FFCP PHASE1:Hg19::chr4:75719725..75719739,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=685 | |EntrezGene=685 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1121 | |HGNC=1121 | ||
|TSSclassifier=strong | |||
|UniProt=P35070 | |UniProt=P35070 | ||
|association_with_transcript=142bp_to_NM_001729,uc003hig.2_5end | |association_with_transcript=142bp_to_NM_001729,uc003hig.2_5end | ||
|cluster_id=chr4:75719725..75719739,- | |||
|description=CAGE_peak_1_at_BTC_5end | |description=CAGE_peak_1_at_BTC_5end | ||
|id=chr4:75719725..75719739,- | |id=chr4:75719725..75719739,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000159;6.58e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000159,4.88e-07,2;CL:1000415,7.90e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.91e-11!106;DOID:0050687!5.59e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:299;4.61e-10;25 | |||
|ontology_enrichment_disease_v019_2=DOID:299,4.79e-10,25;DOID:305,3.55e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.35e-22!115;UBERON:0000481!8.96e-16!347;UBERON:0004119!1.79e-12!169;UBERON:0000925!1.79e-12!169;UBERON:0006595!1.79e-12!169;UBERON:0001007!3.61e-12!155;UBERON:0001555!3.61e-12!155;UBERON:0007026!3.61e-12!155;UBERON:0004921!7.46e-11!129;UBERON:0004185!7.46e-11!129;UBERON:0000153!1.22e-09!129;UBERON:0007811!1.22e-09!129;UBERON:0000033!7.83e-09!123;UBERON:0000077!1.39e-08!130;UBERON:0003056!1.83e-08!61;UBERON:0002616!8.29e-08!59;UBERON:0003080!8.49e-08!42;UBERON:0005409!1.06e-07!35;UBERON:0000062!1.18e-07!511;UBERON:0001049!1.31e-07!57;UBERON:0005068!1.31e-07!57;UBERON:0006241!1.31e-07!57;UBERON:0007135!1.31e-07!57;UBERON:0003075!1.92e-07!86;UBERON:0007284!1.92e-07!86;UBERON:0002780!2.72e-07!41;UBERON:0001890!2.72e-07!41;UBERON:0006240!2.72e-07!41;UBERON:0000922!4.75e-07!612;UBERON:0000475!5.11e-07!365 | |ontology_enrichment_uberon=UBERON:0007023!1.35e-22!115;UBERON:0000481!8.96e-16!347;UBERON:0004119!1.79e-12!169;UBERON:0000925!1.79e-12!169;UBERON:0006595!1.79e-12!169;UBERON:0001007!3.61e-12!155;UBERON:0001555!3.61e-12!155;UBERON:0007026!3.61e-12!155;UBERON:0004921!7.46e-11!129;UBERON:0004185!7.46e-11!129;UBERON:0000153!1.22e-09!129;UBERON:0007811!1.22e-09!129;UBERON:0000033!7.83e-09!123;UBERON:0000077!1.39e-08!130;UBERON:0003056!1.83e-08!61;UBERON:0002616!8.29e-08!59;UBERON:0003080!8.49e-08!42;UBERON:0005409!1.06e-07!35;UBERON:0000062!1.18e-07!511;UBERON:0001049!1.31e-07!57;UBERON:0005068!1.31e-07!57;UBERON:0006241!1.31e-07!57;UBERON:0007135!1.31e-07!57;UBERON:0003075!1.92e-07!86;UBERON:0007284!1.92e-07!86;UBERON:0002780!2.72e-07!41;UBERON:0001890!2.72e-07!41;UBERON:0006240!2.72e-07!41;UBERON:0000922!4.75e-07!612;UBERON:0000475!5.11e-07!365 | ||
|ontology_enrichment_uberon_v019=UBERON:0005409;1.89e-20;22!UBERON:0000160;5.96e-16;17!UBERON:0004921;1.75e-15;33!UBERON:0002294;5.91e-11;7!UBERON:0001173;5.91e-11;7!UBERON:0002108;8.89e-11;4!UBERON:0000059;6.94e-10;11!UBERON:0002110;1.24e-09;3!UBERON:0001905;7.00e-08;2!UBERON:0002757;7.00e-08;2!UBERON:0010134;7.00e-08;2!UBERON:0005408;7.00e-08;2!UBERON:0001899;7.00e-08;2!UBERON:0003296;7.88e-08;4!UBERON:0010133;7.88e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,5.83e-18,25;UBERON:0000160,3.74e-16,17;UBERON:0001007,4.47e-13,145;UBERON:0001555,4.47e-13,145;UBERON:0007026,4.47e-13,145;UBERON:0004921,9.06e-12,118;UBERON:0004119,4.04e-11,160;UBERON:0000925,4.04e-11,160;UBERON:0006595,4.04e-11,160;UBERON:0002108,9.51e-11,4;UBERON:0000059,4.21e-10,11;UBERON:0002110,7.33e-10,3;UBERON:0006242,7.33e-10,3;UBERON:0002294,1.67e-08,9;UBERON:0001173,1.67e-08,9;UBERON:0004912,1.67e-08,9;UBERON:0001905,6.91e-08,2;UBERON:0002757,6.91e-08,2;UBERON:0010134,6.91e-08,2;UBERON:0005408,6.91e-08,2;UBERON:0001899,6.91e-08,2;UBERON:0003296,8.76e-08,4;UBERON:0010133,8.76e-08,4 | |||
|phase1_expression=0,0.428201047781966,0,0,0,0.872338524100369,0,0,0,0,0.697801167972428,0.218441372130172,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,1.0843174571537,0,0.434539556882471,2.3858578411533,1.94653948121054,0.756278537312543,0.221729397462564,0.175669571386252,0.392937226493138,0,0.370784442784429,0,0,0,0.238490624305342,0,1.85728750664782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0.132529768321485,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0.220587945464788,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.658501712451753,0,0,0.0925884451585296,0,0,0,0.34779121492523,0.352226082707465,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0.347534457872331,0,0,0,0,0,0,0,0,0,0,0,0.384417447767103,0,0,0,0,0,0.0821271560138091,0,0,0,0,0.368323955743585,0,0,0,0.451199612907412,0.539107359730903,0,0,0.211103257785751,0,0,0,0,0,0,0.764628819135115,2.49322802678617,0,0,0,0.769350375349168,0,1.62689197332152,0.206082023295445,0,0.082509499920588,0,0,0,0.386682873168488,0.308097234229289,0,0.137836572484531,0,0.145016693914229,0,0,0.495854746082934,0.384380134730212,0.255225424989168,0.6069466851333,0,0,0,0.308033580176089,0,0,0,0,0,0.949138274156178,0,0,0,0,0,0,0,0,0,0,0,0,0.487426979262569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0.211107635297664,1.31717957183961,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30998378285754,0.586032717087576,0,0,0,0,0,0,0.994147647766298,0.281338832821026,0.445234820091624,0,0,3.38721580026819,1.93398740871803,0,0.102268682502155,0,0,2.3365771298305,0.358042349351218,0,1.28236427328014,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0.910347586283997,0.762760950878299,0.236387681767936,0,0,0,0,0.482385754501632,0,0,0,0,0,0.278847488557207,0.615602068030377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05499032264014,1.14262965711403,0,0,2.98578579323551,3.98059040265026,4.888241159469,0,0,0,0.202203398942031,0,0.702793337176017,0,0.391329237864179,9.46843480182962,0.789168805698781,1.20990716048664,0,0,1.05226393590145,0.103688191397247,0,0,0,0,0.284609546029793,0,0,0.391969589657511,0.69647365264322,1.39781334593624,0,0.19351266257817,0.0730893170861856,0.164230914106418,2.90967049465258,0,2.25980740780532,0.274083849293502,0,0.189932387867636,1.75996244461323,1.60317640503067,4.0556069000477,0.599428828746391,1.44090417154106,0.572682980829578,0,0,0.124252535565433,0.707082103850386,0,0,0,0,0,0,0,0,0,0,0.916641696046735,0,0,0.429226048136571,0.223171457441873,0,0,0,0,0,0,2.16540459332447,0,0,0.408610218334727,0,0.137539436597234,0,0,0,0.121499113316049,0,1.18208560948797,0.944182586429966,1.37280437475228,0.537862017998534,1.15149118391667,0.714695326373367,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.258565912723101,0.13223260174269,1.19760786519031,2.81926008926669,0.961086713109252,2.51526888159466,0.414239055347196,0,0,0,0.638341257770182,0.544017803369474,1.5041393641362,0,1.63936315354902,0.471162288750703,0,1.09823638411767,0.751145584238999,0.573409195690071,0.554645257684261,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0.754703705257725,2.66943366478961,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0.380805212168795,0,0,0.214821114084977,0,0,0,0,0,0,0,0.643324774124777,0,0,0,0.244736704506468,0,0,0,0,0,0.506827321959218,0,0,0,0.829550616910385,0,0,0,0.655219697692825,1.72041036127604,0.211312123358627,0,0,0,0,0.184105950251841,0.139879507719444,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0.642292250964595,0,0.319267718114302,0.615349092722265,0,0.345786262321089,0.322951291263702,0,0,0,0,0.462102664601353,0,0,0,0.526472298444801,0,0,0,0.163771917510097,5.32281910381363,0.135075169236789,0,0.826747186004736,0.317079050969534,0,0.548257766857182,6.45074531906083,0,0.766574565837572,4.82131652290458,12.7787814443153,1.21393120847326,0.682986574053893,0.177404740325278,0.115233987555779,0.342976018874837,0.0679697329768317,0.460409414939944,0.590969204419841,4.56048747757483,0.78493092850514,0,2.5224494698241,5.47895232305697,0.215927591218621,0,2.43020250200632,0,0,0,0,0.207216164163037,0,0.691259661814092,1.29068207646083,0,0,1.27016115057279,2.52017555398455,0,0,2.46081949955143,3.14080747568778,0.365753774946808,0,0,3.4794432940146,9.71421986118279,0.233939463462106,0.397901550322736,0,0.5647304101948,0,0.150962843566674,3.55001127296545,2.40415516554353,0,2.696631539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|phase1_expression=0,0.428201047781966,0,0,0,0.872338524100369,0,0,0,0,0.697801167972428,0.218441372130172,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,1.0843174571537,0,0.434539556882471,2.3858578411533,1.94653948121054,0.756278537312543,0.221729397462564,0.175669571386252,0.392937226493138,0,0.370784442784429,0,0,0,0.238490624305342,0,1.85728750664782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0.132529768321485,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0.220587945464788,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.658501712451753,0,0,0.0925884451585296,0,0,0,0.34779121492523,0.352226082707465,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0.347534457872331,0,0,0,0,0,0,0,0,0,0,0,0.384417447767103,0,0,0,0,0,0.0821271560138091,0,0,0,0,0.368323955743585,0,0,0,0.451199612907412,0.539107359730903,0,0,0.211103257785751,0,0,0,0,0,0,0.764628819135115,2.49322802678617,0,0,0,0.769350375349168,0,1.62689197332152,0.206082023295445,0,0.082509499920588,0,0,0,0.386682873168488,0.308097234229289,0,0.137836572484531,0,0.145016693914229,0,0,0.495854746082934,0.384380134730212,0.255225424989168,0.6069466851333,0,0,0,0.308033580176089,0,0,0,0,0,0.949138274156178,0,0,0,0,0,0,0,0,0,0,0,0,0.487426979262569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0.211107635297664,1.31717957183961,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30998378285754,0.586032717087576,0,0,0,0,0,0,0.994147647766298,0.281338832821026,0.445234820091624,0,0,3.38721580026819,1.93398740871803,0,0.102268682502155,0,0,2.3365771298305,0.358042349351218,0,1.28236427328014,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0.910347586283997,0.762760950878299,0.236387681767936,0,0,0,0,0.482385754501632,0,0,0,0,0,0.278847488557207,0.615602068030377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05499032264014,1.14262965711403,0,0,2.98578579323551,3.98059040265026,4.888241159469,0,0,0,0.202203398942031,0,0.702793337176017,0,0.391329237864179,9.46843480182962,0.789168805698781,1.20990716048664,0,0,1.05226393590145,0.103688191397247,0,0,0,0,0.284609546029793,0,0,0.391969589657511,0.69647365264322,1.39781334593624,0,0.19351266257817,0.0730893170861856,0.164230914106418,2.90967049465258,0,2.25980740780532,0.274083849293502,0,0.189932387867636,1.75996244461323,1.60317640503067,4.0556069000477,0.599428828746391,1.44090417154106,0.572682980829578,0,0,0.124252535565433,0.707082103850386,0,0,0,0,0,0,0,0,0,0,0.916641696046735,0,0,0.429226048136571,0.223171457441873,0,0,0,0,0,0,2.16540459332447,0,0,0.408610218334727,0,0.137539436597234,0,0,0,0.121499113316049,0,1.18208560948797,0.944182586429966,1.37280437475228,0.537862017998534,1.15149118391667,0.714695326373367,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.258565912723101,0.13223260174269,1.19760786519031,2.81926008926669,0.961086713109252,2.51526888159466,0.414239055347196,0,0,0,0.638341257770182,0.544017803369474,1.5041393641362,0,1.63936315354902,0.471162288750703,0,1.09823638411767,0.751145584238999,0.573409195690071,0.554645257684261,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0.754703705257725,2.66943366478961,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0.380805212168795,0,0,0.214821114084977,0,0,0,0,0,0,0,0.643324774124777,0,0,0,0.244736704506468,0,0,0,0,0,0.506827321959218,0,0,0,0.829550616910385,0,0,0,0.655219697692825,1.72041036127604,0.211312123358627,0,0,0,0,0.184105950251841,0.139879507719444,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0.642292250964595,0,0.319267718114302,0.615349092722265,0,0.345786262321089,0.322951291263702,0,0,0,0,0.462102664601353,0,0,0,0.526472298444801,0,0,0,0.163771917510097,5.32281910381363,0.135075169236789,0,0.826747186004736,0.317079050969534,0,0.548257766857182,6.45074531906083,0,0.766574565837572,4.82131652290458,12.7787814443153,1.21393120847326,0.682986574053893,0.177404740325278,0.115233987555779,0.342976018874837,0.0679697329768317,0.460409414939944,0.590969204419841,4.56048747757483,0.78493092850514,0,2.5224494698241,5.47895232305697,0.215927591218621,0,2.43020250200632,0,0,0,0,0.207216164163037,0,0.691259661814092,1.29068207646083,0,0,1.27016115057279,2.52017555398455,0,0,2.46081949955143,3.14080747568778,0.365753774946808,0,0,3.4794432940146,9.71421986118279,0.233939463462106,0.397901550322736,0,0.5647304101948,0,0.150962843566674,3.55001127296545,2.40415516554353,0,2.696631539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| ||
|short_description=p1@BTC | |short_description=p1@BTC | ||
}} | }} |
Latest revision as of 16:03, 18 September 2015
Short description: | p1@BTC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BTC_5end |
Coexpression cluster: | NA |
Association with transcript: | 142bp_to_NM_001729, uc003hig.2_5end |
EntrezGene: | BTC |
HGNC: | 1121 |
UniProt: | P35070 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
seromucus secreting cell | 4.88e-07 | 2 |
epithelial cell of gall bladder | 7.90e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 5.83e-18 | 25 |
intestine | 3.74e-16 | 17 |
digestive system | 4.47e-13 | 145 |
digestive tract | 4.47e-13 | 145 |
primitive gut | 4.47e-13 | 145 |
subdivision of digestive tract | 9.06e-12 | 118 |
endoderm-derived structure | 4.04e-11 | 160 |
endoderm | 4.04e-11 | 160 |
presumptive endoderm | 4.04e-11 | 160 |
small intestine | 9.51e-11 | 4 |
large intestine | 4.21e-10 | 11 |
gallbladder | 7.33e-10 | 3 |
gall bladder primordium | 7.33e-10 | 3 |
biliary system | 1.67e-08 | 9 |
biliary tree | 1.67e-08 | 9 |
biliary bud | 1.67e-08 | 9 |
pineal body | 6.91e-08 | 2 |
regional part of epithalamus | 6.91e-08 | 2 |
secretory circumventricular organ | 6.91e-08 | 2 |
circumventricular organ | 6.91e-08 | 2 |
epithalamus | 6.91e-08 | 2 |
gland of diencephalon | 8.76e-08 | 4 |
neuroendocrine gland | 8.76e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 4.79e-10 | 25 |
carcinoma | 3.55e-07 | 106 |