FFCP PHASE1:Hg19::chr4:47033607..47033625,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2560 | |EntrezGene=2560 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4081 | |HGNC=4081 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=9bp_to_ENST00000381582_5end | |association_with_transcript=9bp_to_ENST00000381582_5end | ||
|cluster_id=chr4:47033607..47033625,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_GABRB1_5end | |description=CAGE_peak_2_at_GABRB1_5end | ||
|id=chr4:47033607..47033625,+ | |id=chr4:47033607..47033625,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.17e-23;82!UBERON:0006215;2.07e-10;3!UBERON:0006241;2.65e-09;3!UBERON:0003057;2.65e-09;3!UBERON:0010122;5.95e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.28e-63!57;UBERON:0005068!6.28e-63!57;UBERON:0006241!6.28e-63!57;UBERON:0007135!6.28e-63!57;UBERON:0005743!1.63e-57!86;UBERON:0001017!4.11e-57!82;UBERON:0000073!7.40e-54!94;UBERON:0001016!7.40e-54!94;UBERON:0003075!2.18e-53!86;UBERON:0007284!2.18e-53!86;UBERON:0002616!2.08e-52!59;UBERON:0002346!4.36e-52!90;UBERON:0000955!5.55e-52!69;UBERON:0006238!5.55e-52!69;UBERON:0002780!3.11e-51!41;UBERON:0001890!3.11e-51!41;UBERON:0006240!3.11e-51!41;UBERON:0003080!1.04e-49!42;UBERON:0007023!5.04e-47!115;UBERON:0001893!7.27e-42!34;UBERON:0002020!7.69e-42!34;UBERON:0003528!7.69e-42!34;UBERON:0003056!4.38e-41!61;UBERON:0002791!2.44e-40!33;UBERON:0001869!3.47e-39!32;UBERON:0000033!1.15e-37!123;UBERON:0000153!5.79e-35!129;UBERON:0007811!5.79e-35!129;UBERON:0004121!1.47e-34!169;UBERON:0000924!1.98e-34!173;UBERON:0006601!1.98e-34!173;UBERON:0002619!2.38e-33!22;UBERON:0001950!4.45e-30!20;UBERON:0000956!1.47e-28!25;UBERON:0000203!1.47e-28!25;UBERON:0000025!7.33e-16!194;UBERON:0002420!2.86e-15!9;UBERON:0007245!2.86e-15!9;UBERON:0010009!2.86e-15!9;UBERON:0010011!2.86e-15!9;UBERON:0000454!2.86e-15!9;UBERON:0002308!8.39e-15!9;UBERON:0000125!8.39e-15!9;UBERON:0003076!6.28e-14!15;UBERON:0003057!6.28e-14!15;UBERON:0004111!7.53e-13!241;UBERON:0009663!4.88e-12!7;UBERON:0000477!1.42e-11!286;UBERON:0000064!5.39e-11!219;UBERON:0000200!6.44e-11!6;UBERON:0001871!1.01e-10!7;UBERON:0001894!1.35e-10!7;UBERON:0006222!1.35e-10!7;UBERON:0000483!1.40e-10!309;UBERON:0000119!2.75e-10!312;UBERON:0004733!3.18e-10!12;UBERON:0002028!3.18e-10!12;UBERON:0007277!3.18e-10!12;UBERON:0000062!8.90e-10!511;UBERON:0000349!1.02e-09!5;UBERON:0002298!1.17e-09!8;UBERON:0000481!1.98e-09!347;UBERON:0004732!2.93e-09!13;UBERON:0002021!4.70e-09!5;UBERON:0001872!5.52e-09!5;UBERON:0000475!7.51e-09!365;UBERON:0000369!4.62e-08!4;UBERON:0002435!4.62e-08!4;UBERON:0000204!4.62e-08!4;UBERON:0010082!4.62e-08!4 | |ontology_enrichment_uberon=UBERON:0001049!6.28e-63!57;UBERON:0005068!6.28e-63!57;UBERON:0006241!6.28e-63!57;UBERON:0007135!6.28e-63!57;UBERON:0005743!1.63e-57!86;UBERON:0001017!4.11e-57!82;UBERON:0000073!7.40e-54!94;UBERON:0001016!7.40e-54!94;UBERON:0003075!2.18e-53!86;UBERON:0007284!2.18e-53!86;UBERON:0002616!2.08e-52!59;UBERON:0002346!4.36e-52!90;UBERON:0000955!5.55e-52!69;UBERON:0006238!5.55e-52!69;UBERON:0002780!3.11e-51!41;UBERON:0001890!3.11e-51!41;UBERON:0006240!3.11e-51!41;UBERON:0003080!1.04e-49!42;UBERON:0007023!5.04e-47!115;UBERON:0001893!7.27e-42!34;UBERON:0002020!7.69e-42!34;UBERON:0003528!7.69e-42!34;UBERON:0003056!4.38e-41!61;UBERON:0002791!2.44e-40!33;UBERON:0001869!3.47e-39!32;UBERON:0000033!1.15e-37!123;UBERON:0000153!5.79e-35!129;UBERON:0007811!5.79e-35!129;UBERON:0004121!1.47e-34!169;UBERON:0000924!1.98e-34!173;UBERON:0006601!1.98e-34!173;UBERON:0002619!2.38e-33!22;UBERON:0001950!4.45e-30!20;UBERON:0000956!1.47e-28!25;UBERON:0000203!1.47e-28!25;UBERON:0000025!7.33e-16!194;UBERON:0002420!2.86e-15!9;UBERON:0007245!2.86e-15!9;UBERON:0010009!2.86e-15!9;UBERON:0010011!2.86e-15!9;UBERON:0000454!2.86e-15!9;UBERON:0002308!8.39e-15!9;UBERON:0000125!8.39e-15!9;UBERON:0003076!6.28e-14!15;UBERON:0003057!6.28e-14!15;UBERON:0004111!7.53e-13!241;UBERON:0009663!4.88e-12!7;UBERON:0000477!1.42e-11!286;UBERON:0000064!5.39e-11!219;UBERON:0000200!6.44e-11!6;UBERON:0001871!1.01e-10!7;UBERON:0001894!1.35e-10!7;UBERON:0006222!1.35e-10!7;UBERON:0000483!1.40e-10!309;UBERON:0000119!2.75e-10!312;UBERON:0004733!3.18e-10!12;UBERON:0002028!3.18e-10!12;UBERON:0007277!3.18e-10!12;UBERON:0000062!8.90e-10!511;UBERON:0000349!1.02e-09!5;UBERON:0002298!1.17e-09!8;UBERON:0000481!1.98e-09!347;UBERON:0004732!2.93e-09!13;UBERON:0002021!4.70e-09!5;UBERON:0001872!5.52e-09!5;UBERON:0000475!7.51e-09!365;UBERON:0000369!4.62e-08!4;UBERON:0002435!4.62e-08!4;UBERON:0000204!4.62e-08!4;UBERON:0010082!4.62e-08!4 | ||
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|short_description=p2@GABRB1 | |short_description=p2@GABRB1 | ||
}} | }} |
Latest revision as of 21:51, 17 September 2015
Short description: | p2@GABRB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GABRB1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 9bp_to_ENST00000381582_5end |
EntrezGene: | GABRB1 |
HGNC: | 4081 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data