FFCP PHASE1:Hg19::chr7:47579188..47579231,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64759 | |EntrezGene=64759 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21616 | |HGNC=21616 | ||
|TSSclassifier=strong | |||
|UniProt=E7ERH3,Q68CZ2,F5GXX8 | |UniProt=E7ERH3,Q68CZ2,F5GXX8 | ||
|association_with_transcript=0bp_to_ENST00000355730,ENST00000398879,ENST00000442536,ENST00000458317,ENST00000545849,uc003tnv.2,uc010kyo.1_5end | |association_with_transcript=0bp_to_ENST00000355730,ENST00000398879,ENST00000442536,ENST00000458317,ENST00000545849,uc003tnv.2,uc010kyo.1_5end | ||
|cluster_id=chr7:47579188..47579231,- | |||
|coexpression_cluster_id=C356 | |||
|description=CAGE_peak_13_at_TNS3_5end | |description=CAGE_peak_13_at_TNS3_5end | ||
|id=chr7:47579188..47579231,- | |id=chr7:47579188..47579231,- | ||
|ontology_enrichment_celltype=CL:1000497!2.04e-14!18;CL:0002518!2.04e-14!18;CL:1000507!5.54e-13!12;CL:1000494!5.54e-13!12;CL:1000449!4.13e-11!16;CL:0000181!1.94e-07!12;CL:0000417!1.94e-07!12;CL:0000668!1.94e-07!12;CL:0000414!1.94e-07!12;CL:0000412!1.94e-07!12;CL:0000182!1.94e-07!12;CL:0000066!3.07e-07!254;CL:0002681!8.05e-07!13;CL:0002584!8.05e-07!13 | |ontology_enrichment_celltype=CL:1000497!2.04e-14!18;CL:0002518!2.04e-14!18;CL:1000507!5.54e-13!12;CL:1000494!5.54e-13!12;CL:1000449!4.13e-11!16;CL:0000181!1.94e-07!12;CL:0000417!1.94e-07!12;CL:0000668!1.94e-07!12;CL:0000414!1.94e-07!12;CL:0000412!1.94e-07!12;CL:0000182!1.94e-07!12;CL:0000066!3.07e-07!254;CL:0002681!8.05e-07!13;CL:0002584!8.05e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:1000507;8.08e-42;10!CL:1000494;8.08e-42;10!CL:1000497;1.30e-36;17!CL:0002518;1.30e-36;17!CL:1000449;2.11e-27;15!CL:0002681;1.70e-15;12!CL:0002584;1.70e-15;12!CL:0000650;5.84e-12;2!CL:1000500;5.84e-12;2!CL:1000618;5.84e-12;2!CL:1001318;5.84e-12;2!CL:0002173;5.84e-12;2!CL:0000239;4.89e-08;3!CL:1000615;4.89e-08;3!CL:0002306;4.89e-08;3!CL:0000182;1.05e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,7.01e-42,10;CL:1000494,7.01e-42,10;CL:1000497,1.18e-36,17;CL:0002518,1.18e-36,17;CL:1000449,1.93e-27,15;CL:0002681,1.53e-15,12;CL:0002584,1.53e-15,12;CL:0000650,5.84e-12,2;CL:1000500,5.84e-12,2;CL:1000618,5.84e-12,2;CL:1001318,5.84e-12,2;CL:0002173,5.84e-12,2;CL:0000239,4.39e-08,3;CL:1000615,4.39e-08,3;CL:0002306,4.39e-08,3;CL:0000182,1.19e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0003104;2.82e-16;31!UBERON:0004161;1.71e-12;11!UBERON:0009497;1.56e-10;13!UBERON:0003918;1.63e-09;10!UBERON:0007687;1.63e-09;10 | |||
|ontology_enrichment_disease=DOID:2394!5.44e-08!14;DOID:193!3.63e-07!29 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!6.73e-21!55;UBERON:0005173!6.73e-21!55;UBERON:0002417!5.36e-18!61;UBERON:0000916!5.36e-18!61;UBERON:0002113!8.02e-16!27;UBERON:0003918!8.02e-16!27;UBERON:0005095!8.02e-16!27;UBERON:0007687!8.02e-16!27;UBERON:0007625!1.43e-14!11;UBERON:0000489!3.80e-14!32;UBERON:0009773!5.54e-13!12;UBERON:0001231!5.54e-13!12;UBERON:0004810!5.54e-13!12;UBERON:0005177!1.62e-11!107;UBERON:0004211!4.13e-11!16;UBERON:0001285!4.13e-11!16;UBERON:0007684!4.13e-11!16;UBERON:0003220!4.13e-11!16;UBERON:0004208!4.13e-11!16;UBERON:0006555!2.60e-10!17;UBERON:0005103!2.60e-10!17;UBERON:0000083!2.60e-10!17;UBERON:0009201!2.60e-10!17;UBERON:0004819!2.60e-10!17;UBERON:0006553!2.60e-10!17;UBERON:0003074!2.60e-10!17;UBERON:0003060!2.60e-10!17;UBERON:0006554!3.13e-10!44;UBERON:0001008!6.80e-10!45;UBERON:0000080!1.33e-09!18;UBERON:0002120!1.33e-09!18;UBERON:0004875!1.33e-09!18;UBERON:0005721!1.33e-09!18;UBERON:0005754!1.33e-09!18;UBERON:0007297!1.33e-09!18;UBERON:0009569!7.32e-09!113;UBERON:0007499!1.35e-08!25;UBERON:0002107!1.39e-08!19;UBERON:0006925!1.39e-08!19;UBERON:0008836!1.39e-08!19;UBERON:0004876!2.11e-08!20;UBERON:0000466!2.32e-08!126;UBERON:0001851!2.73e-08!16;UBERON:0009856!3.74e-08!26;UBERON:0003887!6.87e-08!21;UBERON:0000019!1.60e-07!19;UBERON:0000047!1.60e-07!19;UBERON:0004088!1.60e-07!19;UBERON:0003072!1.60e-07!19;UBERON:0003071!1.60e-07!19;UBERON:0004128!1.60e-07!19;UBERON:0000488!2.03e-07!4;UBERON:0003886!3.10e-07!63;UBERON:0000058!3.75e-07!26;UBERON:0000020!4.20e-07!23;UBERON:0008835!4.20e-07!22;UBERON:0003894!4.20e-07!22;UBERON:0000970!4.81e-07!20;UBERON:0002118!5.16e-07!5;UBERON:0004532!5.16e-07!5;UBERON:0003064!5.75e-07!37;UBERON:0001225!8.05e-07!13;UBERON:0008987!8.05e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;8.08e-42;10!UBERON:0009773;8.08e-42;10!UBERON:0001231;8.08e-42;10!UBERON:0004810;8.08e-42;10!UBERON:0002113;5.96e-36;24!UBERON:0011143;5.96e-36;24!UBERON:0000489;2.73e-29;29!UBERON:0006554;3.18e-28;30!UBERON:0001008;3.18e-28;30!UBERON:0006555;2.11e-27;15!UBERON:0004819;2.11e-27;15!UBERON:0001285;2.11e-27;15!UBERON:0007684;2.11e-27;15!UBERON:0005172;7.22e-20;52!UBERON:0005173;7.22e-20;52!UBERON:0001225;1.70e-15;12!UBERON:0008987;1.70e-15;12!UBERON:0002417;2.85e-15;58!UBERON:0000916;2.85e-15;58!UBERON:0001851;2.73e-12;15!UBERON:0000353;2.73e-12;15!UBERON:0003567;5.84e-12;2!UBERON:0003838;5.84e-12;2!UBERON:0003586;5.84e-12;2!UBERON:0005169;5.84e-12;2!UBERON:0002321;5.84e-12;2!UBERON:0005215;5.84e-12;2!UBERON:0002303;5.84e-12;2!UBERON:0002319;5.84e-12;2!UBERON:0006853;4.89e-08;3!UBERON:0007685;4.89e-08;3!UBERON:0004134;4.89e-08;3!UBERON:0005177;1.28e-07;99!UBERON:0002107;4.05e-07;19!UBERON:0006925;4.05e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,7.01e-42,10;UBERON:0002113,5.17e-33,26;UBERON:0003918,5.17e-33,26;UBERON:0011143,5.17e-33,26;UBERON:0005095,5.17e-33,26;UBERON:0007687,5.17e-33,26;UBERON:0005172,5.78e-29,54;UBERON:0005173,5.78e-29,54;UBERON:0004211,1.93e-27,15;UBERON:0009773,1.93e-27,15;UBERON:0001231,1.93e-27,15;UBERON:0001285,1.93e-27,15;UBERON:0007684,1.93e-27,15;UBERON:0004208,1.93e-27,15;UBERON:0000489,2.97e-27,31;UBERON:0002417,1.14e-25,60;UBERON:0000916,1.14e-25,60;UBERON:0006555,1.23e-25,16;UBERON:0004819,1.23e-25,16;UBERON:0006554,4.64e-17,47;UBERON:0001008,1.20e-16,48;UBERON:0001225,1.53e-15,12;UBERON:0008987,1.53e-15,12;UBERON:0005177,2.20e-15,101;UBERON:0001851,2.51e-12,15;UBERON:0000353,2.51e-12,15;UBERON:0003567,5.84e-12,2;UBERON:0003838,5.84e-12,2;UBERON:0003586,5.84e-12,2;UBERON:0005169,5.84e-12,2;UBERON:0002321,5.84e-12,2;UBERON:0005215,5.84e-12,2;UBERON:0002303,5.84e-12,2;UBERON:0002319,5.84e-12,2;UBERON:0009569,6.24e-12,112;UBERON:0003103,5.67e-11,68;UBERON:0003104,3.29e-08,160;UBERON:0009142,3.29e-08,160;UBERON:0006853,4.39e-08,3;UBERON:0007685,4.39e-08,3;UBERON:0004134,4.39e-08,3;UBERON:0002107,4.78e-07,19;UBERON:0006925,4.78e-07,19;UBERON:0008836,4.78e-07,19 | |||
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| ||
|short_description=p13@TNS3 | |short_description=p13@TNS3 | ||
}} | }} |
Latest revision as of 21:14, 18 September 2015
Short description: | p13@TNS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_TNS3_5end |
Coexpression cluster: | C356_renal_Smooth_Chondrocyte_thyroid_serous_Small_mesenchymal |
Association with transcript: | 0bp_to_ENST00000355730, ENST00000398879, ENST00000442536, ENST00000458317, ENST00000545849, uc003tnv.2, uc010kyo.1_5end |
EntrezGene: | TNS3 |
HGNC: | 21616 |
UniProt: | E7ERH3Q68CZ2F5GXX8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 7.01e-42 | 10 |
nephron tubule epithelial cell | 7.01e-42 | 10 |
kidney cell | 1.18e-36 | 17 |
kidney epithelial cell | 1.18e-36 | 17 |
epithelial cell of nephron | 1.93e-27 | 15 |
kidney cortical cell | 1.53e-15 | 12 |
renal cortical epithelial cell | 1.53e-15 | 12 |
mesangial cell | 5.84e-12 | 2 |
kidney interstitial cell | 5.84e-12 | 2 |
juxtaglomerular complex cell | 5.84e-12 | 2 |
renal interstitial pericyte | 5.84e-12 | 2 |
extraglomerular mesangial cell | 5.84e-12 | 2 |
brush border epithelial cell | 4.39e-08 | 3 |
kidney cortex tubule cell | 4.39e-08 | 3 |
epithelial cell of proximal tubule | 4.39e-08 | 3 |
hepatocyte | 1.19e-07 | 12 |