FFCP PHASE1:Hg19::chr16:552735..552764,+: Difference between revisions
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|id=chr16:552735..552764,+
|short_description=p3@RAB11FIP3
|description=CAGE_peak_3_at_RAB11FIP3_5end
|association_with_transcript=0bp_to_ENST00000487899_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9727 | |EntrezGene=9727 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17224 | |HGNC=17224 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000487899_5end | |||
|cluster_id=chr16:552735..552764,+ | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_3_at_RAB11FIP3_5end | |||
|id=chr16:552735..552764,+ | |||
|ontology_enrichment_celltype=CL:0000181!8.82e-19!12;CL:0000417!8.82e-19!12;CL:0000668!8.82e-19!12;CL:0000414!8.82e-19!12;CL:0000412!8.82e-19!12;CL:0000182!8.82e-19!12;CL:0000223!1.70e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;4.46e-36;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.70e-36,12;CL:0000223,2.43e-11,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;9.59e-39;11!UBERON:0009497;1.06e-32;13!UBERON:0003104;4.16e-13;31!UBERON:0001041;2.78e-10;30!UBERON:0006242;3.78e-10;1!CL:0000223;1.97e-08;58 | |||
|ontology_enrichment_disease=DOID:4929!1.38e-09!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009854!1.01e-22!23;UBERON:0000160!7.13e-22!27;UBERON:0009497!8.81e-21!25;UBERON:0000015!8.81e-21!25;UBERON:0002423!8.81e-21!25;UBERON:0006235!8.81e-21!25;UBERON:0004161!8.81e-21!25;UBERON:0009856!7.75e-20!26;UBERON:0008835!9.52e-20!22;UBERON:0003894!9.52e-20!22;UBERON:0005409!2.95e-19!35;UBERON:0002107!6.09e-19!19;UBERON:0006925!6.09e-19!19;UBERON:0008836!6.09e-19!19;UBERON:0007499!3.84e-17!25;UBERON:0004921!2.71e-15!129;UBERON:0004185!2.71e-15!129;UBERON:0004907!3.58e-15!5;UBERON:0000059!4.34e-15!11;UBERON:0003929!4.51e-14!54;UBERON:0005057!2.13e-13!26;UBERON:0001007!4.43e-13!155;UBERON:0001555!4.43e-13!155;UBERON:0007026!4.43e-13!155;UBERON:0005172!1.22e-11!55;UBERON:0005173!1.22e-11!55;UBERON:0004119!1.56e-11!169;UBERON:0000925!1.56e-11!169;UBERON:0006595!1.56e-11!169;UBERON:0001052!3.41e-11!4;UBERON:0002365!5.68e-11!31;UBERON:0002330!5.68e-11!31;UBERON:0002417!3.18e-10!61;UBERON:0000916!3.18e-10!61;UBERON:0005911!1.46e-09!82;UBERON:0002368!1.56e-09!35;UBERON:0001155!1.15e-08!9;UBERON:0000949!1.19e-08!45;UBERON:0000077!1.59e-08!130;UBERON:0002108!1.20e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.77e-37;19!UBERON:0006925;3.77e-37;19!UBERON:0002423;1.96e-34;25!UBERON:0000160;1.14e-24;17!UBERON:0002365;1.14e-21;31!UBERON:0002330;1.14e-21;31!UBERON:0005409;3.68e-19;22!UBERON:0002368;5.01e-19;33!UBERON:0002108;1.58e-17;4!UBERON:0001007;3.18e-14;81!UBERON:0000949;1.23e-13;43!UBERON:0004921;5.74e-12;33!UBERON:0005172;2.05e-09;52!UBERON:0005173;2.05e-09;52!UBERON:0002417;3.74e-09;58!UBERON:0000916;3.74e-09;58!UBERON:0002530;1.13e-08;57!UBERON:0000059;3.20e-08;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.93e-37,19;UBERON:0006925,3.93e-37,19;UBERON:0008836,3.93e-37,19;UBERON:0009497,2.07e-34,25;UBERON:0000015,2.07e-34,25;UBERON:0002423,2.07e-34,25;UBERON:0006235,2.07e-34,25;UBERON:0004161,2.07e-34,25;UBERON:0008835,6.46e-32,22;UBERON:0003894,6.46e-32,22;UBERON:0009854,1.77e-30,23;UBERON:0007499,5.98e-28,25;UBERON:0009856,7.87e-27,26;UBERON:0000160,1.12e-24,17;UBERON:0002365,2.58e-22,31;UBERON:0002330,2.58e-22,31;UBERON:0003929,5.05e-22,54;UBERON:0002368,1.25e-19,35;UBERON:0004921,1.95e-19,118;UBERON:0002108,1.49e-17,4;UBERON:0001007,2.26e-17,145;UBERON:0001555,2.26e-17,145;UBERON:0007026,2.26e-17,145;UBERON:0005409,7.11e-17,25;UBERON:0004119,1.75e-15,160;UBERON:0000925,1.75e-15,160;UBERON:0006595,1.75e-15,160;UBERON:0005172,3.64e-15,54;UBERON:0005173,3.64e-15,54;UBERON:0000949,5.36e-15,45;UBERON:0005911,7.46e-14,82;UBERON:0002530,8.95e-14,59;UBERON:0002417,1.68e-13,60;UBERON:0000916,1.68e-13,60;UBERON:0011216,4.06e-10,223;UBERON:0000059,3.20e-08,11;UBERON:0005177,2.04e-07,101;UBERON:0005256,3.44e-07,122;UBERON:0001041,3.73e-07,87;UBERON:0000490,8.22e-07,148 | |||
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|short_description=p3@RAB11FIP3 | |||
}} | }} |
Latest revision as of 23:39, 16 September 2015
Short description: | p3@RAB11FIP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RAB11FIP3_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 0bp_to_ENST00000487899_5end |
EntrezGene: | RAB11FIP3 |
HGNC: | 17224 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.70e-36 | 12 |
endodermal cell | 2.43e-11 | 58 |