FFCP PHASE1:Hg19::chr19:34855909..34855920,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2821 | |EntrezGene=2821 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4458 | |HGNC=4458 | ||
|TSSclassifier=strong | |||
|UniProt=P06744 | |UniProt=P06744 | ||
|association_with_transcript=-111bp_to_ENST00000356487,NM_000175_5end | |association_with_transcript=-111bp_to_ENST00000356487,NM_000175_5end | ||
|cluster_id=chr19:34855909..34855920,+ | |||
|description=CAGE_peak_8_at_GPI_5end | |description=CAGE_peak_8_at_GPI_5end | ||
|id=chr19:34855909..34855920,+ | |id=chr19:34855909..34855920,+ | ||
|ontology_enrichment_celltype=CL:1000449!1.72e-07!16;CL:1000497!4.66e-07!18;CL:0002518!4.66e-07!18 | |ontology_enrichment_celltype=CL:1000449!1.72e-07!16;CL:1000497!4.66e-07!18;CL:0002518!4.66e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:1000449;1.61e-14;15!CL:1000497;1.35e-12;17!CL:0002518;1.35e-12;17!CL:0002681;3.58e-11;12!CL:0002584;3.58e-11;12!CL:1000507;3.11e-10;10!CL:1000494;3.11e-10;10!CL:1000746;6.82e-07;7!CL:1000612;6.82e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:1000449,8.00e-15,15;CL:1000497,7.33e-13,17;CL:0002518,7.33e-13,17;CL:0002681,2.38e-11,12;CL:0002584,2.38e-11,12;CL:1000507,1.50e-10,10;CL:1000494,1.50e-10,10;CL:1000746,5.08e-07,7;CL:1000612,5.08e-07,7;CL:0002536,7.47e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!8.38e-12!194;UBERON:0000064!5.00e-10!219;UBERON:0000483!1.10e-09!309;UBERON:0000119!1.66e-09!312;UBERON:0001049!3.78e-09!57;UBERON:0005068!3.78e-09!57;UBERON:0006241!3.78e-09!57;UBERON:0007135!3.78e-09!57;UBERON:0004111!7.83e-09!241;UBERON:0005743!2.16e-08!86;UBERON:0003075!2.21e-08!86;UBERON:0007284!2.21e-08!86;UBERON:0007023!2.31e-08!115;UBERON:0000477!2.34e-08!286;UBERON:0001017!4.74e-08!82;UBERON:0000073!7.09e-08!94;UBERON:0001016!7.09e-08!94;UBERON:0003103!8.01e-08!69;UBERON:0006555!1.18e-07!17;UBERON:0005103!1.18e-07!17;UBERON:0000083!1.18e-07!17;UBERON:0009201!1.18e-07!17;UBERON:0004819!1.18e-07!17;UBERON:0006553!1.18e-07!17;UBERON:0003074!1.18e-07!17;UBERON:0003060!1.18e-07!17;UBERON:0000489!1.19e-07!32;UBERON:0000955!1.68e-07!69;UBERON:0006238!1.68e-07!69;UBERON:0004211!1.72e-07!16;UBERON:0001285!1.72e-07!16;UBERON:0007684!1.72e-07!16;UBERON:0003220!1.72e-07!16;UBERON:0004208!1.72e-07!16;UBERON:0002113!1.84e-07!27;UBERON:0003918!1.84e-07!27;UBERON:0005095!1.84e-07!27;UBERON:0007687!1.84e-07!27;UBERON:0002616!2.21e-07!59;UBERON:0002346!3.17e-07!90;UBERON:0001950!4.68e-07!20;UBERON:0000475!8.18e-07!365;UBERON:0000080!9.08e-07!18;UBERON:0002120!9.08e-07!18;UBERON:0004875!9.08e-07!18;UBERON:0005721!9.08e-07!18;UBERON:0005754!9.08e-07!18;UBERON:0007297!9.08e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;1.61e-14;15!UBERON:0004819;1.61e-14;15!UBERON:0001285;1.61e-14;15!UBERON:0007684;1.61e-14;15!UBERON:0000353;1.70e-11;15!UBERON:0001225;3.58e-11;12!UBERON:0008987;3.58e-11;12!UBERON:0002113;2.29e-10;24!UBERON:0011143;2.29e-10;24!UBERON:0004211;3.11e-10;10!UBERON:0009773;3.11e-10;10!UBERON:0001231;3.11e-10;10!UBERON:0004810;3.11e-10;10!UBERON:0001851;1.02e-08;15!UBERON:0000489;3.17e-08;29!UBERON:0006554;6.95e-08;30!UBERON:0001008;6.95e-08;30!UBERON:0003103;1.94e-07;61!UBERON:0000074;6.82e-07;7!UBERON:0001229;6.82e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,8.00e-15,15;UBERON:0009773,8.00e-15,15;UBERON:0001231,8.00e-15,15;UBERON:0001285,8.00e-15,15;UBERON:0007684,8.00e-15,15;UBERON:0004208,8.00e-15,15;UBERON:0006555,8.83e-14,16;UBERON:0004819,8.83e-14,16;UBERON:0003103,4.33e-12,68;UBERON:0000353,1.10e-11,15;UBERON:0001225,2.38e-11,12;UBERON:0008987,2.38e-11,12;UBERON:0004810,1.50e-10,10;UBERON:0002113,1.70e-09,26;UBERON:0003918,1.70e-09,26;UBERON:0011143,1.70e-09,26;UBERON:0005095,1.70e-09,26;UBERON:0007687,1.70e-09,26;UBERON:0001851,7.38e-09,15;UBERON:0000025,8.18e-09,192;UBERON:0000489,1.23e-07,31;UBERON:0003914,1.64e-07,117;UBERON:0010532,5.08e-07,7;UBERON:0000074,5.08e-07,7;UBERON:0001229,5.08e-07,7;UBERON:0001230,5.08e-07,7;UBERON:0003220,5.08e-07,7;UBERON:0005749,5.08e-07,7;UBERON:0004199,5.08e-07,7;UBERON:0004209,5.08e-07,7;UBERON:0004198,5.08e-07,7 | |||
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|phase1_expression=0.363356758541113,0.214100523890983,0,0,0.446961094427288,1.74467704820074,0,0,0,0,2.09340350391728,1.52908960491121,1.31883489114227,0.247532705920093,0,0,0,1.46062018077475,0.975865597581014,0.861847406537515,0.612002073732759,0.313454721478088,0.572471974262113,0.136874425072884,0.251085279189606,0.229240217243854,0.0821005894499457,0.393553906568396,0.786728553697808,0,0.309632246632152,0.919421224478927,1.204823675113,1.10926203050036,0.387336002901508,0.568676929949686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39783335439818,0.182664153764634,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0.167186495390678,0,0,0,0.222820913770347,0,0.221533894583621,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0.506039384039006,0,0.651083453856419,0,0.301150238155546,0,0,0,0,0.403213486449465,0.267440195783507,0.434473211648397,0,0,0.767175371061182,0.361439152384566,0.50133791063589,0.144846518960824,0,0.486634870302636,0.283604451492204,0.443458794925128,0.175669571386252,0.327447688744282,0,0.370784442784429,0,0,0,0,0,0.371457501329565,0,0.860234595106124,1.38856200643038,0,0.838998872419812,0,0.626984899610432,0,0.35576626268671,0.33472061276467,0.402829317109147,0,0.24406205754817,0,0.81014194788176,0.267899184852239,0,0.225222960966644,0,0,0.366403487860815,0,0,0.436094052142534,0.496971951695318,0.12663051166458,0.132409180813219,0,0,1.12135520028461,2.1349799145941,0.74000264525148,0.311211035399766,0.404132016209064,0,0.454072282934794,0,0,0.624320153660641,0.570471821544449,0.298897361103602,0.587172493218824,0,0.280901613404497,0.408308342509787,0.368502951935304,0.206651562351531,0,0.247266929278557,0,0,1.0100166837244,0.250237039743928,0,0.438977620880838,0,0.600952235626387,0.226864366320042,0.358779271377724,0.213557388818567,0,0,0,0.772921620136887,0,0,0.194874010322397,0.252433774244115,0.368199594569197,0,0,0.604512589365842,0.67824236924195,0.193260853163297,0.545492241181669,0,0.487894824518382,0.132529768321485,1.16193942869518,0.518305275076852,0.252320850875628,0.36497735907583,0,0,0,0.464367928031979,0,0.354920400119532,0,0,0,0.217879444092406,0,0.134831308160164,0.196221465125346,0,0,2.80483547606892,0.4115740113314,2.94017422771084,0,0,0,0.882926198829301,0.491953754172454,0.514703430895577,0,0,0.100528972411631,0.277765335475589,0,0,0,0.695582429850461,0.587043471179108,0.433099343283221,0,0.951270761172991,0.790204397959275,0.858486162094873,0,0,0.148631162288728,0,0,0.425325291727159,0.0895585227028483,0.290633938513962,0.383382679165211,0,0.176096868026452,0.207328115540772,0.144119953416961,0.12624243342638,0.253991577168676,1.14596527667483,0,1.71072446022705,0.308482478109971,0,0.285826432630578,0.224262168690721,0,0.2933531432838,0,0,0,0,2.08014873822732,0,0,0.532844358032199,0.57191197463259,0.542621605391443,0,0.325736184293735,0,2.37585561880029,0,0,0.199945982364114,0,0,0,0.239624855491583,0,0,0,0,0.716243852959582,0.112085143993527,0.591092280605782,0.431255149719035,0,0.508189248444927,1.30139853857622,0,0.335032530668698,0,0,0,0,0.36807447515742,0,0,0.207970861530807,0.356857977594324,0.630809660135739,0.234282829985426,0.300946099727719,0,0,0,0.368738337083406,0.260650843404249,0.391602314925481,1.37257369524342,0,0,0.213455115606889,0.909382714338778,0,0.604780586659361,0.248107807818777,0.306923946576125,0.841980283299221,0,0.511707249066704,0.160853921143607,0,0,0,0,0,0.232420756919918,0.362578348774867,0.200506470303285,0,0.114814448164607,0,0.393373244878272,1.80479845162965,1.07821471946181,1.56869953835371,4.38417673959782,0.844413031143006,1.13733384070897,0.340187410553031,0.863663664408557,1.54227252690289,1.62567862526312,0.501689773854853,0.509752546090077,2.49322802678617,0.671624264166535,0,0.261435451024901,0,0.656029291399411,0.650756789328606,0.515205058238611,0.366277859273374,0.742585499285292,0.574265537996172,0.650060246036521,0,0.290012154876366,0,0,0,0.214840489736547,0.435050081742686,0.596586391912706,0.178064071293475,0.165284915360978,0.384380134730212,0.127612712494584,0.10115778085555,1.39453664789186,0.31481234683064,0,1.23213432070436,0,0,0.18532421910392,0,0,0,0.190630193923825,0,0,0.636406495851874,0,0.539617372749944,0.54907405947211,0.589062011728432,0.202182481573316,0,0.421258456238981,0.975267478179181,0,0,0,0.141405431953713,1.13008116620243,1.10273068709225,0,0,0,0,0.405820753925408,0.30982349809975,0.845086807596724,0.430234056612155,0.687743287091848,0.35667105148125,0.354761064070598,0,0.329294892959902,1.13841952129715,0.349934720244983,0.288666338176536,1.34060455107157,0,0.470719003883896,0,0,0.886860307073351,0.229723400206959,0,0,0,0,0,0,0,0,0.213648142254946,0.962479855263359,0,0.557409525377156,0.432807638929335,2.13425530045242,0.318852545457645,0,0.191505370132367,0.423347165447766,0,0.280797178113459,0,0.313359791546046,0,0,0,0,0,0.343505344755765,0.307240764308458,0.223676107892416,0.333698283423817,0,0,1.2308739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| ||
|short_description=p8@GPI | |short_description=p8@GPI | ||
}} | }} |
Latest revision as of 08:02, 17 September 2015
Short description: | p8@GPI |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_GPI_5end |
Coexpression cluster: | NA |
Association with transcript: | -111bp_to_ENST00000356487, NM_000175_5end |
EntrezGene: | GPI |
HGNC: | 4458 |
UniProt: | P06744 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 8.00e-15 | 15 |
kidney cell | 7.33e-13 | 17 |
kidney epithelial cell | 7.33e-13 | 17 |
kidney cortical cell | 2.38e-11 | 12 |
renal cortical epithelial cell | 2.38e-11 | 12 |
kidney tubule cell | 1.50e-10 | 10 |
nephron tubule epithelial cell | 1.50e-10 | 10 |
glomerular cell | 5.08e-07 | 7 |
kidney corpuscule cell | 5.08e-07 | 7 |
amniotic epithelial cell | 7.47e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
nephron epithelium | 8.00e-15 | 15 |
renal tubule | 8.00e-15 | 15 |
nephron tubule | 8.00e-15 | 15 |
nephron | 8.00e-15 | 15 |
uriniferous tubule | 8.00e-15 | 15 |
nephrogenic mesenchyme | 8.00e-15 | 15 |
excretory tube | 8.83e-14 | 16 |
kidney epithelium | 8.83e-14 | 16 |
compound organ | 4.33e-12 | 68 |
parenchyma | 1.10e-11 | 15 |
cortex of kidney | 2.38e-11 | 12 |
renal parenchyma | 2.38e-11 | 12 |
nephron tubule epithelium | 1.50e-10 | 10 |
kidney | 1.70e-09 | 26 |
kidney mesenchyme | 1.70e-09 | 26 |
upper urinary tract | 1.70e-09 | 26 |
kidney rudiment | 1.70e-09 | 26 |
kidney field | 1.70e-09 | 26 |
cortex | 7.38e-09 | 15 |
tube | 8.18e-09 | 192 |
cavitated compound organ | 1.23e-07 | 31 |
epithelial tube | 1.64e-07 | 117 |
primitive nephron | 5.08e-07 | 7 |
renal glomerulus | 5.08e-07 | 7 |
renal corpuscle | 5.08e-07 | 7 |
glomerular capsule | 5.08e-07 | 7 |
metanephric mesenchyme | 5.08e-07 | 7 |
glomerular tuft | 5.08e-07 | 7 |
S-shaped body | 5.08e-07 | 7 |
renal vesicle | 5.08e-07 | 7 |
comma-shaped body | 5.08e-07 | 7 |