FF:11224-116B9: Difference between revisions
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{{f5samples | {{f5samples | ||
| | |DRA_sample_Accession=CAGE@SAMD00005512 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003 | |DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00005512 | ||
|HumanCAGEScanFiles=NCig10040;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.primary_cell.CAGEScan/CD14%2b%2520Monocytes%252c%2520donor1.NCig10040.11224-116B9.hg19.GCTATA.3prime.fq.gz;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.primary_cell.CAGEScan/CD14%2b%2520Monocytes%252c%2520donor1.NCig10040.11224-116B9.hg19.GCTATA.5prime.fq.gz;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.primary_cell.CAGEScan/CD14%2b%2520Monocytes%252c%2520donor1.NCig10040.11224-116B9.hg19.GCTATA.bam;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.primary_cell.CAGEScan/CD14%2b%2520Monocytes%252c%2520donor1.NCig10040.11224-116B9.hg19.GCTATA.pairs.bed.gz | |||
|accession_numbers=CAGE;DRX008126;DRR008998;DRZ000423;DRZ001808;DRZ011773;DRZ013158 | |||
|accession_numbers_RNASeq=sRNA-Seq;DRX037109;DRR041475;DRZ007117 | |||
|ancestors_in_anatomy_facet= | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0000763,CL:0002371,CL:0000766,CL:0000219,CL:0000738,CL:0002087,CL:0000255,CL:0000576,CL:0002393,CL:0002397 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000024 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score=chr2:68592406..68592424,+!p1@PLEK!2.90!793.88!PLEK;;chr11:47400078..47400106,-!p1@SPI1!2.61!405.52!SPI1;;chr3:101546827..101546847,+!p2@NFKBIZ!2.29!267.03!NFKBIZ;;chr2:145277640..145277771,-!p1@ZEB2!2.26!2250.33!ZEB2;;chr16:85932760..85932775,+!p1@IRF8!2.26!178.94!IRF8;;chr2:145271342..145271377,-!p5@ZEB2!2.20!156.23!ZEB2;;chr12:54778471..54778528,-!p1@ZNF385A!2.17!147.36!ZNF385A;;chr12:72056800..72056834,+!p1@THAP2!2.07!154.56!THAP2;;chr14:35873947..35873965,-!p1@NFKBIA!2.06!6671.21!NFKBIA;;chr6:106534192..106534224,+!p1@PRDM1!2.06!305.81!PRDM1;;chr2:145275162..145275202,-!p2@ZEB2!2.03!593.33!ZEB2;;chr11:47400062..47400077,-!p2@SPI1!1.96!90.30!SPI1;;chr11:47399947..47399961,-!p3@SPI1!1.93!83.65!SPI1;;chr7:17338324..17338341,+!p3@AHR!1.91!257.05!AHR;;chr6:106534230..106534254,+!p2@PRDM1!1.87!175.62!PRDM1;;chr20:39317868..39317884,-!p1@MAFB!1.81!708.01!MAFB;;chr2:61108695..61108753,+!p1@REL!1.80!400.54!REL;;chr19:45971246..45971265,+!p1@FOSB!1.78!1036.53!FOSB;;chr10:104154246..104154347,+!p3@NFKB2!1.78!347.36!NFKB2;;chr2:70142232..70142251,+!p1@MXD1!1.78!314.67!MXD1;;chr1:25256756..25256774,-!p1@RUNX3!1.78!108.58!RUNX3;;chr4:103422499..103422632,+!p1@NFKB1!1.77!1142.89!NFKB1;;chr3:39195075..39195088,-!p1@CSRNP1!1.77!341.26!CSRNP1;;chr19:36391434..36391450,-!p1@NFKBID!1.76!109.14!NFKBID;;chr12:72056749..72056767,+!p6@THAP2!1.76!62.05!THAP2;;chr14:35872962..35873025,-!p3@NFKBIA!1.75!136.28!NFKBIA;;chr8:123793988..123794016,+!p1@ZHX2!1.75!95.84!ZHX2;;chr2:192015701..192015743,-!p1@STAT4!1.74!72.57!STAT4;;chr6:12011943..12012015,+!p2@HIVEP1!1.73!162.87!HIVEP1;;chr6:15246200..15246214,+!p2@JARID2!1.72!136.28!JARID2;;chr7:50344289..50344323,+!p1@IKZF1!1.72!52.08!IKZF1;;chr11:47399996..47400014,-!p4@SPI1!1.72!52.08!SPI1;;chr3:101568349..101568365,+!p1@NFKBIZ!1.71!2469.71!NFKBIZ;;chr12:72056773..72056796,+!p3@THAP2!1.71!64.26!THAP2;;chrX:153305787..153305807,-!p3@MECP2!1.70!49.31!MECP2;;chr8:81397876..81397898,+!p5@ZBTB10!1.69!56.51!ZBTB10;;chr16:31885093..31885165,+!p1@ZNF267!1.68!669.78!ZNF267;;chr4:83822199..83822239,+!p2@THAP9!1.68!55.40!THAP9;;chr19:45252008..45252024,+!p2@BCL3!1.67!145.70!BCL3;;chr2:157189180..157189290,-!p1@NR4A2!1.65!218.27!NR4A2;;chr10:3827371..3827386,-!p2@KLF6!1.62!324.64!KLF6;;chr7:115670804..115670825,-!p1@TFEC!1.62!40.44!TFEC;;chr1:151030536..151030549,+!p8@MLLT11!1.61!39.89!MLLT11;;chr2:61108808..61108821,+!p3@REL!1.60!48.20!REL;;chr2:185463247..185463263,+!p1@ZNF804A!1.59!65.37!ZNF804A;;chr8:81397820..81397836,+!p2@ZBTB10!1.59!47.09!ZBTB10;;chrY:2803415..2803468,+!p1@ZFY!1.58!37.12!ZFY;;chr11:47400032..47400043,-!p5@SPI1!1.56!34.90!SPI1;;chr3:39195037..39195069,-!p2@CSRNP1!1.55!206.64!CSRNP1;;chr10:104155480..104155534,+!p2@NFKB2!1.54!209.96!NFKB2;;chr5:142782823..142782854,-!p3@NR3C1!1.51!44.32!NR3C1;;chr7:50343634..50343717,+!p2@IKZF1!1.51!31.58!IKZF1;;chr5:131826457..131826514,-!p1@IRF1!1.50!1147.32!IRF1;;chr6:143266297..143266356,-!p1@HIVEP2!1.50!141.27!HIVEP2;;chr6:144385698..144385742,-!p2@PLAGL1!1.50!37.12!PLAGL1;;chr3:39195139..39195150,-!p3@CSRNP1!1.49!37.67!CSRNP1;;chr11:47400045..47400060,-!p6@SPI1!1.49!29.92!SPI1;;chr9:110252035..110252057,-!p1@KLF4!1.48!443.75!KLF4;;chr8:81397846..81397860,+!p3@ZBTB10!1.47!35.46!ZBTB10;;chr17:38497662..38497713,+!p4@RARA!1.47!32.69!RARA;;chr2:61108878..61108891,+!p5@REL!1.46!27.70!REL;;chr19:45250948..45250998,+!p3@BCL3!1.45!66.48!BCL3;;chr19:54041669..54041697,+!p2@ZNF331!1.45!27.15!ZNF331;;chr6:44233252..44233296,-!p1@NFKBIE!1.44!248.74!NFKBIE;;chr9:129567282..129567353,+!p1@ZBTB43!1.43!329.07!ZBTB43;;chr1:157108130..157108173,-!p1@ETV3!1.43!179.49!ETV3;;chr15:57211634..57211657,+!p5@TCF12!1.43!38.78!TCF12;;chr6:15246261..15246312,+!p1@JARID2!1.41!577.26!JARID2;;chr2:97202480..97202499,+!p1@ARID5A!1.41!242.10!ARID5A;;chr3:187463179..187463201,-!p2@BCL6!1.41!98.61!BCL6;;chr21:30671690..30671762,+!p2@BACH1!1.41!81.99!BACH1;;chr10:104154415..104154434,+!p5@NFKB2!1.41!24.93!NFKB2;;chr8:123794038..123794056,+!p5@ZHX2!1.41!24.93!ZHX2;;chr7:17338266..17338282,+!p1@AHR!1.40!249.30!AHR;;chr10:51572408..51572454,+!p3@NCOA4!1.39!134.07!NCOA4;;chr8:22550982..22550999,-!p1@EGR3!1.39!64.82!EGR3;;chr2:61108771..61108789,+!p4@REL!1.39!35.46!REL;;chr2:68592394..68592405,+!p2@PLEK!1.39!23.82!PLEK;;chr2:145277632..145277638,-!p17@ZEB2!1.39!23.27!ZEB2;;chr17:45810594..45810608,+!p1@TBX21!1.39!23.27!TBX21;;chr12:54778351..54778378,-!p6@ZNF385A!1.39!23.27!ZNF385A;;chr10:104155659..104155676,+!p4@NFKB2!1.37!27.70!NFKB2;;chr9:110250697..110250738,-!p2@KLF4!1.37!26.04!KLF4;;chr9:117150254..117150271,-!p1@AKNA!1.36!59.28!AKNA;;chr9:102584262..102584276,+!p1@NR4A3!1.36!48.20!NR4A3;;chr10:35416142..35416169,+!p3@CREM!1.35!55.40!CREM;;chr21:36260295..36260310,-!p3@RUNX1!1.35!34.35!RUNX1;;chr14:35872926..35872951,-!p4@NFKBIA!1.35!29.92!NFKBIA;;chr13:41593392..41593403,-!p7@ELF1!1.35!21.61!ELF1;;chr21:36421535..36421610,-!p2@RUNX1!1.34!72.02!RUNX1;;chrX:153305741..153305753,-!p4@MECP2!1.34!21.05!MECP2;;chr6:15246741..15246765,+!p9@JARID2!1.34!21.05!JARID2;;chr2:28618532..28618610,+!p4@FOSL2!1.33!34.35!FOSL2;;chr2:192015677..192015691,-!p3@STAT4!1.33!20.50!STAT4;;chr22:38597987..38598021,+!p2@MAFF!1.32!117.45!MAFF;;chr16:69600058..69600065,+!p9@NFAT5!1.32!19.94!NFAT5;;chr8:102218439..102218455,-!p3@ZNF706!1.30!18.84!ZNF706;;chr12:72056897..72056908,+!p12@THAP2!1.30!18.84!THAP2;;chr7:149470641..149470694,-!p1@ZNF467!1.29!83.10!ZNF467;;chrY:21906594..21906622,-!p1@KDM5D!1.29!18.28!KDM5D;;chr21:40177892..40177903,+!p2@ETS2!1.28!70.91!ETS2;;chr18:77155922..77155939,+!p1@NFATC1!1.28!48.75!NFATC1;;chr14:35874077..35874091,-!p8@NFKBIA!1.27!17.73!NFKBIA;;chr4:106066730..106066754,+!p6@TET2!1.26!17.17!TET2;;chr10:3827389..3827408,-!p1@KLF6!1.25!1257.57!KLF6;;chr6:12012170..12012245,+!p1@HIVEP1!1.25!83.10!HIVEP1;;chr3:150126904..150126958,+!p7@TSC22D2!1.25!29.36!TSC22D2;;chr7:106809470..106809481,+!p2@HBP1!1.25!23.27!HBP1;;chr6:391743..391759,+!p1@IRF4!1.25!16.62!IRF4;;chr12:52445218..52445237,+!p1@NR4A1!1.24!202.21!NR4A1;;chr14:35872453..35872485,-!p2@NFKBIA!1.24!40.44!NFKBIA;;chr19:45504688..45504782,+!p1@RELB!1.23!96.40!RELB;;chr9:102584128..102584144,+!p3@NR4A3!1.23!30.47!NR4A3;;chr11:47399920..47399931,-!p7@SPI1!1.23!16.07!SPI1;;chr4:106068026..106068084,+!p1@TET2!1.22!137.39!TET2;;chr14:62162285..62162296,+!p3@HIF1A!1.22!80.33!HIF1A;;chr14:64971288..64971316,-!p2@ZBTB25!1.22!47.64!ZBTB25;;chr9:102584241..102584261,+!p4@NR4A3!1.22!23.82!NR4A3;;chr3:101546918..101546929,+!p4@NFKBIZ!1.22!15.51!NFKBIZ;;chr19:45251395..45251432,+!p8@BCL3!1.22!15.51!BCL3;;chr14:75745523..75745537,+!p1@FOS!1.21!1801.59!FOS;;chr2:208394817..208394834,+!p3@CREB1!1.21!60.94!CREB1;;chr22:29196492..29196503,-!p3@XBP1!1.21!23.82!XBP1;;chr15:57211660..57211687,+!p6@TCF12!1.20!24.38!TCF12;;chr19:54058073..54058088,+!p1@ZNF331!1.20!14.96!ZNF331;;chrX:129244454..129244488,-!p1@ELF4!1.19!103.04!ELF4;;chr2:145275211..145275220,-!p14@ZEB2!1.19!17.73!ZEB2;;chr4:103423079..103423112,+!p4@NFKB1!1.19!14.40!NFKB1;;chr1:212782094..212782109,+!p1@ATF3!1.18!377.82!ATF3;;chr1:37940170..37940190,+!p1@ZC3H12A!1.18!173.40!ZC3H12A;;chr10:35484053..35484076,+!p1@CREM!1.18!35.46!CREM;;chr7:104654718..104654741,+!p3@MLL5!1.18!20.50!MLL5;;chr9:117160738..117160782,-!p2@AKNA!1.17!55.95!AKNA;;chr7:104654690..104654704,+!p2@MLL5!1.17!27.15!MLL5;;chr12:57914286..57914304,-!p1@DDIT3!1.16!480.31!DDIT3;;chr21:30671235..30671253,+!p1@BACH1!1.16!168.41!BACH1;;chr8:123793252..123793266,+!p10@ZHX2!1.16!13.30!ZHX2;;chrX:153305763..153305772,-!p8@MECP2!1.16!13.30!MECP2;;chr19:12902289..12902307,+!p1@JUNB!1.15!2958.89!JUNB;;chr2:192015750..192015793,-!p2@STAT4!1.15!17.73!STAT4;;chr18:3448455..3448480,+!p5@TGIF1!1.14!23.82!TGIF1;;chr6:15246217..15246228,+!p3@JARID2!1.14!22.71!JARID2;;chr8:53373491..53373506,-!p4@ST18!1.14!12.74!ST18;;chr20:56195474..56195506,-!p1@ZBP1!1.14!12.74!ZBP1;;chr13:41593405..41593416,-!p9@ELF1!1.14!12.74!ELF1;;chr4:83822246..83822277,+!p5@THAP9!1.14!12.74!THAP9;;chr2:8822176..8822196,+!p1@ID2!1.13!1724.03!ID2;;chr14:62162258..62162269,+!p2@HIF1A!1.13!119.66!HIF1A;;chr2:60780607..60780624,-!p2@BCL11A!1.13!38.78!BCL11A;;chr3:187463220..187463232,-!p3@BCL6!1.13!37.67!BCL6;;chr16:69599899..69599919,+!p2@NFAT5!1.12!136.84!NFAT5;;chr12:11802753..11802834,+!p2@ETV6!1.12!60.39!ETV6;;chr19:45972701..45972774,+!p2@FOSB!1.12!16.62!FOSB;;chr1:25256439..25256476,-!p3@RUNX3!1.12!12.19!RUNX3;;chr1:26697243..26697258,-!p1@ZNF683!1.12!12.19!ZNF683;;chr5:176735063..176735088,-!p2@MXD3!1.12!12.19!MXD3;;chr6:15246501..15246524,+!p12@JARID2!1.12!12.19!JARID2;;chr2:145277589..145277612,-!p12@ZEB2!1.12!12.19!ZEB2;;chr2:231090433..231090469,+!p1@SP140!1.12!12.19!SP140;;chr2:8819364..8819390,+!p2@ID2!1.12!12.19!ID2;;chr3:101575889..101575903,+!p3@NFKBIZ!1.12!12.19!NFKBIZ;;chr12:96588219..96588263,+!p2@ELK3!1.11!84.76!ELK3;;chr13:41593425..41593480,-!p1@ELF1!1.11!75.34!ELF1;;chr1:156470515..156470542,-!p2@MEF2D!1.11!62.60!MEF2D;;chr19:33793430..33793447,-!p1@CEBPA!1.11!50.41!CEBPA;;chr10:98591801..98591841,+!p3@LCOR!1.11!16.62!LCOR;;chr1:157108282..157108347,-!p3@ETV3!1.10!24.38!ETV3;;chr2:145274981..145274994,-!p9@ZEB2!1.10!17.17!ZEB2;;chr21:34442439..34442455,+!p1@OLIG1!1.10!11.63!OLIG1;;chr2:208031542..208031595,-!p2@KLF7!1.09!80.33!KLF7;;chr7:128577972..128578047,+!p1@IRF5!1.09!17.73!IRF5;;chr10:114709999..114710031,+!p1@TCF7L2!1.08!262.04!TCF7L2;;chr6:12012249..12012266,+!p5@HIVEP1!1.08!19.39!HIVEP1;;chr6:106546808..106546833,+!p3@PRDM1!1.08!13.85!PRDM1;;chr1:151030388..151030419,+!p9@MLLT11!1.08!11.08!MLLT11;;chrX:129244430..129244442,-!p5@ELF4!1.08!11.08!ELF4;;chr3:5021113..5021180,+!p1@BHLHE40!1.06!729.61!BHLHE40;;chr12:54694758..54694805,-!p1@NFE2!1.06!12.74!NFE2;;chr5:142782862..142782881,-!p11@NR3C1!1.06!10.53!NR3C1;;chr17:38497715..38497734,+!p8@RARA!1.06!10.53!RARA;;chr2:97203110..97203159,+!p4@ARID5A!1.06!10.53!ARID5A;;chr2:60780753..60780800,-!p1@BCL11A!1.05!50.97!BCL11A;;chr2:145277882..145277967,-!p3@ZEB2!1.05!17.73!ZEB2;;chr22:38598086..38598105,+!p1@MAFF!1.04!108.58!MAFF;;chr2:208031943..20803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| |expression_enrichment_score=chr2:68592406..68592424,+!p1@PLEK!2.90!793.88!PLEK;;chr11:47400078..47400106,-!p1@SPI1!2.61!405.52!SPI1;;chr3:101546827..101546847,+!p2@NFKBIZ!2.29!267.03!NFKBIZ;;chr2:145277640..145277771,-!p1@ZEB2!2.26!2250.33!ZEB2;;chr16:85932760..85932775,+!p1@IRF8!2.26!178.94!IRF8;;chr2:145271342..145271377,-!p5@ZEB2!2.20!156.23!ZEB2;;chr12:54778471..54778528,-!p1@ZNF385A!2.17!147.36!ZNF385A;;chr12:72056800..72056834,+!p1@THAP2!2.07!154.56!THAP2;;chr14:35873947..35873965,-!p1@NFKBIA!2.06!6671.21!NFKBIA;;chr6:106534192..106534224,+!p1@PRDM1!2.06!305.81!PRDM1;;chr2:145275162..145275202,-!p2@ZEB2!2.03!593.33!ZEB2;;chr11:47400062..47400077,-!p2@SPI1!1.96!90.30!SPI1;;chr11:47399947..47399961,-!p3@SPI1!1.93!83.65!SPI1;;chr7:17338324..17338341,+!p3@AHR!1.91!257.05!AHR;;chr6:106534230..106534254,+!p2@PRDM1!1.87!175.62!PRDM1;;chr20:39317868..39317884,-!p1@MAFB!1.81!708.01!MAFB;;chr2:61108695..61108753,+!p1@REL!1.80!400.54!REL;;chr19:45971246..45971265,+!p1@FOSB!1.78!1036.53!FOSB;;chr10:104154246..104154347,+!p3@NFKB2!1.78!347.36!NFKB2;;chr2:70142232..70142251,+!p1@MXD1!1.78!314.67!MXD1;;chr1:25256756..25256774,-!p1@RUNX3!1.78!108.58!RUNX3;;chr4:103422499..103422632,+!p1@NFKB1!1.77!1142.89!NFKB1;;chr3:39195075..39195088,-!p1@CSRNP1!1.77!341.26!CSRNP1;;chr19:36391434..36391450,-!p1@NFKBID!1.76!109.14!NFKBID;;chr12:72056749..72056767,+!p6@THAP2!1.76!62.05!THAP2;;chr14:35872962..35873025,-!p3@NFKBIA!1.75!136.28!NFKBIA;;chr8:123793988..123794016,+!p1@ZHX2!1.75!95.84!ZHX2;;chr2:192015701..192015743,-!p1@STAT4!1.74!72.57!STAT4;;chr6:12011943..12012015,+!p2@HIVEP1!1.73!162.87!HIVEP1;;chr6:15246200..15246214,+!p2@JARID2!1.72!136.28!JARID2;;chr7:50344289..50344323,+!p1@IKZF1!1.72!52.08!IKZF1;;chr11:47399996..47400014,-!p4@SPI1!1.72!52.08!SPI1;;chr3:101568349..101568365,+!p1@NFKBIZ!1.71!2469.71!NFKBIZ;;chr12:72056773..72056796,+!p3@THAP2!1.71!64.26!THAP2;;chrX:153305787..153305807,-!p3@MECP2!1.70!49.31!MECP2;;chr8:81397876..81397898,+!p5@ZBTB10!1.69!56.51!ZBTB10;;chr16:31885093..31885165,+!p1@ZNF267!1.68!669.78!ZNF267;;chr4:83822199..83822239,+!p2@THAP9!1.68!55.40!THAP9;;chr19:45252008..45252024,+!p2@BCL3!1.67!145.70!BCL3;;chr2:157189180..157189290,-!p1@NR4A2!1.65!218.27!NR4A2;;chr10:3827371..3827386,-!p2@KLF6!1.62!324.64!KLF6;;chr7:115670804..115670825,-!p1@TFEC!1.62!40.44!TFEC;;chr1:151030536..151030549,+!p8@MLLT11!1.61!39.89!MLLT11;;chr2:61108808..61108821,+!p3@REL!1.60!48.20!REL;;chr2:185463247..185463263,+!p1@ZNF804A!1.59!65.37!ZNF804A;;chr8:81397820..81397836,+!p2@ZBTB10!1.59!47.09!ZBTB10;;chrY:2803415..2803468,+!p1@ZFY!1.58!37.12!ZFY;;chr11:47400032..47400043,-!p5@SPI1!1.56!34.90!SPI1;;chr3:39195037..39195069,-!p2@CSRNP1!1.55!206.64!CSRNP1;;chr10:104155480..104155534,+!p2@NFKB2!1.54!209.96!NFKB2;;chr5:142782823..142782854,-!p3@NR3C1!1.51!44.32!NR3C1;;chr7:50343634..50343717,+!p2@IKZF1!1.51!31.58!IKZF1;;chr5:131826457..131826514,-!p1@IRF1!1.50!1147.32!IRF1;;chr6:143266297..143266356,-!p1@HIVEP2!1.50!141.27!HIVEP2;;chr6:144385698..144385742,-!p2@PLAGL1!1.50!37.12!PLAGL1;;chr3:39195139..39195150,-!p3@CSRNP1!1.49!37.67!CSRNP1;;chr11:47400045..47400060,-!p6@SPI1!1.49!29.92!SPI1;;chr9:110252035..110252057,-!p1@KLF4!1.48!443.75!KLF4;;chr8:81397846..81397860,+!p3@ZBTB10!1.47!35.46!ZBTB10;;chr17:38497662..38497713,+!p4@RARA!1.47!32.69!RARA;;chr2:61108878..61108891,+!p5@REL!1.46!27.70!REL;;chr19:45250948..45250998,+!p3@BCL3!1.45!66.48!BCL3;;chr19:54041669..54041697,+!p2@ZNF331!1.45!27.15!ZNF331;;chr6:44233252..44233296,-!p1@NFKBIE!1.44!248.74!NFKBIE;;chr9:129567282..129567353,+!p1@ZBTB43!1.43!329.07!ZBTB43;;chr1:157108130..157108173,-!p1@ETV3!1.43!179.49!ETV3;;chr15:57211634..57211657,+!p5@TCF12!1.43!38.78!TCF12;;chr6:15246261..15246312,+!p1@JARID2!1.41!577.26!JARID2;;chr2:97202480..97202499,+!p1@ARID5A!1.41!242.10!ARID5A;;chr3:187463179..187463201,-!p2@BCL6!1.41!98.61!BCL6;;chr21:30671690..30671762,+!p2@BACH1!1.41!81.99!BACH1;;chr10:104154415..104154434,+!p5@NFKB2!1.41!24.93!NFKB2;;chr8:123794038..123794056,+!p5@ZHX2!1.41!24.93!ZHX2;;chr7:17338266..17338282,+!p1@AHR!1.40!249.30!AHR;;chr10:51572408..51572454,+!p3@NCOA4!1.39!134.07!NCOA4;;chr8:22550982..22550999,-!p1@EGR3!1.39!64.82!EGR3;;chr2:61108771..61108789,+!p4@REL!1.39!35.46!REL;;chr2:68592394..68592405,+!p2@PLEK!1.39!23.82!PLEK;;chr2:145277632..145277638,-!p17@ZEB2!1.39!23.27!ZEB2;;chr17:45810594..45810608,+!p1@TBX21!1.39!23.27!TBX21;;chr12:54778351..54778378,-!p6@ZNF385A!1.39!23.27!ZNF385A;;chr10:104155659..104155676,+!p4@NFKB2!1.37!27.70!NFKB2;;chr9:110250697..110250738,-!p2@KLF4!1.37!26.04!KLF4;;chr9:117150254..117150271,-!p1@AKNA!1.36!59.28!AKNA;;chr9:102584262..102584276,+!p1@NR4A3!1.36!48.20!NR4A3;;chr10:35416142..35416169,+!p3@CREM!1.35!55.40!CREM;;chr21:36260295..36260310,-!p3@RUNX1!1.35!34.35!RUNX1;;chr14:35872926..35872951,-!p4@NFKBIA!1.35!29.92!NFKBIA;;chr13:41593392..41593403,-!p7@ELF1!1.35!21.61!ELF1;;chr21:36421535..36421610,-!p2@RUNX1!1.34!72.02!RUNX1;;chrX:153305741..153305753,-!p4@MECP2!1.34!21.05!MECP2;;chr6:15246741..15246765,+!p9@JARID2!1.34!21.05!JARID2;;chr2:28618532..28618610,+!p4@FOSL2!1.33!34.35!FOSL2;;chr2:192015677..192015691,-!p3@STAT4!1.33!20.50!STAT4;;chr22:38597987..38598021,+!p2@MAFF!1.32!117.45!MAFF;;chr16:69600058..69600065,+!p9@NFAT5!1.32!19.94!NFAT5;;chr8:102218439..102218455,-!p3@ZNF706!1.30!18.84!ZNF706;;chr12:72056897..72056908,+!p12@THAP2!1.30!18.84!THAP2;;chr7:149470641..149470694,-!p1@ZNF467!1.29!83.10!ZNF467;;chrY:21906594..21906622,-!p1@KDM5D!1.29!18.28!KDM5D;;chr21:40177892..40177903,+!p2@ETS2!1.28!70.91!ETS2;;chr18:77155922..77155939,+!p1@NFATC1!1.28!48.75!NFATC1;;chr14:35874077..35874091,-!p8@NFKBIA!1.27!17.73!NFKBIA;;chr4:106066730..106066754,+!p6@TET2!1.26!17.17!TET2;;chr10:3827389..3827408,-!p1@KLF6!1.25!1257.57!KLF6;;chr6:12012170..12012245,+!p1@HIVEP1!1.25!83.10!HIVEP1;;chr3:150126904..150126958,+!p7@TSC22D2!1.25!29.36!TSC22D2;;chr7:106809470..106809481,+!p2@HBP1!1.25!23.27!HBP1;;chr6:391743..391759,+!p1@IRF4!1.25!16.62!IRF4;;chr12:52445218..52445237,+!p1@NR4A1!1.24!202.21!NR4A1;;chr14:35872453..35872485,-!p2@NFKBIA!1.24!40.44!NFKBIA;;chr19:45504688..45504782,+!p1@RELB!1.23!96.40!RELB;;chr9:102584128..102584144,+!p3@NR4A3!1.23!30.47!NR4A3;;chr11:47399920..47399931,-!p7@SPI1!1.23!16.07!SPI1;;chr4:106068026..106068084,+!p1@TET2!1.22!137.39!TET2;;chr14:62162285..62162296,+!p3@HIF1A!1.22!80.33!HIF1A;;chr14:64971288..64971316,-!p2@ZBTB25!1.22!47.64!ZBTB25;;chr9:102584241..102584261,+!p4@NR4A3!1.22!23.82!NR4A3;;chr3:101546918..101546929,+!p4@NFKBIZ!1.22!15.51!NFKBIZ;;chr19:45251395..45251432,+!p8@BCL3!1.22!15.51!BCL3;;chr14:75745523..75745537,+!p1@FOS!1.21!1801.59!FOS;;chr2:208394817..208394834,+!p3@CREB1!1.21!60.94!CREB1;;chr22:29196492..29196503,-!p3@XBP1!1.21!23.82!XBP1;;chr15:57211660..57211687,+!p6@TCF12!1.20!24.38!TCF12;;chr19:54058073..54058088,+!p1@ZNF331!1.20!14.96!ZNF331;;chrX:129244454..129244488,-!p1@ELF4!1.19!103.04!ELF4;;chr2:145275211..145275220,-!p14@ZEB2!1.19!17.73!ZEB2;;chr4:103423079..103423112,+!p4@NFKB1!1.19!14.40!NFKB1;;chr1:212782094..212782109,+!p1@ATF3!1.18!377.82!ATF3;;chr1:37940170..37940190,+!p1@ZC3H12A!1.18!173.40!ZC3H12A;;chr10:35484053..35484076,+!p1@CREM!1.18!35.46!CREM;;chr7:104654718..104654741,+!p3@MLL5!1.18!20.50!MLL5;;chr9:117160738..117160782,-!p2@AKNA!1.17!55.95!AKNA;;chr7:104654690..104654704,+!p2@MLL5!1.17!27.15!MLL5;;chr12:57914286..57914304,-!p1@DDIT3!1.16!480.31!DDIT3;;chr21:30671235..30671253,+!p1@BACH1!1.16!168.41!BACH1;;chr8:123793252..123793266,+!p10@ZHX2!1.16!13.30!ZHX2;;chrX:153305763..153305772,-!p8@MECP2!1.16!13.30!MECP2;;chr19:12902289..12902307,+!p1@JUNB!1.15!2958.89!JUNB;;chr2:192015750..192015793,-!p2@STAT4!1.15!17.73!STAT4;;chr18:3448455..3448480,+!p5@TGIF1!1.14!23.82!TGIF1;;chr6:15246217..15246228,+!p3@JARID2!1.14!22.71!JARID2;;chr8:53373491..53373506,-!p4@ST18!1.14!12.74!ST18;;chr20:56195474..56195506,-!p1@ZBP1!1.14!12.74!ZBP1;;chr13:41593405..41593416,-!p9@ELF1!1.14!12.74!ELF1;;chr4:83822246..83822277,+!p5@THAP9!1.14!12.74!THAP9;;chr2:8822176..8822196,+!p1@ID2!1.13!1724.03!ID2;;chr14:62162258..62162269,+!p2@HIF1A!1.13!119.66!HIF1A;;chr2:60780607..60780624,-!p2@BCL11A!1.13!38.78!BCL11A;;chr3:187463220..187463232,-!p3@BCL6!1.13!37.67!BCL6;;chr16:69599899..69599919,+!p2@NFAT5!1.12!136.84!NFAT5;;chr12:11802753..11802834,+!p2@ETV6!1.12!60.39!ETV6;;chr19:45972701..45972774,+!p2@FOSB!1.12!16.62!FOSB;;chr1:25256439..25256476,-!p3@RUNX3!1.12!12.19!RUNX3;;chr1:26697243..26697258,-!p1@ZNF683!1.12!12.19!ZNF683;;chr5:176735063..176735088,-!p2@MXD3!1.12!12.19!MXD3;;chr6:15246501..15246524,+!p12@JARID2!1.12!12.19!JARID2;;chr2:145277589..145277612,-!p12@ZEB2!1.12!12.19!ZEB2;;chr2:231090433..231090469,+!p1@SP140!1.12!12.19!SP140;;chr2:8819364..8819390,+!p2@ID2!1.12!12.19!ID2;;chr3:101575889..101575903,+!p3@NFKBIZ!1.12!12.19!NFKBIZ;;chr12:96588219..96588263,+!p2@ELK3!1.11!84.76!ELK3;;chr13:41593425..41593480,-!p1@ELF1!1.11!75.34!ELF1;;chr1:156470515..156470542,-!p2@MEF2D!1.11!62.60!MEF2D;;chr19:33793430..33793447,-!p1@CEBPA!1.11!50.41!CEBPA;;chr10:98591801..98591841,+!p3@LCOR!1.11!16.62!LCOR;;chr1:157108282..157108347,-!p3@ETV3!1.10!24.38!ETV3;;chr2:145274981..145274994,-!p9@ZEB2!1.10!17.17!ZEB2;;chr21:34442439..34442455,+!p1@OLIG1!1.10!11.63!OLIG1;;chr2:208031542..208031595,-!p2@KLF7!1.09!80.33!KLF7;;chr7:128577972..128578047,+!p1@IRF5!1.09!17.73!IRF5;;chr10:114709999..114710031,+!p1@TCF7L2!1.08!262.04!TCF7L2;;chr6:12012249..12012266,+!p5@HIVEP1!1.08!19.39!HIVEP1;;chr6:106546808..106546833,+!p3@PRDM1!1.08!13.85!PRDM1;;chr1:151030388..151030419,+!p9@MLLT11!1.08!11.08!MLLT11;;chrX:129244430..129244442,-!p5@ELF4!1.08!11.08!ELF4;;chr3:5021113..5021180,+!p1@BHLHE40!1.06!729.61!BHLHE40;;chr12:54694758..54694805,-!p1@NFE2!1.06!12.74!NFE2;;chr5:142782862..142782881,-!p11@NR3C1!1.06!10.53!NR3C1;;chr17:38497715..38497734,+!p8@RARA!1.06!10.53!RARA;;chr2:97203110..97203159,+!p4@ARID5A!1.06!10.53!ARID5A;;chr2:60780753..60780800,-!p1@BCL11A!1.05!50.97!BCL11A;;chr2:145277882..145277967,-!p3@ZEB2!1.05!17.73!ZEB2;;chr22:38598086..38598105,+!p1@MAFF!1.04!108.58!MAFF;;chr2:208031943..20803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| ||
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000222;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000234;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000576;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000738;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000763;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000766;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000860;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000988;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002397;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002193;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002390;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002405 | |||
|ffid_belonging_in_development=CL:0000049,CL:0000134,CL:0002057 | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 45: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14%252b%2520Monocytes%252c%2520donor1.CNhs10852.11224-116B9.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14%252b%2520Monocytes%252c%2520donor1.CNhs10852.11224-116B9.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14%252b%2520Monocytes%252c%2520donor1.CNhs10852.11224-116B9.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD14%252b%2520Monocytes%252c%2520donor1.CNhs10852.11224-116B9.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD14%252b%2520Monocytes%252c%2520donor1.CNhs10852.11224-116B9.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11224-116B9 | |id=FF:11224-116B9 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000024 | ||
|is_obsolete= | |||
|library_id=CNhs10852 | |||
|library_id_phase_based=2:CNhs10852 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11224 | |||
|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10008.TTAGGC.11224 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11224 | |||
|microRNAs_novel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer_novel/#/human#srna;sample;SRhi10008.TTAGGC.11224 | |||
|name=CD14+ Monocytes, donor1 | |name=CD14+ Monocytes, donor1 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 66: | ||
|profile_cagescan=NCig10040,,, | |profile_cagescan=NCig10040,,, | ||
|profile_hcage=CNhs10852,LSID700,release009,COMPLETED | |profile_hcage=CNhs10852,LSID700,release009,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=SRhi10008,,, | |profile_srnaseq=SRhi10008,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0.367478412259189,0.0681306452555639,0,0.191449731291012,0.635882918321575,-0.160318030086386,0.191449731291012,0.358520786128061,-0.186678694931436,0,0,0,0,0,0,0,0,0,0,0,0,0,0.038126720942584,0,0,0,0.344119467239484,0,-0.0979578962680575,0,0.5697217069788,-0.132956589778862,0,0,0,0.191449731291012,0,0,0,0.88354475051838,0,0.191449731291012,0,0,0.177968997683022,0,0,0,0,0.095724865645506,0,0.323868714649035,0,0.0715098445326715,0,0,0,0.323868714649035,0,0,0,0.0944573700484065,0,1.13804660674969,0.0941061040779147,0,0.968946468215534,0,0,0,0,0.815574699308565,0,0,0,1.64006031959327,0,0,0.88354475051838,0,0,0,0.333099650378221,0.095724865645506,0,0,0.250342230875413,0,0,-0.20688797480098,0,0,0,0.246878104536486,-0.049263045371351,0,0,0.799830634944575,0,0.815881253175497,0.0741257011464785,0,0,0,0,0,0.541031816433245,0,0,0,0,0,0,0.257659222970024,0,0,0,0,0.116229308024913,0.191449731291012,0,0,0.116365956750941,0.304859658015526,0,0.323868714649035,0,0,0,0 | |||
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| |||
|rna_box=116 | |rna_box=116 | ||
|rna_catalog_number=3H100-30-10 | |rna_catalog_number=3H100-30-10 | ||
| Line 56: | Line 83: | ||
|rna_tube_id=116B9 | |rna_tube_id=116B9 | ||
|rna_weight_ug=10 | |rna_weight_ug=10 | ||
|rnaseq_library_id=SRhi10008.TTAGGC | |||
|sample_age=47 | |sample_age=47 | ||
|sample_category=primary cells | |||
|sample_cell_catalog=N/A | |sample_cell_catalog=N/A | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 98: | ||
|sample_ethnicity=C | |sample_ethnicity=C | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;7.76238055007245e-257!GO:0005737;cytoplasm;1.04800722368901e-129!GO:0043227;membrane-bound organelle;1.17806558399728e-126!GO:0043231;intracellular membrane-bound organelle;1.76482089303482e-126!GO:0043226;organelle;1.77902290137319e-118!GO:0043229;intracellular organelle;8.10373094781883e-118!GO:0044444;cytoplasmic part;4.15379000634596e-82!GO:0005515;protein binding;1.35681194394009e-78!GO:0044422;organelle part;4.65868552488143e-76!GO:0044446;intracellular organelle part;1.61785204085478e-74!GO:0044237;cellular metabolic process;5.39491110076012e-67!GO:0044238;primary metabolic process;8.8282309119835e-67!GO:0043170;macromolecule metabolic process;3.49459227626821e-66!GO:0032991;macromolecular complex;1.84941722791611e-59!GO:0003723;RNA binding;8.07302995711759e-57!GO:0005634;nucleus;5.23471599933382e-55!GO:0044428;nuclear part;4.10158794364354e-51!GO:0019538;protein metabolic process;9.01446755083784e-49!GO:0030529;ribonucleoprotein complex;2.23915418210457e-46!GO:0044267;cellular protein metabolic process;9.86668826323023e-45!GO:0044260;cellular macromolecule metabolic process;3.90195095867701e-44!GO:0043233;organelle lumen;3.80153574915887e-43!GO:0031974;membrane-enclosed lumen;3.80153574915887e-43!GO:0033036;macromolecule localization;1.63103665183771e-42!GO:0015031;protein transport;9.05810874623385e-41!GO:0045184;establishment of protein localization;2.17270982849147e-40!GO:0043283;biopolymer metabolic process;9.02632212784216e-40!GO:0008104;protein localization;2.5686558105434e-39!GO:0006412;translation;1.68136895359432e-36!GO:0031090;organelle membrane;1.43098020653895e-33!GO:0031981;nuclear lumen;2.7765057983421e-33!GO:0012501;programmed cell death;2.93862293289434e-33!GO:0006915;apoptosis;3.53961570169852e-33!GO:0016071;mRNA metabolic process;6.63922098894646e-33!GO:0010467;gene expression;1.1837673449665e-32!GO:0016043;cellular component organization and biogenesis;1.43909702943661e-32!GO:0005829;cytosol;4.62218381617932e-32!GO:0043234;protein complex;9.47028052204646e-32!GO:0006396;RNA processing;1.00851933104193e-31!GO:0008219;cell death;1.93222235248333e-31!GO:0016265;death;1.93222235248333e-31!GO:0009059;macromolecule biosynthetic process;2.03453700452416e-28!GO:0046907;intracellular transport;7.04039880618022e-28!GO:0008380;RNA splicing;8.59654639413358e-28!GO:0006886;intracellular protein transport;3.72097818433493e-27!GO:0005739;mitochondrion;4.28276885909035e-27!GO:0006397;mRNA processing;1.27188692169652e-26!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.4797336937633e-26!GO:0009058;biosynthetic process;1.36065539710298e-25!GO:0031967;organelle envelope;2.88910922754071e-25!GO:0031975;envelope;5.58057982101415e-25!GO:0044249;cellular biosynthetic process;2.14064933764812e-24!GO:0065003;macromolecular complex assembly;4.87495126022804e-24!GO:0005654;nucleoplasm;1.04579014062731e-23!GO:0005840;ribosome;1.66405570658331e-23!GO:0000166;nucleotide binding;1.3974840289073e-22!GO:0043412;biopolymer modification;1.99354069488734e-21!GO:0051641;cellular localization;3.04697372302992e-21!GO:0033279;ribosomal subunit;3.07486538458929e-21!GO:0051649;establishment of cellular localization;3.10988685598277e-21!GO:0003735;structural constituent of ribosome;3.73571203698394e-21!GO:0042981;regulation of apoptosis;3.98621890087361e-21!GO:0022607;cellular component assembly;6.04164078510121e-21!GO:0005681;spliceosome;6.98536983483649e-21!GO:0043067;regulation of programmed cell death;8.08464743162672e-21!GO:0044429;mitochondrial part;8.37667182853171e-21!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.1044179554502e-20!GO:0008134;transcription factor binding;1.80072130101876e-20!GO:0044451;nucleoplasm part;6.85350867335433e-20!GO:0006464;protein modification process;2.43469706310073e-19!GO:0048523;negative regulation of cellular process;7.84570096927022e-19!GO:0006512;ubiquitin cycle;3.49192450586815e-18!GO:0044445;cytosolic part;4.58053789209092e-18!GO:0044265;cellular macromolecule catabolic process;6.82307297597769e-18!GO:0007243;protein kinase cascade;7.70628241892975e-18!GO:0043687;post-translational protein modification;8.31527056175077e-18!GO:0016192;vesicle-mediated transport;1.80541534960919e-17!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.96814078035545e-17!GO:0007242;intracellular signaling cascade;2.01526245793825e-17!GO:0050794;regulation of cellular process;2.7963882624866e-17!GO:0006996;organelle organization and biogenesis;3.18739363085337e-17!GO:0019941;modification-dependent protein catabolic process;8.32747370547103e-17!GO:0043632;modification-dependent macromolecule catabolic process;8.32747370547103e-17!GO:0048519;negative regulation of biological process;1.08665251396472e-16!GO:0051603;proteolysis involved in cellular protein catabolic process;1.08665251396472e-16!GO:0006511;ubiquitin-dependent protein catabolic process;1.11697006098582e-16!GO:0017111;nucleoside-triphosphatase activity;1.32181312895521e-16!GO:0044257;cellular protein catabolic process;1.46353765198046e-16!GO:0016462;pyrophosphatase activity;1.52921277005603e-16!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.53867239969051e-16!GO:0032553;ribonucleotide binding;1.67056874602687e-16!GO:0032555;purine ribonucleotide binding;1.67056874602687e-16!GO:0003676;nucleic acid binding;1.80108421078641e-16!GO:0016817;hydrolase activity, acting on acid anhydrides;1.93310643762415e-16!GO:0005740;mitochondrial envelope;5.96177387818265e-16!GO:0017076;purine nucleotide binding;6.82485682933362e-16!GO:0006259;DNA metabolic process;7.1475655994601e-16!GO:0031966;mitochondrial membrane;1.17340713596739e-15!GO:0043285;biopolymer catabolic process;1.7719155682748e-15!GO:0006119;oxidative phosphorylation;2.41081440948417e-15!GO:0006605;protein targeting;3.46056707414421e-15!GO:0022618;protein-RNA complex assembly;3.73190604582203e-15!GO:0016070;RNA metabolic process;6.07165288810364e-15!GO:0006793;phosphorus metabolic process;1.25147385260082e-14!GO:0006796;phosphate metabolic process;1.25147385260082e-14!GO:0019866;organelle inner membrane;1.54535369403335e-14!GO:0006913;nucleocytoplasmic transport;2.12179697206046e-14!GO:0048770;pigment granule;2.83856246627739e-14!GO:0042470;melanosome;2.83856246627739e-14!GO:0051169;nuclear transport;4.73877559826348e-14!GO:0007249;I-kappaB kinase/NF-kappaB cascade;4.99205473124257e-14!GO:0050789;regulation of biological process;6.19395129377482e-14!GO:0016604;nuclear body;8.46553221688521e-14!GO:0009057;macromolecule catabolic process;1.20524417695105e-13!GO:0065009;regulation of a molecular function;1.50831929344231e-13!GO:0005794;Golgi apparatus;1.61046996091945e-13!GO:0002376;immune system process;1.77710955203047e-13!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;2.39322197286421e-13!GO:0043069;negative regulation of programmed cell death;4.48532230908739e-13!GO:0016874;ligase activity;5.63692658287978e-13!GO:0043066;negative regulation of apoptosis;6.01346988132216e-13!GO:0005768;endosome;6.65049046132095e-13!GO:0012505;endomembrane system;6.99777149729333e-13!GO:0016310;phosphorylation;8.9508582340135e-13!GO:0030163;protein catabolic process;9.17365574241111e-13!GO:0005524;ATP binding;1.22314885241779e-12!GO:0051246;regulation of protein metabolic process;1.48591620257294e-12!GO:0044248;cellular catabolic process;1.64728339894681e-12!GO:0032559;adenyl ribonucleotide binding;1.77032595450516e-12!GO:0008135;translation factor activity, nucleic acid binding;2.27866583558889e-12!GO:0005773;vacuole;3.32146833002814e-12!GO:0006366;transcription from RNA polymerase II promoter;3.38830805915164e-12!GO:0003712;transcription cofactor activity;3.47644368330802e-12!GO:0016607;nuclear speck;4.11350432076425e-12!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);6.17251797935922e-12!GO:0065007;biological regulation;6.68280161011828e-12!GO:0005743;mitochondrial inner membrane;6.98550903385603e-12!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;7.15615456727532e-12!GO:0030554;adenyl nucleotide binding;8.00741465295189e-12!GO:0015935;small ribosomal subunit;9.00828984587077e-12!GO:0006916;anti-apoptosis;1.9665664683649e-11!GO:0000502;proteasome complex (sensu Eukaryota);3.94786409315026e-11!GO:0006950;response to stress;4.77371727752862e-11!GO:0000323;lytic vacuole;8.44833638342897e-11!GO:0005764;lysosome;8.44833638342897e-11!GO:0031324;negative regulation of cellular metabolic process;8.67175118409022e-11!GO:0048522;positive regulation of cellular process;1.16803097063119e-10!GO:0044455;mitochondrial membrane part;1.38953061530221e-10!GO:0015934;large ribosomal subunit;1.42702683087211e-10!GO:0006457;protein folding;1.46332958310226e-10!GO:0007049;cell cycle;2.24661556858466e-10!GO:0006413;translational initiation;2.36833972202227e-10!GO:0005783;endoplasmic reticulum;2.47726801817319e-10!GO:0003743;translation initiation factor activity;3.09220281499476e-10!GO:0006446;regulation of translational initiation;4.00098019530287e-10!GO:0006325;establishment and/or maintenance of chromatin architecture;4.99755488598506e-10!GO:0008639;small protein conjugating enzyme activity;7.19437345018132e-10!GO:0006955;immune response;8.0780213025417e-10!GO:0048518;positive regulation of biological process;8.96329536435805e-10!GO:0004842;ubiquitin-protein ligase activity;9.4626605114043e-10!GO:0019899;enzyme binding;1.02228716365039e-09!GO:0050790;regulation of catalytic activity;1.02228716365039e-09!GO:0005746;mitochondrial respiratory chain;1.24042003528731e-09!GO:0005635;nuclear envelope;1.3628058927892e-09!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.52153528969725e-09!GO:0000398;nuclear mRNA splicing, via spliceosome;1.8004419344233e-09!GO:0000375;RNA splicing, via transesterification reactions;1.8004419344233e-09!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.8004419344233e-09!GO:0017038;protein import;1.92940343710738e-09!GO:0006323;DNA packaging;2.02189754954532e-09!GO:0048193;Golgi vesicle transport;2.35272777297888e-09!GO:0019787;small conjugating protein ligase activity;2.82706863543949e-09!GO:0009892;negative regulation of metabolic process;2.8778797619003e-09!GO:0005730;nucleolus;2.91192092706749e-09!GO:0016564;transcription repressor activity;3.31908017008274e-09!GO:0042623;ATPase activity, coupled;3.96067190960173e-09!GO:0016568;chromatin modification;4.02217358840582e-09!GO:0016787;hydrolase activity;4.30582873503791e-09!GO:0043228;non-membrane-bound organelle;4.93909857030262e-09!GO:0043232;intracellular non-membrane-bound organelle;4.93909857030262e-09!GO:0007264;small GTPase mediated signal transduction;5.8233327416331e-09!GO:0051726;regulation of cell cycle;6.15498626539515e-09!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;7.0578962836301e-09!GO:0009967;positive regulation of signal transduction;7.48738210108518e-09!GO:0000074;regulation of progression through cell cycle;7.5695849001079e-09!GO:0031965;nuclear membrane;8.29184936281208e-09!GO:0016887;ATPase activity;8.34452994001822e-09!GO:0006417;regulation of translation;1.07250664513481e-08!GO:0019829;cation-transporting ATPase activity;1.09487594920818e-08!GO:0009615;response to virus;1.26458510441285e-08!GO:0043065;positive regulation of apoptosis;1.30125834445281e-08!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.35735963951239e-08!GO:0044432;endoplasmic reticulum part;1.55927055534078e-08!GO:0051170;nuclear import;1.77485294207799e-08!GO:0008047;enzyme activator activity;1.8926875239051e-08!GO:0050136;NADH dehydrogenase (quinone) activity;1.89778176559805e-08!GO:0003954;NADH dehydrogenase activity;1.89778176559805e-08!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.89778176559805e-08!GO:0016481;negative regulation of transcription;1.90188518120909e-08!GO:0043068;positive regulation of programmed cell death;1.95608705305694e-08!GO:0006606;protein import into nucleus;1.98622074820948e-08!GO:0004386;helicase activity;2.36134302234859e-08!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;2.74844847104007e-08!GO:0051186;cofactor metabolic process;2.91214693287317e-08!GO:0045786;negative regulation of progression through cell cycle;2.99513077769444e-08!GO:0019222;regulation of metabolic process;3.34993080346306e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;3.79123854007761e-08!GO:0008026;ATP-dependent helicase activity;4.64590404219331e-08!GO:0009966;regulation of signal transduction;5.10639313563937e-08!GO:0044453;nuclear membrane part;5.78210551079771e-08!GO:0009152;purine ribonucleotide biosynthetic process;6.11552672782757e-08!GO:0006917;induction of apoptosis;6.5292864625212e-08!GO:0051276;chromosome organization and biogenesis;6.84642829591332e-08!GO:0006461;protein complex assembly;7.00284098689635e-08!GO:0005793;ER-Golgi intermediate compartment;7.71709508934803e-08!GO:0016772;transferase activity, transferring phosphorus-containing groups;8.19153130677892e-08!GO:0048468;cell development;9.90675783221123e-08!GO:0051082;unfolded protein binding;9.90675783221123e-08!GO:0006164;purine nucleotide biosynthetic process;1.01468803528443e-07!GO:0012502;induction of programmed cell death;1.11998292682773e-07!GO:0016563;transcription activator activity;1.15952265226073e-07!GO:0015986;ATP synthesis coupled proton transport;1.3846854870362e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.3846854870362e-07!GO:0009260;ribonucleotide biosynthetic process;1.40449462762578e-07!GO:0009056;catabolic process;1.42355836242534e-07!GO:0003713;transcription coactivator activity;1.46694419562138e-07!GO:0009259;ribonucleotide metabolic process;1.74188644910662e-07!GO:0009150;purine ribonucleotide metabolic process;1.74962709680897e-07!GO:0006732;coenzyme metabolic process;1.77436579213261e-07!GO:0050657;nucleic acid transport;1.84553184656715e-07!GO:0051236;establishment of RNA localization;1.84553184656715e-07!GO:0050658;RNA transport;1.84553184656715e-07!GO:0003924;GTPase activity;1.91167456585245e-07!GO:0009889;regulation of biosynthetic process;2.1621979241181e-07!GO:0030695;GTPase regulator activity;2.28354186790513e-07!GO:0006163;purine nucleotide metabolic process;2.42998342158157e-07!GO:0042775;organelle ATP synthesis coupled electron transport;2.47292652723227e-07!GO:0042773;ATP synthesis coupled electron transport;2.47292652723227e-07!GO:0016881;acid-amino acid ligase activity;2.47752495611005e-07!GO:0006403;RNA localization;3.28800790457548e-07!GO:0044440;endosomal part;3.37173006198924e-07!GO:0010008;endosome membrane;3.37173006198924e-07!GO:0031326;regulation of cellular biosynthetic process;3.66767199398844e-07!GO:0016879;ligase activity, forming carbon-nitrogen bonds;3.81989933161117e-07!GO:0005770;late endosome;5.09894271336241e-07!GO:0030964;NADH dehydrogenase complex (quinone);5.21903150073136e-07!GO:0045271;respiratory chain complex I;5.21903150073136e-07!GO:0005747;mitochondrial respiratory chain complex I;5.21903150073136e-07!GO:0015078;hydrogen ion transmembrane transporter activity;5.4616246245762e-07!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;6.18731637940865e-07!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;8.97505726517391e-07!GO:0006974;response to DNA damage stimulus;9.82639012228074e-07!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.06077559121477e-06!GO:0031980;mitochondrial lumen;1.06077559121477e-06!GO:0005759;mitochondrial matrix;1.06077559121477e-06!GO:0032446;protein modification by small protein conjugation;1.12006740670936e-06!GO:0009142;nucleoside triphosphate biosynthetic process;1.19912099711821e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.19912099711821e-06!GO:0045321;leukocyte activation;1.269682223095e-06!GO:0006754;ATP biosynthetic process;1.2925856617295e-06!GO:0006753;nucleoside phosphate metabolic process;1.2925856617295e-06!GO:0005525;GTP binding;1.35979758982626e-06!GO:0022402;cell cycle process;1.51465031453813e-06!GO:0005789;endoplasmic reticulum membrane;1.5216099836537e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.5955365297594e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.5955365297594e-06!GO:0016567;protein ubiquitination;1.68753580566654e-06!GO:0016740;transferase activity;1.76016441390771e-06!GO:0008565;protein transporter activity;2.16880734326688e-06!GO:0003714;transcription corepressor activity;2.16880734326688e-06!GO:0016469;proton-transporting two-sector ATPase complex;2.26269910840158e-06!GO:0004674;protein serine/threonine kinase activity;2.3805084638024e-06!GO:0031252;leading edge;2.43958413363207e-06!GO:0051336;regulation of hydrolase activity;2.46252725439121e-06!GO:0005096;GTPase activator activity;2.62915515754988e-06!GO:0016044;membrane organization and biogenesis;2.77336556988694e-06!GO:0051028;mRNA transport;2.97685113473722e-06!GO:0006357;regulation of transcription from RNA polymerase II promoter;3.23120684335293e-06!GO:0009055;electron carrier activity;3.68667456517307e-06!GO:0009199;ribonucleoside triphosphate metabolic process;4.39293223697338e-06!GO:0007265;Ras protein signal transduction;4.67296407180496e-06!GO:0005643;nuclear pore;5.26715990665436e-06!GO:0005083;small GTPase regulator activity;5.33014789017472e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;5.93487772801997e-06!GO:0009144;purine nucleoside triphosphate metabolic process;5.93487772801997e-06!GO:0016197;endosome transport;7.87582762385789e-06!GO:0046034;ATP metabolic process;8.29347821732208e-06!GO:0008632;apoptotic program;8.78834434307782e-06!GO:0005769;early endosome;8.97925918603805e-06!GO:0031323;regulation of cellular metabolic process;9.77195900442857e-06!GO:0009141;nucleoside triphosphate metabolic process;9.87771846109873e-06!GO:0005774;vacuolar membrane;1.01197036296396e-05!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;1.05573602871806e-05!GO:0030120;vesicle coat;1.21703504832411e-05!GO:0030662;coated vesicle membrane;1.21703504832411e-05!GO:0048475;coated membrane;1.34492145021929e-05!GO:0030117;membrane coat;1.34492145021929e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;1.35860015034989e-05!GO:0009060;aerobic respiration;1.36411429975784e-05!GO:0005839;proteasome core complex (sensu Eukaryota);1.39850627555471e-05!GO:0051188;cofactor biosynthetic process;1.49762864240723e-05!GO:0042110;T cell activation;1.739591519018e-05!GO:0046649;lymphocyte activation;1.98194793369703e-05!GO:0032561;guanyl ribonucleotide binding;2.30860346471716e-05!GO:0019001;guanyl nucleotide binding;2.30860346471716e-05!GO:0006281;DNA repair;2.75370564981498e-05!GO:0006401;RNA catabolic process;2.84621121978335e-05!GO:0009108;coenzyme biosynthetic process;2.92302777386736e-05!GO:0009607;response to biotic stimulus;3.35247199696031e-05!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;3.56661238619671e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;3.88400086104174e-05!GO:0006888;ER to Golgi vesicle-mediated transport;3.91684679694987e-05!GO:0044437;vacuolar part;4.02662273003018e-05!GO:0004298;threonine endopeptidase activity;4.12761921678898e-05!GO:0065002;intracellular protein transport across a membrane;4.59959188033867e-05!GO:0016773;phosphotransferase activity, alcohol group as acceptor;4.7555307705992e-05!GO:0001775;cell activation;4.7555307705992e-05!GO:0044431;Golgi apparatus part;4.89175685357886e-05!GO:0007050;cell cycle arrest;5.09577949222269e-05!GO:0016301;kinase activity;5.13920798283327e-05!GO:0006752;group transfer coenzyme metabolic process;5.69457794964089e-05!GO:0051338;regulation of transferase activity;5.92482963301282e-05!GO:0045259;proton-transporting ATP synthase complex;6.31993235920721e-05!GO:0006402;mRNA catabolic process;6.31993235920721e-05!GO:0009893;positive regulation of metabolic process;6.47262999381397e-05!GO:0005765;lysosomal membrane;6.81877783448984e-05!GO:0043566;structure-specific DNA binding;7.39899170213099e-05!GO:0045892;negative regulation of transcription, DNA-dependent;7.48228318116193e-05!GO:0003697;single-stranded DNA binding;7.49091169678917e-05!GO:0043549;regulation of kinase activity;7.53938993832663e-05!GO:0051168;nuclear export;7.93633779919357e-05!GO:0006333;chromatin assembly or disassembly;8.06445691637074e-05!GO:0046930;pore complex;8.09711951163852e-05!GO:0065004;protein-DNA complex assembly;8.38768418883872e-05!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;8.56784092037128e-05!GO:0005057;receptor signaling protein activity;8.62011480536163e-05!GO:0000151;ubiquitin ligase complex;9.23898984599754e-05!GO:0031982;vesicle;9.23898984599754e-05!GO:0030097;hemopoiesis;9.49924494859453e-05!GO:0060090;molecular adaptor activity;9.95834052382303e-05!GO:0051090;regulation of transcription factor activity;0.00010671519571025!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.000109109443373078!GO:0030532;small nuclear ribonucleoprotein complex;0.000120990543860043!GO:0042254;ribosome biogenesis and assembly;0.000132881466024907!GO:0008654;phospholipid biosynthetic process;0.000147954895440495!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000152250338751708!GO:0010468;regulation of gene expression;0.000156375344769578!GO:0006613;cotranslational protein targeting to membrane;0.000160105064075695!GO:0006897;endocytosis;0.000169399791000662!GO:0010324;membrane invagination;0.000169399791000662!GO:0030036;actin cytoskeleton organization and biogenesis;0.000170231417358341!GO:0045333;cellular respiration;0.000171260170980633!GO:0008234;cysteine-type peptidase activity;0.000175826771547979!GO:0002757;immune response-activating signal transduction;0.000175987391052699!GO:0045859;regulation of protein kinase activity;0.000186714362055998!GO:0009719;response to endogenous stimulus;0.000193421326135038!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000230974555797365!GO:0015399;primary active transmembrane transporter activity;0.000230974555797365!GO:0003724;RNA helicase activity;0.00023106481236254!GO:0045941;positive regulation of transcription;0.000234133233520551!GO:0022415;viral reproductive process;0.000261860966593152!GO:0043087;regulation of GTPase activity;0.000264858389385498!GO:0046822;regulation of nucleocytoplasmic transport;0.000288164794872852!GO:0031902;late endosome membrane;0.000291065090137679!GO:0005885;Arp2/3 protein complex;0.000298116757030352!GO:0005813;centrosome;0.000331929616972056!GO:0030099;myeloid cell differentiation;0.000331929616972056!GO:0046519;sphingoid metabolic process;0.000337761960381893!GO:0005798;Golgi-associated vesicle;0.000381937466773789!GO:0043623;cellular protein complex assembly;0.000388006497268185!GO:0031410;cytoplasmic vesicle;0.000390170692854876!GO:0000785;chromatin;0.000391296252218696!GO:0006468;protein amino acid phosphorylation;0.000393889055428941!GO:0005761;mitochondrial ribosome;0.000393889055428941!GO:0000313;organellar ribosome;0.000393889055428941!GO:0000245;spliceosome assembly;0.000423932960657238!GO:0046983;protein dimerization activity;0.000430010741306863!GO:0002764;immune response-regulating signal transduction;0.000461099614831398!GO:0005694;chromosome;0.000475077749865996!GO:0006672;ceramide metabolic process;0.000504126077149722!GO:0007005;mitochondrion organization and biogenesis;0.000504126077149722!GO:0051223;regulation of protein transport;0.000506481145721493!GO:0005667;transcription factor complex;0.000526317453220894!GO:0045893;positive regulation of transcription, DNA-dependent;0.000546601658244178!GO:0051789;response to protein stimulus;0.000549977307483308!GO:0006986;response to unfolded protein;0.000549977307483308!GO:0031988;membrane-bound vesicle;0.000553749258997902!GO:0007034;vacuolar transport;0.000565593697234361!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.000583923574450061!GO:0001726;ruffle;0.000589797414744476!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.00069783339670487!GO:0003729;mRNA binding;0.000700530550730765!GO:0009117;nucleotide metabolic process;0.000714358651520577!GO:0032940;secretion by cell;0.00072212734152842!GO:0043492;ATPase activity, coupled to movement of substances;0.000737628648540039!GO:0002429;immune response-activating cell surface receptor signaling pathway;0.000750114518465186!GO:0006099;tricarboxylic acid cycle;0.000750114518465186!GO:0046356;acetyl-CoA catabolic process;0.000750114518465186!GO:0006919;caspase activation;0.000755849410295208!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000812571595352742!GO:0006643;membrane lipid metabolic process;0.000862359095832348!GO:0001816;cytokine production;0.00090639145541247!GO:0000139;Golgi membrane;0.000970815488685731!GO:0042802;identical protein binding;0.000972341767849056!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000978787784059128!GO:0007041;lysosomal transport;0.000998575425901765!GO:0006350;transcription;0.00100290896862403!GO:0033116;ER-Golgi intermediate compartment membrane;0.00103021992181547!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00103748587126253!GO:0043281;regulation of caspase activity;0.00103748587126253!GO:0045637;regulation of myeloid cell differentiation;0.00104698410521368!GO:0043085;positive regulation of catalytic activity;0.00104712246136328!GO:0019904;protein domain specific binding;0.00106799256097652!GO:0016363;nuclear matrix;0.00106799256097652!GO:0006399;tRNA metabolic process;0.00107153003635285!GO:0005070;SH3/SH2 adaptor activity;0.00110562418557454!GO:0031325;positive regulation of cellular metabolic process;0.00112592252734753!GO:0022890;inorganic cation transmembrane transporter activity;0.00113965828085686!GO:0005099;Ras GTPase activator activity;0.00120528727851988!GO:0005741;mitochondrial outer membrane;0.00122113080151003!GO:0051427;hormone receptor binding;0.00122119126463489!GO:0016023;cytoplasmic membrane-bound vesicle;0.00122197898910428!GO:0005637;nuclear inner membrane;0.00125363984749987!GO:0006612;protein targeting to membrane;0.00140872500493218!GO:0002520;immune system development;0.0014197076349997!GO:0043280;positive regulation of caspase activity;0.00143192541515731!GO:0006818;hydrogen transport;0.00145191891698123!GO:0005815;microtubule organizing center;0.00151461125518833!GO:0031901;early endosome membrane;0.00155540257705573!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.00156251957174602!GO:0015992;proton transport;0.0015655660727701!GO:0030029;actin filament-based process;0.00161983516004381!GO:0001819;positive regulation of cytokine production;0.00165987382564941!GO:0008186;RNA-dependent ATPase activity;0.001670734884093!GO:0019221;cytokine and chemokine mediated signaling pathway;0.00169672768307024!GO:0007259;JAK-STAT cascade;0.00170915807951256!GO:0018193;peptidyl-amino acid modification;0.00171325777903215!GO:0002521;leukocyte differentiation;0.00179703242771373!GO:0002768;immune response-regulating cell surface receptor signaling pathway;0.00179801721742913!GO:0030658;transport vesicle membrane;0.00186574528483854!GO:0035257;nuclear hormone receptor binding;0.00188660577370664!GO:0033157;regulation of intracellular protein transport;0.00192465499797364!GO:0042306;regulation of protein import into nucleus;0.00192465499797364!GO:0044427;chromosomal part;0.00207554411052142!GO:0031968;organelle outer membrane;0.00210711775490408!GO:0019843;rRNA binding;0.00211027423610439!GO:0051187;cofactor catabolic process;0.00221874122779624!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.00231461441711675!GO:0004812;aminoacyl-tRNA ligase activity;0.00231461441711675!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.00231461441711675!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00231495072467959!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00234313475042539!GO:0002274;myeloid leukocyte activation;0.00243850476694225!GO:0051345;positive regulation of hydrolase activity;0.00247285618889075!GO:0051059;NF-kappaB binding;0.00258727858746723!GO:0000278;mitotic cell cycle;0.00262072920220171!GO:0006084;acetyl-CoA metabolic process;0.00265316494057537!GO:0019867;outer membrane;0.00265872766511094!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.0027023929759344!GO:0007040;lysosome organization and biogenesis;0.00280860084699958!GO:0033673;negative regulation of kinase activity;0.00284180909651391!GO:0006469;negative regulation of protein kinase activity;0.00284180909651391!GO:0051092;activation of NF-kappaB transcription factor;0.00298441123774136!GO:0048534;hemopoietic or lymphoid organ development;0.00301694149806787!GO:0043433;negative regulation of transcription factor activity;0.00301694149806787!GO:0006954;inflammatory response;0.0030192425778967!GO:0009109;coenzyme catabolic process;0.00306740040744719!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00318788693978166!GO:0016072;rRNA metabolic process;0.00335355655132456!GO:0043021;ribonucleoprotein binding;0.00349426228033588!GO:0019901;protein kinase binding;0.0035842498162246!GO:0030384;phosphoinositide metabolic process;0.00383968159269367!GO:0005788;endoplasmic reticulum lumen;0.00383968159269367!GO:0043038;amino acid activation;0.00383968159269367!GO:0006418;tRNA aminoacylation for protein translation;0.00383968159269367!GO:0043039;tRNA aminoacylation;0.00383968159269367!GO:0006364;rRNA processing;0.00384715913637231!GO:0045646;regulation of erythrocyte differentiation;0.00386106042932437!GO:0006260;DNA replication;0.00388451111080436!GO:0032318;regulation of Ras GTPase activity;0.00400445601281607!GO:0046467;membrane lipid biosynthetic process;0.00400445601281607!GO:0004004;ATP-dependent RNA helicase activity;0.00402364680320673!GO:0051251;positive regulation of lymphocyte activation;0.00412044525029071!GO:0051348;negative regulation of transferase activity;0.00428036494863984!GO:0006611;protein export from nucleus;0.00448679072867546!GO:0031625;ubiquitin protein ligase binding;0.00456556881007628!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00458372975711496!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00462628822583131!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00462628822583131!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00462628822583131!GO:0006891;intra-Golgi vesicle-mediated transport;0.00486036110686546!GO:0048471;perinuclear region of cytoplasm;0.00491439299518836!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00510246290796812!GO:0007033;vacuole organization and biogenesis;0.00510978023605877!GO:0006352;transcription initiation;0.00512568290176461!GO:0042990;regulation of transcription factor import into nucleus;0.00512568290176461!GO:0042991;transcription factor import into nucleus;0.00512568290176461!GO:0001817;regulation of cytokine production;0.00514106579315742!GO:0030660;Golgi-associated vesicle membrane;0.00518210921087419!GO:0030867;rough endoplasmic reticulum membrane;0.00519786473886764!GO:0004197;cysteine-type endopeptidase activity;0.0052448053100921!GO:0045454;cell redox homeostasis;0.00557784830136222!GO:0006650;glycerophospholipid metabolic process;0.00558487503284801!GO:0003725;double-stranded RNA binding;0.0056248870295101!GO:0030258;lipid modification;0.00565385142632733!GO:0004428;inositol or phosphatidylinositol kinase activity;0.00567160257061617!GO:0051056;regulation of small GTPase mediated signal transduction;0.0056944915729791!GO:0016779;nucleotidyltransferase activity;0.00575947932722181!GO:0051235;maintenance of localization;0.00577802823079864!GO:0030217;T cell differentiation;0.0059231598679727!GO:0046578;regulation of Ras protein signal transduction;0.00595523597041719!GO:0030027;lamellipodium;0.00633622860843381!GO:0017091;AU-rich element binding;0.0063385339438561!GO:0050779;RNA destabilization;0.0063385339438561!GO:0000289;poly(A) tail shortening;0.0063385339438561!GO:0005048;signal sequence binding;0.00672452172199613!GO:0051091;positive regulation of transcription factor activity;0.00687838476306657!GO:0009165;nucleotide biosynthetic process;0.00702084539368626!GO:0019079;viral genome replication;0.00702674956496993!GO:0051707;response to other organism;0.00705536777953255!GO:0051252;regulation of RNA metabolic process;0.00716500028331268!GO:0030218;erythrocyte differentiation;0.00742491830898775!GO:0030118;clathrin coat;0.00762943237080953!GO:0019058;viral infectious cycle;0.00765267631996823!GO:0045746;negative regulation of Notch signaling pathway;0.0077471021078794!GO:0050851;antigen receptor-mediated signaling pathway;0.00779708174291808!GO:0004185;serine carboxypeptidase activity;0.00815111475686366!GO:0016791;phosphoric monoester hydrolase activity;0.00815530637161286!GO:0001516;prostaglandin biosynthetic process;0.00850068134704804!GO:0046457;prostanoid biosynthetic process;0.00850068134704804!GO:0006607;NLS-bearing substrate import into nucleus;0.0087069898432442!GO:0000209;protein polyubiquitination;0.00886472354667607!GO:0045045;secretory pathway;0.00889634930816782!GO:0019220;regulation of phosphate metabolic process;0.00890662591501614!GO:0051174;regulation of phosphorus metabolic process;0.00890662591501614!GO:0004715;non-membrane spanning protein tyrosine kinase activity;0.00894458943829557!GO:0006952;defense response;0.0091980186063699!GO:0044262;cellular carbohydrate metabolic process;0.00926248866308835!GO:0000165;MAPKKK cascade;0.00926248866308835!GO:0016251;general RNA polymerase II transcription factor activity;0.00927205188754936!GO:0031072;heat shock protein binding;0.00948587416226405!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.00948587416226405!GO:0030176;integral to endoplasmic reticulum membrane;0.00989193074995444!GO:0006984;ER-nuclear signaling pathway;0.00998115187081382!GO:0000118;histone deacetylase complex;0.01007447229807!GO:0004672;protein kinase activity;0.0103928808283606!GO:0043488;regulation of mRNA stability;0.0104217875372259!GO:0043487;regulation of RNA stability;0.0104217875372259!GO:0019883;antigen processing and presentation of endogenous antigen;0.0107405364967583!GO:0000082;G1/S transition of mitotic cell cycle;0.0109216909865637!GO:0008637;apoptotic mitochondrial changes;0.0114303773435058!GO:0016311;dephosphorylation;0.0114435342491097!GO:0051325;interphase;0.0114963216488214!GO:0051098;regulation of binding;0.0115695082375461!GO:0008383;manganese superoxide dismutase activity;0.0115695082375461!GO:0001315;age-dependent response to reactive oxygen species;0.0115695082375461!GO:0006414;translational elongation;0.0116455485837339!GO:0031497;chromatin assembly;0.0118196979551116!GO:0008361;regulation of cell size;0.012201945647885!GO:0051329;interphase of mitotic cell cycle;0.0122107496402283!GO:0003746;translation elongation factor activity;0.0133551854638571!GO:0015923;mannosidase activity;0.0133685524326091!GO:0043621;protein self-association;0.013756514179324!GO:0033367;protein localization in mast cell secretory granule;0.0138722727593453!GO:0033365;protein localization in organelle;0.0138722727593453!GO:0033371;T cell secretory granule organization and biogenesis;0.0138722727593453!GO:0033373;maintenance of protease localization in mast cell secretory granule;0.0138722727593453!GO:0033375;protease localization in T cell secretory granule;0.0138722727593453!GO:0042629;mast cell granule;0.0138722727593453!GO:0033377;maintenance of protein localization in T cell secretory granule;0.0138722727593453!GO:0033364;mast cell secretory granule organization and biogenesis;0.0138722727593453!GO:0033380;granzyme B localization in T cell secretory granule;0.0138722727593453!GO:0033379;maintenance of protease localization in T cell secretory granule;0.0138722727593453!GO:0033370;maintenance of protein localization in mast cell secretory granule;0.0138722727593453!GO:0033368;protease localization in mast cell secretory granule;0.0138722727593453!GO:0033366;protein localization in secretory granule;0.0138722727593453!GO:0033382;maintenance of granzyme B localization in T cell secretory granule;0.0138722727593453!GO:0033374;protein localization in T cell secretory granule;0.0138722727593453!GO:0046474;glycerophospholipid biosynthetic process;0.0140417887337009!GO:0030041;actin filament polymerization;0.0141120145672712!GO:0008624;induction of apoptosis by extracellular signals;0.0141224011694231!GO:0008287;protein serine/threonine phosphatase complex;0.0142510635207802!GO:0019900;kinase binding;0.014338649839198!GO:0030133;transport vesicle;0.0143453986044458!GO:0015631;tubulin binding;0.0145745085456193!GO:0032386;regulation of intracellular transport;0.0149310632748871!GO:0004722;protein serine/threonine phosphatase activity;0.0149659825680989!GO:0005484;SNAP receptor activity;0.0152414672762862!GO:0019210;kinase inhibitor activity;0.0153820623281314!GO:0030149;sphingolipid catabolic process;0.0153866174196987!GO:0003690;double-stranded DNA binding;0.0155612503077433!GO:0006644;phospholipid metabolic process;0.0157727115851072!GO:0002467;germinal center formation;0.0158284659413829!GO:0004860;protein kinase inhibitor activity;0.0159476810891593!GO:0016584;nucleosome positioning;0.0160570573007762!GO:0005905;coated pit;0.0161832411687424!GO:0008139;nuclear localization sequence binding;0.0165246066629546!GO:0045792;negative regulation of cell size;0.016607322956854!GO:0046489;phosphoinositide biosynthetic process;0.0166224549236644!GO:0045449;regulation of transcription;0.0168299184486408!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0170165052415862!GO:0001562;response to protozoan;0.0173804508779651!GO:0006914;autophagy;0.0173804508779651!GO:0019783;small conjugating protein-specific protease activity;0.0176887048056818!GO:0006968;cellular defense response;0.0177991997323616!GO:0030127;COPII vesicle coat;0.0178706243981819!GO:0012507;ER to Golgi transport vesicle membrane;0.0178706243981819!GO:0007162;negative regulation of cell adhesion;0.0179935533002436!GO:0006334;nucleosome assembly;0.01831083972946!GO:0022411;cellular component disassembly;0.0184143151675336!GO:0043022;ribosome binding;0.01861753901199!GO:0030308;negative regulation of cell growth;0.0188094899109406!GO:0048487;beta-tubulin binding;0.0190301752758909!GO:0030518;steroid hormone receptor signaling pathway;0.0190774643847862!GO:0002822;regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains.;0.0190838585384424!GO:0002819;regulation of adaptive immune response;0.0190838585384424!GO:0006338;chromatin remodeling;0.0201369518268831!GO:0001558;regulation of cell growth;0.0209352640334959!GO:0030968;unfolded protein response;0.0209352640334959!GO:0040029;regulation of gene expression, epigenetic;0.0213961033928014!GO:0016049;cell growth;0.0216269946027437!GO:0046966;thyroid hormone receptor binding;0.0216269946027437!GO:0050870;positive regulation of T cell activation;0.0218054011967699!GO:0030098;lymphocyte differentiation;0.0218740671506094!GO:0004843;ubiquitin-specific protease activity;0.0220982607503009!GO:0045926;negative regulation of growth;0.022099969670358!GO:0005791;rough endoplasmic reticulum;0.0221840060473622!GO:0006405;RNA export from nucleus;0.0228554598213006!GO:0030134;ER to Golgi transport vesicle;0.0231604827657837!GO:0051049;regulation of transport;0.0243317373282449!GO:0030125;clathrin vesicle coat;0.0243317373282449!GO:0030665;clathrin coated vesicle membrane;0.0243317373282449!GO:0002440;production of molecular mediator of immune response;0.0244279171976846!GO:0048500;signal recognition particle;0.0246374618112565!GO:0006516;glycoprotein catabolic process;0.0249729107767584!GO:0004177;aminopeptidase activity;0.0250588313152219!GO:0043407;negative regulation of MAP kinase activity;0.0255432832718539!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0262231103466015!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0262231103466015!GO:0042101;T cell receptor complex;0.0264242409428539!GO:0031098;stress-activated protein kinase signaling pathway;0.0265232504604717!GO:0002252;immune effector process;0.0276126253922026!GO:0045113;regulation of integrin biosynthetic process;0.0280051677405113!GO:0045112;integrin biosynthetic process;0.0280051677405113!GO:0008286;insulin receptor signaling pathway;0.0280218398543636!GO:0006665;sphingolipid metabolic process;0.0290261354831892!GO:0045603;positive regulation of endothelial cell differentiation;0.02907845576905!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.02907845576905!GO:0050900;leukocyte migration;0.0294854011150862!GO:0032774;RNA biosynthetic process;0.0295210210159964!GO:0004576;oligosaccharyl transferase activity;0.0296625774716824!GO:0006091;generation of precursor metabolites and energy;0.0296625774716824!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0298366157262226!GO:0008333;endosome to lysosome transport;0.0299862663815724!GO:0006351;transcription, DNA-dependent;0.0299927983083486!GO:0007006;mitochondrial membrane organization and biogenesis;0.0299927983083486!GO:0015036;disulfide oxidoreductase activity;0.0300515365970995!GO:0048002;antigen processing and presentation of peptide antigen;0.0302164245773608!GO:0002218;activation of innate immune response;0.0302164245773608!GO:0002758;innate immune response-activating signal transduction;0.0302164245773608!GO:0006354;RNA elongation;0.0302284973370719!GO:0045089;positive regulation of innate immune response;0.0302284973370719!GO:0045088;regulation of innate immune response;0.0302284973370719!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.0304278596338801!GO:0019882;antigen processing and presentation;0.0304278596338801!GO:0050811;GABA receptor binding;0.0304278596338801!GO:0004221;ubiquitin thiolesterase activity;0.0306864755940728!GO:0030503;regulation of cell redox homeostasis;0.0308332049736975!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0312200837019349!GO:0051051;negative regulation of transport;0.0314421371969608!GO:0000188;inactivation of MAPK activity;0.0317366881304679!GO:0006595;polyamine metabolic process;0.0321828086970251!GO:0046854;phosphoinositide phosphorylation;0.0321969669628161!GO:0005869;dynactin complex;0.0323674033375108!GO:0001772;immunological synapse;0.0324311888013024!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0326014663232365!GO:0045047;protein targeting to ER;0.0326014663232365!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0326157434326731!GO:0008250;oligosaccharyl transferase complex;0.0334589423415876!GO:0006013;mannose metabolic process;0.0337685086419582!GO:0030433;ER-associated protein catabolic process;0.0340403353326019!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0340403353326019!GO:0009611;response to wounding;0.0344173855902055!GO:0042832;defense response to protozoan;0.0347394436289299!GO:0008017;microtubule binding;0.0347548151850679!GO:0030119;AP-type membrane coat adaptor complex;0.0349832093407838!GO:0005669;transcription factor TFIID complex;0.0350511950608899!GO:0050871;positive regulation of B cell activation;0.0355698581535586!GO:0030155;regulation of cell adhesion;0.0355698581535586!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0355698581535586!GO:0006740;NADPH regeneration;0.0364929989156426!GO:0006098;pentose-phosphate shunt;0.0364929989156426!GO:0006661;phosphatidylinositol biosynthetic process;0.0364929989156426!GO:0000060;protein import into nucleus, translocation;0.0366760390958544!GO:0016859;cis-trans isomerase activity;0.0373915653502233!GO:0008610;lipid biosynthetic process;0.0382452401934037!GO:0048146;positive regulation of fibroblast proliferation;0.0383184406081788!GO:0006376;mRNA splice site selection;0.0383418066150062!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0383418066150062!GO:0045185;maintenance of protein localization;0.0383532649159266!GO:0045947;negative regulation of translational initiation;0.0385089554996494!GO:0045064;T-helper 2 cell differentiation;0.0389880842313768!GO:0043300;regulation of leukocyte degranulation;0.0394591218240451!GO:0048872;homeostasis of number of cells;0.0396526035626916!GO:0003702;RNA polymerase II transcription factor activity;0.0400617482496954!GO:0019377;glycolipid catabolic process;0.0400617482496954!GO:0032760;positive regulation of tumor necrosis factor production;0.0406076704549431!GO:0030377;U-plasminogen activator receptor activity;0.040684113404001!GO:0007254;JNK cascade;0.0407165972412767!GO:0015630;microtubule cytoskeleton;0.0411577937619348!GO:0050852;T cell receptor signaling pathway;0.0411577937619348!GO:0002682;regulation of immune system process;0.0413239651731115!GO:0002504;antigen processing and presentation of peptide or polysaccharide antigen via MHC class II;0.0415124013602134!GO:0005085;guanyl-nucleotide exchange factor activity;0.0415124013602134!GO:0003711;transcription elongation regulator activity;0.0419766759937642!GO:0009127;purine nucleoside monophosphate biosynthetic process;0.0420550171625096!GO:0009167;purine ribonucleoside monophosphate metabolic process;0.0420550171625096!GO:0009126;purine nucleoside monophosphate metabolic process;0.0420550171625096!GO:0009168;purine ribonucleoside monophosphate biosynthetic process;0.0420550171625096!GO:0004563;beta-N-acetylhexosaminidase activity;0.0423676929357772!GO:0006509;membrane protein ectodomain proteolysis;0.0425480523294022!GO:0033619;membrane protein proteolysis;0.0425480523294022!GO:0031301;integral to organelle membrane;0.042587118377092!GO:0032763;regulation of mast cell cytokine production;0.0426927741347282!GO:0032762;mast cell cytokine production;0.0426927741347282!GO:0004218;cathepsin S activity;0.0430104808991572!GO:0046456;icosanoid biosynthetic process;0.0430104808991572!GO:0030521;androgen receptor signaling pathway;0.0433702131191318!GO:0005762;mitochondrial large ribosomal subunit;0.0435809891720125!GO:0000315;organellar large ribosomal subunit;0.0435809891720125!GO:0045936;negative regulation of phosphate metabolic process;0.0435809891720125!GO:0017166;vinculin binding;0.0438109317259036!GO:0006926;virus-infected cell apoptosis;0.0446190992899178!GO:0030131;clathrin adaptor complex;0.0448345024011984!GO:0005062;hematopoietin/interferon-class (D200-domain) cytokine receptor signal transducer activity;0.0448725461133436!GO:0042325;regulation of phosphorylation;0.04490415117009!GO:0048144;fibroblast proliferation;0.0451336435683632!GO:0048145;regulation of fibroblast proliferation;0.0451336435683632!GO:0002224;toll-like receptor signaling pathway;0.0451336435683632!GO:0002221;pattern recognition receptor signaling pathway;0.0451336435683632!GO:0016505;apoptotic protease activator activity;0.0453859049178233!GO:0008283;cell proliferation;0.0462052314790729!GO:0044255;cellular lipid metabolic process;0.0462052314790729!GO:0045058;T cell selection;0.0462052314790729!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0463314956455143!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0463679390839586!GO:0046834;lipid phosphorylation;0.0477760081519446!GO:0051020;GTPase binding;0.0477948584583055!GO:0033239;negative regulation of amine metabolic process;0.0478236127722682!GO:0045763;negative regulation of amino acid metabolic process;0.0478236127722682!GO:0001933;negative regulation of protein amino acid phosphorylation;0.0478236127722682!GO:0003682;chromatin binding;0.0481032713699795!GO:0031647;regulation of protein stability;0.0484021916687012!GO:0008276;protein methyltransferase activity;0.0489427814338034!GO:0005684;U2-dependent spliceosome;0.0492529897845816!GO:0032507;maintenance of cellular protein localization;0.049614977592!GO:0006310;DNA recombination;0.0496344365746967!GO:0008656;caspase activator activity;0.0499375870626372 | |||
|sample_id=11224 | |sample_id=11224 | ||
|sample_note=machine failed, remainder reloaded, low amount | |sample_note=machine failed, remainder reloaded, low amount | ||
| Line 76: | Line 106: | ||
|sample_tissue=blood | |sample_tissue=blood | ||
|top_motifs=NFKB1_REL_RELA:5.20111330288;FOS_FOS{B,L1}_JUN{B,D}:4.99137822902;BACH2:4.98649943902;PAX3,7:4.93922810447;FOSL2:4.73122190829;PAX2:4.60488025566;NFE2:4.6032202759;NFIL3:4.43052605432;RUNX1..3:3.60977922241;CEBPA,B_DDIT3:3.5862094667;SPIB:3.58334586612;HLF:3.47788293066;ETS1,2:3.45762786239;CREB1:3.43269567831;ATF5_CREB3:3.35067726582;SPI1:3.34858486843;NFE2L2:3.32086707986;ATF4:3.02797519793;DMAP1_NCOR{1,2}_SMARC:2.89504832739;NFATC1..3:2.8889377524;TGIF1:2.81461366407;HMGA1,2:2.67205762209;IRF1,2:2.59656277515;FOXP3:2.55898322006;JUN:2.54321098973;RXRA_VDR{dimer}:2.47942754302;FOXN1:2.33868253909;STAT2,4,6:2.27401737425;IRF7:2.24850842036;PAX8:2.1730366823;FOXO1,3,4:2.02035586908;ATF2:1.90509779592;BPTF:1.69587965645;ELF1,2,4:1.66903046797;NANOG{mouse}:1.65148663307;NFE2L1:1.60609359846;MAFB:1.57781336507;SREBF1,2:1.54308457117;FOX{D1,D2}:1.50113502462;RFX2..5_RFXANK_RFXAP:1.49879035635;ATF6:1.4449086637;RORA:1.43700389136;HOXA9_MEIS1:1.29041009157;FOXP1:1.09904417529;HSF1,2:1.0791149432;EP300:0.981875143626;NANOG:0.917020382605;NKX2-1,4:0.892073137455;HIF1A:0.890544635324;T:0.816095716153;PDX1:0.530547355441;RBPJ:0.519768281484;HMX1:0.502087562498;HBP1_HMGB_SSRP1_UBTF:0.467256631114;PITX1..3:0.379446414851;ALX4:0.376655829428;GLI1..3:0.306565021745;HOX{A5,B5}:0.282547601332;XBP1:0.278226197189;EGR1..3:0.25087619499;MEF2{A,B,C,D}:0.215555009195;SMAD1..7,9:0.195303985216;SOX2:0.133459604334;SRF:0.0977872613699;TBX4,5:0.020315704756;BREu{core}:-0.0442718870034;RXR{A,B,G}:-0.0571184001155;POU2F1..3:-0.112922929075;GATA4:-0.214787493221;ZBTB16:-0.226706865266;IKZF1:-0.232214069807;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.249067841013;NR3C1:-0.253688595469;POU5F1:-0.255557627988;STAT5{A,B}:-0.345450755453;AHR_ARNT_ARNT2:-0.38544295757;VSX1,2:-0.461334745888;STAT1,3:-0.490741339471;CDX1,2,4:-0.493493206317;FOXL1:-0.497961599052;ZNF238:-0.531306360694;TFDP1:-0.541616203946;NKX3-1:-0.542656794189;EN1,2:-0.547844710922;TFCP2:-0.576378241828;MYB:-0.584239591876;FOX{F1,F2,J1}:-0.594788965925;MTE{core}:-0.610608995621;ZNF384:-0.625487346407;TBP:-0.674703098221;TLX2:-0.713643464548;IKZF2:-0.725109124405;TEF:-0.747428355844;RFX1:-0.7661834585;TFAP2{A,C}:-0.815304944304;OCT4_SOX2{dimer}:-0.844223370341;NR1H4:-0.866553630201;TFAP2B:-0.878312344752;GATA6:-0.881280695729;NHLH1,2:-0.896936766948;ESR1:-0.898690376804;ZFP161:-0.913944685913;MED-1{core}:-0.942664469025;ESRRA:-0.985409656699;SP1:-1.00485954731;PRRX1,2:-1.0207917951;FOXA2:-1.03490910287;FOX{I1,J2}:-1.03719876129;MZF1:-1.04971539974;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.07774871136;NKX2-3_NKX2-5:-1.08616133908;PAX6:-1.1122350698;PPARG:-1.13942942341;TAL1_TCF{3,4,12}:-1.17927158884;GCM1,2:-1.19186325444;TFAP4:-1.22329438424;PRDM1:-1.22850651564;NKX6-1,2:-1.23284162358;E2F1..5:-1.25879029475;PATZ1:-1.25978569145;CRX:-1.26091761069;MYFfamily:-1.29740209201;DBP:-1.31126465691;NR5A1,2:-1.31560492323;FOXM1:-1.3195428124;ADNP_IRX_SIX_ZHX:-1.32740426228;HNF1A:-1.33247001416;HNF4A_NR2F1,2:-1.39003812445;PAX1,9:-1.40302676351;HES1:-1.41653110666;NR6A1:-1.42594776006;SOX5:-1.42720658199;POU3F1..4:-1.43984329647;CUX2:-1.47495498032;PAX4:-1.51336833771;REST:-1.51532624724;MAZ:-1.53056777399;MYBL2:-1.5386407075;HIC1:-1.58482042566;SOX{8,9,10}:-1.59390892506;MTF1:-1.62116176555;GTF2A1,2:-1.63658389727;TP53:-1.67719676783;TEAD1:-1.68285507803;HOX{A4,D4}:-1.69985111178;ALX1:-1.7356453207;ZNF148:-1.73910992226;NFY{A,B,C}:-1.75049026623;GTF2I:-1.79386042912;ZEB1:-1.81424862702;HOX{A6,A7,B6,B7}:-1.93585777892;TLX1..3_NFIC{dimer}:-1.96563778025;RREB1:-1.97019901905;PAX5:-1.97893400361;PBX1:-1.9970570535;EBF1:-2.01757283439;LEF1_TCF7_TCF7L1,2:-2.04499355901;TOPORS:-2.05375463138;XCPE1{core}:-2.12699586933;ELK1,4_GABP{A,B1}:-2.13912557194;MYOD1:-2.15956650476;GFI1B:-2.19749782695;ZIC1..3:-2.28646041987;SNAI1..3:-2.31298077321;CDC5L:-2.35569223639;LHX3,4:-2.37253882826;SPZ1:-2.3783742361;SOX17:-2.41303765227;NRF1:-2.41383141429;FOXD3:-2.42992958983;AIRE:-2.43570392888;GZF1:-2.44190599247;POU6F1:-2.44267519311;ZBTB6:-2.51405207452;GFI1:-2.60346815896;NFIX:-2.64726535853;FOXQ1:-2.6554117954;ZNF423:-2.73944548611;bHLH_family:-2.87391455435;NKX2-2,8:-2.9034588115;AR:-2.90586158698;LMO2:-2.95524511272;KLF4:-3.02283021346;EVI1:-3.30326000345;ZNF143:-3.40469476102;ARID5B:-3.65006977373;ONECUT1,2:-3.67438967688;UFEwm:-3.72056476276;YY1:-3.73929141443;POU1F1:-3.79807180336;NKX3-2:-3.84707494243;HAND1,2:-4.76387766823 | |top_motifs=NFKB1_REL_RELA:5.20111330288;FOS_FOS{B,L1}_JUN{B,D}:4.99137822902;BACH2:4.98649943902;PAX3,7:4.93922810447;FOSL2:4.73122190829;PAX2:4.60488025566;NFE2:4.6032202759;NFIL3:4.43052605432;RUNX1..3:3.60977922241;CEBPA,B_DDIT3:3.5862094667;SPIB:3.58334586612;HLF:3.47788293066;ETS1,2:3.45762786239;CREB1:3.43269567831;ATF5_CREB3:3.35067726582;SPI1:3.34858486843;NFE2L2:3.32086707986;ATF4:3.02797519793;DMAP1_NCOR{1,2}_SMARC:2.89504832739;NFATC1..3:2.8889377524;TGIF1:2.81461366407;HMGA1,2:2.67205762209;IRF1,2:2.59656277515;FOXP3:2.55898322006;JUN:2.54321098973;RXRA_VDR{dimer}:2.47942754302;FOXN1:2.33868253909;STAT2,4,6:2.27401737425;IRF7:2.24850842036;PAX8:2.1730366823;FOXO1,3,4:2.02035586908;ATF2:1.90509779592;BPTF:1.69587965645;ELF1,2,4:1.66903046797;NANOG{mouse}:1.65148663307;NFE2L1:1.60609359846;MAFB:1.57781336507;SREBF1,2:1.54308457117;FOX{D1,D2}:1.50113502462;RFX2..5_RFXANK_RFXAP:1.49879035635;ATF6:1.4449086637;RORA:1.43700389136;HOXA9_MEIS1:1.29041009157;FOXP1:1.09904417529;HSF1,2:1.0791149432;EP300:0.981875143626;NANOG:0.917020382605;NKX2-1,4:0.892073137455;HIF1A:0.890544635324;T:0.816095716153;PDX1:0.530547355441;RBPJ:0.519768281484;HMX1:0.502087562498;HBP1_HMGB_SSRP1_UBTF:0.467256631114;PITX1..3:0.379446414851;ALX4:0.376655829428;GLI1..3:0.306565021745;HOX{A5,B5}:0.282547601332;XBP1:0.278226197189;EGR1..3:0.25087619499;MEF2{A,B,C,D}:0.215555009195;SMAD1..7,9:0.195303985216;SOX2:0.133459604334;SRF:0.0977872613699;TBX4,5:0.020315704756;BREu{core}:-0.0442718870034;RXR{A,B,G}:-0.0571184001155;POU2F1..3:-0.112922929075;GATA4:-0.214787493221;ZBTB16:-0.226706865266;IKZF1:-0.232214069807;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.249067841013;NR3C1:-0.253688595469;POU5F1:-0.255557627988;STAT5{A,B}:-0.345450755453;AHR_ARNT_ARNT2:-0.38544295757;VSX1,2:-0.461334745888;STAT1,3:-0.490741339471;CDX1,2,4:-0.493493206317;FOXL1:-0.497961599052;ZNF238:-0.531306360694;TFDP1:-0.541616203946;NKX3-1:-0.542656794189;EN1,2:-0.547844710922;TFCP2:-0.576378241828;MYB:-0.584239591876;FOX{F1,F2,J1}:-0.594788965925;MTE{core}:-0.610608995621;ZNF384:-0.625487346407;TBP:-0.674703098221;TLX2:-0.713643464548;IKZF2:-0.725109124405;TEF:-0.747428355844;RFX1:-0.7661834585;TFAP2{A,C}:-0.815304944304;OCT4_SOX2{dimer}:-0.844223370341;NR1H4:-0.866553630201;TFAP2B:-0.878312344752;GATA6:-0.881280695729;NHLH1,2:-0.896936766948;ESR1:-0.898690376804;ZFP161:-0.913944685913;MED-1{core}:-0.942664469025;ESRRA:-0.985409656699;SP1:-1.00485954731;PRRX1,2:-1.0207917951;FOXA2:-1.03490910287;FOX{I1,J2}:-1.03719876129;MZF1:-1.04971539974;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.07774871136;NKX2-3_NKX2-5:-1.08616133908;PAX6:-1.1122350698;PPARG:-1.13942942341;TAL1_TCF{3,4,12}:-1.17927158884;GCM1,2:-1.19186325444;TFAP4:-1.22329438424;PRDM1:-1.22850651564;NKX6-1,2:-1.23284162358;E2F1..5:-1.25879029475;PATZ1:-1.25978569145;CRX:-1.26091761069;MYFfamily:-1.29740209201;DBP:-1.31126465691;NR5A1,2:-1.31560492323;FOXM1:-1.3195428124;ADNP_IRX_SIX_ZHX:-1.32740426228;HNF1A:-1.33247001416;HNF4A_NR2F1,2:-1.39003812445;PAX1,9:-1.40302676351;HES1:-1.41653110666;NR6A1:-1.42594776006;SOX5:-1.42720658199;POU3F1..4:-1.43984329647;CUX2:-1.47495498032;PAX4:-1.51336833771;REST:-1.51532624724;MAZ:-1.53056777399;MYBL2:-1.5386407075;HIC1:-1.58482042566;SOX{8,9,10}:-1.59390892506;MTF1:-1.62116176555;GTF2A1,2:-1.63658389727;TP53:-1.67719676783;TEAD1:-1.68285507803;HOX{A4,D4}:-1.69985111178;ALX1:-1.7356453207;ZNF148:-1.73910992226;NFY{A,B,C}:-1.75049026623;GTF2I:-1.79386042912;ZEB1:-1.81424862702;HOX{A6,A7,B6,B7}:-1.93585777892;TLX1..3_NFIC{dimer}:-1.96563778025;RREB1:-1.97019901905;PAX5:-1.97893400361;PBX1:-1.9970570535;EBF1:-2.01757283439;LEF1_TCF7_TCF7L1,2:-2.04499355901;TOPORS:-2.05375463138;XCPE1{core}:-2.12699586933;ELK1,4_GABP{A,B1}:-2.13912557194;MYOD1:-2.15956650476;GFI1B:-2.19749782695;ZIC1..3:-2.28646041987;SNAI1..3:-2.31298077321;CDC5L:-2.35569223639;LHX3,4:-2.37253882826;SPZ1:-2.3783742361;SOX17:-2.41303765227;NRF1:-2.41383141429;FOXD3:-2.42992958983;AIRE:-2.43570392888;GZF1:-2.44190599247;POU6F1:-2.44267519311;ZBTB6:-2.51405207452;GFI1:-2.60346815896;NFIX:-2.64726535853;FOXQ1:-2.6554117954;ZNF423:-2.73944548611;bHLH_family:-2.87391455435;NKX2-2,8:-2.9034588115;AR:-2.90586158698;LMO2:-2.95524511272;KLF4:-3.02283021346;EVI1:-3.30326000345;ZNF143:-3.40469476102;ARID5B:-3.65006977373;ONECUT1,2:-3.67438967688;UFEwm:-3.72056476276;YY1:-3.73929141443;POU1F1:-3.79807180336;NKX3-2:-3.84707494243;HAND1,2:-4.76387766823 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11224-116B9;search_select_hide=table117:FF:11224-116B9 | |||
}} | }} | ||
Latest revision as of 16:25, 3 June 2020
| Name: | CD14+ Monocytes, donor1 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs10852 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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| Download raw sequence, BAM & CTSS | ||||||||||||||
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| HumanCAGEScan Download raw sequence, BAM & CTSS | ||||||||||||||||||
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| RNA-Seq Accession numbers | ||||||||||||||||||||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs10852
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs10852
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.31 |
| 10 | 10 | 0.0233 |
| 100 | 100 | 0.766 |
| 101 | 101 | 0.946 |
| 102 | 102 | 0.827 |
| 103 | 103 | 0.603 |
| 104 | 104 | 0.452 |
| 105 | 105 | 0.0501 |
| 106 | 106 | 0.00146 |
| 107 | 107 | 0.322 |
| 108 | 108 | 0.492 |
| 109 | 109 | 0.476 |
| 11 | 11 | 0.445 |
| 110 | 110 | 0.354 |
| 111 | 111 | 0.13 |
| 112 | 112 | 0.651 |
| 113 | 113 | 0.176 |
| 114 | 114 | 0.145 |
| 115 | 115 | 0.0813 |
| 116 | 116 | 0.798 |
| 117 | 117 | 0.0989 |
| 118 | 118 | 0.224 |
| 119 | 119 | 0.512 |
| 12 | 12 | 0.241 |
| 120 | 120 | 0.354 |
| 121 | 121 | 0.629 |
| 122 | 122 | 0.604 |
| 123 | 123 | 0.0112 |
| 124 | 124 | 0.861 |
| 125 | 125 | 0.375 |
| 126 | 126 | 0.263 |
| 127 | 127 | 0.825 |
| 128 | 128 | 0.11 |
| 129 | 129 | 0.846 |
| 13 | 13 | 0.125 |
| 130 | 130 | 0.33 |
| 131 | 131 | 0.835 |
| 132 | 132 | 0.0528 |
| 133 | 133 | 0.595 |
| 134 | 134 | 0.857 |
| 135 | 135 | 0.679 |
| 136 | 136 | 0.897 |
| 137 | 137 | 0.0164 |
| 138 | 138 | 0.34 |
| 139 | 139 | 0.0711 |
| 14 | 14 | 0.363 |
| 140 | 140 | 0.583 |
| 141 | 141 | 0.464 |
| 142 | 142 | 0.198 |
| 143 | 143 | 0.0294 |
| 144 | 144 | 0.607 |
| 145 | 145 | 0.533 |
| 146 | 146 | 0.954 |
| 147 | 147 | 0.619 |
| 148 | 148 | 0.069 |
| 149 | 149 | 0.74 |
| 15 | 15 | 0.166 |
| 150 | 150 | 0.548 |
| 151 | 151 | 0.219 |
| 152 | 152 | 0.345 |
| 153 | 153 | 0.861 |
| 154 | 154 | 0.545 |
| 155 | 155 | 0.637 |
| 156 | 156 | 0.64 |
| 157 | 157 | 0.724 |
| 158 | 158 | 0.0606 |
| 159 | 159 | 0.122 |
| 16 | 16 | 0.803 |
| 160 | 160 | 0.934 |
| 161 | 161 | 0.823 |
| 162 | 162 | 0.116 |
| 163 | 163 | 0.13 |
| 164 | 164 | 0.0859 |
| 165 | 165 | 0.291 |
| 166 | 166 | 0.7 |
| 167 | 167 | 0.267 |
| 168 | 168 | 0.0688 |
| 169 | 169 | 0.109 |
| 17 | 17 | 0.395 |
| 18 | 18 | 0.253 |
| 19 | 19 | 0.969 |
| 2 | 2 | 0.278 |
| 20 | 20 | 0.278 |
| 21 | 21 | 0.903 |
| 22 | 22 | 0.485 |
| 23 | 23 | 0.0509 |
| 24 | 24 | 0.667 |
| 25 | 25 | 0.393 |
| 26 | 26 | 0.129 |
| 27 | 27 | 0.41 |
| 28 | 28 | 0.412 |
| 29 | 29 | 0.31 |
| 3 | 3 | 0.301 |
| 30 | 30 | 0.234 |
| 31 | 31 | 0.832 |
| 32 | 32 | 0.106 |
| 33 | 33 | 0.27 |
| 34 | 34 | 0.685 |
| 35 | 35 | 0.163 |
| 36 | 36 | 0.0666 |
| 37 | 37 | 0.155 |
| 38 | 38 | 0.41 |
| 39 | 39 | 0.769 |
| 4 | 4 | 0.754 |
| 40 | 40 | 0.176 |
| 41 | 41 | 0.00808 |
| 42 | 42 | 0.451 |
| 43 | 43 | 0.0276 |
| 44 | 44 | 0.278 |
| 45 | 45 | 0.921 |
| 46 | 46 | 0.408 |
| 47 | 47 | 0.984 |
| 48 | 48 | 0.844 |
| 49 | 49 | 0.11 |
| 5 | 5 | 0.244 |
| 50 | 50 | 0.979 |
| 51 | 51 | 0.537 |
| 52 | 52 | 0.464 |
| 53 | 53 | 0.235 |
| 54 | 54 | 0.596 |
| 55 | 55 | 0.93 |
| 56 | 56 | 0.934 |
| 57 | 57 | 0.897 |
| 58 | 58 | 0.242 |
| 59 | 59 | 0.599 |
| 6 | 6 | 0.955 |
| 60 | 60 | 0.086 |
| 61 | 61 | 0.51 |
| 62 | 62 | 0.169 |
| 63 | 63 | 0.655 |
| 64 | 64 | 0.591 |
| 65 | 65 | 0.273 |
| 66 | 66 | 0.0948 |
| 67 | 67 | 0.644 |
| 68 | 68 | 0.286 |
| 69 | 69 | 0.225 |
| 7 | 7 | 0.263 |
| 70 | 70 | 0.0969 |
| 71 | 71 | 0.0504 |
| 72 | 72 | 0.234 |
| 73 | 73 | 0.238 |
| 74 | 74 | 0.0289 |
| 75 | 75 | 0.264 |
| 76 | 76 | 0.0689 |
| 77 | 77 | 0.921 |
| 78 | 78 | 0.304 |
| 79 | 79 | 0.75 |
| 8 | 8 | 0.978 |
| 80 | 80 | 0.0832 |
| 81 | 81 | 0.368 |
| 82 | 82 | 0.335 |
| 83 | 83 | 0.163 |
| 84 | 84 | 0.0436 |
| 85 | 85 | 0.137 |
| 86 | 86 | 0.0545 |
| 87 | 87 | 0.57 |
| 88 | 88 | 0.833 |
| 89 | 89 | 0.887 |
| 9 | 9 | 0.428 |
| 90 | 90 | 0.292 |
| 91 | 91 | 0.259 |
| 92 | 92 | 0.42 |
| 93 | 93 | 0.621 |
| 94 | 94 | 0.0964 |
| 95 | 95 | 0.312 |
| 96 | 96 | 0.479 |
| 97 | 97 | 0.611 |
| 98 | 98 | 0.118 |
| 99 | 99 | 0.00815 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs10852
FANTOM5 (FF) ontology
Direct parent terms
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0000763 (myeloid cell)
0002371 (somatic cell)
0000766 (myeloid leukocyte)
0000219 (motile cell)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0000255 (eukaryotic cell)
0000576 (monocyte)
0002393 (intermediate monocyte)
0002397 (CD14-positive, CD16-positive monocyte)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000024 (human CD14-positive monocyte sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000049 (common myeloid progenitor)
CL:0000134 (mesenchymal cell)
CL:0002057 (CD14-positive, CD16-negative classical monocyte)
