FFCP PHASE1:Hg19::chr1:54203726..54203742,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|EntrezGene= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=148979 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
| | |cluster_id=chr1:54203726..54203742,- | ||
|description=CAGE_peak_4_at_GLIS1_5end | |||
|id=chr1:54203726..54203742,- | |id=chr1:54203726..54203742,- | ||
|ontology_enrichment_celltype=CL:0000055!1.59e-13!180;CL:0000183!5.76e-09!59;CL:0000680!4.36e-08!57;CL:0000056!4.36e-08!57;CL:0000355!4.36e-08!57;CL:1000449!7.03e-08!16;CL:0000188!8.32e-08!9;CL:0000057!2.28e-07!75;CL:1000497!8.92e-07!18;CL:0002518!8.92e-07!18 | |ontology_enrichment_celltype=CL:0000055!1.59e-13!180;CL:0000183!5.76e-09!59;CL:0000680!4.36e-08!57;CL:0000056!4.36e-08!57;CL:0000355!4.36e-08!57;CL:1000449!7.03e-08!16;CL:0000188!8.32e-08!9;CL:0000057!2.28e-07!75;CL:1000497!8.92e-07!18;CL:0002518!8.92e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0002603;1.79e-14;3!CL:0000708;2.42e-14;3!CL:1000746;2.06e-13;7!CL:1000612;2.06e-13;7!CL:0000669;5.44e-11;4!CL:1000449;7.68e-11;15!CL:0000062;1.36e-10;9!CL:1000497;1.37e-09;17!CL:0002518;1.37e-09;17!CL:0002188;7.85e-09;5!CL:0002681;4.80e-08;12!CL:0002584;4.80e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002603,1.85e-14,3;CL:0000708,2.12e-14,3;CL:1000746,1.89e-13,7;CL:1000612,1.89e-13,7;CL:0000669,5.44e-11,4;CL:1000449,6.41e-11,15;CL:1000497,1.17e-09,17;CL:0002518,1.17e-09,17;CL:0000062,6.99e-09,11;CL:0000375,6.99e-09,11;CL:0000335,6.99e-09,11;CL:0002188,7.55e-09,5;CL:0002681,4.58e-08,12;CL:0002584,4.58e-08,12 | |||
|ontology_enrichment_development_v019=CL:0000335;9.24e-09;11 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3347;1.12e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3347,1.06e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0002200!9.16e-12!11;UBERON:0006876!9.16e-12!11;UBERON:0000475!4.01e-11!365;UBERON:0005256!4.79e-11!143;UBERON:0000914!2.24e-10!83;UBERON:0002329!2.24e-10!83;UBERON:0003077!2.24e-10!83;UBERON:0003059!2.24e-10!83;UBERON:0007282!2.24e-10!83;UBERON:0009618!2.24e-10!83;UBERON:0007285!2.24e-10!83;UBERON:0004290!8.21e-09!70;UBERON:0000080!2.19e-08!18;UBERON:0002120!2.19e-08!18;UBERON:0004875!2.19e-08!18;UBERON:0005721!2.19e-08!18;UBERON:0005754!2.19e-08!18;UBERON:0007297!2.19e-08!18;UBERON:0002113!3.15e-08!27;UBERON:0003918!3.15e-08!27;UBERON:0005095!3.15e-08!27;UBERON:0007687!3.15e-08!27;UBERON:0006554!6.35e-08!44;UBERON:0004211!7.03e-08!16;UBERON:0001285!7.03e-08!16;UBERON:0007684!7.03e-08!16;UBERON:0003220!7.03e-08!16;UBERON:0004208!7.03e-08!16;UBERON:0001008!1.20e-07!45;UBERON:0000488!1.83e-07!4;UBERON:0002203!1.90e-07!6;UBERON:0001768!1.90e-07!6;UBERON:0000486!2.13e-07!82;UBERON:0004876!2.62e-07!20;UBERON:0006555!2.71e-07!17;UBERON:0005103!2.71e-07!17;UBERON:0000083!2.71e-07!17;UBERON:0009201!2.71e-07!17;UBERON:0004819!2.71e-07!17;UBERON:0006553!2.71e-07!17;UBERON:0003074!2.71e-07!17;UBERON:0003060!2.71e-07!17;UBERON:0001134!3.33e-07!61;UBERON:0002036!3.33e-07!61;UBERON:0003082!3.33e-07!61;UBERON:0003064!7.38e-07!37;UBERON:0003887!7.56e-07!21;UBERON:0000481!7.84e-07!347;UBERON:0002385!8.28e-07!63;UBERON:0001015!8.28e-07!63;UBERON:0000383!8.28e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0003210;2.42e-14;3!UBERON:0000074;2.06e-13;7!UBERON:0001229;2.06e-13;7!UBERON:0006555;7.68e-11;15!UBERON:0004819;7.68e-11;15!UBERON:0001285;7.68e-11;15!UBERON:0007684;7.68e-11;15!UBERON:0001225;4.80e-08;12!UBERON:0008987;4.80e-08;12!UBERON:0002037;1.11e-07;6!UBERON:0002113;7.74e-07;24!UBERON:0011143;7.74e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003210,2.12e-14,3;UBERON:0010532,1.89e-13,7;UBERON:0000074,1.89e-13,7;UBERON:0001229,1.89e-13,7;UBERON:0001230,1.89e-13,7;UBERON:0003220,1.89e-13,7;UBERON:0005749,1.89e-13,7;UBERON:0004199,1.89e-13,7;UBERON:0004209,1.89e-13,7;UBERON:0004198,1.89e-13,7;UBERON:0005103,7.70e-12,8;UBERON:0000083,7.70e-12,8;UBERON:0009201,7.70e-12,8;UBERON:0006553,7.70e-12,8;UBERON:0003074,7.70e-12,8;UBERON:0003060,7.70e-12,8;UBERON:0004211,6.41e-11,15;UBERON:0009773,6.41e-11,15;UBERON:0001231,6.41e-11,15;UBERON:0001285,6.41e-11,15;UBERON:0007684,6.41e-11,15;UBERON:0004208,6.41e-11,15;UBERON:0000080,1.38e-10,9;UBERON:0002120,1.38e-10,9;UBERON:0004875,1.38e-10,9;UBERON:0005721,1.38e-10,9;UBERON:0005754,1.38e-10,9;UBERON:0007297,1.38e-10,9;UBERON:0006555,3.00e-10,16;UBERON:0004819,3.00e-10,16;UBERON:0004876,9.38e-09,11;UBERON:0001225,4.58e-08,12;UBERON:0008987,4.58e-08,12;UBERON:0003887,4.58e-08,12;UBERON:0002037,1.13e-07,6;UBERON:0006215,1.13e-07,6 | |||
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| ||
|short_description= | |short_description=p4@GLIS1 | ||
}} | }} |
Latest revision as of 14:00, 18 September 2015
Short description: | p4@GLIS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GLIS1_5end |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | GLIS1 |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebellum | 1.85e-14 | 3 |
leptomeningeal cell | 2.12e-14 | 3 |
glomerular cell | 1.89e-13 | 7 |
kidney corpuscule cell | 1.89e-13 | 7 |
pericyte cell | 5.44e-11 | 4 |
epithelial cell of nephron | 6.41e-11 | 15 |
kidney cell | 1.17e-09 | 17 |
kidney epithelial cell | 1.17e-09 | 17 |
osteoblast | 6.99e-09 | 11 |
osteoprogenitor cell | 6.99e-09 | 11 |
mesenchyme condensation cell | 6.99e-09 | 11 |
glomerular endothelial cell | 7.55e-09 | 5 |
kidney cortical cell | 4.58e-08 | 12 |
renal cortical epithelial cell | 4.58e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
blood-cerebrospinal fluid barrier | 2.12e-14 | 3 |
primitive nephron | 1.89e-13 | 7 |
renal glomerulus | 1.89e-13 | 7 |
renal corpuscle | 1.89e-13 | 7 |
glomerular capsule | 1.89e-13 | 7 |
metanephric mesenchyme | 1.89e-13 | 7 |
glomerular tuft | 1.89e-13 | 7 |
S-shaped body | 1.89e-13 | 7 |
renal vesicle | 1.89e-13 | 7 |
comma-shaped body | 1.89e-13 | 7 |
mesonephric epithelium | 7.70e-12 | 8 |
mesonephric tubule | 7.70e-12 | 8 |
nephric duct | 7.70e-12 | 8 |
renal duct | 7.70e-12 | 8 |
mesonephric duct | 7.70e-12 | 8 |
pronephric duct | 7.70e-12 | 8 |
nephron epithelium | 6.41e-11 | 15 |
renal tubule | 6.41e-11 | 15 |
nephron tubule | 6.41e-11 | 15 |
nephron | 6.41e-11 | 15 |
uriniferous tubule | 6.41e-11 | 15 |
nephrogenic mesenchyme | 6.41e-11 | 15 |
mesonephros | 1.38e-10 | 9 |
pronephros | 1.38e-10 | 9 |
nephrogenic cord | 1.38e-10 | 9 |
pronephric mesoderm | 1.38e-10 | 9 |
rostral part of nephrogenic cord | 1.38e-10 | 9 |
presumptive pronephric mesoderm | 1.38e-10 | 9 |
excretory tube | 3.00e-10 | 16 |
kidney epithelium | 3.00e-10 | 16 |
urogenital ridge | 9.38e-09 | 11 |
cortex of kidney | 4.58e-08 | 12 |
renal parenchyma | 4.58e-08 | 12 |
intraembryonic coelom | 4.58e-08 | 12 |
cerebellum | 1.13e-07 | 6 |
rhombic lip | 1.13e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
osteosarcoma | 1.06e-11 | 1 |