FFCP PHASE1:Hg19::chr15:39889064..39889095,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:39889064..39889095,+ | |||
|coexpression_cluster_id=C453 | |coexpression_cluster_id=C453 | ||
|description=CAGE_peak_at_chr15:39889064..39889095,+ | |description=CAGE_peak_at_chr15:39889064..39889095,+ | ||
|id=chr15:39889064..39889095,+ | |id=chr15:39889064..39889095,+ | ||
|ontology_enrichment_celltype=CL:0000055!5.49e-15!180;CL:0002371!1.70e-14!591;CL:0000057!2.06e-13!75;CL:0000222!2.45e-12!119;CL:0002139!2.63e-11!24;CL:0000144!4.68e-11!625;CL:0000548!1.36e-10!679;CL:0000004!1.36e-10!679;CL:0000255!1.36e-10!679;CL:0000012!2.33e-10!682;CL:0000115!3.00e-10!35;CL:0000220!4.01e-09!246;CL:0000071!5.93e-09!18;CL:0002546!5.93e-09!18;CL:0002321!6.81e-09!248;CL:0002078!3.22e-08!44;CL:0000680!2.33e-07!57;CL:0000056!2.33e-07!57;CL:0000355!2.33e-07!57;CL:0002620!6.44e-07!23;CL:0000192!7.10e-07!42;CL:0000514!7.10e-07!42;CL:0000187!8.90e-07!54 | |ontology_enrichment_celltype=CL:0000055!5.49e-15!180;CL:0002371!1.70e-14!591;CL:0000057!2.06e-13!75;CL:0000222!2.45e-12!119;CL:0002139!2.63e-11!24;CL:0000144!4.68e-11!625;CL:0000548!1.36e-10!679;CL:0000004!1.36e-10!679;CL:0000255!1.36e-10!679;CL:0000012!2.33e-10!682;CL:0000115!3.00e-10!35;CL:0000220!4.01e-09!246;CL:0000071!5.93e-09!18;CL:0002546!5.93e-09!18;CL:0002321!6.81e-09!248;CL:0002078!3.22e-08!44;CL:0000680!2.33e-07!57;CL:0000056!2.33e-07!57;CL:0000355!2.33e-07!57;CL:0002620!6.44e-07!23;CL:0000192!7.10e-07!42;CL:0000514!7.10e-07!42;CL:0000187!8.90e-07!54 | ||
|ontology_enrichment_celltype_v019=CL:0002139;2.28e-15;24!CL:0000071;4.18e-12;18!CL:0000115;3.90e-11;36!CL:1000413;2.42e-08;9!CL:0002620;1.32e-07;23!CL:0000349;5.21e-07;19!CL:0002078;5.37e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.73e-15,24;CL:0000057,1.61e-14,76;CL:0000115,6.28e-13,36;CL:0000071,3.20e-12,18;CL:0002546,3.20e-12,18;CL:0000222,1.60e-10,121;CL:0002078,2.11e-10,45;CL:1000413,1.93e-08,9;CL:0002620,1.58e-07,23;CL:0000213,1.64e-07,58;CL:0000215,1.64e-07,58;CL:0000048,3.15e-07,427;CL:0000723,3.32e-07,433;CL:0000349,3.60e-07,19 | |||
|ontology_enrichment_development_v019=CL:0002546;4.18e-12;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!1.12e-15!69;UBERON:0001981!2.99e-15!60;UBERON:0007500!2.99e-15!60;UBERON:0004537!2.99e-15!60;UBERON:0006965!2.99e-15!60;UBERON:0002049!3.88e-15!79;UBERON:0007798!3.88e-15!79;UBERON:0004872!7.72e-15!84;UBERON:0003914!9.02e-13!118;UBERON:0000468!3.43e-12!659;UBERON:0001637!6.00e-12!42;UBERON:0003509!6.00e-12!42;UBERON:0004572!6.00e-12!42;UBERON:0000467!2.56e-11!625;UBERON:0000480!3.94e-11!626;UBERON:0000926!6.28e-11!448;UBERON:0004120!6.28e-11!448;UBERON:0006603!6.28e-11!448;UBERON:0000490!2.17e-10!138;UBERON:0004535!4.77e-10!110;UBERON:0001009!5.60e-10!113;UBERON:0000947!5.79e-09!21;UBERON:0010191!5.79e-09!21;UBERON:0001986!5.93e-09!18;UBERON:0004638!5.93e-09!18;UBERON:0004852!5.93e-09!18;UBERON:0002100!6.19e-09!216;UBERON:0000914!1.19e-08!83;UBERON:0002329!1.19e-08!83;UBERON:0003077!1.19e-08!83;UBERON:0003059!1.19e-08!83;UBERON:0007282!1.19e-08!83;UBERON:0009618!1.19e-08!83;UBERON:0007285!1.19e-08!83;UBERON:0004573!1.22e-08!33;UBERON:0004571!1.22e-08!33;UBERON:0000486!1.26e-08!82;UBERON:0005256!3.10e-08!143;UBERON:0003102!1.34e-07!95;UBERON:0000487!1.67e-07!22;UBERON:0004923!3.19e-07!57;UBERON:0003081!4.77e-07!216;UBERON:0004290!5.19e-07!70;UBERON:0005631!6.72e-07!14;UBERON:0000158!6.72e-07!14;UBERON:0001134!7.68e-07!61;UBERON:0002036!7.68e-07!61;UBERON:0003082!7.68e-07!61;UBERON:0002385!7.84e-07!63;UBERON:0001015!7.84e-07!63;UBERON:0000383!7.84e-07!63 | |ontology_enrichment_uberon=UBERON:0000055!1.12e-15!69;UBERON:0001981!2.99e-15!60;UBERON:0007500!2.99e-15!60;UBERON:0004537!2.99e-15!60;UBERON:0006965!2.99e-15!60;UBERON:0002049!3.88e-15!79;UBERON:0007798!3.88e-15!79;UBERON:0004872!7.72e-15!84;UBERON:0003914!9.02e-13!118;UBERON:0000468!3.43e-12!659;UBERON:0001637!6.00e-12!42;UBERON:0003509!6.00e-12!42;UBERON:0004572!6.00e-12!42;UBERON:0000467!2.56e-11!625;UBERON:0000480!3.94e-11!626;UBERON:0000926!6.28e-11!448;UBERON:0004120!6.28e-11!448;UBERON:0006603!6.28e-11!448;UBERON:0000490!2.17e-10!138;UBERON:0004535!4.77e-10!110;UBERON:0001009!5.60e-10!113;UBERON:0000947!5.79e-09!21;UBERON:0010191!5.79e-09!21;UBERON:0001986!5.93e-09!18;UBERON:0004638!5.93e-09!18;UBERON:0004852!5.93e-09!18;UBERON:0002100!6.19e-09!216;UBERON:0000914!1.19e-08!83;UBERON:0002329!1.19e-08!83;UBERON:0003077!1.19e-08!83;UBERON:0003059!1.19e-08!83;UBERON:0007282!1.19e-08!83;UBERON:0009618!1.19e-08!83;UBERON:0007285!1.19e-08!83;UBERON:0004573!1.22e-08!33;UBERON:0004571!1.22e-08!33;UBERON:0000486!1.26e-08!82;UBERON:0005256!3.10e-08!143;UBERON:0003102!1.34e-07!95;UBERON:0000487!1.67e-07!22;UBERON:0004923!3.19e-07!57;UBERON:0003081!4.77e-07!216;UBERON:0004290!5.19e-07!70;UBERON:0005631!6.72e-07!14;UBERON:0000158!6.72e-07!14;UBERON:0001134!7.68e-07!61;UBERON:0002036!7.68e-07!61;UBERON:0003082!7.68e-07!61;UBERON:0002385!7.84e-07!63;UBERON:0001015!7.84e-07!63;UBERON:0000383!7.84e-07!63 | ||
|ontology_enrichment_uberon_v019=UBERON:0001637;2.58e-12;42!UBERON:0003509;2.58e-12;42!UBERON:0004572;2.58e-12;42!UBERON:0004638;4.18e-12;18!UBERON:0001986;4.18e-12;18!UBERON:0004852;4.18e-12;18!UBERON:0000947;1.40e-10;21!UBERON:0010191;1.40e-10;21!UBERON:0000055;1.42e-10;65!UBERON:0007500;1.51e-10;56!UBERON:0001981;1.51e-10;56!UBERON:0004537;1.51e-10;56!UBERON:0004573;2.33e-10;33!UBERON:0004571;2.33e-10;33!UBERON:0000487;5.12e-10;22!UBERON:0005631;2.18e-08;10!UBERON:0000158;2.18e-08;10!UBERON:0003915;2.42e-08;9!UBERON:0004700;2.42e-08;9!UBERON:0001917;2.42e-08;9!UBERON:0006914;4.24e-08;25!UBERON:0000305;8.97e-07;7 | |||
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|phase1_expression=13.4442000660212,11.1332272423311,6.06103937612676,13.009528785907,2.68176656656373,13.9574163856059,0,0,0.261185628199839,2.21160542851358,0.697801167972428,5.89791704751465,2.90143676051299,0.123766352960047,0.662794751455832,13.4465029290355,6.62963980826375,5.84248072309899,7.3189919818576,0,0.204000691244253,1.56727360739044,0.286235987131057,0.547497700291537,0.251085279189606,0,0,0,0.393364276848904,0.383829398097213,2.16742572642506,1.83884244895785,1.204823675113,0,0,0,0,2.21598163412751,2.00544447470142,1.08505435357926,0.223915474239924,0,0.515151135268373,1.59938062657521,1.13362783106643,0,7.90258725479328,0,0,6.61692502340946,0.768482119587302,0.47296445977717,6.55016793399575,1.93645405075148,0,4.32957380947991,0.272906150057846,1.34834090667051,6.42776173978895,2.56743221660875,0.639337125799041,1.64925650093358,0.398927315243264,1.27867425159808,8.12585868160035,1.13477044938228,2.4912889959823,6.02996796616184,2.08593167368081,0.217188844705117,8.47559303686716,0.736555271975129,0.632924774881769,0.211255286311942,0,0,0.22465726229299,0.901061357049038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,2.17366355134002,0.722878304769133,2.00535164254356,1.30361867064741,0,4.86634870302636,0.283604451492204,0,0.263504357079378,0.0654895377488563,0.364295288292542,1.11235332835329,0,0,0,0.238490624305342,0,0,6.75792185046797,2.58070378531837,16.3156035755569,5.6530794192401,2.51699661725944,6.87795104850169,3.9709043641994,1.8089173141853,1.06729878806013,3.3472061276467,3.22263453687318,2.28081631715554,4.14905497831888,12.8682078121054,16.2028389576352,4.10778750106767,4.4905874525234,6.75668882899933,0,2.84779697870439,2.74802615895611,0,0,2.18047026071267,63.1154378653055,3.41902381494365,5.56118559415519,2.86836620748814,1.77334191099179,2.80338800071154,3.20246987189115,7.15335890409764,1.55605517699883,0.404132016209064,1.63461903113459,0.302714855289863,1.15235184896,0,0,0.570471821544449,0.747243402759005,0.23486899728753,0,0.140450806702248,0.61246251376468,0.122834317311768,0.206651562351531,16.6320400019487,25.7157606449699,0,0,0,0,0.831192346452549,11.4134181429018,17.4698043605441,27.0428506031874,1.47461838108027,9.68704032719855,8.11518077510556,6.56988893594642,4.20127534518163,5.66788910811414,4.63752972082133,5.58350568994769,8.94514560878711,2.53336213419116,3.28163906517349,5.98324341174946,1.61646056818812,7.10019185033229,2.61955455391865,3.73033303083073,1.93260853163297,4.63668405004419,5.16248271700207,0.121973706129595,0,0.116193942869518,0,0,0.36497735907583,1.56449532329816,14.1513006402435,1.38134921352481,6.50115099244771,0,0.236613600079688,0,0.482022059766964,0.110293972732394,0,0.237270619111097,0.269662616320329,0,0,1.4763109092493,0,1.2347220339942,1.47008711385542,0,0,0,0,0,0.686271241194102,1.64625428112938,0,1.40740561376283,0.740707561268237,0,0,0,0,0.939269553886573,3.75352764178792,5.55582615091933,6.84914948044554,0,0,0,0,0,3.74935335947108,5.87937448696008,3.1190521393325,2.05984602216551,2.03443756959773,1.15014803749563,0,0,0.207328115540772,0,0,0.063497894292169,0,0,0,0.616964956219941,0,0,0,0.43596006883328,0.07333828582095,1.80980402060889,0,0,4.5209479819428,3.12022310734098,0,0,0,0.857867961948885,0,0.823240336780769,0,0.355391948742546,0,0,0,0,0,0,0,2.15662369942424,1.14861935834114,1.42636905040718,1.88215698667853,0.410952645100767,2.86497541183833,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0.24538298343828,0.500170521059677,0.813795071099207,16.4296980609338,21.5899076444566,18.7665873890382,21.0854546986884,3.91229929646035,4.5481500811197,0,0,1.84369168541703,3.0409265063829,0,0.343143423810856,0,0.215714200818617,0.213455115606889,0.606255142892519,1.66435439510497,2.11673205330776,11.6610669674825,34.375482016526,14.0330047216537,5.76626171650654,8.69902323413396,13.9942911394939,4.45254199334973,1.69630663182921,1.59805552781814,0.492762936082855,0.519254429183621,0.232420756919918,0,2.6065841139427,0.276242966807689,1.37777337797528,0.182091168006717,1.04899531967539,0,0,0,0,0,3.4120015221269,1.87103075804167,10.5798798890048,7.71136263451447,0.270946437543853,0.501689773854853,0.509752546090077,0,0,0,0,0,0,0.650756789328606,0.515205058238611,0.0915694648183434,0,1.72279661398852,0,0,0.193341436584244,0.308097234229289,0.15350367472613,0.551346289938122,0.322260734604821,0.290033387828457,0.340906509664404,0.356128142586949,1.15699440752685,6.3422722230485,10.7194678495451,1.31505115112215,0.464845549297286,4.40737285562896,2.7881490806424,0.308033580176089,1.59691809095107,1.73986598415015,2.03856641014312,1.00187420719394,0.372158369359667,0.949138274156178,0.38126038784765,0.255897791311334,1.28381696410176,0,0,1.79872457583315,0.54907405947211,0.471249609382746,1.41527737101321,0,2.94880919367287,0,0.243713489631284,1.05650146756755,0.682499557039929,1.27264888758341,1.13008116620243,1.65409603063837,1.32687795048244,3.50760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| ||
|short_description=p@chr15:39889064..39889095,+ | |short_description=p@chr15:39889064..39889095,+ | ||
}} | }} |
Latest revision as of 01:23, 25 July 2015
Short description: | p@chr15:39889064..39889095, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:39889064..39889095, + |
Coexpression cluster: | C453_hepatic_Ewing_neurofibroma_spindle_tridermal_Olfactory_bone |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.73e-15 | 24 |
fibroblast | 1.61e-14 | 76 |
endothelial cell | 6.28e-13 | 36 |
blood vessel endothelial cell | 3.20e-12 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.20e-12 | 18 |
mesodermal cell | 1.60e-10 | 121 |
meso-epithelial cell | 2.11e-10 | 45 |
endothelial cell of artery | 1.93e-08 | 9 |
skin fibroblast | 1.58e-07 | 23 |
lining cell | 1.64e-07 | 58 |
barrier cell | 1.64e-07 | 58 |
multi fate stem cell | 3.15e-07 | 427 |
somatic stem cell | 3.32e-07 | 433 |
extraembryonic cell | 3.60e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
vessel | 1.06e-19 | 68 |
epithelial tube open at both ends | 3.04e-18 | 59 |
blood vessel | 3.04e-18 | 59 |
blood vasculature | 3.04e-18 | 59 |
vascular cord | 3.04e-18 | 59 |
artery | 1.22e-15 | 42 |
arterial blood vessel | 1.22e-15 | 42 |
arterial system | 1.22e-15 | 42 |
vasculature | 1.25e-15 | 78 |
vascular system | 1.25e-15 | 78 |
splanchnic layer of lateral plate mesoderm | 5.05e-15 | 83 |
epithelial tube | 1.49e-12 | 117 |
blood vessel endothelium | 3.20e-12 | 18 |
endothelium | 3.20e-12 | 18 |
cardiovascular system endothelium | 3.20e-12 | 18 |
systemic artery | 4.58e-11 | 33 |
systemic arterial system | 4.58e-11 | 33 |
aorta | 6.49e-11 | 21 |
aortic system | 6.49e-11 | 21 |
cardiovascular system | 1.54e-10 | 109 |
circulatory system | 2.41e-10 | 112 |
simple squamous epithelium | 4.35e-10 | 22 |
lateral plate mesoderm | 1.35e-09 | 203 |
endothelial tube | 1.93e-08 | 9 |
arterial system endothelium | 1.93e-08 | 9 |
endothelium of artery | 1.93e-08 | 9 |
squamous epithelium | 3.70e-08 | 25 |
extraembryonic membrane | 1.73e-07 | 14 |
membranous layer | 1.73e-07 | 14 |
amnion | 7.60e-07 | 7 |
organ component layer | 7.96e-07 | 66 |
unilaminar epithelium | 9.11e-07 | 148 |
skin of body | 9.56e-07 | 41 |