FFCP PHASE1:Hg19::chr7:27195867..27195893,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3204 | |EntrezGene=3204 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5108 | |HGNC=5108 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-250bp_to_ENST00000523796_5end | |association_with_transcript=-250bp_to_ENST00000523796_5end | ||
|cluster_id=chr7:27195867..27195893,- | |||
|description=CAGE_peak_3_at_HOXA7_5end | |description=CAGE_peak_3_at_HOXA7_5end | ||
|id=chr7:27195867..27195893,- | |id=chr7:27195867..27195893,- | ||
|ontology_enrichment_celltype=CL:1000449!5.56e-09!16;CL:0002139!8.68e-09!24;CL:1000497!1.57e-08!18;CL:0002518!1.57e-08!18;CL:0002078!9.40e-08!44;CL:0002681!4.00e-07!13;CL:0002584!4.00e-07!13;CL:0000115!6.17e-07!35;CL:1000507!8.88e-07!12;CL:1000494!8.88e-07!12 | |ontology_enrichment_celltype=CL:1000449!5.56e-09!16;CL:0002139!8.68e-09!24;CL:1000497!1.57e-08!18;CL:0002518!1.57e-08!18;CL:0002078!9.40e-08!44;CL:0002681!4.00e-07!13;CL:0002584!4.00e-07!13;CL:0000115!6.17e-07!35;CL:1000507!8.88e-07!12;CL:1000494!8.88e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:1000449;2.32e-11;15!CL:1000497;2.44e-11;17!CL:0002518;2.44e-11;17!CL:0002543;2.81e-09;6!CL:0002681;3.00e-08;12!CL:0002584;3.00e-08;12!CL:1000507;5.40e-08;10!CL:1000494;5.40e-08;10!CL:0000062;2.89e-07;9!CL:1000746;4.21e-07;7!CL:1000612;4.21e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:1000449,2.93e-11,15;CL:1000497,4.34e-11,17;CL:0002518,4.34e-11,17;CL:0002543,1.22e-09,6;CL:1000507,3.21e-08,10;CL:1000494,3.21e-08,10;CL:0002681,3.84e-08,12;CL:0002584,3.84e-08,12;CL:0002078,1.37e-07,45;CL:1000746,8.98e-07,7;CL:1000612,8.98e-07,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006554!7.05e-16!44;UBERON:0001008!3.52e-15!45;UBERON:0000489!2.09e-12!32;UBERON:0003064!3.08e-10!37;UBERON:0002113!7.61e-10!27;UBERON:0003918!7.61e-10!27;UBERON:0005095!7.61e-10!27;UBERON:0007687!7.61e-10!27;UBERON:0006555!9.07e-10!17;UBERON:0005103!9.07e-10!17;UBERON:0000083!9.07e-10!17;UBERON:0009201!9.07e-10!17;UBERON:0004819!9.07e-10!17;UBERON:0006553!9.07e-10!17;UBERON:0003074!9.07e-10!17;UBERON:0003060!9.07e-10!17;UBERON:0004211!5.56e-09!16;UBERON:0001285!5.56e-09!16;UBERON:0007684!5.56e-09!16;UBERON:0003220!5.56e-09!16;UBERON:0004208!5.56e-09!16;UBERON:0000080!7.29e-09!18;UBERON:0002120!7.29e-09!18;UBERON:0004875!7.29e-09!18;UBERON:0005721!7.29e-09!18;UBERON:0005754!7.29e-09!18;UBERON:0007297!7.29e-09!18;UBERON:0004876!1.87e-08!20;UBERON:0003887!4.29e-08!21;UBERON:0001225!4.00e-07!13;UBERON:0008987!4.00e-07!13;UBERON:0009773!8.88e-07!12;UBERON:0001231!8.88e-07!12;UBERON:0004810!8.88e-07!12;UBERON:0001638!9.87e-07!9;UBERON:0003920!9.87e-07!9;UBERON:0004582!9.87e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;2.95e-12;30!UBERON:0001008;2.95e-12;30!UBERON:0000489;2.22e-11;29!UBERON:0006555;2.32e-11;15!UBERON:0004819;2.32e-11;15!UBERON:0001285;2.32e-11;15!UBERON:0007684;2.32e-11;15!UBERON:0002113;9.81e-10;24!UBERON:0011143;9.81e-10;24!UBERON:0001225;3.00e-08;12!UBERON:0008987;3.00e-08;12!UBERON:0004211;5.40e-08;10!UBERON:0009773;5.40e-08;10!UBERON:0001231;5.40e-08;10!UBERON:0004810;5.40e-08;10!UBERON:0001473;1.15e-07;8!UBERON:0004536;1.15e-07;8!UBERON:0006558;1.15e-07;8!UBERON:0001638;1.37e-07;9!UBERON:0003920;1.37e-07;9!UBERON:0004582;1.37e-07;9!UBERON:0000074;4.21e-07;7!UBERON:0001229;4.21e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006555,1.41e-12,16;UBERON:0004819,1.41e-12,16;UBERON:0000489,5.95e-12,31;UBERON:0006554,7.29e-12,47;UBERON:0001008,1.82e-11,48;UBERON:0004211,2.93e-11,15;UBERON:0009773,2.93e-11,15;UBERON:0001231,2.93e-11,15;UBERON:0001285,2.93e-11,15;UBERON:0007684,2.93e-11,15;UBERON:0004208,2.93e-11,15;UBERON:0002113,3.55e-10,26;UBERON:0003918,3.55e-10,26;UBERON:0011143,3.55e-10,26;UBERON:0005095,3.55e-10,26;UBERON:0007687,3.55e-10,26;UBERON:0004810,3.21e-08,10;UBERON:0005103,3.81e-08,8;UBERON:0000083,3.81e-08,8;UBERON:0009201,3.81e-08,8;UBERON:0006553,3.81e-08,8;UBERON:0003074,3.81e-08,8;UBERON:0003060,3.81e-08,8;UBERON:0001225,3.84e-08,12;UBERON:0008987,3.84e-08,12;UBERON:0001473,8.64e-08,8;UBERON:0004536,8.64e-08,8;UBERON:0006558,8.64e-08,8;UBERON:0001638,9.11e-08,9;UBERON:0003920,9.11e-08,9;UBERON:0004582,9.11e-08,9;UBERON:0000080,4.32e-07,9;UBERON:0002120,4.32e-07,9;UBERON:0004875,4.32e-07,9;UBERON:0005721,4.32e-07,9;UBERON:0005754,4.32e-07,9;UBERON:0007297,4.32e-07,9;UBERON:0010532,8.98e-07,7;UBERON:0000074,8.98e-07,7;UBERON:0001229,8.98e-07,7;UBERON:0001230,8.98e-07,7;UBERON:0003220,8.98e-07,7;UBERON:0005749,8.98e-07,7;UBERON:0004199,8.98e-07,7;UBERON:0004209,8.98e-07,7;UBERON:0004198,8.98e-07,7 | |||
|phase1_expression=1.09007027562334,0.642301571672949,0.704772020479856,1.0007329835313,0.446961094427288,0,5.06599756336621,1.89515962028049,0.522371256399677,1.72013755551056,0.697801167972428,0,0,0.495065411840187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154934401160603,0,1.46800219667424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,2.50668955317945,0.724232594804119,2.3858578411533,1.45990461090791,0,0,0,1.30979075497713,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0.56530794192401,0,0.275118041940067,0.208994966536811,1.03366703667732,1.42306505074684,0.66944122552934,0.402829317109147,2.28081631715554,0.24406205754817,0.735326160691737,0.81014194788176,1.87529429396568,2.2452937262617,1.68917220724983,6.13266549863533,4.74632829784064,4.03043836646896,0,0,0,0.993943903390637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79338416662161,0.469737994575059,0.485618833104395,0.561803226808994,0,0,0,0,0,1.82032272387605,3.59309070908119,0,0,0,0,0,0,0,0.358779271377724,0.213557388818567,0.635795703478686,0,1.64884046781502,0,0.37223371266318,0.168776332241266,0.779496041289589,0.504867548488229,1.38074847963449,0,0,0.906768884048762,0.169560592310488,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,1.0647612003586,1.01150814046861,0.964044119533928,0.55146986366197,0.653638332277218,1.42362371466658,1.34831308160164,1.76599318612811,0.769494313892781,0,0,0,0,0,0,0,0,0.491953754172454,0,0.109750285408626,0,0.804231779293047,0,0,0,0,0,0,2.59859605969933,1.38895653772983,1.71228737011138,0,0,0,0,0,0,0,0,1.70161193135412,1.45316969256981,0,0,0.088048434013226,0,0,0.12624243342638,0.63497894292169,2.67391897890794,3.51652341630141,0,0.308482478109971,0.600686115687835,0,0,0,0,1.93907573636667,0,0,3.72313363218819,1.04007436911366,1.80045161983499,0,1.0656887160644,0,0.542621605391443,0,0.977208552881205,0,0,0,0,0,0,0,0,0,0,2.85273810081437,1.59259437334337,1.02738161275192,0.358121926479791,0.560425719967636,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0.736148950314839,2.50085260529839,1.08506009479894,0,0,0,0,4.51419149591578,2.27407504055985,1.03473071292505,0.664225598535437,2.58116835958384,0.695068915744663,0.195801157462741,0,0,0,0,0,0,0.30239029332968,1.98486246255021,0.61384789315225,1.40330047216537,1.53766979106841,1.53512174720011,1.60853921143608,1.48418066444991,1.3878872442239,0.710246901252508,1.47828880824856,0,0.813472649219715,1.32945394550784,0.200506470303285,0.736647911487171,0.459257792658427,2.1850940160806,1.70461739447251,0.902399225814824,0.924184045252977,1.56869953835371,4.38417673959782,1.37217117560738,1.13733384070897,1.02056223165909,2.37507507712353,4.62681758070868,1.62567862526312,2.00675909541941,1.52925763827023,3.3243040357149,1.79099803777743,0,0,0,0,0,0.206082023295445,1.37354197227515,1.15513299888823,0,0,0,1.06337790121334,0.308097234229289,0.460511024178389,0.551346289938122,0.644521469209642,0.580066775656914,0.93749290157711,0.801288320820636,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0.316379424718726,0,0.511795582622668,0,0,0,1.61885211824983,0.823611089208164,0.589062011728432,0,0,0,0,1.46228093778771,3.16950440270266,1.09199929126389,1.1312434556297,0,0,0,0,1.15755106853338,0,0,0.30982349809975,0.281695602532241,1.29070216983646,0.687743287091848,0,0,1.68886108238131,0,0,0,0,0,0,0.376575203107117,1.72202149068492,3.36942951335251,2.21715076768338,0.918893600827838,0,0,0,0,0,0,0,0,0.640944426764839,0.962479855263359,0.735120647943095,0,0,0,0.478278818186467,2.19537308576098,0.383010740264733,1.69338866179106,0,1.40398589056729,0,0,0,0.50787533340481,1.2847046008296,0.201799707191048,0.851692475380653,1.71752672377882,0.307240764308458,0.447352215784832,1.50164227540718,0.390776190804081,0,0,0,0,2.81974010175699,0.748562161632879,0.439524537815682,0,0,1.98895302764489,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,2.96579179256249,0,0,0,0,0,0.789147245095469,0,0,0,0,0,0,0,0,0,0,1.89110145414349,0.344743373241465,0,0.173624994933292,0,0,0,0,0,0,0.10893846351899,1.39423744278603,0.538651809526579,0,0,0,0,0.638002319463839,0.915975934018623,0,0,0,0,0,0,0,0,0.635746315921515,0,1.14262965711403,1.13082457147153,0,0,0.265372693510018,0,7.41302821701555,7.53740027573667,7.83164621290915,0,0,0,0,0,0,0.394584402849391,0,0,0,0.450970258243478,0.311064574191741,0,0,0,0,0.569219092059585,0,0.867798691675654,1.56787835863004,2.43765778425127,3.84398670132466,1.54787429224455,0.774050650312681,1.31560770755134,0.739039113478883,0.678923115418936,3.35373281427701,0,0,0.794858446811959,0,0.586654148204409,0,0,0.19980960958213,0,0,3.94668495082519,0,0,4.47818665771911,0,0,0,0,0,0,0,0,0,0,0,0,1.19807400299395,0,0,0,0,0,0,0,0,1.08270229666224,0,0,0,0,0,0,0,0,0,0,2.44297692627514,1.73100140845494,0,0,3.07064315711112,0,0,0,1.08599920350743,1.72844298240254,0.979762080328227,0,1.55975789423744,3.9189245010647,0.90649673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| ||
|short_description=p3@HOXA7 | |short_description=p3@HOXA7 | ||
}} | }} |
Latest revision as of 01:37, 18 September 2015
Short description: | p3@HOXA7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HOXA7_5end |
Coexpression cluster: | NA |
Association with transcript: | -250bp_to_ENST00000523796_5end |
EntrezGene: | HOXA7 |
HGNC: | 5108 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 2.93e-11 | 15 |
kidney cell | 4.34e-11 | 17 |
kidney epithelial cell | 4.34e-11 | 17 |
vein endothelial cell | 1.22e-09 | 6 |
kidney tubule cell | 3.21e-08 | 10 |
nephron tubule epithelial cell | 3.21e-08 | 10 |
kidney cortical cell | 3.84e-08 | 12 |
renal cortical epithelial cell | 3.84e-08 | 12 |
meso-epithelial cell | 1.37e-07 | 45 |
glomerular cell | 8.98e-07 | 7 |
kidney corpuscule cell | 8.98e-07 | 7 |