FFCP PHASE1:Hg19::chr18:40857368..40857384,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6860 | |EntrezGene=6860 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11512 | |HGNC=11512 | ||
|TSSclassifier=strong | |||
|UniProt=F5GY31 | |UniProt=F5GY31 | ||
|association_with_transcript=-27bp_to_ENST00000442661_5end | |association_with_transcript=-27bp_to_ENST00000442661_5end | ||
|cluster_id=chr18:40857368..40857384,- | |||
|coexpression_cluster_id=C759 | |||
|description=CAGE_peak_6_at_SYT4_5end | |description=CAGE_peak_6_at_SYT4_5end | ||
|id=chr18:40857368..40857384,- | |id=chr18:40857368..40857384,- | ||
|ontology_enrichment_celltype=CL:0000047!4.19e-10!8;CL:0000540!4.15e-07!6;CL:0000031!4.15e-07!6;CL:0000404!4.15e-07!6 | |ontology_enrichment_celltype=CL:0000047!4.19e-10!8;CL:0000540!4.15e-07!6;CL:0000031!4.15e-07!6;CL:0000404!4.15e-07!6 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.74e-19;82!UBERON:0006215;2.92e-10;3 | |||
|ontology_enrichment_disease=DOID:169!2.03e-07!6 | |ontology_enrichment_disease=DOID:169!2.03e-07!6 | ||
|ontology_enrichment_disease_v019=DOID:169;1.68e-07;6!DOID:171;9.42e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:169,1.57e-07,6;DOID:171,8.99e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0001017!4.33e-72!82;UBERON:0000073!3.23e-71!94;UBERON:0001016!3.23e-71!94;UBERON:0005743!2.98e-70!86;UBERON:0001049!5.53e-68!57;UBERON:0005068!5.53e-68!57;UBERON:0006241!5.53e-68!57;UBERON:0007135!5.53e-68!57;UBERON:0002616!5.70e-57!59;UBERON:0000955!1.59e-55!69;UBERON:0006238!1.59e-55!69;UBERON:0002780!1.68e-54!41;UBERON:0001890!1.68e-54!41;UBERON:0006240!1.68e-54!41;UBERON:0003080!6.16e-53!42;UBERON:0007023!4.60e-50!115;UBERON:0003075!1.34e-47!86;UBERON:0007284!1.34e-47!86;UBERON:0002346!7.25e-47!90;UBERON:0001893!7.89e-43!34;UBERON:0002020!1.17e-42!34;UBERON:0003528!1.17e-42!34;UBERON:0002791!5.48e-41!33;UBERON:0001869!3.55e-40!32;UBERON:0002619!6.73e-37!22;UBERON:0000924!4.04e-35!173;UBERON:0006601!4.04e-35!173;UBERON:0004121!5.31e-35!169;UBERON:0003056!8.89e-35!61;UBERON:0001950!1.20e-33!20;UBERON:0000956!8.85e-32!25;UBERON:0000203!8.85e-32!25;UBERON:0000033!3.31e-27!123;UBERON:0000153!3.14e-25!129;UBERON:0007811!3.14e-25!129;UBERON:0000025!1.41e-15!194;UBERON:0003076!1.45e-15!15;UBERON:0003057!1.45e-15!15;UBERON:0001894!4.79e-13!7;UBERON:0006222!4.79e-13!7;UBERON:0002420!2.29e-12!9;UBERON:0007245!2.29e-12!9;UBERON:0010009!2.29e-12!9;UBERON:0010011!2.29e-12!9;UBERON:0000454!2.29e-12!9;UBERON:0002308!3.70e-12!9;UBERON:0000125!3.70e-12!9;UBERON:0000200!4.17e-12!6;UBERON:0004733!1.33e-11!12;UBERON:0002028!1.33e-11!12;UBERON:0007277!1.33e-11!12;UBERON:0001871!2.49e-11!7;UBERON:0004111!2.52e-11!241;UBERON:0004732!1.51e-10!13;UBERON:0002298!2.31e-10!8;UBERON:0001872!4.00e-10!5;UBERON:0002021!4.40e-10!5;UBERON:0000349!6.14e-10!5;UBERON:0009663!3.25e-09!7;UBERON:0003296!8.27e-09!4;UBERON:0010133!8.27e-09!4;UBERON:0000369!3.27e-08!4;UBERON:0002435!3.27e-08!4;UBERON:0000204!3.27e-08!4;UBERON:0010082!3.27e-08!4;UBERON:0000477!8.96e-08!286;UBERON:0000483!1.44e-07!309;UBERON:0002680!1.61e-07!9;UBERON:0001895!1.61e-07!9;UBERON:0010092!1.61e-07!9;UBERON:0000119!2.36e-07!312;UBERON:0000064!3.96e-07!219 | |ontology_enrichment_uberon=UBERON:0001017!4.33e-72!82;UBERON:0000073!3.23e-71!94;UBERON:0001016!3.23e-71!94;UBERON:0005743!2.98e-70!86;UBERON:0001049!5.53e-68!57;UBERON:0005068!5.53e-68!57;UBERON:0006241!5.53e-68!57;UBERON:0007135!5.53e-68!57;UBERON:0002616!5.70e-57!59;UBERON:0000955!1.59e-55!69;UBERON:0006238!1.59e-55!69;UBERON:0002780!1.68e-54!41;UBERON:0001890!1.68e-54!41;UBERON:0006240!1.68e-54!41;UBERON:0003080!6.16e-53!42;UBERON:0007023!4.60e-50!115;UBERON:0003075!1.34e-47!86;UBERON:0007284!1.34e-47!86;UBERON:0002346!7.25e-47!90;UBERON:0001893!7.89e-43!34;UBERON:0002020!1.17e-42!34;UBERON:0003528!1.17e-42!34;UBERON:0002791!5.48e-41!33;UBERON:0001869!3.55e-40!32;UBERON:0002619!6.73e-37!22;UBERON:0000924!4.04e-35!173;UBERON:0006601!4.04e-35!173;UBERON:0004121!5.31e-35!169;UBERON:0003056!8.89e-35!61;UBERON:0001950!1.20e-33!20;UBERON:0000956!8.85e-32!25;UBERON:0000203!8.85e-32!25;UBERON:0000033!3.31e-27!123;UBERON:0000153!3.14e-25!129;UBERON:0007811!3.14e-25!129;UBERON:0000025!1.41e-15!194;UBERON:0003076!1.45e-15!15;UBERON:0003057!1.45e-15!15;UBERON:0001894!4.79e-13!7;UBERON:0006222!4.79e-13!7;UBERON:0002420!2.29e-12!9;UBERON:0007245!2.29e-12!9;UBERON:0010009!2.29e-12!9;UBERON:0010011!2.29e-12!9;UBERON:0000454!2.29e-12!9;UBERON:0002308!3.70e-12!9;UBERON:0000125!3.70e-12!9;UBERON:0000200!4.17e-12!6;UBERON:0004733!1.33e-11!12;UBERON:0002028!1.33e-11!12;UBERON:0007277!1.33e-11!12;UBERON:0001871!2.49e-11!7;UBERON:0004111!2.52e-11!241;UBERON:0004732!1.51e-10!13;UBERON:0002298!2.31e-10!8;UBERON:0001872!4.00e-10!5;UBERON:0002021!4.40e-10!5;UBERON:0000349!6.14e-10!5;UBERON:0009663!3.25e-09!7;UBERON:0003296!8.27e-09!4;UBERON:0010133!8.27e-09!4;UBERON:0000369!3.27e-08!4;UBERON:0002435!3.27e-08!4;UBERON:0000204!3.27e-08!4;UBERON:0010082!3.27e-08!4;UBERON:0000477!8.96e-08!286;UBERON:0000483!1.44e-07!309;UBERON:0002680!1.61e-07!9;UBERON:0001895!1.61e-07!9;UBERON:0010092!1.61e-07!9;UBERON:0000119!2.36e-07!312;UBERON:0000064!3.96e-07!219 | ||
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|short_description=p6@SYT4 | |short_description=p6@SYT4 | ||
}} | }} |
Latest revision as of 13:47, 19 September 2015
Short description: | p6@SYT4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SYT4_5end |
Coexpression cluster: | C759_nonsmall_gastrointestinal_occipital_pineal_cerebellum_small_argyrophil |
Association with transcript: | -27bp_to_ENST00000442661_5end |
EntrezGene: | SYT4 |
HGNC: | 11512 |
UniProt: | F5GY31 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 1.57e-07 | 6 |
neuroectodermal tumor | 8.99e-07 | 10 |