FFCP PHASE1:Hg19::chr19:48325184..48325211,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1406 | |EntrezGene=1406 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2383 | |HGNC=2383 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000556527_5end | |association_with_transcript=0bp_to_ENST00000556527_5end | ||
|cluster_id=chr19:48325184..48325211,+ | |||
|coexpression_cluster_id=C24 | |coexpression_cluster_id=C24 | ||
|description=CAGE_peak_1_at_CRX_5end | |description=CAGE_peak_1_at_CRX_5end | ||
|id=chr19:48325184..48325211,+ | |id=chr19:48325184..48325211,+ | ||
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|ontology_enrichment_celltype_v019=CL:0002322;5.84e-33;5!CL:0000147;1.99e-18;14!CL:0002586;5.89e-15;3!CL:0000149;1.87e-11;4!CL:0002321;3.38e-11;15!CL:0000148;7.40e-10;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,5.84e-33,5;CL:0000147,1.95e-18,14;CL:0002586,6.10e-15,3;CL:0000149,1.92e-11,4;CL:0000148,7.18e-10,10;CL:0000541,7.18e-10,10 | |||
|ontology_enrichment_development_v019=UBERON:0003056;2.60e-15;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p1@CRX | |short_description=p1@CRX | ||
}} | }} |
Latest revision as of 00:58, 19 September 2015
Short description: | p1@CRX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CRX_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 0bp_to_ENST00000556527_5end |
EntrezGene: | CRX |
HGNC: | 2383 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 5.84e-33 | 5 |
pigment cell | 1.95e-18 | 14 |
retinal pigment epithelial cell | 6.10e-15 | 3 |
visual pigment cell | 1.92e-11 | 4 |
melanocyte | 7.18e-10 | 10 |
melanoblast | 7.18e-10 | 10 |