FFCP PHASE1:Hg19::chr12:56881874..56881907,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27165 | |EntrezGene=27165 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29570 | |HGNC=29570 | ||
|TSSclassifier=strong | |||
|UniProt=A8K0A6 | |UniProt=A8K0A6 | ||
|association_with_transcript=0bp_to_ENST00000539272_5end | |association_with_transcript=0bp_to_ENST00000539272_5end | ||
|cluster_id=chr12:56881874..56881907,- | |||
|coexpression_cluster_id=C1364 | |coexpression_cluster_id=C1364 | ||
|description=CAGE_peak_4_at_GLS2_5end | |description=CAGE_peak_4_at_GLS2_5end | ||
|id=chr12:56881874..56881907,- | |id=chr12:56881874..56881907,- | ||
|ontology_enrichment_celltype=CL:0000223!1.29e-11!59;CL:0002076!2.28e-10!43;CL:0000066!2.49e-09!254;CL:0002251!2.97e-07!21 | |ontology_enrichment_celltype=CL:0000223!1.29e-11!59;CL:0002076!2.28e-10!43;CL:0000066!2.49e-09!254;CL:0002251!2.97e-07!21 | ||
|ontology_enrichment_celltype_v019=CL:0002322;8.44e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,6.27e-07,5;CL:0000223,8.23e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.40e-13;82 | |||
|ontology_enrichment_disease=DOID:305!2.15e-11!106;DOID:0050687!1.98e-09!143 | |ontology_enrichment_disease=DOID:305!2.15e-11!106;DOID:0050687!1.98e-09!143 | ||
|ontology_enrichment_disease_v019=DOID:1749;4.26e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.12e-08,106;DOID:1749,4.97e-07,14 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001869;8.45e-26;32!UBERON:0003528;6.97e-25;34!UBERON:0002020;6.97e-25;34!UBERON:0002780;9.49e-25;41!UBERON:0001890;9.49e-25;41!UBERON:0000073;5.79e-24;53!UBERON:0002616;5.79e-24;53!UBERON:0002791;8.78e-24;32!UBERON:0001893;1.83e-23;34!UBERON:0001950;6.08e-23;20!UBERON:0002619;8.10e-23;22!UBERON:0000956;1.86e-19;25!UBERON:0000203;1.86e-19;25!UBERON:0000955;2.80e-18;68!UBERON:0001017;2.49e-17;75!UBERON:0001016;1.79e-13;83!UBERON:0000125;3.15e-11;9!UBERON:0002308;3.15e-11;9!UBERON:0000200;7.18e-11;6!UBERON:0002420;8.71e-11;9!UBERON:0007245;8.71e-11;9!UBERON:0010009;8.71e-11;9!UBERON:0010011;8.71e-11;9!UBERON:0000454;8.71e-11;9!UBERON:0001894;1.66e-10;7!UBERON:0004733;1.93e-10;12!UBERON:0002028;1.93e-10;12!UBERON:0002298;8.53e-10;6!UBERON:0004732;1.83e-09;13!UBERON:0009663;2.53e-08;7!UBERON:0007023;3.42e-08;114!UBERON:0001871;5.22e-08;6!UBERON:0011216;1.85e-07;132!UBERON:0002365;2.89e-07;31!UBERON:0002330;2.89e-07;31!UBERON:0000369;2.91e-07;4!UBERON:0002435;2.91e-07;4!UBERON:0000204;2.91e-07;4!UBERON:0002680;4.63e-07;9!UBERON:0001895;4.63e-07;9!UBERON:0003296;7.58e-07;4!UBERON:0010133;7.58e-07;4 | |||
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| ||
|short_description=p4@GLS2 | |short_description=p4@GLS2 | ||
}} | }} |
Latest revision as of 11:08, 19 September 2015
Short description: | p4@GLS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GLS2_5end |
Coexpression cluster: | C1364_Hepatocyte_liver_occipital_cerebellum_somatostatinoma_small_pancreas |
Association with transcript: | 0bp_to_ENST00000539272_5end |
EntrezGene: | GLS2 |
HGNC: | 29570 |
UniProt: | A8K0A6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 6.27e-07 | 5 |
endodermal cell | 8.23e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.12e-08 | 106 |
squamous cell carcinoma | 4.97e-07 | 14 |