FFCP PHASE1:Hg19::chr3:3841084..3841095,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57633 | |EntrezGene=57633 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20980 | |HGNC=20980 | ||
|TSSclassifier=strong | |||
|UniProt=Q6UXK5 | |UniProt=Q6UXK5 | ||
|association_with_transcript=-25bp_to_ENST00000319331,NM_020873,uc003bpt.3_5end | |association_with_transcript=-25bp_to_ENST00000319331,NM_020873,uc003bpt.3_5end | ||
|cluster_id=chr3:3841084..3841095,+ | |||
|description=CAGE_peak_2_at_LRRN1_5end | |description=CAGE_peak_2_at_LRRN1_5end | ||
|id=chr3:3841084..3841095,+ | |id=chr3:3841084..3841095,+ | ||
|ontology_enrichment_celltype=CL:0002319!3.70e-10!25;CL:0000047!1.95e-08!8;CL:0000133!2.82e-08!59 | |ontology_enrichment_celltype=CL:0002319!3.70e-10!25;CL:0000047!1.95e-08!8;CL:0000133!2.82e-08!59 | ||
|ontology_enrichment_celltype_v019=CL:0002319;1.23e-11;25!CL:0000540;7.35e-11;6!CL:0000404;7.35e-11;6!CL:0002322;1.94e-10;5!CL:0000075;1.19e-07;27!CL:0000147;1.37e-07;14!CL:0000064;3.55e-07;3!CL:0000067;3.55e-07;3!CL:0005012;3.55e-07;3!CL:0002304;3.55e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.34e-14,8;CL:0000133,2.09e-12,59;CL:0002319,7.64e-12,25;CL:0000540,4.30e-11,6;CL:0000031,4.30e-11,6;CL:0000404,4.30e-11,6;CL:0002322,2.49e-10,5;CL:0000221,5.18e-09,72;CL:0000075,1.25e-07,27;CL:0000147,1.51e-07,14;CL:0000064,3.72e-07,3;CL:0000067,3.72e-07,3;CL:0005012,3.72e-07,3;CL:0002304,3.72e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000031;7.35e-11;6!UBERON:0006601;1.71e-08;82!CL:0000133;3.44e-07;59 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!3.41e-49!86;UBERON:0000073!3.11e-47!94;UBERON:0001016!3.11e-47!94;UBERON:0001017!2.78e-46!82;UBERON:0001049!5.32e-40!57;UBERON:0005068!5.32e-40!57;UBERON:0006241!5.32e-40!57;UBERON:0007135!5.32e-40!57;UBERON:0003075!6.90e-40!86;UBERON:0007284!6.90e-40!86;UBERON:0002346!8.70e-37!90;UBERON:0000955!5.43e-36!69;UBERON:0006238!5.43e-36!69;UBERON:0002616!3.09e-34!59;UBERON:0004121!2.77e-33!169;UBERON:0000924!1.31e-31!173;UBERON:0006601!1.31e-31!173;UBERON:0003056!2.08e-31!61;UBERON:0002780!7.18e-30!41;UBERON:0001890!7.18e-30!41;UBERON:0006240!7.18e-30!41;UBERON:0000153!5.50e-29!129;UBERON:0007811!5.50e-29!129;UBERON:0003080!9.37e-29!42;UBERON:0007023!1.24e-28!115;UBERON:0000033!3.94e-28!123;UBERON:0002020!4.53e-26!34;UBERON:0003528!4.53e-26!34;UBERON:0001893!7.75e-26!34;UBERON:0002791!5.10e-25!33;UBERON:0001869!6.18e-25!32;UBERON:0000956!3.41e-19!25;UBERON:0000203!3.41e-19!25;UBERON:0002619!1.12e-16!22;UBERON:0001950!2.20e-15!20;UBERON:0003076!3.67e-12!15;UBERON:0003057!3.67e-12!15;UBERON:0000922!3.06e-11!612;UBERON:0004732!9.05e-11!13;UBERON:0004733!3.71e-10!12;UBERON:0002028!3.71e-10!12;UBERON:0007277!3.71e-10!12;UBERON:0000064!7.25e-10!219;UBERON:0000475!9.43e-09!365;UBERON:0000483!1.20e-08!309;UBERON:0000119!1.36e-08!312;UBERON:0007625!1.47e-08!11;UBERON:0002050!1.63e-08!605;UBERON:0005423!1.63e-08!605;UBERON:0002308!2.59e-08!9;UBERON:0000125!2.59e-08!9;UBERON:0000923!3.35e-08!604;UBERON:0005291!3.35e-08!604;UBERON:0006598!3.35e-08!604;UBERON:0002532!3.35e-08!604;UBERON:0002420!4.00e-08!9;UBERON:0007245!4.00e-08!9;UBERON:0010009!4.00e-08!9;UBERON:0010011!4.00e-08!9;UBERON:0000454!4.00e-08!9;UBERON:0002680!4.29e-08!9;UBERON:0001895!4.29e-08!9;UBERON:0010092!4.29e-08!9;UBERON:0000468!4.51e-08!659;UBERON:0000062!6.30e-08!511;UBERON:0000467!6.51e-08!625;UBERON:0000480!8.20e-08!626;UBERON:0000025!9.90e-08!194;UBERON:0009663!9.19e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.39e-39;32!UBERON:0003528;8.13e-38;34!UBERON:0002020;8.13e-38;34!UBERON:0002791;5.22e-37;32!UBERON:0001893;1.51e-35;34!UBERON:0000956;1.16e-32;25!UBERON:0000203;1.16e-32;25!UBERON:0000073;6.50e-29;53!UBERON:0002616;6.50e-29;53!UBERON:0002619;5.98e-28;22!UBERON:0002780;2.21e-27;41!UBERON:0001890;2.21e-27;41!UBERON:0001950;1.67e-25;20!UBERON:0001017;4.85e-22;75!UBERON:0000955;5.60e-22;68!UBERON:0001016;1.77e-18;83!UBERON:0004732;9.66e-17;13!UBERON:0004733;1.55e-15;12!UBERON:0002028;1.55e-15;12!UBERON:0007625;2.13e-13;11!UBERON:0000125;6.20e-12;9!UBERON:0002308;6.20e-12;9!UBERON:0002680;1.20e-11;9!UBERON:0001895;1.20e-11;9!UBERON:0000200;4.60e-10;6!UBERON:0002298;6.03e-10;6!UBERON:0002420;2.16e-09;9!UBERON:0007245;2.16e-09;9!UBERON:0010009;2.16e-09;9!UBERON:0010011;2.16e-09;9!UBERON:0000454;2.16e-09;9!UBERON:0009663;2.98e-09;7!UBERON:0001872;4.75e-09;5!UBERON:0002021;7.46e-09;5!UBERON:0002104;1.06e-08;21!UBERON:0000488;1.12e-08;4!UBERON:0000369;4.58e-08;4!UBERON:0002435;4.58e-08;4!UBERON:0000204;4.58e-08;4!UBERON:0000970;9.17e-08;20!UBERON:0002037;2.39e-07;6!UBERON:0001032;2.77e-07;24!UBERON:0004456;2.77e-07;24!UBERON:0001456;2.78e-07;21!UBERON:0001778;3.55e-07;3!UBERON:0001775;3.55e-07;3!UBERON:0000019;7.44e-07;19!UBERON:0000047;7.44e-07;19!UBERON:0004088;7.44e-07;19!UBERON:0010230;7.44e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.49e-62,81;UBERON:0001016,5.71e-59,89;UBERON:0001049,1.89e-56,56;UBERON:0005068,1.89e-56,56;UBERON:0006241,1.89e-56,56;UBERON:0007135,1.89e-56,56;UBERON:0003075,1.46e-55,82;UBERON:0007284,1.46e-55,82;UBERON:0000073,1.93e-52,53;UBERON:0002616,1.93e-52,53;UBERON:0002346,3.50e-52,86;UBERON:0000955,1.01e-45,68;UBERON:0006238,1.01e-45,68;UBERON:0001869,7.50e-44,32;UBERON:0003528,9.83e-44,34;UBERON:0002020,9.83e-44,34;UBERON:0010371,1.20e-43,104;UBERON:0003056,1.44e-42,61;UBERON:0001893,9.14e-41,34;UBERON:0002791,1.01e-40,32;UBERON:0004121,6.89e-39,171;UBERON:0000924,6.89e-39,171;UBERON:0006601,6.89e-39,171;UBERON:0002780,1.74e-37,41;UBERON:0001890,1.74e-37,41;UBERON:0003080,1.74e-37,41;UBERON:0006240,1.74e-37,41;UBERON:0000956,5.94e-33,25;UBERON:0000203,5.94e-33,25;UBERON:0010314,7.05e-31,132;UBERON:0002619,3.41e-28,22;UBERON:0001950,9.80e-26,20;UBERON:0003076,7.99e-20,15;UBERON:0003057,7.99e-20,15;UBERON:0011216,8.15e-18,223;UBERON:0004732,3.49e-17,13;UBERON:0007023,1.21e-16,114;UBERON:0004733,5.14e-16,12;UBERON:0002028,5.14e-16,12;UBERON:0007277,5.14e-16,12;UBERON:0007625,3.04e-13,11;UBERON:0002680,4.11e-12,9;UBERON:0001895,4.11e-12,9;UBERON:0010092,4.11e-12,9;UBERON:0000125,4.72e-12,9;UBERON:0002308,4.72e-12,9;UBERON:0002298,3.21e-10,6;UBERON:0000200,4.99e-10,6;UBERON:0002420,2.30e-09,9;UBERON:0007245,2.30e-09,9;UBERON:0010009,2.30e-09,9;UBERON:0010011,2.30e-09,9;UBERON:0000454,2.30e-09,9;UBERON:0009663,3.66e-09,7;UBERON:0001872,4.00e-09,5;UBERON:0002021,6.98e-09,5;UBERON:0000488,1.36e-08,4;UBERON:0000970,1.47e-08,21;UBERON:0002104,1.47e-08,21;UBERON:0000025,1.53e-08,192;UBERON:0000369,4.15e-08,4;UBERON:0002435,4.15e-08,4;UBERON:0000204,4.15e-08,4;UBERON:0010082,4.15e-08,4;UBERON:0001456,5.09e-08,22;UBERON:0000019,1.16e-07,20;UBERON:0000047,1.16e-07,20;UBERON:0010312,1.16e-07,20;UBERON:0004088,1.16e-07,20;UBERON:0010230,1.16e-07,20;UBERON:0003072,1.16e-07,20;UBERON:0004128,1.16e-07,20;UBERON:0003071,1.16e-07,20;UBERON:0002037,1.47e-07,6;UBERON:0006215,1.47e-07,6;UBERON:0000020,3.66e-07,24;UBERON:0001032,3.66e-07,24;UBERON:0004456,3.66e-07,24;UBERON:0001778,3.72e-07,3;UBERON:0001775,3.72e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0.263766978228454,0,0,0,0,0,0,1.84681587115182,0.204000691244253,2.82109249330279,2.86235987131057,2.32686522623903,3.51519390865448,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0.764546456250458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0.795285947051099,0,4.34860158954712,5.09977614163897,4.30390449896318,0.654895377488563,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.908144565869588,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0.0974370051611986,0,0,0,0,0,0,0,0,0,3.53723747775827,4.10842281796604,3.137236457477,3.21349270547648,4.79409616663694,8.39447925874409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0.590789906681404,1.32438929824395,0.245976877086227,2.23038153388083,0.329250856225877,0,0,0,0,0,1.44331342025273,3.4779121492523,4.10930429825376,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0.144119953416961,0,0.253991577168676,0,2.34434894420094,1.71072446022705,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80863626235752,0,2.39935178836937,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,3.81141936333695,3.90419561572865,1.54657762555539,2.34522771468088,1.91381625495949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802025881213139,0.0920809889358963,0,0,0,2.25599806453706,0.616122696835318,0,0,0.633309773357254,0,0,0,0,0.270946437543853,0,0.254876273045038,0,0.223874754722178,0,0,0.512900250232778,4.26419039409617,3.57916234130733,0,1.64825036673018,0.742585499285292,0,0,0,0.386682873168488,0.154048617114644,0,0.137836572484531,0,0.145016693914229,0.426133137080504,0.623224249527161,0.495854746082934,0.576570202095319,0.127612712494584,1.0115778085555,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0.443430153536676,0.459446800413919,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,2.07875276582847,0,0.994147647766298,2.67271891179974,0,0,0,0.996239941255349,0,0,0,0,0,0.988551862620595,0,0,0.0986434056369336,0,0,1.93866549219044,1.29875337426592,3.99227596002388,0,0.61221999997337,0,0.227586896570999,0.762760950878299,0,0.689486746482929,0,1.21537496453305,8.85741385813839,2.65312164975897,7.62908681585416,2.65390223834939,1.47773809476774,3.07139556015562,0,0,0.230850775511391,0.683652335082007,0.69169171316418,0.0897576444097721,0.325942115766024,0,0.549585560411174,0,0,0,0,0,0,0,0,0,0,0,0,0.865554558968364,0,0.176915129006678,0,0,0.617819694732514,0.522109747527277,0.943615861729479,1.60515529459758,2.34264445725339,0,0.19566461893209,0,0.394584402849391,0,3.67287313956588,0.063186579628488,0,0.207376382794494,0,0,0.313932918407225,0,1.13843818411917,0,0.173559738335131,0,0,0.52418000472609,0,0,0,0,0.0969890164884194,0,1.35588444468319,0,0,1.70939149080872,0.977756913674015,0.160317640503067,0,0.799238438328521,0,0,1.02956998717179,0,0.372757606696298,0,0.271808412147228,0.104602846312333,0,0,3.60252173225874,1.09524303113594,0,0.859530882839914,0,0,0.687481272035051,0,0,0,0.223171457441873,0.268733889946905,0,0,0,0,0,0.492137407573744,0,1.59045937961861,1.49823746722733,4.98334760241559,3.71356478812531,4.56984371832104,0,0,2.12623448303086,0,0.157611414598396,0.524545881349981,2.95680942254338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.84422503995411,1.85125642439766,0,0,0.106787412567695,0.943225830597996,0.414239055347196,0,0,0,0,0,0,0,0,0,1.77213635993397,1.70836770862748,2.003054891304,2.86704597845036,1.33114861844223,1.4903136705932,2.35192679391592,0.499921631848426,0,0,0,0.936669811613763,1.01444720027578,0,0,0,0,0.251567901752575,0,0,0,0,0,0.159296767163702,0,0.310525913752519,0,0,1.04349012362347,2.10360652596106,1.14241563650639,0.406870733204662,0,0.751873899297419,0,0,0,0,0,0,0,3.85994864474866,0,0,0,0,0.179088841081487,0,0,0,0.38582807654183,1.35153952522458,0.512483037175893,0,0,2.48865185073115,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,2.48830904013189,3.06946491128764,0,0.471797825567689,0.655257829152084,0,0,0,0,0,0,0,0,0,2.18379365327962,2.8339315265117,1.43670473151436,2.46139637088906,4.78936222821264,1.38314504928436,1.77623210195036,1.42769420259154,0,0,0,0,0.381382095467167,2.0710797781803,1.5913297769302,0.150420656698515,0,0.781514011233092,0,0,0.147856086217045,2.36381546164381,3.12431239445539,1.86018116851066,1.71222687523548,4.37579847214576,1.09651553371436,0,0,0,3.74991285114801,0.672567444437648,0.606965604236632,0.682986574053893,0,0,0,3.80630504670258,2.03895598044832,0,0,0.54945164995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| ||
|short_description=p2@LRRN1 | |short_description=p2@LRRN1 | ||
}} | }} |
Latest revision as of 03:17, 18 September 2015
Short description: | p2@LRRN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LRRN1_5end |
Coexpression cluster: | NA |
Association with transcript: | -25bp_to_ENST00000319331, NM_020873, uc003bpt.3_5end |
EntrezGene: | LRRN1 |
HGNC: | 20980 |
UniProt: | Q6UXK5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.34e-14 | 8 |
neurectodermal cell | 2.09e-12 | 59 |
neural cell | 7.64e-12 | 25 |
neuron | 4.30e-11 | 6 |
neuroblast | 4.30e-11 | 6 |
electrically signaling cell | 4.30e-11 | 6 |
embryonic stem cell | 2.49e-10 | 5 |
ectodermal cell | 5.18e-09 | 72 |
columnar/cuboidal epithelial cell | 1.25e-07 | 27 |
pigment cell | 1.51e-07 | 14 |
ciliated cell | 3.72e-07 | 3 |
ciliated epithelial cell | 3.72e-07 | 3 |
multi-ciliated epithelial cell | 3.72e-07 | 3 |
non-pigmented ciliary epithelial cell | 3.72e-07 | 3 |