FFCP PHASE1:Hg19::chr6:30131318..30131342,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=89870 | |EntrezGene=89870 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16284 | |HGNC=16284 | ||
|TSSclassifier=strong | |||
|UniProt=A6NL11 | |UniProt=A6NL11 | ||
|association_with_transcript=-119bp_to_ENST00000376688_5end | |association_with_transcript=-119bp_to_ENST00000376688_5end | ||
|cluster_id=chr6:30131318..30131342,+ | |||
|coexpression_cluster_id=C124 | |||
|description=CAGE_peak_1_at_TRIM15_5end | |description=CAGE_peak_1_at_TRIM15_5end | ||
|id=chr6:30131318..30131342,+ | |id=chr6:30131318..30131342,+ | ||
|ontology_enrichment_celltype=CL:0000181!4.84e-13!12;CL:0000417!4.84e-13!12;CL:0000668!4.84e-13!12;CL:0000414!4.84e-13!12;CL:0000412!4.84e-13!12;CL:0000182!4.84e-13!12;CL:0002178!1.11e-09!3;CL:0000223!6.34e-09!59;CL:0000764!1.46e-07!2;CL:0000765!1.46e-07!2;CL:0000050!1.46e-07!2;CL:0000038!1.46e-07!2;CL:0000558!1.46e-07!2;CL:0000547!1.46e-07!2;CL:0000549!1.46e-07!2;CL:0000550!1.46e-07!2;CL:0000552!1.46e-07!2;CL:1000415!3.06e-07!2 | |ontology_enrichment_celltype=CL:0000181!4.84e-13!12;CL:0000417!4.84e-13!12;CL:0000668!4.84e-13!12;CL:0000414!4.84e-13!12;CL:0000412!4.84e-13!12;CL:0000182!4.84e-13!12;CL:0002178!1.11e-09!3;CL:0000223!6.34e-09!59;CL:0000764!1.46e-07!2;CL:0000765!1.46e-07!2;CL:0000050!1.46e-07!2;CL:0000038!1.46e-07!2;CL:0000558!1.46e-07!2;CL:0000547!1.46e-07!2;CL:0000549!1.46e-07!2;CL:0000550!1.46e-07!2;CL:0000552!1.46e-07!2;CL:1000415!3.06e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.02e-14;12!CL:0000764;2.38e-14;2!CL:0000558;2.38e-14;2!CL:0002563;8.10e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.00e-14,12;CL:0000764,2.73e-14,2;CL:0000765,2.73e-14,2;CL:0000050,2.73e-14,2;CL:0000038,2.73e-14,2;CL:0000558,2.73e-14,2;CL:0000547,2.73e-14,2;CL:0000549,2.73e-14,2;CL:0000550,2.73e-14,2;CL:0000552,2.73e-14,2;CL:0000223,2.10e-08,58;CL:0002563,7.70e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.29e-22;11!UBERON:0009497;4.59e-19;13!UBERON:0003104;4.44e-13;31!UBERON:0006242;1.75e-08;1!UBERON:0001045;4.11e-08;1 | |||
|ontology_enrichment_disease=DOID:3119!4.73e-10!14;DOID:299!1.02e-08!25;DOID:3493!2.53e-07!2;DOID:4929!3.16e-07!2 | |ontology_enrichment_disease=DOID:3119!4.73e-10!14;DOID:299!1.02e-08!25;DOID:3493!2.53e-07!2;DOID:4929!3.16e-07!2 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009497!7.86e-23!25;UBERON:0000015!7.86e-23!25;UBERON:0002423!7.86e-23!25;UBERON:0006235!7.86e-23!25;UBERON:0004161!7.86e-23!25;UBERON:0005409!5.22e-22!35;UBERON:0009854!2.42e-18!23;UBERON:0000160!2.34e-17!27;UBERON:0004921!3.26e-17!129;UBERON:0004185!3.26e-17!129;UBERON:0001007!1.88e-16!155;UBERON:0001555!1.88e-16!155;UBERON:0007026!1.88e-16!155;UBERON:0008835!3.86e-16!22;UBERON:0003894!3.86e-16!22;UBERON:0009856!6.79e-16!26;UBERON:0003929!3.07e-15!54;UBERON:0004119!2.27e-14!169;UBERON:0000925!2.27e-14!169;UBERON:0006595!2.27e-14!169;UBERON:0000059!3.70e-14!11;UBERON:0007499!6.70e-14!25;UBERON:0005057!6.46e-13!26;UBERON:0002107!8.28e-13!19;UBERON:0006925!8.28e-13!19;UBERON:0008836!8.28e-13!19;UBERON:0000077!6.30e-12!130;UBERON:0002294!1.98e-11!7;UBERON:0001173!1.98e-11!7;UBERON:0004912!1.98e-11!7;UBERON:0005172!3.37e-11!55;UBERON:0005173!3.37e-11!55;UBERON:0004907!8.56e-11!5;UBERON:0002110!2.05e-10!3;UBERON:0006242!2.05e-10!3;UBERON:0002417!1.01e-09!61;UBERON:0000916!1.01e-09!61;UBERON:0005911!1.34e-09!82;UBERON:0001155!2.50e-09!9;UBERON:0001052!5.61e-08!4;UBERON:0001041!7.72e-08!98;UBERON:0002368!1.78e-07!35;UBERON:0002365!3.69e-07!31;UBERON:0002330!3.69e-07!31;UBERON:0005177!6.57e-07!107 | |ontology_enrichment_uberon=UBERON:0009497!7.86e-23!25;UBERON:0000015!7.86e-23!25;UBERON:0002423!7.86e-23!25;UBERON:0006235!7.86e-23!25;UBERON:0004161!7.86e-23!25;UBERON:0005409!5.22e-22!35;UBERON:0009854!2.42e-18!23;UBERON:0000160!2.34e-17!27;UBERON:0004921!3.26e-17!129;UBERON:0004185!3.26e-17!129;UBERON:0001007!1.88e-16!155;UBERON:0001555!1.88e-16!155;UBERON:0007026!1.88e-16!155;UBERON:0008835!3.86e-16!22;UBERON:0003894!3.86e-16!22;UBERON:0009856!6.79e-16!26;UBERON:0003929!3.07e-15!54;UBERON:0004119!2.27e-14!169;UBERON:0000925!2.27e-14!169;UBERON:0006595!2.27e-14!169;UBERON:0000059!3.70e-14!11;UBERON:0007499!6.70e-14!25;UBERON:0005057!6.46e-13!26;UBERON:0002107!8.28e-13!19;UBERON:0006925!8.28e-13!19;UBERON:0008836!8.28e-13!19;UBERON:0000077!6.30e-12!130;UBERON:0002294!1.98e-11!7;UBERON:0001173!1.98e-11!7;UBERON:0004912!1.98e-11!7;UBERON:0005172!3.37e-11!55;UBERON:0005173!3.37e-11!55;UBERON:0004907!8.56e-11!5;UBERON:0002110!2.05e-10!3;UBERON:0006242!2.05e-10!3;UBERON:0002417!1.01e-09!61;UBERON:0000916!1.01e-09!61;UBERON:0005911!1.34e-09!82;UBERON:0001155!2.50e-09!9;UBERON:0001052!5.61e-08!4;UBERON:0001041!7.72e-08!98;UBERON:0002368!1.78e-07!35;UBERON:0002365!3.69e-07!31;UBERON:0002330!3.69e-07!31;UBERON:0005177!6.57e-07!107 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;8.42e-45;17!UBERON:0005409;1.18e-34;22!UBERON:0002108;7.55e-23;4!UBERON:0000059;3.36e-22;11!UBERON:0004921;4.63e-22;33!UBERON:0002423;3.60e-21;25!UBERON:0001155;3.21e-19;9!UBERON:0002107;2.74e-17;19!UBERON:0006925;2.74e-17;19!UBERON:0001007;7.41e-14;81!UBERON:0004907;8.84e-13;5!UBERON:0002114;5.06e-10;2!UBERON:0002365;7.99e-10;31!UBERON:0002330;7.99e-10;31!UBERON:0002368;8.34e-09;33!UBERON:0001154;4.11e-08;1!UBERON:0001153;4.11e-08;1!UBERON:0009854;4.11e-08;1!UBERON:0004913;6.24e-08;1!UBERON:0003703;6.24e-08;1!UBERON:0001174;6.24e-08;1!UBERON:0004914;6.24e-08;1!UBERON:0001242;8.10e-08;4!UBERON:0001262;8.10e-08;4!UBERON:0004786;8.10e-08;4!UBERON:0004808;8.10e-08;4!UBERON:0001277;8.10e-08;4!UBERON:0001555;9.37e-08;54!UBERON:0001052;1.05e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.43e-45,17;UBERON:0005409,1.96e-30,25;UBERON:0009854,5.79e-23,23;UBERON:0002108,8.22e-23,4;UBERON:0000059,3.24e-22,11;UBERON:0009497,3.73e-21,25;UBERON:0000015,3.73e-21,25;UBERON:0002423,3.73e-21,25;UBERON:0006235,3.73e-21,25;UBERON:0004161,3.73e-21,25;UBERON:0009856,3.72e-20,26;UBERON:0001155,3.33e-19,9;UBERON:0008835,4.15e-19,22;UBERON:0003894,4.15e-19,22;UBERON:0004921,1.81e-17,118;UBERON:0002107,2.78e-17,19;UBERON:0006925,2.78e-17,19;UBERON:0008836,2.78e-17,19;UBERON:0007499,1.10e-16,25;UBERON:0003929,2.55e-16,54;UBERON:0001007,2.85e-15,145;UBERON:0001555,2.85e-15,145;UBERON:0007026,2.85e-15,145;UBERON:0004119,1.74e-13,160;UBERON:0000925,1.74e-13,160;UBERON:0006595,1.74e-13,160;UBERON:0004907,8.14e-13,5;UBERON:0002365,2.84e-10,31;UBERON:0002330,2.84e-10,31;UBERON:0005911,5.37e-10,82;UBERON:0002114,5.42e-10,2;UBERON:0005172,4.70e-09,54;UBERON:0005173,4.70e-09,54;UBERON:0002368,5.29e-09,35;UBERON:0011216,1.93e-08,223;UBERON:0001154,4.41e-08,1;UBERON:0001153,4.41e-08,1;UBERON:0001045,4.41e-08,1;UBERON:0002417,5.21e-08,60;UBERON:0000916,5.21e-08,60;UBERON:0004913,6.68e-08,1;UBERON:0003703,6.68e-08,1;UBERON:0001174,6.68e-08,1;UBERON:0004914,6.68e-08,1;UBERON:0001242,7.70e-08,4;UBERON:0001262,7.70e-08,4;UBERON:0004786,7.70e-08,4;UBERON:0004808,7.70e-08,4;UBERON:0001277,7.70e-08,4;UBERON:0001052,9.46e-08,4;UBERON:0000949,8.14e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0956652079634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.232387885739037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,7.86261773342101,0.590789906681404,0,4.42758378755209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.80125358039787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53481913652154,2.0914836081992,0,0,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0,0.33307196799782,0,3.92995134857262,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21027132424918,0,0,0,0,0.718946809178615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.583209226766509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,1.43042921082341,0,0,2.68570835724488,0,8.95735737970654,5.21899630569701,5.49927130440263,0,0,0,0,0,0,0,0,0,0,10.8891644443797,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0,0.391102765469606,0.801588202515337,6.83049583165928,0.39961921916426,0.288180834308212,0,0,0,0,0.707082103850386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.69033142378851,9.64265543059648,10.9867776482321,0.984274815147488,0,0,0,0.160753148465019,0.412618309791701,0.415440338029185,0,0,0,0,1.65491985328316,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,1.02586563574658,3.97520666736664,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33070477595341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560544326627578,2.73947616152849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7492824225286,0,0,0,0.196300467230486,3.29178397452127,0,0,0,0,0,0,0,0,0,0,14.5087417242936,27.1013855024907,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0.157771562193185,0,0,4.2322147241232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0.215166616178029,0,0,0,0,0.269475606319761,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0956652079634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.232387885739037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,7.86261773342101,0.590789906681404,0,4.42758378755209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.80125358039787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53481913652154,2.0914836081992,0,0,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0,0.33307196799782,0,3.92995134857262,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21027132424918,0,0,0,0,0.718946809178615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.583209226766509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,1.43042921082341,0,0,2.68570835724488,0,8.95735737970654,5.21899630569701,5.49927130440263,0,0,0,0,0,0,0,0,0,0,10.8891644443797,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0,0.391102765469606,0.801588202515337,6.83049583165928,0.39961921916426,0.288180834308212,0,0,0,0,0.707082103850386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.69033142378851,9.64265543059648,10.9867776482321,0.984274815147488,0,0,0,0.160753148465019,0.412618309791701,0.415440338029185,0,0,0,0,1.65491985328316,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,1.02586563574658,3.97520666736664,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33070477595341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560544326627578,2.73947616152849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7492824225286,0,0,0,0.196300467230486,3.29178397452127,0,0,0,0,0,0,0,0,0,0,14.5087417242936,27.1013855024907,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0.157771562193185,0,0,4.2322147241232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0.215166616178029,0,0,0,0,0.269475606319761,0,0,0,0,0,0 | ||
|short_description=p1@TRIM15 | |short_description=p1@TRIM15 | ||
}} | }} |
Latest revision as of 15:55, 17 September 2015
Short description: | p1@TRIM15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TRIM15_5end |
Coexpression cluster: | C124_small_temporal_duodenum_colon_gall_signet_Hepatocyte |
Association with transcript: | -119bp_to_ENST00000376688_5end |
EntrezGene: | TRIM15 |
HGNC: | 16284 |
UniProt: | A6NL11 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.00e-14 | 12 |
erythroid lineage cell | 2.73e-14 | 2 |
erythroblast | 2.73e-14 | 2 |
megakaryocyte-erythroid progenitor cell | 2.73e-14 | 2 |
erythroid progenitor cell | 2.73e-14 | 2 |
reticulocyte | 2.73e-14 | 2 |
proerythroblast | 2.73e-14 | 2 |
basophilic erythroblast | 2.73e-14 | 2 |
polychromatophilic erythroblast | 2.73e-14 | 2 |
orthochromatic erythroblast | 2.73e-14 | 2 |
endodermal cell | 2.10e-08 | 58 |
intestinal epithelial cell | 7.70e-08 | 4 |