FFCP PHASE1:Hg19::chr13:113677114..113677156,-: Difference between revisions
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|id=chr13:113677114..113677156,-
|short_description=p@chr13:113677114..113677156,-
|description=CAGE_peak_at_chr13:113677114..113677156,-
|association_with_transcri...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr13:113677114..113677156,- | |||
|coexpression_cluster_id=C164 | |||
|description=CAGE_peak_at_chr13:113677114..113677156,- | |||
|id=chr13:113677114..113677156,- | |||
|ontology_enrichment_celltype=CL:0000066!3.51e-14!254 | |||
|ontology_enrichment_celltype_v019=CL:0000039;2.69e-19;7!CL:0000586;2.69e-19;7!CL:0002188;1.36e-14;5!CL:0002178;3.69e-12;3!CL:1000746;1.39e-10;7!CL:1000612;1.39e-10;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.63e-19,7;CL:0000586,2.63e-19,7;CL:0002188,1.46e-14,5;CL:0002178,3.69e-12,3;CL:1000746,1.46e-10,7;CL:1000612,1.46e-10,7;CL:0000066,3.40e-09,253 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.67e-20;10!UBERON:0005564;1.67e-20;10!UBERON:0009497;4.70e-10;13!UBERON:0004161;3.81e-07;11 | |||
|ontology_enrichment_disease=DOID:305!1.28e-09!106;DOID:0050687!1.30e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:1909;5.50e-17;2!DOID:3111;1.99e-09;1!DOID:3603;1.99e-09;1!DOID:3095;2.89e-09;22!DOID:2994;2.89e-09;22!DOID:0050687;4.40e-07;143 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,2.62e-21,143;DOID:305,6.09e-19,106;DOID:1909,3.98e-17,2;DOID:162,1.75e-11,235;DOID:14566,3.62e-11,239;DOID:3111,1.56e-09,1;DOID:3603,1.56e-09,1;DOID:3095,2.86e-09,22;DOID:2994,2.86e-09,22 | |||
|ontology_enrichment_uberon=UBERON:0004119!4.32e-08!169;UBERON:0000925!4.32e-08!169;UBERON:0006595!4.32e-08!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0000074;1.39e-10;7!UBERON:0001229;1.39e-10;7!UBERON:0000473;5.31e-10;8!UBERON:0000991;1.11e-09;21!UBERON:0000945;1.24e-07;5!UBERON:0010039;1.24e-07;5!UBERON:0003135;2.14e-07;11!UBERON:0002323;3.93e-07;45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003886,2.89e-13,54;UBERON:0002553,1.46e-11,61;UBERON:0003887,1.33e-10,12;UBERON:0010532,1.46e-10,7;UBERON:0000074,1.46e-10,7;UBERON:0001229,1.46e-10,7;UBERON:0001230,1.46e-10,7;UBERON:0003220,1.46e-10,7;UBERON:0005749,1.46e-10,7;UBERON:0004199,1.46e-10,7;UBERON:0004209,1.46e-10,7;UBERON:0004198,1.46e-10,7;UBERON:0000473,5.31e-10,8;UBERON:0000945,8.33e-10,8;UBERON:0010039,8.33e-10,8;UBERON:0000991,1.05e-09,21;UBERON:0009196,1.05e-09,21;UBERON:0009117,1.05e-09,21;UBERON:0005564,1.05e-09,21;UBERON:0005103,2.62e-09,8;UBERON:0000083,2.62e-09,8;UBERON:0009201,2.62e-09,8;UBERON:0006553,2.62e-09,8;UBERON:0003074,2.62e-09,8;UBERON:0003060,2.62e-09,8;UBERON:0004176,2.96e-09,22;UBERON:0000080,2.50e-08,9;UBERON:0002120,2.50e-08,9;UBERON:0004875,2.50e-08,9;UBERON:0005721,2.50e-08,9;UBERON:0005754,2.50e-08,9;UBERON:0007297,2.50e-08,9;UBERON:0002323,6.48e-08,46;UBERON:0003135,2.14e-07,11;UBERON:0004458,2.22e-07,49;UBERON:0004876,6.71e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.436882744260345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378139268656271,0.221729397462564,0.43917392846563,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0.17859945656816,0,0.225222960966644,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.348581828608555,0.621966330092223,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0.614942192715568,0,0.219500570817251,0,0.201057944823262,0.0925884451585296,0,0,0,0.231860809950154,0.117408694235822,0.721832238805369,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601519410909855,0,0,0,0,0,0,0,0,0,0,1.19065593693561,1.51141141271498,1.54227252690289,0,0,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0.192190067365106,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0.886860307073351,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.613612095012929,0,0,0,1.07412704805365,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,2.84483620713749,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0.0769502585037971,0,0,3.2312751987518,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,2.15231080825299,0,0.789168805698781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.365446585430928,0.0821154570532092,0,0,0,0,0,0.126621591911757,0.195551382734803,0,0.213452994739353,0,8.06906336062993,0,0,1.58460277786965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0.0671834724867263,0,0,2.52106183383116,2.22522817629149,2.15691340333392,0,0,0,0,0.964518890790115,0.412618309791701,0,0,0,0,0,0.551639951094387,0.367182116944987,0,0,0,0,0,0,0,0,0,0,0,0,1.24643300672138,0,0,0,0.13223260174269,0,4.9337051562167,0,0.157204305099666,0,0,0,0,1.27668251554036,0,0.2506898940227,0,0,0,0,0,0,0.573409195690071,0,0.124192805882767,0,0,1.66814029295813,3.14011866899464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95836972702078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,1.29766695682514,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.39246546425257,0,0.280272163313789,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,58.1049383002238,0.243835849964539,0,0.102662806856247,0,0.971421986118279,0,0,0,0,0,0,0,0.218559560503957,0,0.245148321753905,0,0,0,0,0,0.751871343838829,1.54698931136585,0,0.178553938605658,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,2.27099564703142,0.327796715891087,0.506794004045748,30.5966489225945,12.5592180474813,11.3949675423208,0,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0.684466602170562,0.0673520530145875,0.358611026963382,0.665320713092027,0.162806537221949,0,0,0,0,0,0,0.665756774185513,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.436882744260345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378139268656271,0.221729397462564,0.43917392846563,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0.17859945656816,0,0.225222960966644,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.348581828608555,0.621966330092223,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0.614942192715568,0,0.219500570817251,0,0.201057944823262,0.0925884451585296,0,0,0,0.231860809950154,0.117408694235822,0.721832238805369,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601519410909855,0,0,0,0,0,0,0,0,0,0,1.19065593693561,1.51141141271498,1.54227252690289,0,0,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0.192190067365106,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0.886860307073351,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.613612095012929,0,0,0,1.07412704805365,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,2.84483620713749,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0.0769502585037971,0,0,3.2312751987518,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,2.15231080825299,0,0.789168805698781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.365446585430928,0.0821154570532092,0,0,0,0,0,0.126621591911757,0.195551382734803,0,0.213452994739353,0,8.06906336062993,0,0,1.58460277786965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0.0671834724867263,0,0,2.52106183383116,2.22522817629149,2.15691340333392,0,0,0,0,0.964518890790115,0.412618309791701,0,0,0,0,0,0.551639951094387,0.367182116944987,0,0,0,0,0,0,0,0,0,0,0,0,1.24643300672138,0,0,0,0.13223260174269,0,4.9337051562167,0,0.157204305099666,0,0,0,0,1.27668251554036,0,0.2506898940227,0,0,0,0,0,0,0.573409195690071,0,0.124192805882767,0,0,1.66814029295813,3.14011866899464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95836972702078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,1.29766695682514,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.39246546425257,0,0.280272163313789,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,58.1049383002238,0.243835849964539,0,0.102662806856247,0,0.971421986118279,0,0,0,0,0,0,0,0.218559560503957,0,0.245148321753905,0,0,0,0,0,0.751871343838829,1.54698931136585,0,0.178553938605658,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,2.27099564703142,0.327796715891087,0.506794004045748,30.5966489225945,12.5592180474813,11.3949675423208,0,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0.684466602170562,0.0673520530145875,0.358611026963382,0.665320713092027,0.162806537221949,0,0,0,0,0,0,0.665756774185513,0,0 | ||
|short_description=p@chr13:113677114..113677156,- | |||
}} | }} |
Latest revision as of 14:43, 24 July 2015
Short description: | p@chr13:113677114..113677156, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:113677114..113677156, - |
Coexpression cluster: | C164_signet_corpus_optic_mucinous_substantia_salivary_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.63e-19 | 7 |
germ cell | 2.63e-19 | 7 |
glomerular endothelial cell | 1.46e-14 | 5 |
epithelial cell of stomach | 3.69e-12 | 3 |
glomerular cell | 1.46e-10 | 7 |
kidney corpuscule cell | 1.46e-10 | 7 |
epithelial cell | 3.40e-09 | 253 |
Ontology term | p-value | n |
---|---|---|
body cavity precursor | 2.89e-13 | 54 |
anatomical cavity | 1.46e-11 | 61 |
intraembryonic coelom | 1.33e-10 | 12 |
primitive nephron | 1.46e-10 | 7 |
renal glomerulus | 1.46e-10 | 7 |
renal corpuscle | 1.46e-10 | 7 |
glomerular capsule | 1.46e-10 | 7 |
metanephric mesenchyme | 1.46e-10 | 7 |
glomerular tuft | 1.46e-10 | 7 |
S-shaped body | 1.46e-10 | 7 |
renal vesicle | 1.46e-10 | 7 |
comma-shaped body | 1.46e-10 | 7 |
testis | 5.31e-10 | 8 |
stomach | 8.33e-10 | 8 |
food storage organ | 8.33e-10 | 8 |
gonad | 1.05e-09 | 21 |
indifferent external genitalia | 1.05e-09 | 21 |
indifferent gonad | 1.05e-09 | 21 |
gonad primordium | 1.05e-09 | 21 |
mesonephric epithelium | 2.62e-09 | 8 |
mesonephric tubule | 2.62e-09 | 8 |
nephric duct | 2.62e-09 | 8 |
renal duct | 2.62e-09 | 8 |
mesonephric duct | 2.62e-09 | 8 |
pronephric duct | 2.62e-09 | 8 |
external genitalia | 2.96e-09 | 22 |
mesonephros | 2.50e-08 | 9 |
pronephros | 2.50e-08 | 9 |
nephrogenic cord | 2.50e-08 | 9 |
pronephric mesoderm | 2.50e-08 | 9 |
rostral part of nephrogenic cord | 2.50e-08 | 9 |
presumptive pronephric mesoderm | 2.50e-08 | 9 |
body cavity | 6.48e-08 | 46 |
male reproductive organ | 2.14e-07 | 11 |
body cavity or lining | 2.22e-07 | 49 |
urogenital ridge | 6.71e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 2.62e-21 | 143 |
carcinoma | 6.09e-19 | 106 |
melanoma | 3.98e-17 | 2 |
cancer | 1.75e-11 | 235 |
disease of cellular proliferation | 3.62e-11 | 239 |
cystadenocarcinoma | 1.56e-09 | 1 |
mucinous cystadenocarcinoma | 1.56e-09 | 1 |
germ cell and embryonal cancer | 2.86e-09 | 22 |
germ cell cancer | 2.86e-09 | 22 |