FFCP PHASE1:Hg19::chr11:828151..828163,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=283229 | |EntrezGene=283229 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28703 | |HGNC=28703 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-66bp_to_uc001lrv.2_5end | |association_with_transcript=-66bp_to_uc001lrv.2_5end | ||
|cluster_id=chr11:828151..828163,+ | |||
|coexpression_cluster_id=C108 | |coexpression_cluster_id=C108 | ||
|description=CAGE_peak_14_at_EFCAB4A_5end | |description=CAGE_peak_14_at_EFCAB4A_5end | ||
|id=chr11:828151..828163,+ | |id=chr11:828151..828163,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002327;6.50e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002327,6.50e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0008425;1.06e-23;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5093;6.50e-07;4!DOID:1612;6.50e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,6.50e-07,4;DOID:1612,6.50e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0000160!5.65e-17!27;UBERON:0000059!7.56e-17!11;UBERON:0005409!8.93e-13!35;UBERON:0004907!4.54e-10!5;UBERON:0001155!1.26e-09!9 | |ontology_enrichment_uberon=UBERON:0000160!5.65e-17!27;UBERON:0000059!7.56e-17!11;UBERON:0005409!8.93e-13!35;UBERON:0004907!4.54e-10!5;UBERON:0001155!1.26e-09!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;5.76e-20;17!UBERON:0002108;1.62e-18;4!UBERON:0005409;9.84e-16;22!UBERON:0004921;1.03e-09;33!UBERON:0000059;5.00e-09;11!UBERON:0002114;1.21e-08;2!UBERON:0001911;6.50e-07;4!UBERON:0001052;8.61e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.29e-20,17;UBERON:0002108,1.24e-18,4;UBERON:0005409,4.65e-14,25;UBERON:0000059,4.43e-09,11;UBERON:0002114,1.04e-08,2;UBERON:0001911,6.50e-07,4;UBERON:0005333,6.50e-07,4;UBERON:0008425,6.50e-07,4;UBERON:0005311,6.50e-07,4;UBERON:0001052,7.27e-07,4 | |||
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|short_description=p14@EFCAB4A | |short_description=p14@EFCAB4A | ||
}} | }} |
Latest revision as of 18:32, 24 September 2015
Short description: | p14@EFCAB4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_EFCAB4A_5end |
Coexpression cluster: | C108_breast_hepatoblastoma_MCF7_parotid_salivary_submaxillary_prostate |
Association with transcript: | -66bp_to_uc001lrv.2_5end |
EntrezGene: | EFCAB4A |
HGNC: | 28703 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 6.50e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.29e-20 | 17 |
small intestine | 1.24e-18 | 4 |
gastrointestinal system | 4.65e-14 | 25 |
large intestine | 4.43e-09 | 11 |
duodenum | 1.04e-08 | 2 |
mammary gland | 6.50e-07 | 4 |
mammary bud | 6.50e-07 | 4 |
mammary ridge | 6.50e-07 | 4 |
mammary placode | 6.50e-07 | 4 |
rectum | 7.27e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 6.50e-07 | 4 |
breast cancer | 6.50e-07 | 4 |