FFCP PHASE1:Hg19::chr22:46022320..46022366,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr22:46022320..46022366,- | |||
|coexpression_cluster_id=C3016 | |||
|description=CAGE_peak_at_chr22:46022320..46022366,- | |description=CAGE_peak_at_chr22:46022320..46022366,- | ||
|id=chr22:46022320..46022366,- | |id=chr22:46022320..46022366,- | ||
|ontology_enrichment_celltype=CL:0000066!3.00e-46!254;CL:0002076!2.61e-19!43;CL:0000223!2.15e-15!59;CL:0000076!9.04e-11!62;CL:0002368!2.36e-10!13;CL:0000082!2.59e-08!19;CL:1000497!2.23e-07!18;CL:0002518!2.23e-07!18;CL:0002251!2.90e-07!21;CL:1000449!6.62e-07!16 | |ontology_enrichment_celltype=CL:0000066!3.00e-46!254;CL:0002076!2.61e-19!43;CL:0000223!2.15e-15!59;CL:0000076!9.04e-11!62;CL:0002368!2.36e-10!13;CL:0000082!2.59e-08!19;CL:1000497!2.23e-07!18;CL:0002518!2.23e-07!18;CL:0002251!2.90e-07!21;CL:1000449!6.62e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0002076;5.15e-09;42!CL:1000507;8.36e-09;10!CL:1000494;8.36e-09;10!CL:1000497;1.47e-08;17!CL:0002518;1.47e-08;17!CL:0000239;2.06e-08;3!CL:1000615;2.06e-08;3!CL:0002306;2.06e-08;3!CL:1000449;1.74e-07;15!CL:0002251;1.80e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.59e-33,253;CL:0002076,1.19e-10,42;CL:0000223,2.22e-10,58;CL:1000507,8.89e-09,10;CL:1000494,8.89e-09,10;CL:1000497,1.54e-08,17;CL:0002518,1.54e-08,17;CL:0000239,2.45e-08,3;CL:1000615,2.45e-08,3;CL:0002306,2.45e-08,3;CL:1000449,1.85e-07,15;CL:0002251,1.93e-07,20 | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.24e-07;29!UBERON:0006595;5.37e-07;86 | |||
|ontology_enrichment_disease=DOID:305!7.06e-45!106;DOID:0050687!1.33e-30!143;DOID:162!1.44e-21!235;DOID:14566!1.34e-20!239;DOID:1749!7.83e-18!14;DOID:299!4.03e-13!25 | |||
|ontology_enrichment_disease_v019=DOID:1749;4.70e-32;14!DOID:299;1.37e-13;25!DOID:305;1.07e-11;106!DOID:4929;2.88e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.23e-48,106;DOID:0050687,2.20e-32,143;DOID:1749,6.61e-32,14;DOID:162,1.17e-18,235;DOID:14566,5.38e-18,239;DOID:299,1.40e-13,25;DOID:4929,2.89e-07,2;DOID:3493,9.36e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000065!8.59e-23!53;UBERON:0004119!2.55e-22!169;UBERON:0000925!2.55e-22!169;UBERON:0006595!2.55e-22!169;UBERON:0001004!4.43e-21!72;UBERON:0008947!2.84e-20!38;UBERON:0003258!2.84e-20!38;UBERON:0001007!1.02e-19!155;UBERON:0001555!1.02e-19!155;UBERON:0007026!1.02e-19!155;UBERON:0000072!8.73e-17!46;UBERON:0000077!1.66e-16!130;UBERON:0004921!2.29e-15!129;UBERON:0004185!2.29e-15!129;UBERON:0000464!1.80e-14!104;UBERON:0005153!1.80e-13!37;UBERON:0005177!2.76e-13!107;UBERON:0000466!5.22e-13!126;UBERON:0001041!9.14e-13!98;UBERON:0001008!2.10e-12!45;UBERON:0005911!2.74e-12!82;UBERON:0000058!4.72e-12!26;UBERON:0006554!1.72e-11!44;UBERON:0003104!3.64e-11!238;UBERON:0009142!3.64e-11!238;UBERON:0003064!3.92e-11!37;UBERON:0001737!6.89e-11!9;UBERON:0002048!1.23e-10!22;UBERON:0000117!1.23e-10!22;UBERON:0000171!1.23e-10!22;UBERON:0000170!1.23e-10!22;UBERON:0005597!1.23e-10!22;UBERON:0000118!1.23e-10!22;UBERON:0005178!1.38e-10!34;UBERON:0002224!1.38e-10!34;UBERON:0005181!4.00e-10!35;UBERON:0005157!8.77e-10!51;UBERON:0000489!1.62e-09!32;UBERON:0002113!3.79e-09!27;UBERON:0003918!3.79e-09!27;UBERON:0005095!3.79e-09!27;UBERON:0007687!3.79e-09!27;UBERON:0001557!5.20e-09!19;UBERON:0009569!1.07e-08!113;UBERON:0000080!1.45e-08!18;UBERON:0002120!1.45e-08!18;UBERON:0004875!1.45e-08!18;UBERON:0005721!1.45e-08!18;UBERON:0005754!1.45e-08!18;UBERON:0007297!1.45e-08!18;UBERON:0002294!2.09e-08!7;UBERON:0001173!2.09e-08!7;UBERON:0004912!2.09e-08!7;UBERON:0000344!2.14e-08!12;UBERON:0004802!2.59e-08!19;UBERON:0000115!2.59e-08!19;UBERON:0005156!3.01e-08!59;UBERON:0000990!3.01e-08!59;UBERON:0001048!8.99e-08!168;UBERON:0006555!1.31e-07!17;UBERON:0005103!1.31e-07!17;UBERON:0000083!1.31e-07!17;UBERON:0009201!1.31e-07!17;UBERON:0004819!1.31e-07!17;UBERON:0006553!1.31e-07!17;UBERON:0003074!1.31e-07!17;UBERON:0003060!1.31e-07!17;UBERON:0004807!1.39e-07!28;UBERON:0004175!1.72e-07!25;UBERON:0004876!2.09e-07!20;UBERON:0003729!2.72e-07!5;UBERON:0003100!3.70e-07!41;UBERON:0003886!4.77e-07!63;UBERON:0003887!6.51e-07!21;UBERON:0004211!6.62e-07!16;UBERON:0001285!6.62e-07!16;UBERON:0007684!6.62e-07!16;UBERON:0003220!6.62e-07!16;UBERON:0004208!6.62e-07!16;UBERON:0000481!7.08e-07!347;UBERON:0003133!9.04e-07!48 | |ontology_enrichment_uberon=UBERON:0000065!8.59e-23!53;UBERON:0004119!2.55e-22!169;UBERON:0000925!2.55e-22!169;UBERON:0006595!2.55e-22!169;UBERON:0001004!4.43e-21!72;UBERON:0008947!2.84e-20!38;UBERON:0003258!2.84e-20!38;UBERON:0001007!1.02e-19!155;UBERON:0001555!1.02e-19!155;UBERON:0007026!1.02e-19!155;UBERON:0000072!8.73e-17!46;UBERON:0000077!1.66e-16!130;UBERON:0004921!2.29e-15!129;UBERON:0004185!2.29e-15!129;UBERON:0000464!1.80e-14!104;UBERON:0005153!1.80e-13!37;UBERON:0005177!2.76e-13!107;UBERON:0000466!5.22e-13!126;UBERON:0001041!9.14e-13!98;UBERON:0001008!2.10e-12!45;UBERON:0005911!2.74e-12!82;UBERON:0000058!4.72e-12!26;UBERON:0006554!1.72e-11!44;UBERON:0003104!3.64e-11!238;UBERON:0009142!3.64e-11!238;UBERON:0003064!3.92e-11!37;UBERON:0001737!6.89e-11!9;UBERON:0002048!1.23e-10!22;UBERON:0000117!1.23e-10!22;UBERON:0000171!1.23e-10!22;UBERON:0000170!1.23e-10!22;UBERON:0005597!1.23e-10!22;UBERON:0000118!1.23e-10!22;UBERON:0005178!1.38e-10!34;UBERON:0002224!1.38e-10!34;UBERON:0005181!4.00e-10!35;UBERON:0005157!8.77e-10!51;UBERON:0000489!1.62e-09!32;UBERON:0002113!3.79e-09!27;UBERON:0003918!3.79e-09!27;UBERON:0005095!3.79e-09!27;UBERON:0007687!3.79e-09!27;UBERON:0001557!5.20e-09!19;UBERON:0009569!1.07e-08!113;UBERON:0000080!1.45e-08!18;UBERON:0002120!1.45e-08!18;UBERON:0004875!1.45e-08!18;UBERON:0005721!1.45e-08!18;UBERON:0005754!1.45e-08!18;UBERON:0007297!1.45e-08!18;UBERON:0002294!2.09e-08!7;UBERON:0001173!2.09e-08!7;UBERON:0004912!2.09e-08!7;UBERON:0000344!2.14e-08!12;UBERON:0004802!2.59e-08!19;UBERON:0000115!2.59e-08!19;UBERON:0005156!3.01e-08!59;UBERON:0000990!3.01e-08!59;UBERON:0001048!8.99e-08!168;UBERON:0006555!1.31e-07!17;UBERON:0005103!1.31e-07!17;UBERON:0000083!1.31e-07!17;UBERON:0009201!1.31e-07!17;UBERON:0004819!1.31e-07!17;UBERON:0006553!1.31e-07!17;UBERON:0003074!1.31e-07!17;UBERON:0003060!1.31e-07!17;UBERON:0004807!1.39e-07!28;UBERON:0004175!1.72e-07!25;UBERON:0004876!2.09e-07!20;UBERON:0003729!2.72e-07!5;UBERON:0003100!3.70e-07!41;UBERON:0003886!4.77e-07!63;UBERON:0003887!6.51e-07!21;UBERON:0004211!6.62e-07!16;UBERON:0001285!6.62e-07!16;UBERON:0007684!6.62e-07!16;UBERON:0003220!6.62e-07!16;UBERON:0004208!6.62e-07!16;UBERON:0000481!7.08e-07!347;UBERON:0003133!9.04e-07!48 | ||
|ontology_enrichment_uberon_v019=UBERON:0002294;1.40e-14;7!UBERON:0001173;1.40e-14;7!UBERON:0003343;3.93e-11;4!UBERON:0004785;3.93e-11;4!UBERON:0000974;5.93e-11;6!UBERON:0000058;1.82e-09;10!UBERON:0002110;3.98e-09;3!UBERON:0004211;8.36e-09;10!UBERON:0009773;8.36e-09;10!UBERON:0001231;8.36e-09;10!UBERON:0004810;8.36e-09;10!UBERON:0000489;1.76e-08;29!UBERON:0006853;2.06e-08;3!UBERON:0007685;2.06e-08;3!UBERON:0004134;2.06e-08;3!UBERON:0006554;4.01e-08;30!UBERON:0001008;4.01e-08;30!UBERON:0006555;1.74e-07;15!UBERON:0004819;1.74e-07;15!UBERON:0001285;1.74e-07;15!UBERON:0007684;1.74e-07;15!UBERON:0002394;2.27e-07;4!UBERON:0003928;2.27e-07;4!UBERON:0002113;3.99e-07;24!UBERON:0011143;3.99e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002294,4.11e-11,9;UBERON:0001173,4.11e-11,9;UBERON:0004912,4.11e-11,9;UBERON:0003343,5.56e-11,4;UBERON:0004785,5.56e-11,4;UBERON:0004119,2.82e-10,160;UBERON:0000925,2.82e-10,160;UBERON:0006595,2.82e-10,160;UBERON:0001008,6.04e-10,48;UBERON:0005177,7.21e-10,101;UBERON:0001007,1.37e-09,145;UBERON:0001555,1.37e-09,145;UBERON:0007026,1.37e-09,145;UBERON:0000489,2.57e-09,31;UBERON:0002110,4.22e-09,3;UBERON:0006242,4.22e-09,3;UBERON:0006554,8.46e-09,47;UBERON:0004810,8.89e-09,10;UBERON:0006853,2.45e-08,3;UBERON:0007685,2.45e-08,3;UBERON:0004134,2.45e-08,3;UBERON:0002113,6.76e-08,26;UBERON:0003918,6.76e-08,26;UBERON:0011143,6.76e-08,26;UBERON:0005095,6.76e-08,26;UBERON:0007687,6.76e-08,26;UBERON:0004211,1.85e-07,15;UBERON:0009773,1.85e-07,15;UBERON:0001231,1.85e-07,15;UBERON:0001285,1.85e-07,15;UBERON:0007684,1.85e-07,15;UBERON:0004208,1.85e-07,15;UBERON:0001004,5.39e-07,74;UBERON:0006555,6.25e-07,16;UBERON:0004819,6.25e-07,16;UBERON:0004921,6.32e-07,118 | |||
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| ||
|short_description=p@chr22:46022320..46022366,- | |short_description=p@chr22:46022320..46022366,- | ||
}} | }} |
Latest revision as of 22:05, 28 July 2015
Short description: | p@chr22:46022320..46022366, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:46022320..46022366, - |
Coexpression cluster: | C3016_papillotubular_mucinous_bile_signet_bronchioalveolar_tubular_clear |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.59e-33 | 253 |
endo-epithelial cell | 1.19e-10 | 42 |
endodermal cell | 2.22e-10 | 58 |
kidney tubule cell | 8.89e-09 | 10 |
nephron tubule epithelial cell | 8.89e-09 | 10 |
kidney cell | 1.54e-08 | 17 |
kidney epithelial cell | 1.54e-08 | 17 |
brush border epithelial cell | 2.45e-08 | 3 |
kidney cortex tubule cell | 2.45e-08 | 3 |
epithelial cell of proximal tubule | 2.45e-08 | 3 |
epithelial cell of nephron | 1.85e-07 | 15 |
epithelial cell of alimentary canal | 1.93e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.23e-48 | 106 |
cell type cancer | 2.20e-32 | 143 |
squamous cell carcinoma | 6.61e-32 | 14 |
cancer | 1.17e-18 | 235 |
disease of cellular proliferation | 5.38e-18 | 239 |
adenocarcinoma | 1.40e-13 | 25 |
tubular adenocarcinoma | 2.89e-07 | 2 |
signet ring cell adenocarcinoma | 9.36e-07 | 2 |