FFCP PHASE1:Hg19::chr11:33718564..33718585,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-317bp_to_ENST00000534431_5end | |association_with_transcript=-317bp_to_ENST00000534431_5end | ||
|cluster_id=chr11:33718564..33718585,- | |||
|description=CAGE_peak_1_at_ENST00000534431_5end | |description=CAGE_peak_1_at_ENST00000534431_5end | ||
|id=chr11:33718564..33718585,- | |id=chr11:33718564..33718585,- | ||
|ontology_enrichment_celltype=CL:1000507!7.99e-16!12;CL:1000494!7.99e-16!12;CL:1000449!7.99e-12!16;CL:0000239!2.29e-11!3;CL:1000615!2.29e-11!3;CL:0002306!2.29e-11!3;CL:1000497!1.73e-10!18;CL:0002518!1.73e-10!18;CL:0002681!1.04e-09!13;CL:0002584!1.04e-09!13 | |ontology_enrichment_celltype=CL:1000507!7.99e-16!12;CL:1000494!7.99e-16!12;CL:1000449!7.99e-12!16;CL:0000239!2.29e-11!3;CL:1000615!2.29e-11!3;CL:0002306!2.29e-11!3;CL:1000497!1.73e-10!18;CL:0002518!1.73e-10!18;CL:0002681!1.04e-09!13;CL:0002584!1.04e-09!13 | ||
|ontology_enrichment_celltype_v019=CL:0000239;1.23e-38;3!CL:1000615;1.23e-38;3!CL:0002306;1.23e-38;3!CL:1000507;4.46e-26;10!CL:1000494;4.46e-26;10!CL:0002681;7.04e-22;12!CL:0002584;7.04e-22;12!CL:1000449;1.13e-17;15!CL:1000497;1.09e-15;17!CL:0002518;1.09e-15;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.49e-38,3;CL:1000615,1.49e-38,3;CL:0002306,1.49e-38,3;CL:1000507,4.66e-26,10;CL:1000494,4.66e-26,10;CL:0002681,7.30e-22,12;CL:0002584,7.30e-22,12;CL:1000449,1.17e-17,15;CL:1000497,1.12e-15,17;CL:0002518,1.12e-15,17 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3112!1.42e-08!1 | |ontology_enrichment_disease=DOID:3112!1.42e-08!1 | ||
|ontology_enrichment_disease_v019=DOID:4468;1.24e-15;2!DOID:3493;1.54e-15;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,1.15e-15,2;DOID:3493,1.54e-15,2 | |||
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|ontology_enrichment_uberon_v019=UBERON:0006853;1.23e-38;3!UBERON:0007685;1.23e-38;3!UBERON:0004134;1.23e-38;3!UBERON:0004211;4.46e-26;10!UBERON:0009773;4.46e-26;10!UBERON:0001231;4.46e-26;10!UBERON:0004810;4.46e-26;10!UBERON:0001225;7.04e-22;12!UBERON:0008987;7.04e-22;12!UBERON:0002113;2.56e-19;24!UBERON:0011143;2.56e-19;24!UBERON:0001851;1.13e-17;15!UBERON:0006555;1.13e-17;15!UBERON:0000353;1.13e-17;15!UBERON:0004819;1.13e-17;15!UBERON:0001285;1.13e-17;15!UBERON:0007684;1.13e-17;15!UBERON:0000489;4.32e-16;29!UBERON:0006554;1.42e-15;30!UBERON:0001008;1.42e-15;30!UBERON:0005172;2.09e-07;52!UBERON:0005173;2.09e-07;52 | |||
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|short_description=p1@ENST00000534431 | |short_description=p1@ENST00000534431 | ||
}} | }} |
Latest revision as of 21:39, 23 July 2015
Short description: | p1@ENST00000534431 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000534431_5end |
Coexpression cluster: | NA |
Association with transcript: | -317bp_to_ENST00000534431_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.49e-38 | 3 |
kidney cortex tubule cell | 1.49e-38 | 3 |
epithelial cell of proximal tubule | 1.49e-38 | 3 |
kidney tubule cell | 4.66e-26 | 10 |
nephron tubule epithelial cell | 4.66e-26 | 10 |
kidney cortical cell | 7.30e-22 | 12 |
renal cortical epithelial cell | 7.30e-22 | 12 |
epithelial cell of nephron | 1.17e-17 | 15 |
kidney cell | 1.12e-15 | 17 |
kidney epithelial cell | 1.12e-15 | 17 |
Ontology term | p-value | n |
---|---|---|
renal cortex tubule | 1.49e-38 | 3 |
region of nephron tubule | 1.49e-38 | 3 |
proximal tubule | 1.49e-38 | 3 |
nephron tubule epithelium | 4.66e-26 | 10 |
cortex of kidney | 7.30e-22 | 12 |
renal parenchyma | 7.30e-22 | 12 |
kidney | 7.03e-18 | 26 |
kidney mesenchyme | 7.03e-18 | 26 |
upper urinary tract | 7.03e-18 | 26 |
kidney rudiment | 7.03e-18 | 26 |
kidney field | 7.03e-18 | 26 |
cortex | 1.17e-17 | 15 |
nephron epithelium | 1.17e-17 | 15 |
renal tubule | 1.17e-17 | 15 |
parenchyma | 1.17e-17 | 15 |
nephron tubule | 1.17e-17 | 15 |
nephron | 1.17e-17 | 15 |
uriniferous tubule | 1.17e-17 | 15 |
nephrogenic mesenchyme | 1.17e-17 | 15 |
excretory tube | 1.32e-16 | 16 |
kidney epithelium | 1.32e-16 | 16 |
cavitated compound organ | 4.33e-15 | 31 |
urinary system structure | 3.97e-10 | 47 |
renal system | 6.31e-10 | 48 |
abdomen element | 7.12e-09 | 54 |
abdominal segment element | 7.12e-09 | 54 |
abdominal segment of trunk | 4.98e-08 | 60 |
abdomen | 4.98e-08 | 60 |
compound organ | 3.93e-07 | 68 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 1.15e-15 | 2 |
signet ring cell adenocarcinoma | 1.54e-15 | 2 |