FFCP PHASE1:Hg19::chr4:53617798..53617813,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100288413 | |EntrezGene=100288413 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=42970 | |HGNC=42970 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H9K5 | |UniProt=Q9H9K5 | ||
|association_with_transcript=0bp_to_ENST00000443173,NM_001242690,NM_024534_5end | |association_with_transcript=0bp_to_ENST00000443173,NM_001242690,NM_024534_5end | ||
|cluster_id=chr4:53617798..53617813,- | |||
|coexpression_cluster_id=C1586 | |||
|description=CAGE_peak_2_at_ERVMER34-1_5end | |description=CAGE_peak_2_at_ERVMER34-1_5end | ||
|id=chr4:53617798..53617813,- | |id=chr4:53617798..53617813,- | ||
|ontology_enrichment_celltype=CL:0000066!1.06e-19!254;CL:0002076!2.78e-09!43 | |ontology_enrichment_celltype=CL:0000066!1.06e-19!254;CL:0002076!2.78e-09!43 | ||
|ontology_enrichment_celltype_v019=CL:0002322;7.25e-15;5!CL:1000449;2.23e-10;15!CL:0002681;2.61e-10;12!CL:0002584;2.61e-10;12!CL:1000497;5.41e-09;17!CL:0002518;5.41e-09;17!CL:0002586;1.67e-08;3!CL:0000307;1.67e-08;3!CL:0002535;5.53e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.83e-20,253;CL:0002322,4.91e-15,5;CL:0002681,2.88e-10,12;CL:0002584,2.88e-10,12;CL:1000449,3.22e-10,15;CL:1000497,7.45e-09,17;CL:0002518,7.45e-09,17;CL:0002586,1.29e-08,3;CL:0000068,3.81e-08,3;CL:0000069,3.81e-08,3;CL:0000307,3.81e-08,3;CL:0000377,3.81e-08,3;CL:0002535,5.58e-07,2;CL:0002253,9.61e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000377;1.67e-08;3 | |||
|ontology_enrichment_disease=DOID:305!2.37e-10!106;DOID:0050687!3.31e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:1749;5.61e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,7.61e-09,14;DOID:305,9.86e-09,106;DOID:0050687,3.56e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0000064!2.65e-13!219;UBERON:0004119!2.27e-10!169;UBERON:0000925!2.27e-10!169;UBERON:0006595!2.27e-10!169;UBERON:0000119!2.30e-10!312;UBERON:0000481!2.51e-10!347;UBERON:0000483!3.74e-10!309;UBERON:0000062!4.58e-10!511;UBERON:0000922!7.24e-09!612;UBERON:0007023!4.15e-08!115;UBERON:0000464!5.34e-08!104;UBERON:0000033!5.82e-08!123;UBERON:0003056!7.97e-08!61;UBERON:0000153!1.11e-07!129;UBERON:0007811!1.11e-07!129;UBERON:0003075!1.40e-07!86;UBERON:0007284!1.40e-07!86;UBERON:0001008!1.51e-07!45;UBERON:0004121!1.79e-07!169;UBERON:0000468!2.41e-07!659;UBERON:0000923!2.49e-07!604;UBERON:0005291!2.49e-07!604;UBERON:0006598!2.49e-07!604;UBERON:0002532!2.49e-07!604;UBERON:0002050!3.10e-07!605;UBERON:0005423!3.10e-07!605;UBERON:0000924!3.42e-07!173;UBERON:0006601!3.42e-07!173;UBERON:0006554!3.96e-07!44;UBERON:0002346!4.13e-07!90;UBERON:0000467!6.41e-07!625;UBERON:0001007!7.04e-07!155;UBERON:0001555!7.04e-07!155;UBERON:0007026!7.04e-07!155;UBERON:0000480!7.93e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;2.23e-10;15!UBERON:0004819;2.23e-10;15!UBERON:0001285;2.23e-10;15!UBERON:0007684;2.23e-10;15!UBERON:0001225;2.61e-10;12!UBERON:0008987;2.61e-10;12!UBERON:0001781;1.67e-08;3!UBERON:0001782;1.67e-08;3!UBERON:0001851;4.93e-08;15!UBERON:0000353;4.93e-08;15!UBERON:0006554;3.46e-07;30!UBERON:0001008;3.46e-07;30!UBERON:0006955;5.53e-07;2!UBERON:0004801;5.53e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001225,2.88e-10,12;UBERON:0008987,2.88e-10,12;UBERON:0004211,3.22e-10,15;UBERON:0009773,3.22e-10,15;UBERON:0001231,3.22e-10,15;UBERON:0001285,3.22e-10,15;UBERON:0007684,3.22e-10,15;UBERON:0004208,3.22e-10,15;UBERON:0006555,1.71e-09,16;UBERON:0004819,1.71e-09,16;UBERON:0001782,1.29e-08,3;UBERON:0005424,1.29e-08,3;UBERON:0001851,5.32e-08,15;UBERON:0000353,5.32e-08,15;UBERON:0006955,5.58e-07,2;UBERON:0004801,5.58e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,2.09340350391728,0.655324116390517,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0.376627918784408,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472674085820339,0.221729397462564,0.351339142772504,0.327447688744282,1.82147644146271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0.234321431833797,0,0,0,0.469737994575059,0.485618833104395,0.421352420106746,0,0.122834317311768,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773043412653187,0,1.14721838155602,4.14710600840624,3.18071443971565,2.67246068599892,1.86589899027667,2.52320850875628,0,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0.590789906681404,0,0.491953754172454,0.343135620597051,1.97550513735526,1.1240175325762,0.703702806881416,1.01847289674383,0,1.03993478527958,0,0.34779121492523,0.939269553886573,0,0,0,0,0,0,0,0,0.93733833986777,0.839910640994298,0.992425680696705,1.79117045405697,1.16253575405585,0.383382679165211,0,0,0,0,0,0.126995788584338,0,0,0,0.205654985406647,0,0,0.112131084345361,0,0.22001485746285,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0.30239029332968,0,0,0,0.256278298511402,0,0,0,0,0,0,0,0,0.846016147141356,0,1.47329582297434,0.229628896329213,0,0,1.35359883872224,1.38627606787947,0,0,1.05551628892876,0,0,1.0795795805107,1.54227252690289,0,0,3.82314409567557,1.66215201785745,0.895499018888713,0,0,1.28225062558195,1.31205858279882,1.95227036798582,0.721287081534056,1.09883357782012,0.990113999047056,1.72279661398852,1.95018073810956,0,0,0.154048617114644,0.15350367472613,0.137836572484531,0,0.145016693914229,0.0852266274161009,0,0.661139661443912,0.768760269460425,0.255225424989168,2.52894452138875,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0.359744915166629,0.54907405947211,0.235624804691373,0,0,0,1.95053495635836,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0.379473173765715,0,1.25088746543166,1.34060455107157,1.08890984861323,0.564862804660675,0.86101074534246,3.36942951335251,0.886860307073351,1.37834040124176,0,0,0,0,0,0,0,0,0,0,2.69544237579135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,1.68426486367398,0,0,0,0,0,0,0,0.994147647766298,0.422008249231538,0,0,0,0,0.276283915531148,2.01546198283421,0,0,0,0.449341755736634,0,0,0.197286811273867,0,0,0,0.834912883456661,0,0.260427761085233,1.04951999995435,0,1.365521379426,1.27126825146383,1.89110145414349,0.344743373241465,0.583209226766509,1.38899995946634,0,0,1.52581736317083,0.331737779793674,0,0.219385397153973,0,0.697118721393016,0.307801034015188,0,17.5228567334926,0,7.27937391877454,0.31900115973192,0,0.533034776018635,0,0,0,0.676786981851542,0.392125068635479,0.503464760927528,0,0,0.210998064528027,1.95879369790977,2.54435528581093,1.73110911793673,0,0.0884575645033392,0,0,0,0,0.134802265961354,0,0,0,1.36965233252463,0,0,0,0.91821828489147,0.063186579628488,0.300646838828985,0.622129148383483,0,0,0,0,0.853828638089378,0,0.867798691675654,0.489961987071888,2.96001302373369,0.17472666824203,0,0,0,0,0.775912131907355,0,0,0,0,0.443175571691151,0.195551382734803,0,0.213452994739353,0,1.15272333723285,0.343609788497747,0,0.720273989940749,0,0.235694034616795,0,0,0,0,0,0.136905378891993,0,0,0,0,0.687481272035051,0,0.798716001995964,1.71690419254628,0.89268582976749,2.68733889946905,0,0,0.0787831823072236,0,0,0,0,0,0.136203406111576,3.3758161177654,3.85110422472255,1.24632101408756,0,0,0.607495566580247,0,0.709251365692784,0.891727998294968,0,0.896436696664224,2.30298236783334,2.85878130549347,1.32418394073086,0,0,0,0,0,3.03742326772554,0,0.113312091520126,0,0,0.129282956361551,0,0.513260513652988,0.704815022316672,0.747511887973863,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,7.85270481251171,0,1.46431517882356,0.625954653532499,0,0.110929051536852,0.124192805882767,0,0,0,0,0.235265819698172,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0.643324774124777,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0.553033744606923,0,0,0,0.655219697692825,0.245772908753719,0,0,0.640150378164845,0,0,0,1.81843360035278,0,0,0,0,0.218419276384028,0.169732529954025,0,0,0,0,0,0,0.352675943690684,0,0.256916900385838,0,0.957803154342908,0.205116364240755,0.252071696221718,0.691572524642179,0.322951291263702,0,0.490738592505128,2.71330363699803,0,0.577628330751691,0,0,0.596748666348824,0.376051641746286,0.40341013740704,0,0,0.163771917510097,0.887136517302272,0.337687923091973,0,0.826747186004736,0.443910671357348,0,0.548257766857182,0,0,0.638812138197976,0,0.336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| ||
|short_description=p2@ERVMER34-1 | |short_description=p2@ERVMER34-1 | ||
}} | }} |
Latest revision as of 00:05, 18 September 2015
Short description: | p2@ERVMER34-1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ERVMER34-1_5end |
Coexpression cluster: | C1586_choriocarcinoma_serous_maxillary_colon_small_Prostate_H9 |
Association with transcript: | 0bp_to_ENST00000443173, NM_001242690, NM_024534_5end |
EntrezGene: | ERVMER34-1 |
HGNC: | 42970 |
UniProt: | Q9H9K5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.83e-20 | 253 |
embryonic stem cell | 4.91e-15 | 5 |
kidney cortical cell | 2.88e-10 | 12 |
renal cortical epithelial cell | 2.88e-10 | 12 |
epithelial cell of nephron | 3.22e-10 | 15 |
kidney cell | 7.45e-09 | 17 |
kidney epithelial cell | 7.45e-09 | 17 |
retinal pigment epithelial cell | 1.29e-08 | 3 |
duct epithelial cell | 3.81e-08 | 3 |
branched duct epithelial cell | 3.81e-08 | 3 |
tracheal epithelial cell | 3.81e-08 | 3 |
tracheoblast | 3.81e-08 | 3 |
epithelial cell of cervix | 5.58e-07 | 2 |
epithelial cell of large intestine | 9.61e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
cortex of kidney | 2.88e-10 | 12 |
renal parenchyma | 2.88e-10 | 12 |
nephron epithelium | 3.22e-10 | 15 |
renal tubule | 3.22e-10 | 15 |
nephron tubule | 3.22e-10 | 15 |
nephron | 3.22e-10 | 15 |
uriniferous tubule | 3.22e-10 | 15 |
nephrogenic mesenchyme | 3.22e-10 | 15 |
excretory tube | 1.71e-09 | 16 |
kidney epithelium | 1.71e-09 | 16 |
pigmented layer of retina | 1.29e-08 | 3 |
presumptive retinal pigmented epithelium | 1.29e-08 | 3 |
cortex | 5.32e-08 | 15 |
parenchyma | 5.32e-08 | 15 |
uterine epithelium | 5.58e-07 | 2 |
cervix epithelium | 5.58e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 7.61e-09 | 14 |
carcinoma | 9.86e-09 | 106 |
cell type cancer | 3.56e-07 | 143 |