FFCP PHASE1:Hg19::chr21:39628852..39628867,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3772 | |EntrezGene=3772 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6261 | |HGNC=6261 | ||
|TSSclassifier=strong | |||
|UniProt=Q99712 | |UniProt=Q99712 | ||
|association_with_transcript=-2bp_to_ENST00000398938,NM_170736,uc002yww.2_5end | |association_with_transcript=-2bp_to_ENST00000398938,NM_170736,uc002yww.2_5end | ||
|cluster_id=chr21:39628852..39628867,+ | |||
|coexpression_cluster_id=C1487 | |||
|description=CAGE_peak_12_at_KCNJ15_5end | |description=CAGE_peak_12_at_KCNJ15_5end | ||
|id=chr21:39628852..39628867,+ | |id=chr21:39628852..39628867,+ | ||
|ontology_enrichment_celltype=CL:0002076!1.59e-12!43;CL:1000507!3.06e-12!12;CL:1000494!3.06e-12!12;CL:1000497!3.29e-09!18;CL:0002518!3.29e-09!18;CL:0002368!6.70e-09!13;CL:1000449!1.23e-08!16;CL:0000223!1.59e-08!59;CL:0000188!3.95e-07!9;CL:0000035!4.75e-07!20 | |ontology_enrichment_celltype=CL:0002076!1.59e-12!43;CL:1000507!3.06e-12!12;CL:1000494!3.06e-12!12;CL:1000497!3.29e-09!18;CL:0002518!3.29e-09!18;CL:0002368!6.70e-09!13;CL:1000449!1.23e-08!16;CL:0000223!1.59e-08!59;CL:0000188!3.95e-07!9;CL:0000035!4.75e-07!20 | ||
|ontology_enrichment_celltype_v019=CL:1000507;3.38e-23;10!CL:1000494;3.38e-23;10!CL:1000449;3.71e-15;15!CL:1000497;2.91e-13;17!CL:0002518;2.91e-13;17!CL:0002681;7.15e-10;12!CL:0002584;7.15e-10;12!CL:0000188;5.85e-09;9!CL:0000239;4.26e-07;3!CL:1000615;4.26e-07;3!CL:0002306;4.26e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,3.94e-23,10;CL:1000494,3.94e-23,10;CL:1000449,4.11e-15,15;CL:1000497,3.18e-13,17;CL:0002518,3.18e-13,17;CL:0002681,7.73e-10,12;CL:0002584,7.73e-10,12;CL:0000188,5.12e-09,9;CL:0000239,4.83e-07,3;CL:1000615,4.83e-07,3;CL:0002306,4.83e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0007297;7.00e-11;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001008!9.81e-22!45;UBERON:0006554!1.59e-20!44;UBERON:0003064!1.91e-15!37;UBERON:0000489!9.60e-14!32;UBERON:0000161!4.29e-13!35;UBERON:0002113!4.49e-13!27;UBERON:0003918!4.49e-13!27;UBERON:0005095!4.49e-13!27;UBERON:0007687!4.49e-13!27;UBERON:0009773!3.06e-12!12;UBERON:0001231!3.06e-12!12;UBERON:0004810!3.06e-12!12;UBERON:0004119!7.09e-12!169;UBERON:0000925!7.09e-12!169;UBERON:0006595!7.09e-12!169;UBERON:0004876!7.42e-12!20;UBERON:0000080!1.93e-11!18;UBERON:0002120!1.93e-11!18;UBERON:0004875!1.93e-11!18;UBERON:0005721!1.93e-11!18;UBERON:0005754!1.93e-11!18;UBERON:0007297!1.93e-11!18;UBERON:0000464!1.75e-10!104;UBERON:0000058!3.16e-10!26;UBERON:0003104!4.80e-10!238;UBERON:0009142!4.80e-10!238;UBERON:0006555!5.98e-10!17;UBERON:0005103!5.98e-10!17;UBERON:0000083!5.98e-10!17;UBERON:0009201!5.98e-10!17;UBERON:0004819!5.98e-10!17;UBERON:0006553!5.98e-10!17;UBERON:0003074!5.98e-10!17;UBERON:0003060!5.98e-10!17;UBERON:0003887!2.16e-09!21;UBERON:0001004!3.46e-09!72;UBERON:0001007!6.16e-09!155;UBERON:0001555!6.16e-09!155;UBERON:0007026!6.16e-09!155;UBERON:0004211!1.23e-08!16;UBERON:0001285!1.23e-08!16;UBERON:0007684!1.23e-08!16;UBERON:0003220!1.23e-08!16;UBERON:0004208!1.23e-08!16;UBERON:0000466!1.81e-08!126;UBERON:0005177!2.10e-08!107;UBERON:0003103!1.27e-07!69;UBERON:0000166!1.29e-07!21;UBERON:0002553!2.54e-07!70;UBERON:0006947!3.60e-07!3;UBERON:0004054!3.60e-07!3;UBERON:0002100!3.83e-07!216;UBERON:0000162!5.17e-07!14;UBERON:0001353!5.17e-07!14;UBERON:0000163!5.17e-07!14;UBERON:0006866!5.17e-07!14;UBERON:0000164!5.17e-07!14;UBERON:0000931!5.17e-07!14;UBERON:0000475!9.79e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;3.38e-23;10!UBERON:0009773;3.38e-23;10!UBERON:0001231;3.38e-23;10!UBERON:0004810;3.38e-23;10!UBERON:0006554;1.31e-17;30!UBERON:0001008;1.31e-17;30!UBERON:0006947;9.35e-16;3!UBERON:0004054;9.35e-16;3!UBERON:0006555;3.71e-15;15!UBERON:0004819;3.71e-15;15!UBERON:0001285;3.71e-15;15!UBERON:0007684;3.71e-15;15!UBERON:0000489;3.72e-15;29!UBERON:0002113;3.80e-15;24!UBERON:0011143;3.80e-15;24!UBERON:0005904;6.13e-12;4!UBERON:0001829;7.91e-11;2!UBERON:0001225;7.15e-10;12!UBERON:0008987;7.15e-10;12!UBERON:0000058;4.73e-08;10!UBERON:0001044;6.56e-08;6!UBERON:0003293;6.56e-08;6!UBERON:0003294;6.56e-08;6!UBERON:0010047;6.56e-08;6!UBERON:0003408;6.56e-08;6!UBERON:0000167;6.56e-08;6!UBERON:0001851;7.66e-08;15!UBERON:0000353;7.66e-08;15!UBERON:0006853;4.26e-07;3!UBERON:0007685;4.26e-07;3!UBERON:0004134;4.26e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,3.94e-23,10;UBERON:0002113,9.24e-21,26;UBERON:0003918,9.24e-21,26;UBERON:0011143,9.24e-21,26;UBERON:0005095,9.24e-21,26;UBERON:0007687,9.24e-21,26;UBERON:0000489,2.29e-20,31;UBERON:0006555,3.18e-18,16;UBERON:0004819,3.18e-18,16;UBERON:0006947,9.38e-16,3;UBERON:0004054,9.38e-16,3;UBERON:0004211,4.11e-15,15;UBERON:0009773,4.11e-15,15;UBERON:0001231,4.11e-15,15;UBERON:0001285,4.11e-15,15;UBERON:0007684,4.11e-15,15;UBERON:0004208,4.11e-15,15;UBERON:0006554,7.42e-15,47;UBERON:0001008,1.73e-14,48;UBERON:0005904,6.15e-12,4;UBERON:0001829,5.48e-11,2;UBERON:0005172,1.21e-10,54;UBERON:0005173,1.21e-10,54;UBERON:0001225,7.73e-10,12;UBERON:0008987,7.73e-10,12;UBERON:0002417,2.46e-09,60;UBERON:0000916,2.46e-09,60;UBERON:0005177,6.67e-09,101;UBERON:0001044,5.24e-08,6;UBERON:0003293,5.24e-08,6;UBERON:0003294,5.24e-08,6;UBERON:0010047,5.24e-08,6;UBERON:0000167,5.24e-08,6;UBERON:0003103,6.01e-08,68;UBERON:0001851,8.15e-08,15;UBERON:0000353,8.15e-08,15;UBERON:0006853,4.83e-07,3;UBERON:0007685,4.83e-07,3;UBERON:0004134,4.83e-07,3 | |||
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| ||
|short_description=p12@KCNJ15 | |short_description=p12@KCNJ15 | ||
}} | }} |
Latest revision as of 09:42, 18 September 2015
Short description: | p12@KCNJ15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_KCNJ15_5end |
Coexpression cluster: | C1487_Renal_lung_kidney_ductus_seminal_Skeletal_Urothelial |
Association with transcript: | -2bp_to_ENST00000398938, NM_170736, uc002yww.2_5end |
EntrezGene: | KCNJ15 |
HGNC: | 6261 |
UniProt: | Q99712 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 3.94e-23 | 10 |
nephron tubule epithelial cell | 3.94e-23 | 10 |
epithelial cell of nephron | 4.11e-15 | 15 |
kidney cell | 3.18e-13 | 17 |
kidney epithelial cell | 3.18e-13 | 17 |
kidney cortical cell | 7.73e-10 | 12 |
renal cortical epithelial cell | 7.73e-10 | 12 |
cell of skeletal muscle | 5.12e-09 | 9 |
brush border epithelial cell | 4.83e-07 | 3 |
kidney cortex tubule cell | 4.83e-07 | 3 |
epithelial cell of proximal tubule | 4.83e-07 | 3 |