_GABP{A,B1}:1.19279137355;FOXQ1:1.15908868736;POU2F1..3:1.1488968199;SMAD1..7,9:1.13927638603;FOXL1:1.10749027841;ZBTB6:1.05096103851;HOX{A4,D4}:1.01094670942;PAX5:0.97520896236;POU3F1..4:0.969312367071;RREB1:0.958345263002;TFAP2B:0.95783547139;HMGA1,2:0.955856540892;LEF1_TCF7_TCF7L1,2:0.929688056885;KLF4:0.901441792294;NANOG:0.896741475852;CREB1:0.844458963958;ZNF143:0.842928778466;GFI1B:0.839445547151;ALX1:0.824331686518;PATZ1:0.800308767769;GTF2I:0.740261360052;CUX2:0.731587863188;GCM1,2:0.720595007494;ATF2:0.716600558033;NFY{A,B,C}:0.693167054722;HIC1:0.671540570038;E2F1..5:0.65402252496;MAZ:0.634523844269;NHLH1,2:0.631154567215;RFX2..5_RFXANK_RFXAP:0.623370202869;DBP:0.605698672408;PITX1..3:0.586286027258;PBX1:0.58289749691;TBP:0.56731602777;PAX1,9:0.558845949294;MYFfamily:0.556162419091;ZBTB16:0.535504709462;NFE2L1:0.530439692593;ZNF423:0.466832482245;TOPORS:0.461394117033;FOXP3:0.444273319767;GZF1:0.415427399581;TEF:0.360186632335;LMO2:0.349809807202;BPTF:0.345347991756;VSX1,2:0.331148373107;PAX6:0.245292727875;HOXA9_MEIS1:0.241560597899;PPARG:0.230635947933;MTF1:0.217916788877;NKX2-2,8:0.210617285084;NR6A1:0.209009261262;STAT2,4,6:0.202113844366;SOX5:0.201152929698;PDX1:0.175089102548;MAFB:0.158768912802;GTF2A1,2:0.143366756553;TGIF1:0.120683903522;XCPE1{core}:0.0895085172339;SPZ1:0.0804139773881;FOXN1:0.0723269260251;ATF5_CREB3:0.0390346224976;HOX{A5,B5}:-0.0352758395573;AIRE:-0.0523515659108;MYB:-0.0565437897865;SRF:-0.0925799524641;TLX1..3_NFIC{dimer}:-0.126861766186;PAX3,7:-0.189897291311;STAT5{A,B}:-0.235422609519;MEF2{A,B,C,D}:-0.242250898669;HNF4A_NR2F1,2:-0.261588516585;ESRRA:-0.265305986942;HNF1A:-0.272357195336;HAND1,2:-0.280308411885;FOS_FOS{B,L1}_JUN{B,D}:-0.308243252555;HBP1_HMGB_SSRP1_UBTF:-0.355126975005;ATF6:-0.362211810268;MYBL2:-0.39025168456;NFE2L2:-0.390531195748;MYOD1:-0.402698443635;HMX1:-0.414875341477;NKX2-1,4:-0.422361782328;NR3C1:-0.432174205163;ALX4:-0.448786909682;BACH2:-0.450841361868;NKX3-2:-0.452933766906;HSF1,2:-0.461815656189;CEBPA,B_DDIT3:-0.521692453626;NANOG{mouse}:-0.537897881608;RUNX1..3:-0.5720227065;AR:-0.60508396106;SNAI1..3:-0.606870082841;NFKB1_REL_RELA:-0.610718768838;DMAP1_NCOR{1,2}_SMARC:-0.610866503561;XBP1:-0.640425610702;SPIB:-0.647453373515;TLX2:-0.670239310179;SPI1:-0.674892765977;PAX2:-0.692181894972;TEAD1:-0.694619750402;NFE2:-0.69753982963;TP53:-0.742597808485;GATA6:-0.748527426699;NFATC1..3:-0.777040379898;FOSL2:-0.810876727938;CRX:-0.812998272033;SP1:-0.836293463151;ZEB1:-0.836436743968;FOX{D1,D2}:-0.890508612288;EP300:-0.903590063791;SREBF1,2:-0.924235602222;HOX{A6,A7,B6,B7}:-0.926816650626;IRF1,2:-0.930704128742;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.938232330777;IRF7:-0.940832977461;TFAP4:-0.987968656742;HLF:-0.992382370058;IKZF1:-0.997954281794;NFIL3:-1.00593808362;FOX{I1,J2}:-1.0405380163;NFIX:-1.04662500657;TFCP2:-1.06109755473;EN1,2:-1.07214908999;RORA:-1.07837077544;HES1:-1.12446840025;RXR{A,B,G}:-1.14200877103;TAL1_TCF{3,4,12}:-1.14279182484;FOX{F1,F2,J1}:-1.193526069;TFAP2{A,C}:-1.2490303676;EBF1:-1.25520382051;FOXO1,3,4:-1.26605471992;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.27340295974;FOXA2:-1.29350730253;GLI1..3:-1.31194778287;ELF1,2,4:-1.32059009034;ESR1:-1.32535900471;bHLH_family:-1.3750526065;NR5A1,2:-1.44457165711;RXRA_VDR{dimer}:-1.4636396062;ETS1,2:-1.53244259282;TBX4,5:-1.54416310926;ZNF148:-1.65359088972;ZNF238:-1.87682045876;HIF1A:-1.90095461953 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11655-122E8;search_select_hide=table117:FF:11655-122E8 | |||
}} | }} | ||
Latest revision as of 18:13, 4 June 2020
| Name: | Neurons, donor3 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs13815 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13815
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13815
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.208 |
| 10 | 10 | 0.279 |
| 100 | 100 | 0.938 |
| 101 | 101 | 0.907 |
| 102 | 102 | 0.861 |
| 103 | 103 | 0.0549 |
| 104 | 104 | 0.162 |
| 105 | 105 | 0.0566 |
| 106 | 106 | 0.0209 |
| 107 | 107 | 0.158 |
| 108 | 108 | 0.933 |
| 109 | 109 | 0.00293 |
| 11 | 11 | 0.0812 |
| 110 | 110 | 0.157 |
| 111 | 111 | 0.913 |
| 112 | 112 | 0.276 |
| 113 | 113 | 0.79 |
| 114 | 114 | 0.0625 |
| 115 | 115 | 0.203 |
| 116 | 116 | 0.944 |
| 117 | 117 | 0.0655 |
| 118 | 118 | 0.399 |
| 119 | 119 | 0.326 |
| 12 | 12 | 0.505 |
| 120 | 120 | 0.645 |
| 121 | 121 | 0.203 |
| 122 | 122 | 0.245 |
| 123 | 123 | 0.201 |
| 124 | 124 | 0.837 |
| 125 | 125 | 0.22 |
| 126 | 126 | 0.00842 |
| 127 | 127 | 0.332 |
| 128 | 128 | 0.114 |
| 129 | 129 | 0.347 |
| 13 | 13 | 0.0193 |
| 130 | 130 | 0.261 |
| 131 | 131 | 0.466 |
| 132 | 132 | 0.898 |
| 133 | 133 | 0.532 |
| 134 | 134 | 0.748 |
| 135 | 135 | 0.537 |
| 136 | 136 | 0.0364 |
| 137 | 137 | 0.265 |
| 138 | 138 | 0.48 |
| 139 | 139 | 0.0537 |
| 14 | 14 | 0.77 |
| 140 | 140 | 0.868 |
| 141 | 141 | 0.467 |
| 142 | 142 | 0.786 |
| 143 | 143 | 0.103 |
| 144 | 144 | 0.793 |
| 145 | 145 | 0.482 |
| 146 | 146 | 0.191 |
| 147 | 147 | 0.959 |
| 148 | 148 | 0.22 |
| 149 | 149 | 0.198 |
| 15 | 15 | 0.0707 |
| 150 | 150 | 0.5 |
| 151 | 151 | 0.332 |
| 152 | 152 | 0.082 |
| 153 | 153 | 0.938 |
| 154 | 154 | 0.61 |
| 155 | 155 | 0.824 |
| 156 | 156 | 0.636 |
| 157 | 157 | 0.346 |
| 158 | 158 | 0.943 |
| 159 | 159 | 0.424 |
| 16 | 16 | 0.143 |
| 160 | 160 | 0.172 |
| 161 | 161 | 0.16 |
| 162 | 162 | 0.745 |
| 163 | 163 | 0.39 |
| 164 | 164 | 0.0843 |
| 165 | 165 | 0.393 |
| 166 | 166 | 0.334 |
| 167 | 167 | 0.358 |
| 168 | 168 | 0.0989 |
| 169 | 169 | 0.014 |
| 17 | 17 | 0.106 |
| 18 | 18 | 0.198 |
| 19 | 19 | 0.23 |
| 2 | 2 | 0.267 |
| 20 | 20 | 0.94 |
| 21 | 21 | 0.41 |
| 22 | 22 | 0.0757 |
| 23 | 23 | 0.0226 |
| 24 | 24 | 0.0586 |
| 25 | 25 | 0.55 |
| 26 | 26 | 0.153 |
| 27 | 27 | 0.33 |
| 28 | 28 | 0.783 |
| 29 | 29 | 0.169 |
| 3 | 3 | 0.114 |
| 30 | 30 | 0.402 |
| 31 | 31 | 0.916 |
| 32 | 32 | 0.0594 |
| 33 | 33 | 0.238 |
| 34 | 34 | 0.279 |
| 35 | 35 | 0.557 |
| 36 | 36 | 0.302 |
| 37 | 37 | 0.0783 |
| 38 | 38 | 0.165 |
| 39 | 39 | 0.305 |
| 4 | 4 | 0.869 |
| 40 | 40 | 0.0573 |
| 41 | 41 | 0.221 |
| 42 | 42 | 0.298 |
| 43 | 43 | 0.126 |
| 44 | 44 | 0.724 |
| 45 | 45 | 0.375 |
| 46 | 46 | 0.287 |
| 47 | 47 | 0.196 |
| 48 | 48 | 0.174 |
| 49 | 49 | 0.232 |
| 5 | 5 | 0.153 |
| 50 | 50 | 0.228 |
| 51 | 51 | 0.396 |
| 52 | 52 | 0.276 |
| 53 | 53 | 0.693 |
| 54 | 54 | 0.26 |
| 55 | 55 | 0.26 |
| 56 | 56 | 0.38 |
| 57 | 57 | 0.604 |
| 58 | 58 | 0.18 |
| 59 | 59 | 0.0217 |
| 6 | 6 | 0.97 |
| 60 | 60 | 0.0566 |
| 61 | 61 | 0.0554 |
| 62 | 62 | 0.158 |
| 63 | 63 | 0.106 |
| 64 | 64 | 0.507 |
| 65 | 65 | 0.155 |
| 66 | 66 | 0.632 |
| 67 | 67 | 0.641 |
| 68 | 68 | 0.284 |
| 69 | 69 | 0.555 |
| 7 | 7 | 0.161 |
| 70 | 70 | 0.0844 |
| 71 | 71 | 0.0398 |
| 72 | 72 | 0.279 |
| 73 | 73 | 0.0562 |
| 74 | 74 | 0.968 |
| 75 | 75 | 0.0834 |
| 76 | 76 | 0.727 |
| 77 | 77 | 0.0591 |
| 78 | 78 | 0.0345 |
| 79 | 79 | 0.741 |
| 8 | 8 | 0.412 |
| 80 | 80 | 0.0952 |
| 81 | 81 | 0.758 |
| 82 | 82 | 0.303 |
| 83 | 83 | 0.116 |
| 84 | 84 | 0.946 |
| 85 | 85 | 0.104 |
| 86 | 86 | 0.3 |
| 87 | 87 | 0.0561 |
| 88 | 88 | 0.686 |
| 89 | 89 | 0.253 |
| 9 | 9 | 0.21 |
| 90 | 90 | 0.904 |
| 91 | 91 | 0.732 |
| 92 | 92 | 0.128 |
| 93 | 93 | 0.59 |
| 94 | 94 | 0.45 |
| 95 | 95 | 0.0357 |
| 96 | 96 | 0.698 |
| 97 | 97 | 0.513 |
| 98 | 98 | 0.487 |
| 99 | 99 | 0.365 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs13815
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000348 human neuron samples
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000540 (neuron)
0000003 (native cell)
0000548 (animal cell)
0002371 (somatic cell)
0002319 (neural cell)
0000393 (electrically responsive cell)
0000211 (electrically active cell)
0000404 (electrically signaling cell)
0000255 (eukaryotic cell)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000348 (human neuron samples)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000133 (neurectodermal cell)
CL:0000031 (neuroblast)
CL:0000221 (ectodermal cell)
