FFCP PHASE1:Hg19::chr14:52535971..52535992,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:52535971..52535992,-
|short_description=p3@NID2
|description=CAGE_peak_3_at_NID2_5end
|association_with_transcript=-25bp_to_NM_007361,uc001wzo.2,uc001wzp....") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22795 | |EntrezGene=22795 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13389 | |HGNC=13389 | ||
|TSSclassifier=strong | |||
|UniProt=Q14112 | |UniProt=Q14112 | ||
|association_with_transcript=-25bp_to_NM_007361,uc001wzo.2,uc001wzp.2,uc010tqs.1,uc010tqt.1_5end | |||
|cluster_id=chr14:52535971..52535992,- | |||
|coexpression_cluster_id=C3430 | |||
|description=CAGE_peak_3_at_NID2_5end | |||
|id=chr14:52535971..52535992,- | |||
|ontology_enrichment_celltype=CL:0000055!3.68e-18!180;CL:0000183!4.16e-15!59;CL:0000680!4.11e-14!57;CL:0000056!4.11e-14!57;CL:0000355!4.11e-14!57;CL:0000057!8.07e-13!75;CL:0000187!1.10e-12!54;CL:0002494!1.52e-11!16;CL:0000222!7.69e-11!119;CL:0000393!8.92e-11!60;CL:0000211!8.92e-11!60;CL:0002371!2.48e-10!591;CL:0000192!4.89e-08!42;CL:0000514!4.89e-08!42;CL:0000144!1.47e-07!625;CL:0000048!3.63e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0002494;2.96e-13;16!CL:0002548;2.49e-10;6!CL:0000632;1.76e-08;3!CL:0002590;2.31e-08;3!CL:0000708;7.11e-08;3!CL:0002564;9.22e-08;3!CL:0000349;8.82e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002494,1.27e-13,16;CL:0002548,1.93e-10,6;CL:0000632,1.66e-08,3;CL:0002590,3.46e-08,3;CL:0002564,1.12e-07,3;CL:0000708,1.25e-07,3;CL:0000349,8.81e-07,19;CL:0000057,9.23e-07,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!4.98e-13!83;UBERON:0002329!4.98e-13!83;UBERON:0003077!4.98e-13!83;UBERON:0003059!4.98e-13!83;UBERON:0007282!4.98e-13!83;UBERON:0009618!4.98e-13!83;UBERON:0007285!4.98e-13!83;UBERON:0004872!1.17e-12!84;UBERON:0004535!2.35e-12!110;UBERON:0001134!2.76e-12!61;UBERON:0002036!2.76e-12!61;UBERON:0003082!2.76e-12!61;UBERON:0001009!2.81e-12!113;UBERON:0002385!4.68e-12!63;UBERON:0001015!4.68e-12!63;UBERON:0000383!4.68e-12!63;UBERON:0005256!7.34e-12!143;UBERON:0003914!1.63e-11!118;UBERON:0004290!4.09e-11!70;UBERON:0002049!1.19e-10!79;UBERON:0007798!1.19e-10!79;UBERON:0000490!1.85e-10!138;UBERON:0000119!2.22e-10!312;UBERON:0000948!5.15e-10!24;UBERON:0005498!5.15e-10!24;UBERON:0004140!5.15e-10!24;UBERON:0009881!5.15e-10!24;UBERON:0004141!5.15e-10!24;UBERON:0003084!5.15e-10!24;UBERON:0007005!5.15e-10!24;UBERON:0004139!5.15e-10!24;UBERON:0004291!5.15e-10!24;UBERON:0007100!2.17e-09!27;UBERON:0000483!2.40e-09!309;UBERON:0000481!1.88e-08!347;UBERON:0000468!2.27e-08!659;UBERON:0002100!4.08e-08!216;UBERON:0000486!4.09e-08!82;UBERON:0000475!8.20e-08!365;UBERON:0000477!9.64e-08!286;UBERON:0000055!7.42e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0005284;4.08e-13;5!UBERON:0007100;2.46e-09;25!UBERON:0000948;4.80e-09;22!UBERON:0011135;5.05e-08;5!UBERON:0002216;5.05e-08;5!UBERON:0011134;5.05e-08;5!UBERON:0002209;5.05e-08;5!UBERON:0002213;5.05e-08;5!UBERON:0007844;5.05e-08;5!UBERON:0011138;5.05e-08;5!UBERON:0001130;5.05e-08;5!UBERON:0001066;5.05e-08;5!UBERON:0001468;5.05e-08;5!UBERON:0003210;7.11e-08;3!UBERON:0006876;8.52e-08;11!UBERON:0002242;9.22e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005284,5.29e-13,5;UBERON:0007100,1.12e-08,27;UBERON:0001009,1.38e-08,112;UBERON:0003104,2.08e-08,160;UBERON:0009142,2.08e-08,160;UBERON:0000948,2.41e-08,24;UBERON:0005498,2.41e-08,24;UBERON:0004140,2.41e-08,24;UBERON:0009881,2.41e-08,24;UBERON:0004141,2.41e-08,24;UBERON:0003084,2.41e-08,24;UBERON:0007005,2.41e-08,24;UBERON:0004139,2.41e-08,24;UBERON:0004291,2.41e-08,24;UBERON:0004535,3.48e-08,109;UBERON:0003914,4.95e-08,117;UBERON:0011135,5.42e-08,5;UBERON:0002216,5.42e-08,5;UBERON:0011134,5.42e-08,5;UBERON:0002209,5.42e-08,5;UBERON:0002213,5.42e-08,5;UBERON:0005856,5.42e-08,5;UBERON:0005866,5.42e-08,5;UBERON:0005863,5.42e-08,5;UBERON:0007844,5.42e-08,5;UBERON:0011138,5.42e-08,5;UBERON:0001130,5.42e-08,5;UBERON:0001066,5.42e-08,5;UBERON:0001468,5.42e-08,5;UBERON:0006876,1.10e-07,11;UBERON:0002242,1.12e-07,3;UBERON:0003068,1.12e-07,3;UBERON:0002328,1.12e-07,3;UBERON:0004880,1.12e-07,3;UBERON:0003210,1.25e-07,3;UBERON:0000490,2.00e-07,148 | |||
|phase1_expression=1.09007027562334,1.49870366723688,0.986680828671798,1.0007329835313,0.893922188854576,0,0,0.631719873426831,1.30592814099919,0.491467873003018,0,2.83973783769224,2.11013582582763,0.990130823680373,2.65117900582333,0,0,0,0,0.246242116153576,1.22400414746552,0.626909442956176,0.286235987131057,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,0.670700859703636,1.66221330396589,0,0,0,0,0,0.189069634328136,0,0.790513071238134,0.0654895377488563,0,0,0,0,0,0,0,0,1.98762407366705,0,1.38856200643038,1.69592382577203,0.419499436209906,0,0,0.258416759169329,0,0,2.41697590265488,0,0.976248230192678,0.367663080345869,0,0,0,0.563057402416611,0,0,0.366403487860815,0,0,0,0.496971951695318,1.64619665163954,0,1.14734648299525,0,1.68203280042692,2.1349799145941,0.74000264525148,4.04574346019696,2.02066008104532,1.47115712802113,5.90293967815232,2.88087962239999,0,0.312160076830321,0,0.149448680551801,0,0,0,0.816616685019573,0.122834317311768,1.13658359293342,0,0.989067717114227,0,3.59309070908119,0,0.125118519871964,0.831192346452549,0.877955241761676,0.612975591598039,1.95309476578576,0.907457465280168,0,0.640672166455702,1.05965950579781,0.300091096084402,0.103052529238439,0.515281080091258,0.37223371266318,0,0.389748020644795,0,0.276149695926898,0.323292113637624,0.355009592516614,0.10075209822764,0.67824236924195,0,0,0,0,0,0,0,0,0,0,1.92972281457866,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,1.4763109092493,0,4.115740113314,4.41026134156626,0,0,0,0,0,1.20097467208968,0,0,0,0,1.3032332212413,0,0,0,1.87853910777315,0.866198686566443,0.462985512576611,0.380508304469197,0,0,0,0,0,0,0,0,0.0895585227028483,0,1.53353071666084,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,1.23344192779897,3.48768055066624,1.10007428731425,0.129271715757778,10.7296933755565,0.845302752556,0.26593811658487,1.04007436911366,0.771622122786426,0,1.5985330740966,8.721657613147,3.7983512377401,0,0.65147236858747,6.04166312862328,1.58390374586686,0,0,0,0,0,0,1.91699884393266,0,0,0.868687840005475,1.64381058040307,0.179060963239896,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,2.08575535922538,1.00034104211935,1.89885516589815,1.45579603071565,0.535286966391485,0.630809660135739,1.52283839490527,0,0,0,0,0.184369168541703,0.260650843404249,3.52442083432933,3.0882908142977,0,0,0,0.909382714338778,0,1.20956117331872,0.496215615637554,0,0.561320188866147,0.896974044789907,0.511707249066704,1.28683136914886,0,0.154209693802656,0.355123450626254,0.164254312027618,0.519254429183621,0,0,0,0,2.06666006696292,1.0925470080403,0.917870904715969,0,0.308061348417659,0,0,0.211103257785751,1.13733384070897,0.170093705276516,0.215915916102139,1.54227252690289,0.270946437543853,0.501689773854853,0.254876273045038,3.3243040357149,0,0,0,0,0.328014645699706,0.325378394664303,0.103041011647722,0,0,0.574265537996172,0,0,0.48335359146061,1.23238893691716,0.921022048356777,0.137836572484531,0.322260734604821,0.580066775656914,0.426133137080504,0.712256285173899,0,0,0,0,0.464845549297286,0.62962469366128,0.6970372701606,0,1.06461206063404,0,0,0.572499546967965,1.116475108079,3.16379424718726,3.8126038784765,1.02359116524534,0.855877976067841,0.636406495851874,0,0.899362287916574,2.19629623788844,1.06031162111118,1.81964233415984,0,0.421258456238981,1.46290121726877,0.243713489631284,0,0.409499734223957,2.2624869112594,0,0.551365343546124,0,0,0,0.655894752046633,0.202910376962704,0.6196469961995,0.845086807596724,0.573645408816206,2.06322986127554,0,0.354761064070598,0,0.329294892959902,0,0.699869440489966,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0.95497793895076,0.296964680832639,1.22864280839693,0,0,1.00177834520615,0,0,0.19924798825107,0.552567831062295,0,0,0,0.311039587661807,0,0,0,0.493217028184668,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.581934098930517,0,0.225980740780532,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0.203996435272644,0,0,0,0,0,0,0.279282401272254,0.687481272035051,0,0,1.28767814440971,0,0.53746777989381,1.44119953416961,0,0,0,0,0,0.0846733320657845,0,0,0,0.137539436597234,0,0,0,0,0,0.236417121897595,0.524545881349981,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0.129282956361551,0,0,0,0,0.471612915298998,0,0,0,0,0,0.544017803369474,0.2506898940227,0.306345576763462,0,0,0,0,0,0,0.110929051536852,0.124192805882767,0,0,0,0,0.235265819698172,0,0,0.74627401443437,0.701139929541673,0,0.378806010550178,0.50313580350515,1.77962244319307,1.83072054717539,0.604923695052956,0.621748802331122,1.18284119991707,0.3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| ||
|short_description=p3@NID2 | |||
}} | }} |
Latest revision as of 06:17, 20 September 2015
Short description: | p3@NID2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NID2_5end |
Coexpression cluster: | C3430_Mesenchymal_Fibroblast_Pericytes_Cardiac_Nucleus_Meningeal_Placental |
Association with transcript: | -25bp_to_NM_007361, uc001wzo.2, uc001wzp.2, uc010tqs.1, uc010tqt.1_5end |
EntrezGene: | NID2 |
HGNC: | 13389 |
UniProt: | Q14112 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 1.27e-13 | 16 |
cardiac fibroblast | 1.93e-10 | 6 |
hepatic stellate cell | 1.66e-08 | 3 |
smooth muscle cell of the brain vasculature | 3.46e-08 | 3 |
nucleus pulposus cell of intervertebral disc | 1.12e-07 | 3 |
leptomeningeal cell | 1.25e-07 | 3 |
extraembryonic cell | 8.81e-07 | 19 |
fibroblast | 9.23e-07 | 76 |