FFCP PHASE1:Hg19::chr1:50489522..50489544,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84871 | |EntrezGene=84871 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25892 | |HGNC=25892 | ||
|TSSclassifier=strong | |||
|UniProt=B1ANV5 | |UniProt=B1ANV5 | ||
|association_with_transcript=27bp_to_ENST00000371836_5end | |association_with_transcript=27bp_to_ENST00000371836_5end | ||
|cluster_id=chr1:50489522..50489544,- | |||
|coexpression_cluster_id=C624 | |coexpression_cluster_id=C624 | ||
|description=CAGE_peak_3_at_AGBL4_5end | |description=CAGE_peak_3_at_AGBL4_5end | ||
|id=chr1:50489522..50489544,- | |id=chr1:50489522..50489544,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000123;6.76e-09;2!CL:0000242;6.76e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,6.50e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.03e-16;82!UBERON:0010122;2.64e-09;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.58e-77!57;UBERON:0005068!4.58e-77!57;UBERON:0006241!4.58e-77!57;UBERON:0007135!4.58e-77!57;UBERON:0002780!1.42e-66!41;UBERON:0001890!1.42e-66!41;UBERON:0006240!1.42e-66!41;UBERON:0002616!5.65e-65!59;UBERON:0003080!9.83e-65!42;UBERON:0007023!7.08e-63!115;UBERON:0001017!2.38e-58!82;UBERON:0000955!2.89e-58!69;UBERON:0006238!2.89e-58!69;UBERON:0003075!1.52e-57!86;UBERON:0007284!1.52e-57!86;UBERON:0005743!2.82e-57!86;UBERON:0001893!5.96e-57!34;UBERON:0000073!1.11e-56!94;UBERON:0001016!1.11e-56!94;UBERON:0002020!1.21e-56!34;UBERON:0003528!1.21e-56!34;UBERON:0002346!1.76e-56!90;UBERON:0002791!8.18e-55!33;UBERON:0001869!1.01e-53!32;UBERON:0003056!1.94e-43!61;UBERON:0002619!6.36e-43!22;UBERON:0000956!2.74e-40!25;UBERON:0000203!2.74e-40!25;UBERON:0001950!6.56e-39!20;UBERON:0000924!9.20e-30!173;UBERON:0006601!9.20e-30!173;UBERON:0000033!1.12e-29!123;UBERON:0004121!1.23e-29!169;UBERON:0000153!5.19e-29!129;UBERON:0007811!5.19e-29!129;UBERON:0000025!1.10e-24!194;UBERON:0002420!5.16e-18!9;UBERON:0007245!5.16e-18!9;UBERON:0010009!5.16e-18!9;UBERON:0010011!5.16e-18!9;UBERON:0000454!5.16e-18!9;UBERON:0002308!1.51e-17!9;UBERON:0000125!1.51e-17!9;UBERON:0004111!1.89e-17!241;UBERON:0000477!2.73e-14!286;UBERON:0000483!4.47e-14!309;UBERON:0009663!4.60e-14!7;UBERON:0000200!5.78e-14!6;UBERON:0000119!8.98e-14!312;UBERON:0003076!1.22e-13!15;UBERON:0003057!1.22e-13!15;UBERON:0001871!1.61e-13!7;UBERON:0002298!8.81e-12!8;UBERON:0000349!1.22e-11!5;UBERON:0001872!2.32e-11!5;UBERON:0002021!3.53e-11!5;UBERON:0001894!8.91e-11!7;UBERON:0006222!8.91e-11!7;UBERON:0000064!1.36e-09!219;UBERON:0000369!1.37e-09!4;UBERON:0002435!1.37e-09!4;UBERON:0000204!1.37e-09!4;UBERON:0010082!1.37e-09!4;UBERON:0003296!1.46e-09!4;UBERON:0010133!1.46e-09!4;UBERON:0004733!1.52e-09!12;UBERON:0002028!1.52e-09!12;UBERON:0007277!1.52e-09!12;UBERON:0000062!1.94e-09!511;UBERON:0004732!1.07e-08!13;UBERON:0000922!1.51e-08!612;UBERON:0000475!2.18e-08!365;UBERON:0002050!2.30e-08!605;UBERON:0005423!2.30e-08!605;UBERON:0000923!6.74e-08!604;UBERON:0005291!6.74e-08!604;UBERON:0006598!6.74e-08!604;UBERON:0002532!6.74e-08!604;UBERON:0002771!7.27e-08!3;UBERON:0000481!8.60e-08!347;UBERON:0005383!1.56e-07!3;UBERON:0005382!1.56e-07!3;UBERON:0001896!5.60e-07!3;UBERON:0005290!5.60e-07!3;UBERON:0010096!5.60e-07!3;UBERON:0000988!5.72e-07!3 | |ontology_enrichment_uberon=UBERON:0001049!4.58e-77!57;UBERON:0005068!4.58e-77!57;UBERON:0006241!4.58e-77!57;UBERON:0007135!4.58e-77!57;UBERON:0002780!1.42e-66!41;UBERON:0001890!1.42e-66!41;UBERON:0006240!1.42e-66!41;UBERON:0002616!5.65e-65!59;UBERON:0003080!9.83e-65!42;UBERON:0007023!7.08e-63!115;UBERON:0001017!2.38e-58!82;UBERON:0000955!2.89e-58!69;UBERON:0006238!2.89e-58!69;UBERON:0003075!1.52e-57!86;UBERON:0007284!1.52e-57!86;UBERON:0005743!2.82e-57!86;UBERON:0001893!5.96e-57!34;UBERON:0000073!1.11e-56!94;UBERON:0001016!1.11e-56!94;UBERON:0002020!1.21e-56!34;UBERON:0003528!1.21e-56!34;UBERON:0002346!1.76e-56!90;UBERON:0002791!8.18e-55!33;UBERON:0001869!1.01e-53!32;UBERON:0003056!1.94e-43!61;UBERON:0002619!6.36e-43!22;UBERON:0000956!2.74e-40!25;UBERON:0000203!2.74e-40!25;UBERON:0001950!6.56e-39!20;UBERON:0000924!9.20e-30!173;UBERON:0006601!9.20e-30!173;UBERON:0000033!1.12e-29!123;UBERON:0004121!1.23e-29!169;UBERON:0000153!5.19e-29!129;UBERON:0007811!5.19e-29!129;UBERON:0000025!1.10e-24!194;UBERON:0002420!5.16e-18!9;UBERON:0007245!5.16e-18!9;UBERON:0010009!5.16e-18!9;UBERON:0010011!5.16e-18!9;UBERON:0000454!5.16e-18!9;UBERON:0002308!1.51e-17!9;UBERON:0000125!1.51e-17!9;UBERON:0004111!1.89e-17!241;UBERON:0000477!2.73e-14!286;UBERON:0000483!4.47e-14!309;UBERON:0009663!4.60e-14!7;UBERON:0000200!5.78e-14!6;UBERON:0000119!8.98e-14!312;UBERON:0003076!1.22e-13!15;UBERON:0003057!1.22e-13!15;UBERON:0001871!1.61e-13!7;UBERON:0002298!8.81e-12!8;UBERON:0000349!1.22e-11!5;UBERON:0001872!2.32e-11!5;UBERON:0002021!3.53e-11!5;UBERON:0001894!8.91e-11!7;UBERON:0006222!8.91e-11!7;UBERON:0000064!1.36e-09!219;UBERON:0000369!1.37e-09!4;UBERON:0002435!1.37e-09!4;UBERON:0000204!1.37e-09!4;UBERON:0010082!1.37e-09!4;UBERON:0003296!1.46e-09!4;UBERON:0010133!1.46e-09!4;UBERON:0004733!1.52e-09!12;UBERON:0002028!1.52e-09!12;UBERON:0007277!1.52e-09!12;UBERON:0000062!1.94e-09!511;UBERON:0004732!1.07e-08!13;UBERON:0000922!1.51e-08!612;UBERON:0000475!2.18e-08!365;UBERON:0002050!2.30e-08!605;UBERON:0005423!2.30e-08!605;UBERON:0000923!6.74e-08!604;UBERON:0005291!6.74e-08!604;UBERON:0006598!6.74e-08!604;UBERON:0002532!6.74e-08!604;UBERON:0002771!7.27e-08!3;UBERON:0000481!8.60e-08!347;UBERON:0005383!1.56e-07!3;UBERON:0005382!1.56e-07!3;UBERON:0001896!5.60e-07!3;UBERON:0005290!5.60e-07!3;UBERON:0010096!5.60e-07!3;UBERON:0000988!5.72e-07!3 | ||
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|short_description=p3@AGBL4 | |short_description=p3@AGBL4 | ||
}} | }} |
Latest revision as of 10:42, 18 September 2015
Short description: | p3@AGBL4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_AGBL4_5end |
Coexpression cluster: | C624_pituitary_cerebellum_occipital_parietal_middle_medial_hippocampus |
Association with transcript: | 27bp_to_ENST00000371836_5end |
EntrezGene: | AGBL4 |
HGNC: | 25892 |
UniProt: | B1ANV5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 6.50e-09 | 2 |