FFCP PHASE1:Hg19::chr19:1300274..1300279,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:1300274..1300279,+
|short_description=p@chr19:1300274..1300279,+
|description=CAGE_peak_at_chr19:1300274..1300279,+
|association_with_transcript=NA
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:1300274..1300279,+ | |||
|description=CAGE_peak_at_chr19:1300274..1300279,+ | |||
|id=chr19:1300274..1300279,+ | |||
|ontology_enrichment_celltype=CL:0002319!6.13e-12!25;CL:0000066!2.68e-10!254;CL:0000095!6.30e-08!17;CL:0000123!6.30e-08!17;CL:0000133!1.87e-07!59;CL:0000243!5.38e-07!15;CL:0000125!5.38e-07!15;CL:0000030!5.38e-07!15;CL:0000339!5.38e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0002319;2.54e-18;25!CL:0000095;1.15e-11;17!CL:0000540;1.41e-11;6!CL:0000404;1.41e-11;6!CL:0000243;2.84e-11;15!CL:0000125;2.84e-11;15!CL:0002322;7.21e-10;5!CL:0000128;6.98e-08;7!CL:0000126;6.98e-08;7!CL:0000127;6.98e-08;7!CL:0000039;2.46e-07;7!CL:0000586;2.46e-07;7!CL:0000306;2.48e-07;4!CL:0002222;2.48e-07;4!CL:0002224;2.48e-07;4!CL:0000182;6.14e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,3.02e-18,25;CL:0000133,1.51e-14,59;CL:0000095,1.35e-11,17;CL:0000123,1.35e-11,17;CL:0000540,1.43e-11,6;CL:0000031,1.43e-11,6;CL:0000404,1.43e-11,6;CL:0000243,3.32e-11,15;CL:0000125,3.32e-11,15;CL:0000030,3.32e-11,15;CL:0000339,3.32e-11,15;CL:0000221,1.36e-10,72;CL:0002322,7.14e-10,5;CL:0000333,3.94e-09,41;CL:0000047,2.11e-08,8;CL:0000128,7.70e-08,7;CL:0000126,7.70e-08,7;CL:0000127,7.70e-08,7;CL:0002453,7.70e-08,7;CL:0000039,2.38e-07,7;CL:0000586,2.38e-07,7;CL:0000306,3.51e-07,4;CL:0002222,3.51e-07,4;CL:0002224,3.51e-07,4;CL:0000182,6.66e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000031;1.41e-11;6!CL:0000339;2.84e-11;15!UBERON:0006238;1.63e-08;10!CL:0000133;4.21e-08;59!UBERON:0009497;1.20e-07;13!UBERON:0004161;2.04e-07;11!UBERON:0003104;2.24e-07;31 | |||
|ontology_enrichment_disease=DOID:0050687!2.48e-13!143;DOID:305!3.30e-11!106;DOID:162!1.84e-07!235;DOID:14566!8.97e-07!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!7.99e-26!86;UBERON:0000073!4.66e-24!94;UBERON:0001016!4.66e-24!94;UBERON:0001017!9.40e-24!82;UBERON:0003075!1.17e-20!86;UBERON:0007284!1.17e-20!86;UBERON:0002346!1.23e-19!90;UBERON:0000955!5.34e-18!69;UBERON:0006238!5.34e-18!69;UBERON:0001049!2.14e-16!57;UBERON:0005068!2.14e-16!57;UBERON:0006241!2.14e-16!57;UBERON:0007135!2.14e-16!57;UBERON:0003056!8.62e-16!61;UBERON:0004121!8.68e-16!169;UBERON:0000924!2.34e-15!173;UBERON:0006601!2.34e-15!173;UBERON:0000033!1.21e-14!123;UBERON:0000153!7.37e-14!129;UBERON:0007811!7.37e-14!129;UBERON:0001893!2.21e-13!34;UBERON:0002791!4.85e-13!33;UBERON:0002020!5.90e-13!34;UBERON:0003528!5.90e-13!34;UBERON:0001869!9.98e-13!32;UBERON:0002616!1.27e-12!59;UBERON:0002780!2.36e-12!41;UBERON:0001890!2.36e-12!41;UBERON:0006240!2.36e-12!41;UBERON:0003080!8.90e-12!42;UBERON:0000956!2.12e-10!25;UBERON:0000203!2.12e-10!25;UBERON:0000064!3.65e-10!219;UBERON:0001950!4.00e-09!20;UBERON:0007625!5.93e-09!11;UBERON:0002619!9.71e-09!22;UBERON:0000481!1.10e-08!347;UBERON:0000160!1.66e-08!27;UBERON:0005409!1.76e-08!35;UBERON:0000922!5.99e-08!612;UBERON:0004921!6.86e-08!129;UBERON:0004185!6.86e-08!129;UBERON:0000062!9.00e-08!511;UBERON:0000063!9.37e-08!97 | |||
|ontology_enrichment_uberon_v019=UBERON:0007625;2.29e-16;11!UBERON:0000160;4.03e-14;17!UBERON:0005409;7.45e-12;22!UBERON:0000970;2.45e-11;20!UBERON:0000922;3.39e-11;49!UBERON:0002104;1.23e-10;21!UBERON:0000019;3.48e-10;19!UBERON:0000047;3.48e-10;19!UBERON:0004088;3.48e-10;19!UBERON:0010230;3.48e-10;19!UBERON:0002108;1.59e-09;4!UBERON:0000020;2.00e-09;23!UBERON:0002423;5.31e-09;25!UBERON:0001456;6.21e-09;21!UBERON:0001032;6.73e-09;24!UBERON:0004456;6.73e-09;24!UBERON:0010077;2.48e-07;4!UBERON:0005389;2.48e-07;4!UBERON:0000484;2.48e-07;4!UBERON:0000965;2.48e-07;4!UBERON:0001803;2.48e-07;4!UBERON:0000488;3.14e-07;4!UBERON:0000059;8.14e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,2.79e-16,11;UBERON:0000160,2.47e-14,17;UBERON:0000970,1.43e-10,21;UBERON:0002104,1.43e-10,21;UBERON:0011216,2.31e-10,223;UBERON:0005409,3.29e-10,25;UBERON:0001017,4.10e-10,81;UBERON:0001016,5.60e-10,89;UBERON:0002108,1.61e-09,4;UBERON:0000019,1.81e-09,20;UBERON:0000047,1.81e-09,20;UBERON:0010312,1.81e-09,20;UBERON:0004088,1.81e-09,20;UBERON:0010230,1.81e-09,20;UBERON:0003072,1.81e-09,20;UBERON:0004128,1.81e-09,20;UBERON:0003071,1.81e-09,20;UBERON:0009497,5.89e-09,25;UBERON:0000015,5.89e-09,25;UBERON:0002423,5.89e-09,25;UBERON:0006235,5.89e-09,25;UBERON:0004161,5.89e-09,25;UBERON:0003056,7.57e-09,61;UBERON:0000020,7.67e-09,24;UBERON:0001032,7.67e-09,24;UBERON:0004456,7.67e-09,24;UBERON:0009856,1.86e-08,26;UBERON:0009854,1.98e-08,23;UBERON:0001456,2.41e-08,22;UBERON:0003075,5.08e-08,82;UBERON:0007284,5.08e-08,82;UBERON:0002346,5.12e-08,86;UBERON:0004121,1.13e-07,171;UBERON:0000924,1.13e-07,171;UBERON:0006601,1.13e-07,171;UBERON:0007499,1.39e-07,25;UBERON:0008835,1.60e-07,22;UBERON:0003894,1.60e-07,22;UBERON:0000488,2.60e-07,4;UBERON:0010077,3.51e-07,4;UBERON:0005389,3.51e-07,4;UBERON:0000484,3.51e-07,4;UBERON:0002546,3.51e-07,4;UBERON:0000965,3.51e-07,4;UBERON:0001803,3.51e-07,4;UBERON:0003073,3.51e-07,4;UBERON:0005426,3.51e-07,4;UBERON:0000059,5.32e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,5.17108443922509,0.612002073732759,7.20945859399602,2.0036519099174,1.64249310087461,1.38096903554283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786021525498329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.802320587350522,0.144824403882799,0,0,0,0,0,0,0,0,5.67208902984407,4.21285855178871,5.70926107005319,0.392937226493138,0,0,0,0,0,0,0,0,0.596287222100115,0,0,0,0,0.825354125820202,0,0,0,0,1.61131726843659,0,0.24406205754817,0.735326160691737,2.43042584364528,0.0892997282840798,0,0.112611480483322,0,0,1.09921046358244,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,5.61079048196139,8.0843158676106,9.76029120103954,8.70752862129112,8.07426722802011,7.2995471815166,0,0,0,0,0,0.828147600278907,0.674338760312407,0.482022059766964,0.220587945464788,0.653638332277218,0.949082476444386,0.943819157121151,0.196221465125346,0.38474715694639,0,0,0.8231480226628,0,13.9430538304014,6.87979051674338,7.08947888017685,0,10.3310288376215,1.71567810298526,0,0,0,0.277765335475589,0,0,4.3299402607582,15.3028134567101,1.05667824812239,0.144366447761074,0,0.190254152234598,0.790204397959275,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0.25248486685276,2.60341366597893,0,0,0,0.308482478109971,0.300343057843917,0,0.112131084345361,0.43596006883328,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0,0,0.508189248444927,0,7.73288812777695,15.7465289414288,9.56908127479745,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0,0,0.391602314925481,0.343143423810856,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0.519254429183621,0,16.0743067956858,0.802025881213139,0.0920809889358963,0,0,0.262248829918848,0,0.231046011313244,0.784349769176855,0,0.422206515571503,0,0,0.215915916102139,0,0.270946437543853,1.50506932156456,0,0,0.223874754722178,0.219259876645935,0,2.3080511260475,1.31205858279882,1.62689197332152,2.88514832613622,0.0915694648183434,0.082509499920588,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0,0.0852266274161009,0.979352392114111,0,0.192190067365106,0,0.2023155617111,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,2.82431402330337,0,0,0,1.83778720165568,0,0,0,0,0,0,0,0,2.67060177818683,0,0.490080431962063,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0.338583555603207,0,0,0,0,0.307240764308458,0,0.834245708559542,0,0,0,0,0,0,0,0,0.121360521749513,0,3.12549761487054,0,0,0,1.9882952955326,0.703347082052564,0,0,4.22250816255987,0,1.93398740871803,0,1.32949287252801,1.10776324914963,0,0,1.25314822272926,0,0,0,0,0.969332746095218,0.463840490809256,9.98068990005971,1.04171104434093,0,0,0,0.254253650292766,0.945550727071745,1.37897349296586,0.583209226766509,4.34062487333231,0.885741385813839,0.60298219312704,0,0.221158519862449,0.591095237907095,0.87754158861589,0.653630781113941,0.697118721393016,0,0.227884111694002,1.61394733071642,3.05175990993225,2.06430006651815,0,0.0915975934018623,0,0,0,0,0.225595660617181,0,0,0,0.158936578980379,0,0,5.08871057162187,0,6.96683351754953,4.59979335417364,10.3875124638716,0.296521128680622,0,0,0.876214728748802,0.802577647298789,2.10838001152805,0,0.586993856796269,2.91336455440911,0,4.83962864194656,11.3246921803281,0.126373159256976,1.35291077473043,1.7626992537532,1.32930774541437,0.330991955875499,0.313932918407225,0,0,1.10939738410511,0.347119476670262,0.0979923974143777,0,0,0,0.580537987734511,0.877071805034227,1.31384731285135,0.0969890164884194,1.6768664071385,3.16373037092745,0,0,0.696418755514666,1.56441106187842,0,5.97668385270187,0.599428828746391,0.288180834308212,1.60351234632282,0,4.60975353562079,1.86378803348149,0,1.63085047288337,2.71967400412066,2.14196257036276,1.15580235960608,0.600420288709789,0.136905378891993,0,0,0,0.279282401272254,0,0,1.99679000498991,0,0,0.268733889946905,0,0,11.7386941637763,11.7854677485068,13.8851300339621,1.27955725969173,0,0,0.544813624446302,7.23389168092586,6.18927464687552,6.64704540846696,0,0,0.668245123238271,0.335434687599266,0.472834243795189,1.04909176269996,0.211200673038813,0,0,0,0,0,0,0,0,3.59190574687462,0.082092520749339,0.170388021785422,0.339936274560377,4.83622371137672,5.30027555648885,0.129282956361551,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471162288750703,0.886068179966986,0.610131324509816,0.250381861413,1.72022758707021,0.332787154610557,0.620964029413834,6.50238584200285,0.124980407962107,0.303298235083296,0.856396000634902,0,3.27834434064817,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15571898244382,0.21444159137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| ||
|short_description=p@chr19:1300274..1300279,+ | |||
}} | }} |
Latest revision as of 03:51, 26 July 2015
Short description: | p@chr19:1300274..1300279, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:1300274..1300279, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 3.02e-18 | 25 |
neurectodermal cell | 1.51e-14 | 59 |
neuron associated cell | 1.35e-11 | 17 |
neuron associated cell (sensu Vertebrata) | 1.35e-11 | 17 |
neuron | 1.43e-11 | 6 |
neuroblast | 1.43e-11 | 6 |
electrically signaling cell | 1.43e-11 | 6 |
glial cell (sensu Vertebrata) | 3.32e-11 | 15 |
glial cell | 3.32e-11 | 15 |
glioblast | 3.32e-11 | 15 |
glioblast (sensu Vertebrata) | 3.32e-11 | 15 |
ectodermal cell | 1.36e-10 | 72 |
embryonic stem cell | 7.14e-10 | 5 |
migratory neural crest cell | 3.94e-09 | 41 |
neuronal stem cell | 2.11e-08 | 8 |
oligodendrocyte | 7.70e-08 | 7 |
macroglial cell | 7.70e-08 | 7 |
astrocyte | 7.70e-08 | 7 |
oligodendrocyte precursor cell | 7.70e-08 | 7 |
germ line cell | 2.38e-07 | 7 |
germ cell | 2.38e-07 | 7 |
crystallin accumulating cell | 3.51e-07 | 4 |
vertebrate lens cell | 3.51e-07 | 4 |
lens epithelial cell | 3.51e-07 | 4 |
hepatocyte | 6.66e-07 | 12 |