FFCP PHASE1:Hg19::chr2:74669504..74669520,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6242 | |EntrezGene=6242 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10466 | |HGNC=10466 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=25bp_to_ENST00000484453_5end | |association_with_transcript=25bp_to_ENST00000484453_5end | ||
|cluster_id=chr2:74669504..74669520,- | |||
|coexpression_cluster_id=C55 | |coexpression_cluster_id=C55 | ||
|description=CAGE_peak_9_at_RTKN_5end | |description=CAGE_peak_9_at_RTKN_5end | ||
|id=chr2:74669504..74669520,- | |id=chr2:74669504..74669520,- | ||
|ontology_enrichment_celltype=CL:0000066!4.18e-12!254;CL:0000223!1.16e-09!59;CL:1000497!9.59e-09!18;CL:0002518!9.59e-09!18;CL:1000449!1.68e-08!16;CL:1000507!8.97e-08!12;CL:1000494!8.97e-08!12;CL:0002322!4.13e-07!5;CL:0002681!7.86e-07!13;CL:0002584!7.86e-07!13 | |ontology_enrichment_celltype=CL:0000066!4.18e-12!254;CL:0000223!1.16e-09!59;CL:1000497!9.59e-09!18;CL:0002518!9.59e-09!18;CL:1000449!1.68e-08!16;CL:1000507!8.97e-08!12;CL:1000494!8.97e-08!12;CL:0002322!4.13e-07!5;CL:0002681!7.86e-07!13;CL:0002584!7.86e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.85e-30;12!CL:1000449;8.52e-11;15!CL:0002563;9.41e-11;4!CL:1000497;1.50e-09;17!CL:0002518;1.50e-09;17!CL:1000507;2.14e-09;10!CL:1000494;2.14e-09;10!CL:0002681;5.10e-08;12!CL:0002584;5.10e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.64e-30,12;CL:0000223,6.90e-13,58;CL:1000449,8.31e-11,15;CL:0002563,8.96e-11,4;CL:1000497,1.47e-09,17;CL:0002518,1.47e-09,17;CL:1000507,2.11e-09,10;CL:1000494,2.11e-09,10;CL:0002681,4.81e-08,12;CL:0002584,4.81e-08,12 | |||
|ontology_enrichment_development_v019=UBERON:0003104;1.85e-15;31!UBERON:0004161;2.70e-15;11!UBERON:0009497;5.62e-13;13!CL:0000223;5.55e-09;58 | |||
|ontology_enrichment_disease=DOID:305!7.07e-07!106 | |ontology_enrichment_disease=DOID:305!7.07e-07!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002107;1.07e-25;19!UBERON:0006925;1.07e-25;19!UBERON:0005172;4.91e-21;52!UBERON:0005173;4.91e-21;52!UBERON:0002423;2.21e-19;25!UBERON:0002417;6.43e-18;58!UBERON:0000916;6.43e-18;58!UBERON:0002368;1.27e-16;33!UBERON:0002365;3.30e-15;31!UBERON:0002330;3.30e-15;31!UBERON:0002113;1.84e-14;24!UBERON:0011143;1.84e-14;24!UBERON:0000949;3.44e-13;43!UBERON:0000489;6.65e-12;29!UBERON:0006554;1.71e-11;30!UBERON:0001008;1.71e-11;30!UBERON:0001851;8.52e-11;15!UBERON:0006555;8.52e-11;15!UBERON:0004819;8.52e-11;15!UBERON:0001285;8.52e-11;15!UBERON:0007684;8.52e-11;15!UBERON:0001242;9.41e-11;4!UBERON:0001262;9.41e-11;4!UBERON:0004786;9.41e-11;4!UBERON:0004808;9.41e-11;4!UBERON:0001277;9.41e-11;4!UBERON:0004211;2.14e-09;10!UBERON:0009773;2.14e-09;10!UBERON:0001231;2.14e-09;10!UBERON:0004810;2.14e-09;10!UBERON:0002530;4.49e-09;57!UBERON:0001225;5.10e-08;12!UBERON:0008987;5.10e-08;12!UBERON:0001007;8.15e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,3.02e-34,54;UBERON:0005173,3.02e-34,54;UBERON:0002417,1.28e-30,60;UBERON:0000916,1.28e-30,60;UBERON:0002107,1.01e-25,19;UBERON:0006925,1.01e-25,19;UBERON:0008836,1.01e-25,19;UBERON:0008835,3.94e-22,22;UBERON:0003894,3.94e-22,22;UBERON:0009854,3.84e-21,23;UBERON:0007499,2.12e-19,25;UBERON:0009497,2.12e-19,25;UBERON:0000015,2.12e-19,25;UBERON:0002423,2.12e-19,25;UBERON:0006235,2.12e-19,25;UBERON:0004161,2.12e-19,25;UBERON:0009856,1.25e-18,26;UBERON:0002368,1.05e-17,35;UBERON:0005177,2.45e-17,101;UBERON:0003929,2.84e-17,54;UBERON:0002365,1.62e-15,31;UBERON:0002330,1.62e-15,31;UBERON:0009569,2.01e-15,112;UBERON:0003104,1.37e-13,160;UBERON:0009142,1.37e-13,160;UBERON:0000949,1.46e-13,45;UBERON:0002113,2.84e-13,26;UBERON:0003918,2.84e-13,26;UBERON:0011143,2.84e-13,26;UBERON:0005095,2.84e-13,26;UBERON:0007687,2.84e-13,26;UBERON:0002530,9.74e-13,59;UBERON:0000489,4.54e-11,31;UBERON:0005911,6.89e-11,82;UBERON:0001851,7.30e-11,15;UBERON:0004211,8.31e-11,15;UBERON:0009773,8.31e-11,15;UBERON:0001231,8.31e-11,15;UBERON:0001285,8.31e-11,15;UBERON:0007684,8.31e-11,15;UBERON:0004208,8.31e-11,15;UBERON:0001242,8.96e-11,4;UBERON:0001262,8.96e-11,4;UBERON:0004786,8.96e-11,4;UBERON:0004808,8.96e-11,4;UBERON:0001277,8.96e-11,4;UBERON:0006555,3.82e-10,16;UBERON:0004819,3.82e-10,16;UBERON:0006554,1.36e-09,47;UBERON:0004810,2.11e-09,10;UBERON:0001008,2.23e-09,48;UBERON:0002100,5.12e-09,199;UBERON:0003914,8.30e-09,117;UBERON:0001225,4.81e-08,12;UBERON:0008987,4.81e-08,12;UBERON:0004921,4.75e-07,118;UBERON:0005256,6.98e-07,122 | |||
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|short_description=p9@RTKN | |short_description=p9@RTKN | ||
}} | }} |
Latest revision as of 11:04, 18 September 2015
Short description: | p9@RTKN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_RTKN_5end |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | 25bp_to_ENST00000484453_5end |
EntrezGene: | RTKN |
HGNC: | 10466 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.64e-30 | 12 |
endodermal cell | 6.90e-13 | 58 |
epithelial cell of nephron | 8.31e-11 | 15 |
intestinal epithelial cell | 8.96e-11 | 4 |
kidney cell | 1.47e-09 | 17 |
kidney epithelial cell | 1.47e-09 | 17 |
kidney tubule cell | 2.11e-09 | 10 |
nephron tubule epithelial cell | 2.11e-09 | 10 |
kidney cortical cell | 4.81e-08 | 12 |
renal cortical epithelial cell | 4.81e-08 | 12 |