FFCP PHASE1:Hg19::chr20:33851644..33851656,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:33851644..33851656,+ | |||
|coexpression_cluster_id=C1867 | |||
|description=CAGE_peak_at_chr20:33851644..33851656,+ | |description=CAGE_peak_at_chr20:33851644..33851656,+ | ||
|id=chr20:33851644..33851656,+ | |id=chr20:33851644..33851656,+ | ||
|ontology_enrichment_celltype=CL:0000066!2.71e-11!254;CL:0000239!3.30e-10!3;CL:1000615!3.30e-10!3;CL:0002306!3.30e-10!3;CL:1000497!1.11e-07!18;CL:0002518!1.11e-07!18;CL:0000077!5.41e-07!19 | |ontology_enrichment_celltype=CL:0000066!2.71e-11!254;CL:0000239!3.30e-10!3;CL:1000615!3.30e-10!3;CL:0002306!3.30e-10!3;CL:1000497!1.11e-07!18;CL:0002518!1.11e-07!18;CL:0000077!5.41e-07!19 | ||
|ontology_enrichment_celltype_v019=CL:0000322;1.61e-16;3!CL:0000239;2.57e-16;3!CL:1000615;2.57e-16;3!CL:0002306;2.57e-16;3!CL:1000497;2.37e-11;17!CL:0002518;2.37e-11;17!CL:0000082;4.10e-10;19!CL:0000077;5.09e-10;19!CL:0002681;2.43e-09;12!CL:0002584;2.43e-09;12!CL:1000449;1.42e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,1.49e-16,3;CL:0000239,2.78e-16,3;CL:1000615,2.78e-16,3;CL:0002306,2.78e-16,3;CL:1000497,2.47e-11,17;CL:0002518,2.47e-11,17;CL:0000082,3.64e-10,19;CL:0000077,4.85e-10,19;CL:0000066,6.93e-10,253;CL:0002681,2.54e-09,12;CL:0002584,2.54e-09,12;CL:1000449,1.47e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0001041;8.37e-10;30!UBERON:0007297;4.55e-07;2 | |||
|ontology_enrichment_disease=DOID:305!7.44e-18!106;DOID:0050687!1.10e-16!143;DOID:162!3.54e-10!235;DOID:14566!9.09e-10!239 | |||
|ontology_enrichment_disease_v019=DOID:1324;1.24e-07;15!DOID:4468;2.35e-07;2!DOID:3910;3.18e-07;2!DOID:0050615;3.46e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:305,5.66e-08,106;DOID:1324,1.09e-07,15;DOID:4468,2.43e-07,2;DOID:3910,2.91e-07,2;DOID:0050615,3.08e-07,16;DOID:0050687,5.40e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.02e-20!9;UBERON:0008947!1.06e-12!38;UBERON:0003258!1.06e-12!38;UBERON:0002113!2.04e-11!27;UBERON:0003918!2.04e-11!27;UBERON:0005095!2.04e-11!27;UBERON:0007687!2.04e-11!27;UBERON:0006853!3.30e-10!3;UBERON:0007685!3.30e-10!3;UBERON:0004134!3.30e-10!3;UBERON:0006554!3.48e-10!44;UBERON:0001008!6.94e-10!45;UBERON:0000489!2.97e-09!32;UBERON:0001557!4.94e-09!19;UBERON:0005172!8.38e-09!55;UBERON:0005173!8.38e-09!55;UBERON:0000058!2.31e-08!26;UBERON:0000065!3.68e-08!53;UBERON:0002417!1.34e-07!61;UBERON:0000916!1.34e-07!61;UBERON:0003104!2.07e-07!238;UBERON:0009142!2.07e-07!238;UBERON:0005177!2.80e-07!107;UBERON:0000072!4.09e-07!46 | |ontology_enrichment_uberon=UBERON:0001737!1.02e-20!9;UBERON:0008947!1.06e-12!38;UBERON:0003258!1.06e-12!38;UBERON:0002113!2.04e-11!27;UBERON:0003918!2.04e-11!27;UBERON:0005095!2.04e-11!27;UBERON:0007687!2.04e-11!27;UBERON:0006853!3.30e-10!3;UBERON:0007685!3.30e-10!3;UBERON:0004134!3.30e-10!3;UBERON:0006554!3.48e-10!44;UBERON:0001008!6.94e-10!45;UBERON:0000489!2.97e-09!32;UBERON:0001557!4.94e-09!19;UBERON:0005172!8.38e-09!55;UBERON:0005173!8.38e-09!55;UBERON:0000058!2.31e-08!26;UBERON:0000065!3.68e-08!53;UBERON:0002417!1.34e-07!61;UBERON:0000916!1.34e-07!61;UBERON:0003104!2.07e-07!238;UBERON:0009142!2.07e-07!238;UBERON:0005177!2.80e-07!107;UBERON:0000072!4.09e-07!46 | ||
|ontology_enrichment_uberon_v019=UBERON:0000058;3.92e-19;10!UBERON:0004821;1.61e-16;3!UBERON:0007499;1.61e-16;3!UBERON:0003215;1.61e-16;3!UBERON:0010368;1.61e-16;3!UBERON:0009911;1.61e-16;3!UBERON:0002299;1.61e-16;3!UBERON:0006524;1.61e-16;3!UBERON:0008874;1.61e-16;3!UBERON:0002169;1.61e-16;3!UBERON:0004894;1.61e-16;3!UBERON:0006853;2.57e-16;3!UBERON:0007685;2.57e-16;3!UBERON:0004134;2.57e-16;3!UBERON:0002394;6.44e-13;4!UBERON:0003928;6.44e-13;4!UBERON:0001301;7.24e-13;1!UBERON:0009856;1.23e-12;4!UBERON:0004802;4.10e-10;19!UBERON:0000115;4.10e-10;19!UBERON:0001225;2.43e-09;12!UBERON:0008987;2.43e-09;12!UBERON:0002048;9.21e-09;22!UBERON:0004807;9.21e-09;22!UBERON:0000117;9.21e-09;22!UBERON:0000171;9.21e-09;22!UBERON:0000170;9.21e-09;22!UBERON:0002113;4.22e-08;24!UBERON:0011143;4.22e-08;24!UBERON:0002294;9.24e-08;7!UBERON:0001173;9.24e-08;7!UBERON:0001851;1.42e-07;15!UBERON:0006555;1.42e-07;15!UBERON:0000353;1.42e-07;15!UBERON:0004819;1.42e-07;15!UBERON:0001285;1.42e-07;15!UBERON:0007684;1.42e-07;15!UBERON:0004903;3.18e-07;2!UBERON:0002173;3.18e-07;2!UBERON:0002186;3.18e-07;2!UBERON:0000489;9.87e-07;29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004821,1.49e-16,3;UBERON:0003215,1.49e-16,3;UBERON:0010368,1.49e-16,3;UBERON:0009911,1.49e-16,3;UBERON:0002299,1.49e-16,3;UBERON:0006524,1.49e-16,3;UBERON:0008874,1.49e-16,3;UBERON:0002169,1.49e-16,3;UBERON:0004894,1.49e-16,3;UBERON:0006853,2.78e-16,3;UBERON:0007685,2.78e-16,3;UBERON:0004134,2.78e-16,3;UBERON:0000058,1.51e-15,19;UBERON:0001301,6.06e-13,1;UBERON:0006555,6.85e-12,16;UBERON:0004819,6.85e-12,16;UBERON:0002113,3.17e-11,26;UBERON:0003918,3.17e-11,26;UBERON:0011143,3.17e-11,26;UBERON:0005095,3.17e-11,26;UBERON:0007687,3.17e-11,26;UBERON:0004802,3.64e-10,19;UBERON:0000115,3.64e-10,19;UBERON:0000489,2.11e-09,31;UBERON:0001225,2.54e-09,12;UBERON:0008987,2.54e-09,12;UBERON:0002394,6.51e-09,6;UBERON:0003928,6.51e-09,6;UBERON:0002048,8.31e-09,22;UBERON:0000117,8.31e-09,22;UBERON:0000171,8.31e-09,22;UBERON:0000170,8.31e-09,22;UBERON:0005597,8.31e-09,22;UBERON:0000118,8.31e-09,22;UBERON:0006554,1.23e-08,47;UBERON:0001008,1.90e-08,48;UBERON:0005177,2.49e-08,101;UBERON:0005153,7.04e-08,37;UBERON:0007499,8.38e-08,25;UBERON:0008947,1.25e-07,38;UBERON:0003258,1.25e-07,38;UBERON:0001851,1.47e-07,15;UBERON:0004211,1.47e-07,15;UBERON:0009773,1.47e-07,15;UBERON:0000353,1.47e-07,15;UBERON:0001231,1.47e-07,15;UBERON:0001285,1.47e-07,15;UBERON:0007684,1.47e-07,15;UBERON:0004208,1.47e-07,15;UBERON:0009856,1.65e-07,26;UBERON:0009569,2.11e-07,112;UBERON:0004903,2.91e-07,2;UBERON:0002173,2.91e-07,2;UBERON:0002186,2.91e-07,2;UBERON:0004807,5.88e-07,28;UBERON:0002100,7.08e-07,199;UBERON:0005103,8.35e-07,8;UBERON:0000083,8.35e-07,8;UBERON:0009201,8.35e-07,8;UBERON:0006553,8.35e-07,8;UBERON:0003074,8.35e-07,8;UBERON:0003060,8.35e-07,8 | |||
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| ||
|short_description=p@chr20:33851644..33851656,+ | |short_description=p@chr20:33851644..33851656,+ | ||
}} | }} |
Latest revision as of 13:22, 28 July 2015
Short description: | p@chr20:33851644..33851656, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:33851644..33851656, + |
Coexpression cluster: | C1867_renal_bile_clear_Alveolar_mesothelioma_lung_prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 1.49e-16 | 3 |
brush border epithelial cell | 2.78e-16 | 3 |
kidney cortex tubule cell | 2.78e-16 | 3 |
epithelial cell of proximal tubule | 2.78e-16 | 3 |
kidney cell | 2.47e-11 | 17 |
kidney epithelial cell | 2.47e-11 | 17 |
epithelial cell of lung | 3.64e-10 | 19 |
mesothelial cell | 4.85e-10 | 19 |
epithelial cell | 6.93e-10 | 253 |
kidney cortical cell | 2.54e-09 | 12 |
renal cortical epithelial cell | 2.54e-09 | 12 |
epithelial cell of nephron | 1.47e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.66e-08 | 106 |
lung cancer | 1.09e-07 | 15 |
clear cell adenocarcinoma | 2.43e-07 | 2 |
lung adenocarcinoma | 2.91e-07 | 2 |
respiratory system cancer | 3.08e-07 | 16 |
cell type cancer | 5.40e-07 | 143 |