FFCP PHASE1:Hg19::chr15:39888826..39888850,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:39888826..39888850,+ | |||
|coexpression_cluster_id=C453 | |coexpression_cluster_id=C453 | ||
|description=CAGE_peak_at_chr15:39888826..39888850,+ | |description=CAGE_peak_at_chr15:39888826..39888850,+ | ||
|id=chr15:39888826..39888850,+ | |id=chr15:39888826..39888850,+ | ||
|ontology_enrichment_celltype=CL:0002371!1.45e-14!591;CL:0000055!1.29e-13!180;CL:0000057!1.99e-13!75;CL:0000144!2.29e-12!625;CL:0000548!2.39e-11!679;CL:0000004!2.39e-11!679;CL:0000255!2.39e-11!679;CL:0000012!8.45e-11!682;CL:0000222!2.94e-10!119;CL:0000220!1.91e-08!246;CL:0002139!3.04e-08!24;CL:0002321!4.52e-08!248;CL:0002620!4.77e-07!23;CL:0000359!7.61e-07!32 | |ontology_enrichment_celltype=CL:0002371!1.45e-14!591;CL:0000055!1.29e-13!180;CL:0000057!1.99e-13!75;CL:0000144!2.29e-12!625;CL:0000548!2.39e-11!679;CL:0000004!2.39e-11!679;CL:0000255!2.39e-11!679;CL:0000012!8.45e-11!682;CL:0000222!2.94e-10!119;CL:0000220!1.91e-08!246;CL:0002139!3.04e-08!24;CL:0002321!4.52e-08!248;CL:0002620!4.77e-07!23;CL:0000359!7.61e-07!32 | ||
|ontology_enrichment_celltype_v019=CL:0002139;4.66e-10;24!CL:0000115;6.84e-09;36!CL:0000349;5.16e-08;19!CL:0000071;1.41e-07;18!CL:0002620;1.60e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.84e-13,76;CL:0000115,2.51e-10,36;CL:0002139,4.42e-10,24;CL:0000222,7.65e-09,121;CL:0002078,1.54e-08,45;CL:0000349,3.84e-08,19;CL:0002620,9.20e-08,23;CL:0000071,1.09e-07,18;CL:0002546,1.09e-07,18;CL:0000723,5.53e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002546;1.41e-07;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!4.41e-15!84;UBERON:0000055!8.77e-15!69;UBERON:0001981!4.73e-14!60;UBERON:0007500!4.73e-14!60;UBERON:0004537!4.73e-14!60;UBERON:0006965!4.73e-14!60;UBERON:0002049!1.04e-13!79;UBERON:0007798!1.04e-13!79;UBERON:0000468!6.33e-12!659;UBERON:0001637!1.99e-11!42;UBERON:0003509!1.99e-11!42;UBERON:0004572!1.99e-11!42;UBERON:0003914!2.21e-11!118;UBERON:0001009!1.06e-10!113;UBERON:0000480!1.87e-10!626;UBERON:0000467!2.13e-10!625;UBERON:0004535!2.45e-10!110;UBERON:0003102!1.41e-09!95;UBERON:0000926!3.00e-09!448;UBERON:0004120!3.00e-09!448;UBERON:0006603!3.00e-09!448;UBERON:0004923!3.45e-09!57;UBERON:0002199!5.95e-09!45;UBERON:0002416!5.95e-09!45;UBERON:0004573!1.94e-08!33;UBERON:0004571!1.94e-08!33;UBERON:0000947!5.01e-08!21;UBERON:0010191!5.01e-08!21;UBERON:0000914!1.07e-07!83;UBERON:0002329!1.07e-07!83;UBERON:0003077!1.07e-07!83;UBERON:0003059!1.07e-07!83;UBERON:0007282!1.07e-07!83;UBERON:0009618!1.07e-07!83;UBERON:0007285!1.07e-07!83;UBERON:0002097!1.07e-07!40;UBERON:0000490!1.90e-07!138;UBERON:0000486!3.05e-07!82;UBERON:0003081!5.48e-07!216 | |ontology_enrichment_uberon=UBERON:0004872!4.41e-15!84;UBERON:0000055!8.77e-15!69;UBERON:0001981!4.73e-14!60;UBERON:0007500!4.73e-14!60;UBERON:0004537!4.73e-14!60;UBERON:0006965!4.73e-14!60;UBERON:0002049!1.04e-13!79;UBERON:0007798!1.04e-13!79;UBERON:0000468!6.33e-12!659;UBERON:0001637!1.99e-11!42;UBERON:0003509!1.99e-11!42;UBERON:0004572!1.99e-11!42;UBERON:0003914!2.21e-11!118;UBERON:0001009!1.06e-10!113;UBERON:0000480!1.87e-10!626;UBERON:0000467!2.13e-10!625;UBERON:0004535!2.45e-10!110;UBERON:0003102!1.41e-09!95;UBERON:0000926!3.00e-09!448;UBERON:0004120!3.00e-09!448;UBERON:0006603!3.00e-09!448;UBERON:0004923!3.45e-09!57;UBERON:0002199!5.95e-09!45;UBERON:0002416!5.95e-09!45;UBERON:0004573!1.94e-08!33;UBERON:0004571!1.94e-08!33;UBERON:0000947!5.01e-08!21;UBERON:0010191!5.01e-08!21;UBERON:0000914!1.07e-07!83;UBERON:0002329!1.07e-07!83;UBERON:0003077!1.07e-07!83;UBERON:0003059!1.07e-07!83;UBERON:0007282!1.07e-07!83;UBERON:0009618!1.07e-07!83;UBERON:0007285!1.07e-07!83;UBERON:0002097!1.07e-07!40;UBERON:0000490!1.90e-07!138;UBERON:0000486!3.05e-07!82;UBERON:0003081!5.48e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;2.06e-08;10!UBERON:0000158;2.06e-08;10!UBERON:0007500;4.67e-08;56!UBERON:0001981;4.67e-08;56!UBERON:0004537;4.67e-08;56!UBERON:0000055;7.66e-08;65!UBERON:0003688;8.98e-08;6!UBERON:0002358;8.98e-08;6!UBERON:0003684;8.98e-08;6!UBERON:0001178;8.98e-08;6!UBERON:0001637;9.39e-08;42!UBERON:0003509;9.39e-08;42!UBERON:0004572;9.39e-08;42!UBERON:0004638;1.41e-07;18!UBERON:0001986;1.41e-07;18!UBERON:0004852;1.41e-07;18!UBERON:0000947;6.78e-07;21!UBERON:0010191;6.78e-07;21!UBERON:0000305;7.54e-07;7!UBERON:0002097;7.67e-07;41!UBERON:0000487;9.81e-07;22 | |||
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|phase1_expression=7.08545679155171,8.99222200342129,4.22863212287913,20.0146596706261,4.46961094427288,21.8084631025092,2.53299878168311,0.631719873426831,0.522371256399677,0.737201809504527,0,1.74753097704138,2.90143676051299,0.618831764800233,0.994192127183747,10.0848771967766,3.01347264011988,2.92124036154949,5.36726078669558,0.246242116153576,0,0.313454721478088,0,0.410623275218653,0.125542639594803,0,0,0,0.393364276848904,0,0.464448369948228,1.83884244895785,1.50602959389125,0,0,0,0,0.553995408531877,2.60707781711184,0.217010870715852,0,0,0,0.145398238779565,0,0,2.55671940596253,1.23350366406548,0.619412741790207,2.58923153089935,0.768482119587302,0.47296445977717,1.37898272294647,0,0,2.63539275359647,0.272906150057846,0.674170453335254,2.75475503133812,1.28371610830437,1.27867425159808,0.989553900560148,0.199463657621632,0,8.12585868160035,1.13477044938228,0.622822248995575,4.01997864410789,1.0429658368404,0.217188844705117,7.87019353423379,0.368277635987565,1.58231193720442,0,0,0,0.112328631146495,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,2.42938867502708,0.722878304769133,3.00802746381534,1.88300474649071,0,2.91980922181582,0.0945348171640679,0.443458794925128,0.175669571386252,0,0.364295288292542,0,0,0,0,0,0,0,1.78886166630035,0.860234595106124,4.51282652089873,1.69592382577203,0.838998872419812,1.37559020970034,1.04497483268405,1.29208379584664,0.35576626268671,1.00416183829401,4.02829317109147,4.56163263431108,2.68468263302986,3.67663080345869,5.67099363517232,2.05389375053383,1.79623498100936,2.0270066486998,0,0,1.64881569537367,0,0,0.436094052142534,23.35768172968,5.19185097824777,3.44263870114369,1.43418310374407,0.709336764396714,1.68203280042692,2.1349799145941,5.42668606517752,0.933633106199299,0.269421344139376,1.63461903113459,0.302714855289863,0,0,0.312160076830321,0,0.448346041655403,0.23486899728753,0.161872944368132,0.280901613404497,0.61246251376468,0.368502951935304,0.206651562351531,9.50402285825643,9.64341024186372,0,0,0.673344455816265,0,0.277064115484183,7.46261955497424,10.7270728529657,11.568330535808,1.36118619792025,9.86642996288741,5.97960688691989,5.51022943014861,5.10154863343484,2.88547081867629,4.89517026086695,3.7223371266318,5.06328996723799,1.94874010322397,2.52433774244115,4.51044503347267,1.93975268182574,6.03516307278244,2.11579406278045,3.73033303083073,0.57978255948989,2.45471508531751,0.573609190778008,0,0,0,0,0.504641701751257,0,3.12899064659632,11.5783368874719,1.38134921352481,4.17931135228781,2.88751792667834,0.236613600079688,0.337169380156203,0,0.220587945464788,0.435758888184812,0.71181185733329,0.269662616320329,0.196221465125346,0.38474715694639,1.4763109092493,0,0.4115740113314,0,0,0,0,0,0,0.343135620597051,0.878002283269004,2.24803506515239,1.10581869652794,1.66659201285353,0,0,0,0,0.469634776943287,1.73239737313289,11.1116523018387,5.13686211033415,0,0,0,0,0,2.81201501960331,2.85569617938061,1.70130116690864,2.4180801129769,1.74380363108377,0.383382679165211,0,0,0,0,0,0.063497894292169,0,0,1.71072446022705,0.822619941626588,0,0,0,0,0,0.904902010304444,0,0,3.45719551560332,1.04007436911366,1.02882949704857,1.41849132023278,0,0.285955987316295,1.08524321078289,0,0.325736184293735,0,0,0,0,0,0,0,0,3.11512312139057,2.29723871668228,0,1.30303176000821,1.02738161275192,1.43248770591916,0,0,0,0,0,0,0,0.502548796003046,0,0,0,0,0.36807447515742,1.00034104211935,1.08506009479894,14.1420185840949,13.0253161821928,10.8814666373415,30.22248506812,0,0,0,1.32845119707087,1.10621501125022,2.69339204851057,0,0,0.620304078368662,0.215714200818617,0,1.5156378572313,0,1.81434175997808,7.69134204238208,21.0242903404646,17.4009258548506,4.86928767171664,7.67560873600055,12.0640440857706,11.8734453155993,0.925258162815933,3.01854933032316,0.328508624055237,0.519254429183621,0.464841513839837,0.120859449591622,2.6065841139427,0.276242966807689,1.03333003348146,0.546273504020151,1.04899531967539,0,0,0,1.46139224653261,0,1.13733384070897,2.55140557914773,19.6483483652947,9.25363516141736,0,0,0.254876273045038,1.66215201785745,0,0.219259876645935,0,0,0.656029291399411,0.325378394664303,0.515205058238611,0.0915694648183434,0,0.574265537996172,1.30012049207304,6.42735719376638,0.580024309752732,0,0.307007349452259,0.137836572484531,0.322260734604821,0.145016693914229,0.170453254832202,0.178064071293475,1.4875642382488,1.53752053892085,3.06270509987002,0.4046311234222,0.929691098594572,5.35180989612088,1.3940745403212,0.616067160352178,0.532306030317022,0,0.9266210955196,0.572499546967965,0,0.632758849437452,0.762520775695299,0,1.28381696410176,0,0.78494864019923,0.899362287916574,0.274537029736055,0.706874414074119,2.02182481573316,0,0,0,0.731140468893853,3.16950440270266,1.09199929126389,0.989838023675989,1.13008116620243,1.10273068709225,1.99031692572366,1.75380354101505,0,0,3.44947640836597,1.54911749049875,3.3803472303869,1.00387946542836,0.98249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| ||
|short_description=p@chr15:39888826..39888850,+ | |short_description=p@chr15:39888826..39888850,+ | ||
}} | }} |
Latest revision as of 01:22, 25 July 2015
Short description: | p@chr15:39888826..39888850, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:39888826..39888850, + |
Coexpression cluster: | C453_hepatic_Ewing_neurofibroma_spindle_tridermal_Olfactory_bone |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.84e-13 | 76 |
endothelial cell | 2.51e-10 | 36 |
endothelial cell of vascular tree | 4.42e-10 | 24 |
mesodermal cell | 7.65e-09 | 121 |
meso-epithelial cell | 1.54e-08 | 45 |
extraembryonic cell | 3.84e-08 | 19 |
skin fibroblast | 9.20e-08 | 23 |
blood vessel endothelial cell | 1.09e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.09e-07 | 18 |
somatic stem cell | 5.53e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
vessel | 4.48e-14 | 68 |
epithelial tube open at both ends | 5.16e-13 | 59 |
blood vessel | 5.16e-13 | 59 |
blood vasculature | 5.16e-13 | 59 |
vascular cord | 5.16e-13 | 59 |
splanchnic layer of lateral plate mesoderm | 3.16e-12 | 83 |
vasculature | 2.64e-11 | 78 |
vascular system | 2.64e-11 | 78 |
epithelial tube | 4.03e-10 | 117 |
artery | 7.28e-10 | 42 |
arterial blood vessel | 7.28e-10 | 42 |
arterial system | 7.28e-10 | 42 |
skin of body | 6.56e-09 | 41 |
integument | 6.67e-09 | 46 |
integumental system | 6.67e-09 | 46 |
lateral plate mesoderm | 1.41e-08 | 203 |
somatic layer of lateral plate mesoderm | 7.36e-08 | 8 |
cardiovascular system | 7.46e-08 | 109 |
extraembryonic membrane | 8.35e-08 | 14 |
membranous layer | 8.35e-08 | 14 |
omentum | 8.83e-08 | 6 |
peritoneum | 8.83e-08 | 6 |
abdominal cavity | 8.83e-08 | 6 |
visceral peritoneum | 8.83e-08 | 6 |
blood vessel endothelium | 1.09e-07 | 18 |
endothelium | 1.09e-07 | 18 |
cardiovascular system endothelium | 1.09e-07 | 18 |
circulatory system | 2.52e-07 | 112 |
surface structure | 2.58e-07 | 99 |
aorta | 4.33e-07 | 21 |
aortic system | 4.33e-07 | 21 |
amnion | 7.54e-07 | 7 |
simple squamous epithelium | 8.00e-07 | 22 |
organ component layer | 9.05e-07 | 66 |