FFCP PHASE1:Hg19::chr22:19950126..19950137,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1312 | |EntrezGene=1312 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2228 | |HGNC=2228 | ||
|TSSclassifier=strong | |||
|UniProt=P21964 | |UniProt=P21964 | ||
|association_with_transcript=56bp_to_ENST00000449653,NM_007310_5end | |association_with_transcript=56bp_to_ENST00000449653,NM_007310_5end | ||
|cluster_id=chr22:19950126..19950137,+ | |||
|coexpression_cluster_id=C2638 | |||
|description=CAGE_peak_14_at_COMT_5end | |description=CAGE_peak_14_at_COMT_5end | ||
|id=chr22:19950126..19950137,+ | |id=chr22:19950126..19950137,+ | ||
|ontology_enrichment_celltype=CL:0000066!2.86e-12!254;CL:0000223!1.06e-09!59;CL:0002076!8.68e-09!43 | |ontology_enrichment_celltype=CL:0000066!2.86e-12!254;CL:0000223!1.06e-09!59;CL:0002076!8.68e-09!43 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.29e-13;12!CL:0002327;8.61e-11;4!CL:0002536;1.35e-10;2!CL:0000349;4.40e-08;19!CL:0002541;9.33e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,3.31e-14,58;CL:0000182,1.62e-13,12;CL:0000066,3.46e-11,253;CL:0002327,8.80e-11,4;CL:0002536,1.68e-10,2;CL:0000349,3.48e-08,19;CL:0002541,7.38e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.51e-10;11!UBERON:0009497;1.09e-08;13!UBERON:0001041;1.30e-08;30!CL:0000223;2.70e-07;58 | |||
|ontology_enrichment_disease=DOID:299!4.72e-07!25;DOID:305!5.32e-07!106 | |ontology_enrichment_disease=DOID:299!4.72e-07!25;DOID:305!5.32e-07!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,7.19e-11,106;DOID:0050687,5.40e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.00e-09!169;UBERON:0000925!2.00e-09!169;UBERON:0006595!2.00e-09!169;UBERON:0001007!1.66e-08!155;UBERON:0001555!1.66e-08!155;UBERON:0007026!1.66e-08!155;UBERON:0009569!2.28e-07!113;UBERON:0005911!2.28e-07!82;UBERON:0000466!2.42e-07!126 | |ontology_enrichment_uberon=UBERON:0004119!2.00e-09!169;UBERON:0000925!2.00e-09!169;UBERON:0006595!2.00e-09!169;UBERON:0001007!1.66e-08!155;UBERON:0001555!1.66e-08!155;UBERON:0007026!1.66e-08!155;UBERON:0009569!2.28e-07!113;UBERON:0005911!2.28e-07!82;UBERON:0000466!2.42e-07!126 | ||
|ontology_enrichment_uberon_v019=UBERON:0002365;3.43e-18;31!UBERON:0002330;3.43e-18;31!UBERON:0002107;2.27e-14;19!UBERON:0006925;2.27e-14;19!UBERON:0002423;2.48e-13;25!UBERON:0005631;3.63e-11;10!UBERON:0000158;3.63e-11;10!UBERON:0001911;8.61e-11;4!UBERON:0002368;4.47e-07;33!UBERON:0003124;9.33e-07;3!UBERON:0000920;9.33e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002365,9.72e-19,31;UBERON:0002330,9.72e-19,31;UBERON:0002107,1.80e-14,19;UBERON:0006925,1.80e-14,19;UBERON:0008836,1.80e-14,19;UBERON:0007499,1.54e-13,25;UBERON:0009497,2.26e-13,25;UBERON:0000015,2.26e-13,25;UBERON:0002423,2.26e-13,25;UBERON:0006235,2.26e-13,25;UBERON:0004161,2.26e-13,25;UBERON:0009856,5.90e-13,26;UBERON:0008835,2.56e-12,22;UBERON:0003894,2.56e-12,22;UBERON:0009854,1.00e-11,23;UBERON:0005631,2.44e-11,14;UBERON:0000158,2.44e-11,14;UBERON:0001911,8.80e-11,4;UBERON:0005333,8.80e-11,4;UBERON:0008425,8.80e-11,4;UBERON:0005311,8.80e-11,4;UBERON:0005177,3.33e-10,101;UBERON:0009569,3.75e-10,112;UBERON:0005172,1.54e-09,54;UBERON:0005173,1.54e-09,54;UBERON:0004921,2.84e-09,118;UBERON:0005911,3.48e-09,82;UBERON:0001007,1.06e-08,145;UBERON:0001555,1.06e-08,145;UBERON:0007026,1.06e-08,145;UBERON:0002530,1.16e-08,59;UBERON:0004119,1.93e-08,160;UBERON:0000925,1.93e-08,160;UBERON:0006595,1.93e-08,160;UBERON:0001041,2.33e-08,87;UBERON:0002417,2.40e-08,60;UBERON:0000916,2.40e-08,60;UBERON:0003929,4.31e-08,54;UBERON:0002368,2.92e-07,35;UBERON:0000920,7.38e-07,3;UBERON:0000949,9.93e-07,45;UBERON:0001048,9.93e-07,160 | |||
|phase1_expression=0,0,0.140954404095971,0,0.446961094427288,0.872338524100369,0,0,0,0,0,2.18441372130172,4.22027165165526,0.123766352960047,0,0,0,0,0.487932798790507,0,0.204000691244253,0.313454721478088,0,0.136874425072884,0,0,0,0,0,0,0.154816123316076,1.83884244895785,0,0.369754010166788,0,0,0,0,0,0,0.447830948479849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0.251248665256743,0,0,0.605399502633369,0,0,0.211255286311942,0.212604299965044,0,0.112328631146495,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0.361439152384566,0,0.289693037921647,0,0,0.189069634328136,0.221729397462564,0.175669571386252,0.392937226493138,0,2.22470665670658,0,0,0.132957960518865,0,0,0,0.198762407366705,0,0,0.56530794192401,0,0,0,0.258416759169329,0,0,0,0,0.488124115096339,0,0,0,0,0,0,0.949265659568129,0,0,0,0.436094052142534,0.496971951695318,0,0.132409180813219,0,0,0.560677600142307,0,0,0,0,0.163461903113459,0,0,0.468642863667593,0,0,0.298897361103602,0,0,0,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0,0.277064115484183,0,0,0,0,0.179389635688862,0,0,0,0.103052529238439,0,0,0,0.0974370051611986,0,0,0,0,0.10075209822764,0,0.386521706326594,0,0.286804595389004,0.121973706129595,0.132529768321485,0.116193942869518,0.207322110030741,0.504641701751257,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,2.53510069643662,5.89696330006576,1.77236972004421,0,4.18160691046586,0,0.439001141634502,0,0.301586917234893,0.833296006426766,0.325808305310325,0,0,0.115930404975077,0,0,0,0.190254152234598,0.790204397959275,2.57545848628462,0,0,0,0,0.16798212819886,0.283550194484773,0,1.74380363108377,1.15014803749563,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0.129271715757778,0,0,0,0,0,1.41849132023278,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410952645100767,0.358121926479791,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0,0.500170521059677,0,0,0,0,0.234282829985426,0,0,0,0,0,0.173767228936166,0.195801157462741,0,0,0,0,0,0,2.72151263996712,0,0,0,0.128139149255701,0.511707249066704,0,0,0.154209693802656,0,0,0,0,0.966875596732978,0.200506470303285,0.0920809889358963,0,0,0.131124414959424,0.451199612907412,0.0770153371044148,0,1.46139224653261,0,1.13733384070897,0,0,0,0,0.501689773854853,0.509752546090077,0.831076008928724,0,0,0,0,0.328014645699706,0,9.17065003664728,0.0915694648183434,0.247528499761764,0.574265537996172,0,0,0,0,0.15350367472613,0,0,0,0,0,0.165284915360978,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0.316379424718726,0.190630193923825,0,0,0.95460974377781,0,0,0,0,0.202182481573316,0,0,0,0.243713489631284,0,0.136499911407986,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0.384888450902048,0.670302275535787,0,10.4499618862225,0.43050537267123,0,0.443430153536676,0.459446800413919,0,0,0,0,0,0.648473311192717,0,0,0.213648142254946,0,0.980160863924127,0,0,0,0,0.199579371432817,0,0,0.324621940274555,0.561594356226918,0,0.156679895773023,0,0,0,0,0,0,0.307240764308458,0,0.166849141711909,0,0,0,0,0,0,0.561421621224659,0,0.121360521749513,0,0,0.95497793895076,0.890894042497916,1.84296421259539,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0.179021174675609,0.511572370226872,0.295930216910801,0,0,0.969332746095218,0,0,0.520855522170466,4.37299999980979,0,1.365521379426,2.2882828526349,4.25497827182285,0,0,0,0,0.120596438625408,0,0,0,0,0,0.139423744278603,0.230850775511391,0,0,0,0.217294743844016,1.5950057986596,0,1.5991043280559,0,0.156980256395025,0,0,0,0,0,0,0,0.652931232636591,1.27217764290547,0,1.99052386215701,0.0884575645033392,0,0,0.123563938946503,0,0.134802265961354,0,0.702793337176017,0,1.17398771359254,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0.569219092059585,0,1.90915712168644,0.0979923974143777,0,1.04836000945218,0,0,0,0.0821154570532092,0.581934098930517,0,0.225980740780532,0.137041924646751,0,0.0633107959558787,1.17330829640882,0.0801588202515337,0.85381197895741,0,1.29681375438695,0,0,0,0,1.41416420770077,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,2.28471228690949,1.81314888438566,2.35912403489647,0,0.0846733320657845,0,0,0.160753148465019,0,0.415440338029185,0,0,0.0607495566580247,1.34173875039706,0.551639951094387,0.629455057619977,0.105600336519406,0,0.191915197319445,0,0,0,0,0,0,0,0,0.170388021785422,0,10.2586563574658,1.32506888912221,0.129282956361551,0.13223260174269,0,0.704815022316672,0.213574825135389,0,0,0,0,0,1.91502377331055,0.544017803369474,0,0,0,0.628216385000937,0,0.122026264901963,0,0,0,0.0620964029413835,0,0,0.151649117541648,0,0,0,0.144921028610825,0,0.233713309847224,0,0,0,0,0,0,0.15543720058278,0,0,0,0.155262956876259,0,0,0,0.150257608997218,0,0,0.181848659202559,0.214821114084977,0,0,0.400027764663154,0.343395705182793,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0.192914038270915,0.337884881306145,0,0,0.303859956177382,0.276516872303462,0,0.132864840313363,0,0,0.491545817507439,0,0,0,0,0,0,0.139879507719444,0.622077260032973,0,0.215649622793364,0,0.109209638192014,0,0,0.247871528518004,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0.138314504928436,0,0,0.588886311006154,0.235939446695481,1.83428598521679,0.115525666150338,0,0,0.198916222116275,0,0,0,0,0.163771917510097,0.147856086217045,0.202612753855184,0,0,0,0,1.09651553371436,0,0,1.14986184875636,0,0,0,0,0.79832133146375,0,0,0.135939465953663,0,0.118193840883968,0.333694205676207,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0.691259661814092,0.430227358820278,0,0.0852134047591577,0,0.9164274741762,0,0,2.23710863595585,0,0.731507549893617,0,0,0,0.485710993059139,0,0,0,0.11294608203896,0,0.150962843566674,0.308696632431779,0.218559560503957,0,0.245148321753905,0,0,0,0,0,0.0939839179798536,0,0,0,0,1.04313776695919,0,0,0.143339583151451,0.157771562193185,0,0,0.5290268405154,0,0,0,0,0,0,0.203977659483963,0.26721740526556,0,0,0.151557396436479,0,0,0,0.426467963801962,0.476128862927481,0,0,0,0.190941474834495,0,0.435433495793923,0.342233301085281,0.336760265072938,1.00411087549747,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0.140954404095971,0,0.446961094427288,0.872338524100369,0,0,0,0,0,2.18441372130172,4.22027165165526,0.123766352960047,0,0,0,0,0.487932798790507,0,0.204000691244253,0.313454721478088,0,0.136874425072884,0,0,0,0,0,0,0.154816123316076,1.83884244895785,0,0.369754010166788,0,0,0,0,0,0,0.447830948479849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0.251248665256743,0,0,0.605399502633369,0,0,0.211255286311942,0.212604299965044,0,0.112328631146495,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0.361439152384566,0,0.289693037921647,0,0,0.189069634328136,0.221729397462564,0.175669571386252,0.392937226493138,0,2.22470665670658,0,0,0.132957960518865,0,0,0,0.198762407366705,0,0,0.56530794192401,0,0,0,0.258416759169329,0,0,0,0,0.488124115096339,0,0,0,0,0,0,0.949265659568129,0,0,0,0.436094052142534,0.496971951695318,0,0.132409180813219,0,0,0.560677600142307,0,0,0,0,0.163461903113459,0,0,0.468642863667593,0,0,0.298897361103602,0,0,0,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0,0.277064115484183,0,0,0,0,0.179389635688862,0,0,0,0.103052529238439,0,0,0,0.0974370051611986,0,0,0,0,0.10075209822764,0,0.386521706326594,0,0.286804595389004,0.121973706129595,0.132529768321485,0.116193942869518,0.207322110030741,0.504641701751257,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,2.53510069643662,5.89696330006576,1.77236972004421,0,4.18160691046586,0,0.439001141634502,0,0.301586917234893,0.833296006426766,0.325808305310325,0,0,0.115930404975077,0,0,0,0.190254152234598,0.790204397959275,2.57545848628462,0,0,0,0,0.16798212819886,0.283550194484773,0,1.74380363108377,1.15014803749563,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0.129271715757778,0,0,0,0,0,1.41849132023278,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410952645100767,0.358121926479791,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0,0.500170521059677,0,0,0,0,0.234282829985426,0,0,0,0,0,0.173767228936166,0.195801157462741,0,0,0,0,0,0,2.72151263996712,0,0,0,0.128139149255701,0.511707249066704,0,0,0.154209693802656,0,0,0,0,0.966875596732978,0.200506470303285,0.0920809889358963,0,0,0.131124414959424,0.451199612907412,0.0770153371044148,0,1.46139224653261,0,1.13733384070897,0,0,0,0,0.501689773854853,0.509752546090077,0.831076008928724,0,0,0,0,0.328014645699706,0,9.17065003664728,0.0915694648183434,0.247528499761764,0.574265537996172,0,0,0,0,0.15350367472613,0,0,0,0,0,0.165284915360978,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0.316379424718726,0.190630193923825,0,0,0.95460974377781,0,0,0,0,0.202182481573316,0,0,0,0.243713489631284,0,0.136499911407986,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0.384888450902048,0.670302275535787,0,10.4499618862225,0.43050537267123,0,0.443430153536676,0.459446800413919,0,0,0,0,0,0.648473311192717,0,0,0.213648142254946,0,0.980160863924127,0,0,0,0,0.199579371432817,0,0,0.324621940274555,0.561594356226918,0,0.156679895773023,0,0,0,0,0,0,0.307240764308458,0,0.166849141711909,0,0,0,0,0,0,0.561421621224659,0,0.121360521749513,0,0,0.95497793895076,0.890894042497916,1.84296421259539,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0.179021174675609,0.511572370226872,0.295930216910801,0,0,0.969332746095218,0,0,0.520855522170466,4.37299999980979,0,1.365521379426,2.2882828526349,4.25497827182285,0,0,0,0,0.120596438625408,0,0,0,0,0,0.139423744278603,0.230850775511391,0,0,0,0.217294743844016,1.5950057986596,0,1.5991043280559,0,0.156980256395025,0,0,0,0,0,0,0,0.652931232636591,1.27217764290547,0,1.99052386215701,0.0884575645033392,0,0,0.123563938946503,0,0.134802265961354,0,0.702793337176017,0,1.17398771359254,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0.569219092059585,0,1.90915712168644,0.0979923974143777,0,1.04836000945218,0,0,0,0.0821154570532092,0.581934098930517,0,0.225980740780532,0.137041924646751,0,0.0633107959558787,1.17330829640882,0.0801588202515337,0.85381197895741,0,1.29681375438695,0,0,0,0,1.41416420770077,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,2.28471228690949,1.81314888438566,2.35912403489647,0,0.0846733320657845,0,0,0.160753148465019,0,0.415440338029185,0,0,0.0607495566580247,1.34173875039706,0.551639951094387,0.629455057619977,0.105600336519406,0,0.191915197319445,0,0,0,0,0,0,0,0,0.170388021785422,0,10.2586563574658,1.32506888912221,0.129282956361551,0.13223260174269,0,0.704815022316672,0.213574825135389,0,0,0,0,0,1.91502377331055,0.544017803369474,0,0,0,0.628216385000937,0,0.122026264901963,0,0,0,0.0620964029413835,0,0,0.151649117541648,0,0,0,0.144921028610825,0,0.233713309847224,0,0,0,0,0,0,0.15543720058278,0,0,0,0.155262956876259,0,0,0,0.150257608997218,0,0,0.181848659202559,0.214821114084977,0,0,0.400027764663154,0.343395705182793,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0.192914038270915,0.337884881306145,0,0,0.303859956177382,0.276516872303462,0,0.132864840313363,0,0,0.491545817507439,0,0,0,0,0,0,0.139879507719444,0.622077260032973,0,0.215649622793364,0,0.109209638192014,0,0,0.247871528518004,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0.138314504928436,0,0,0.588886311006154,0.235939446695481,1.83428598521679,0.115525666150338,0,0,0.198916222116275,0,0,0,0,0.163771917510097,0.147856086217045,0.202612753855184,0,0,0,0,1.09651553371436,0,0,1.14986184875636,0,0,0,0,0.79832133146375,0,0,0.135939465953663,0,0.118193840883968,0.333694205676207,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0.691259661814092,0.430227358820278,0,0.0852134047591577,0,0.9164274741762,0,0,2.23710863595585,0,0.731507549893617,0,0,0,0.485710993059139,0,0,0,0.11294608203896,0,0.150962843566674,0.308696632431779,0.218559560503957,0,0.245148321753905,0,0,0,0,0,0.0939839179798536,0,0,0,0,1.04313776695919,0,0,0.143339583151451,0.157771562193185,0,0,0.5290268405154,0,0,0,0,0,0,0.203977659483963,0.26721740526556,0,0,0.151557396436479,0,0,0,0.426467963801962,0.476128862927481,0,0,0,0.190941474834495,0,0.435433495793923,0.342233301085281,0.336760265072938,1.00411087549747,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p14@COMT | |short_description=p14@COMT | ||
}} | }} |
Latest revision as of 04:08, 19 September 2015
Short description: | p14@COMT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_COMT_5end |
Coexpression cluster: | C2638_breast_bronchogenic_Amniotic_liver_endometrioid_Hepatocyte_serous |
Association with transcript: | 56bp_to_ENST00000449653, NM_007310_5end |
EntrezGene: | COMT |
HGNC: | 2228 |
UniProt: | P21964 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 3.31e-14 | 58 |
hepatocyte | 1.62e-13 | 12 |
epithelial cell | 3.46e-11 | 253 |
mammary gland epithelial cell | 8.80e-11 | 4 |
amniotic epithelial cell | 1.68e-10 | 2 |
extraembryonic cell | 3.48e-08 | 19 |
chorionic membrane mesenchymal stem cell | 7.38e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 7.19e-11 | 106 |
cell type cancer | 5.40e-07 | 143 |