FFCP PHASE1:Hg19::chr13:110802503..110802522,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr13:110802503..110802522,-
|short_description=p9@COL4A1
|description=CAGE_peak_9_at_COL4A1_5end
|association_with_transcript=186bp_to_M10941_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1282 | |EntrezGene=1282 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=2202 | |HGNC=2202 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=186bp_to_M10941_5end | |||
|cluster_id=chr13:110802503..110802522,- | |||
|coexpression_cluster_id=C566 | |||
|description=CAGE_peak_9_at_COL4A1_5end | |||
|id=chr13:110802503..110802522,- | |||
|ontology_enrichment_celltype=CL:1000612!2.32e-07!7;CL:1000746!2.32e-07!7;CL:0005020!2.95e-07!6;CL:0002138!2.95e-07!6;CL:0005022!2.95e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002138;2.70e-20;6!CL:1000746;4.43e-13;7!CL:1000612;4.43e-13;7!CL:0000115;1.67e-10;36!CL:0000136;3.18e-09;13!CL:0000669;6.16e-09;4!CL:0000650;2.74e-08;2!CL:1000500;2.74e-08;2!CL:1000618;2.74e-08;2!CL:1001318;2.74e-08;2!CL:0002549;2.74e-08;2!CL:0002173;2.74e-08;2!CL:0002139;4.83e-08;24!CL:0002078;8.13e-08;45!CL:0002195;1.62e-07;2!CL:0002571;1.62e-07;2!CL:0002617;1.62e-07;2!CL:0002681;1.82e-07;12!CL:0002584;1.82e-07;12!CL:0002188;2.84e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,1.55e-20,6;CL:0002138,1.55e-20,6;CL:0005022,1.55e-20,6;CL:1000746,6.02e-13,7;CL:1000612,6.02e-13,7;CL:0000115,1.84e-11,36;CL:0002078,2.99e-10,45;CL:0000669,5.87e-09,4;CL:0000213,1.16e-08,58;CL:0000215,1.16e-08,58;CL:0002549,1.72e-08,2;CL:0000650,2.56e-08,2;CL:1000500,2.56e-08,2;CL:1000618,2.56e-08,2;CL:1001318,2.56e-08,2;CL:0002173,2.56e-08,2;CL:0002139,4.58e-08,24;CL:0000136,8.61e-08,15;CL:0002681,2.15e-07,12;CL:0002584,2.15e-07,12;CL:0002195,2.60e-07,2;CL:0002571,2.60e-07,2;CL:0002617,3.07e-07,2;CL:0002188,3.82e-07,5 | |||
|ontology_enrichment_development_v019=CL:0005022;2.70e-20;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002417!6.14e-09!61;UBERON:0000916!6.14e-09!61;UBERON:0000074!2.32e-07!7;UBERON:0001229!2.32e-07!7;UBERON:0001230!2.32e-07!7;UBERON:0005749!2.32e-07!7;UBERON:0004199!2.32e-07!7;UBERON:0004209!2.32e-07!7;UBERON:0004198!2.32e-07!7;UBERON:0000353!4.19e-07!17;UBERON:0009569!8.51e-07!113;UBERON:0001473!9.67e-07!8;UBERON:0004536!9.67e-07!8;UBERON:0006558!9.67e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0001473;4.64e-15;8!UBERON:0004536;4.64e-15;8!UBERON:0006558;4.64e-15;8!UBERON:0000074;4.43e-13;7!UBERON:0001229;4.43e-13;7!UBERON:0002465;6.47e-12;10!UBERON:0005284;2.65e-11;5!UBERON:0005629;2.74e-08;2!UBERON:0003567;2.74e-08;2!UBERON:0003838;2.74e-08;2!UBERON:0003586;2.74e-08;2!UBERON:0005358;2.74e-08;2!UBERON:0005169;2.74e-08;2!UBERON:0002321;2.74e-08;2!UBERON:0001886;2.74e-08;2!UBERON:0005215;2.74e-08;2!UBERON:0002303;2.74e-08;2!UBERON:0004086;2.74e-08;2!UBERON:0002319;2.74e-08;2!UBERON:0005282;2.74e-08;2!UBERON:0005281;2.74e-08;2!UBERON:0000353;4.17e-08;15!UBERON:0001225;1.82e-07;12!UBERON:0008987;1.82e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,3.08e-15,8;UBERON:0004536,3.08e-15,8;UBERON:0006558,3.08e-15,8;UBERON:0010532,6.02e-13,7;UBERON:0000074,6.02e-13,7;UBERON:0001229,6.02e-13,7;UBERON:0001230,6.02e-13,7;UBERON:0003220,6.02e-13,7;UBERON:0005749,6.02e-13,7;UBERON:0004199,6.02e-13,7;UBERON:0004209,6.02e-13,7;UBERON:0004198,6.02e-13,7;UBERON:0002465,4.69e-12,10;UBERON:0005284,1.31e-11,5;UBERON:0005103,2.78e-11,8;UBERON:0000083,2.78e-11,8;UBERON:0009201,2.78e-11,8;UBERON:0006553,2.78e-11,8;UBERON:0003074,2.78e-11,8;UBERON:0003060,2.78e-11,8;UBERON:0004876,2.98e-11,11;UBERON:0000080,5.48e-10,9;UBERON:0002120,5.48e-10,9;UBERON:0004875,5.48e-10,9;UBERON:0005721,5.48e-10,9;UBERON:0005754,5.48e-10,9;UBERON:0007297,5.48e-10,9;UBERON:0005629,1.72e-08,2;UBERON:0005358,1.72e-08,2;UBERON:0001886,1.72e-08,2;UBERON:0004086,1.72e-08,2;UBERON:0005282,1.72e-08,2;UBERON:0005281,1.72e-08,2;UBERON:0002417,2.14e-08,60;UBERON:0000916,2.14e-08,60;UBERON:0003567,2.56e-08,2;UBERON:0003838,2.56e-08,2;UBERON:0003586,2.56e-08,2;UBERON:0005169,2.56e-08,2;UBERON:0002321,2.56e-08,2;UBERON:0005215,2.56e-08,2;UBERON:0002303,2.56e-08,2;UBERON:0002319,2.56e-08,2;UBERON:0000353,4.71e-08,15;UBERON:0001225,2.15e-07,12;UBERON:0008987,2.15e-07,12;UBERON:0003887,2.15e-07,12 | |||
|phase1_expression=1.09007027562334,1.07050261945492,2.53717927372748,4.00293193412522,0.893922188854576,0.872338524100369,5.06599756336621,0.631719873426831,1.30592814099919,0.491467873003018,0.697801167972428,0,0.527533956456907,0,0,0,0,0.730310090387373,0,0,0.204000691244253,0.313454721478088,0.286235987131057,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0.50133791063589,0,0,0,0.0945348171640679,0,0.263504357079378,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0.208994966536811,1.55050055501597,1.06729878806013,2.34304428935269,2.01414658554573,0,0.976248230192678,0,2.43042584364528,0.357198913136319,0,0,0,0,0.183201743930407,0,0,0,2.98183171017191,0.379891534993739,0,0,0,0,2.1349799145941,1.97334038733728,0,0.942974704487816,0.653847612453835,2.57307626996383,2.88087962239999,0,0.312160076830321,0,0,0,0,0,0.204154171254893,0,0,0,0.494533858557114,0.910161361938026,0,0,0,0,0.438977620880838,0,0.150238058906597,0.907457465280168,0.538168907066586,0.85422955527427,0.423863802319124,0,0,0.257640540045629,0.18611685633159,0.168776332241266,0.0974370051611986,0,0.0920498986422993,0,0.355009592516614,0.302256294682921,0,0,0.818238361772504,0,0.243947412259191,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0,1.4763109092493,0,0.4115740113314,2.94017422771084,0,0,0.590789906681404,0,0,0,0,0,0.100528972411631,0,0,0,1.44331342025273,0.231860809950154,0.587043471179108,2.59859605969933,1.85194205030644,2.85381228351897,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0.126995788584338,0,0,0,0.411309970813294,0,0,0.224262168690721,0,0.51336800074665,0.387815147273333,0,2.535908257668,2.39344304926383,0,0,0,0,1.00084595560703,1.62786481617433,0.823240336780769,0.65147236858747,1.42156779497018,0.791951872933429,0,0,0.899756920638513,0,0,0,0.958499421966331,0,0,0.434343920002738,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.356857977594324,0.946214490203608,0.117141414992713,0,0,0,0.664225598535437,0.184369168541703,0,3.52442083432933,0.686286847621712,0,0,0,0,0,0,0.744323423456331,0.306923946576125,0.280660094433074,0.768834895534206,0.511707249066704,2.73451665944133,0,0,0,0,0,0,0,0.200506470303285,0,0.229628896329213,0.182091168006717,0.131124414959424,0.451199612907412,0.15403067420883,0,0,0.633309773357254,2.27466768141793,0.170093705276516,2.15915916102139,9.25363516141736,2.43851793789468,2.50844886927427,0,0,0,0,0,0,1.64007322849853,0,0.206082023295445,0,0,0,0.650060246036521,0,0,0,0,0,0,0.145016693914229,0.255679882248303,0,0,0.576570202095319,0.127612712494584,0.10115778085555,0,0,0,0,1.06461206063404,0,0,0.286249773483982,0.744316738719335,1.58189712359363,1.5250415513906,0,0.42793898803392,0,0,0.179872457583315,1.09814811894422,0.235624804691373,0,0,0,0.48763373908959,0.243713489631284,0,0.272999822815972,0.141405431953713,0,0,0,0,0,0,0.405820753925408,0,0.845086807596724,0.143411352204052,0.0982490410131212,0.35667105148125,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,0.996239941255349,0.828851746593443,0,0.102268682502155,0,0.933118762985422,0,0,0,0.887790650732402,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0.448788222048861,0.108647371922008,0.957003479195758,0.824378340616761,3.73124343213044,0,0,0,0,0,0,0,0,0.210998064528027,0.489698424477443,0,0.216388639742091,0,0.0884575645033392,0.611030144933625,0.296521128680622,0.123563938946503,0.208843899010911,0,2.40773294189637,0,0,0,0,0.394584402849391,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.34945333648406,0,0,0,0.0821154570532092,0.0969890164884194,0,0.451961481561065,0.274083849293502,0,0,0,0,0.213452994739353,0,0,0,0,0.288109595976299,0,0,0.543616824294456,0,0,0,0,0,0,1.71906176567983,0,0,0.916641696046735,1.43574604915363,0.199679000498991,0,0.223171457441873,0.268733889946905,4.68389848605125,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0,0,0,0,0.157611414598396,0.314727528809989,0,0,0,0,0.662091970365432,0,0,0.864221491201268,0,0,0,0,0,0,1.32506888912221,0.387848869084652,0,0,0,0.213574825135389,0.471612915298998,0.414239055347196,0.496166021811951,0,0,0.638341257770182,0.544017803369474,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554805861502613,0,0.251567901752575,0,0,0.151230923763239,0,0,0.159296767163702,0,0.155262956876259,0.829412415681711,1.86089200190596,1.5652351854352,0.150257608997218,0,0,1.27294061441792,0.214821114084977,0,0.796191777397232,0.400027764663154,0,0,0,0,0.214441591374926,0.260994291965212,0,0,0,0.358177682162975,2.16161013012681,0,0,0.38582807654183,0.168942440653073,2.30617366729152,0.345430341731199,0,0,0,0,0,0.982829546539238,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.226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| ||
|short_description=p9@COL4A1 | |||
}} | }} |
Latest revision as of 12:16, 16 September 2015
Short description: | p9@COL4A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_COL4A1_5end |
Coexpression cluster: | C566_Pericytes_Renal_hepatic_Fibroblast_Endothelial_Hepatic_Lens |
Association with transcript: | 186bp_to_M10941_5end |
EntrezGene: | COL4A1 |
HGNC: | 2202 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 1.55e-20 | 6 |
endothelial cell of lymphatic vessel | 1.55e-20 | 6 |
vascular lymphangioblast | 1.55e-20 | 6 |
glomerular cell | 6.02e-13 | 7 |
kidney corpuscule cell | 6.02e-13 | 7 |
endothelial cell | 1.84e-11 | 36 |
meso-epithelial cell | 2.99e-10 | 45 |
pericyte cell | 5.87e-09 | 4 |
lining cell | 1.16e-08 | 58 |
barrier cell | 1.16e-08 | 58 |
fibroblast of choroid plexus | 1.72e-08 | 2 |
mesangial cell | 2.56e-08 | 2 |
kidney interstitial cell | 2.56e-08 | 2 |
juxtaglomerular complex cell | 2.56e-08 | 2 |
renal interstitial pericyte | 2.56e-08 | 2 |
extraglomerular mesangial cell | 2.56e-08 | 2 |
endothelial cell of vascular tree | 4.58e-08 | 24 |
fat cell | 8.61e-08 | 15 |
kidney cortical cell | 2.15e-07 | 12 |
renal cortical epithelial cell | 2.15e-07 | 12 |
hepatic stem cell | 2.60e-07 | 2 |
hepatic mesenchymal stem cell | 2.60e-07 | 2 |
adipocyte of breast | 3.07e-07 | 2 |
glomerular endothelial cell | 3.82e-07 | 5 |