FFCP PHASE1:Hg19::chr15:39881200..39881244,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:39881200..39881244,- | |||
|coexpression_cluster_id=C142 | |||
|description=CAGE_peak_at_chr15:39881200..39881244,- | |description=CAGE_peak_at_chr15:39881200..39881244,- | ||
|id=chr15:39881200..39881244,- | |id=chr15:39881200..39881244,- | ||
|ontology_enrichment_celltype=CL:0002371!4.35e-17!591;CL:0000144!1.47e-14!625;CL:0000055!4.37e-14!180;CL:0000057!5.68e-14!75;CL:0000548!1.18e-13!679;CL:0000004!1.18e-13!679;CL:0000255!1.18e-13!679;CL:0000012!3.46e-13!682;CL:0000222!5.34e-09!119;CL:0002334!9.01e-09!12;CL:0000220!3.17e-08!246;CL:0002139!6.33e-08!24;CL:0002321!6.39e-08!248;CL:0000115!6.85e-08!35;CL:0000003!1.35e-07!722;CL:0000063!2.20e-07!578;CL:0002078!8.97e-07!44;CL:0000723!9.96e-07!436 | |ontology_enrichment_celltype=CL:0002371!4.35e-17!591;CL:0000144!1.47e-14!625;CL:0000055!4.37e-14!180;CL:0000057!5.68e-14!75;CL:0000548!1.18e-13!679;CL:0000004!1.18e-13!679;CL:0000255!1.18e-13!679;CL:0000012!3.46e-13!682;CL:0000222!5.34e-09!119;CL:0002334!9.01e-09!12;CL:0000220!3.17e-08!246;CL:0002139!6.33e-08!24;CL:0002321!6.39e-08!248;CL:0000115!6.85e-08!35;CL:0000003!1.35e-07!722;CL:0000063!2.20e-07!578;CL:0002078!8.97e-07!44;CL:0000723!9.96e-07!436 | ||
|ontology_enrichment_celltype_v019=CL:0000115;1.18e-12;36!CL:0002139;2.49e-12;24!CL:0002334;4.98e-09;12!CL:0000071;2.21e-08;18!CL:0002078;3.77e-08;45!CL:0002559;3.91e-08;5!CL:0002620;5.13e-08;23!CL:0000349;1.84e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.47e-16,76;CL:0000115,1.45e-14,36;CL:0002139,3.71e-12,24;CL:0002078,2.69e-11,45;CL:0002334,4.76e-09,12;CL:0000213,7.44e-09,58;CL:0000215,7.44e-09,58;CL:0000071,2.42e-08,18;CL:0002546,2.42e-08,18;CL:0002559,3.71e-08,5;CL:0002620,5.46e-08,23;CL:0000349,2.19e-07,19;CL:0000222,3.09e-07,121 | |||
|ontology_enrichment_development_v019=CL:0002546;2.21e-08;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;1.06e-07;5!DOID:450;1.06e-07;5!DOID:66;1.06e-07;5!DOID:423;1.06e-07;5!DOID:0080000;1.06e-07;5!DOID:11722;1.06e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.30e-07,5;DOID:450,1.30e-07,5;DOID:66,1.30e-07,5;DOID:423,1.30e-07,5;DOID:0080000,1.30e-07,5;DOID:11722,1.30e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0004872!2.14e-12!84;UBERON:0000055!7.50e-12!69;UBERON:0002049!2.14e-11!79;UBERON:0007798!2.14e-11!79;UBERON:0001981!3.15e-11!60;UBERON:0007500!3.15e-11!60;UBERON:0004537!3.15e-11!60;UBERON:0006965!3.15e-11!60;UBERON:0003914!3.70e-11!118;UBERON:0004535!1.64e-09!110;UBERON:0001009!4.15e-09!113;UBERON:0000468!6.40e-09!659;UBERON:0003102!1.73e-08!95;UBERON:0000490!1.99e-08!138;UBERON:0005256!5.34e-08!143;UBERON:0000467!8.16e-08!625;UBERON:0000480!1.07e-07!626;UBERON:0001637!1.66e-07!42;UBERON:0003509!1.66e-07!42;UBERON:0004572!1.66e-07!42;UBERON:0000486!1.73e-07!82;UBERON:0000926!2.53e-07!448;UBERON:0004120!2.53e-07!448;UBERON:0006603!2.53e-07!448;UBERON:0004923!3.84e-07!57;UBERON:0002100!5.59e-07!216;UBERON:0000914!6.20e-07!83;UBERON:0002329!6.20e-07!83;UBERON:0003077!6.20e-07!83;UBERON:0003059!6.20e-07!83;UBERON:0007282!6.20e-07!83;UBERON:0009618!6.20e-07!83;UBERON:0007285!6.20e-07!83;UBERON:0005631!8.23e-07!14;UBERON:0000158!8.23e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;1.64e-09;41!UBERON:0002199;2.02e-09;46!UBERON:0002416;2.02e-09;46!UBERON:0003688;1.59e-08;6!UBERON:0002358;1.59e-08;6!UBERON:0003684;1.59e-08;6!UBERON:0001178;1.59e-08;6!UBERON:0004638;2.21e-08;18!UBERON:0001986;2.21e-08;18!UBERON:0004852;2.21e-08;18!UBERON:0002073;3.91e-08;5!UBERON:0004573;2.79e-07;33!UBERON:0004571;2.79e-07;33!UBERON:0007500;4.81e-07;56!UBERON:0001981;4.81e-07;56!UBERON:0004537;4.81e-07;56!UBERON:0000055;5.07e-07;65!UBERON:0001637;5.46e-07;42!UBERON:0003509;5.46e-07;42!UBERON:0004572;5.46e-07;42!UBERON:0003102;5.47e-07;50!UBERON:0004457;5.94e-07;9!UBERON:0000042;5.94e-07;9!UBERON:0000305;7.17e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,6.68e-13,68;UBERON:0002199,1.03e-12,46;UBERON:0002416,1.03e-12,46;UBERON:0002097,3.69e-11,41;UBERON:0002049,8.40e-11,78;UBERON:0007798,8.40e-11,78;UBERON:0007500,8.69e-11,59;UBERON:0001981,8.69e-11,59;UBERON:0004537,8.69e-11,59;UBERON:0006965,8.69e-11,59;UBERON:0004872,9.14e-10,83;UBERON:0003102,3.59e-09,99;UBERON:0004923,1.36e-08,66;UBERON:0003688,1.57e-08,6;UBERON:0002358,1.57e-08,6;UBERON:0003684,1.57e-08,6;UBERON:0001178,1.57e-08,6;UBERON:0004638,2.42e-08,18;UBERON:0001986,2.42e-08,18;UBERON:0004852,2.42e-08,18;UBERON:0002073,3.71e-08,5;UBERON:0005086,3.71e-08,5;UBERON:0001637,8.46e-08,42;UBERON:0003509,8.46e-08,42;UBERON:0004572,8.46e-08,42;UBERON:0004535,1.10e-07,109;UBERON:0005631,1.18e-07,14;UBERON:0000158,1.18e-07,14;UBERON:0004573,1.53e-07,33;UBERON:0004571,1.53e-07,33;UBERON:0001009,3.13e-07,112;UBERON:0003914,5.10e-07,117;UBERON:0000305,6.66e-07,7 | |||
|phase1_expression=10.5373459976923,8.13581990785736,2.25527046553554,17.0124607200322,2.23480547213644,9.59572376510406,2.53299878168311,0,0,0.245733936501509,1.39560233594486,3.49506195408276,1.84636884759917,0.37129905888014,1.65698687863958,1.34465029290355,1.80808358407193,3.65155045193687,1.95173119516203,0,0.408001382488506,0.313454721478088,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,2.20598892217156,0,0,0,0,0.145398238779565,0,0,0.697287110717054,0,0.309706370895104,1.43846196161075,0,0.236482229888585,1.37898272294647,0,0,1.31769637679823,0,0,2.44867113896722,0,0,0.659702600373432,0,0.426224750532694,4.35313857942876,0,0,0.502497330513487,0.521482918420201,0,6.65939452896706,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,3.58015173161885,1.80719576192283,0.50133791063589,1.30361867064741,0,0.973269740605272,0.0945348171640679,0.221729397462564,0.175669571386252,0.130979075497713,0.364295288292542,0,0,0,0,0,0,0,0,0,1.73570250803797,1.13061588384802,2.51699661725944,9.35401342596229,0.417989933073621,1.29208379584664,0,1.00416183829401,5.63961043952806,1.52054421143703,5.85748938115607,2.94130464276695,12.9622711661082,1.69669483739752,0.673588117878509,1.12611480483322,0,0,1.09921046358244,0,0,0.436094052142534,14.4121865991642,2.27934920996244,1.72131935057184,1.72101972449288,0.354668382198357,0,0,9.12669929143492,0.311211035399766,0.134710672069688,1.79808093424805,0,0.576175924479999,0,0,0,0.448346041655403,0,0,0,0.204154171254893,0.737005903870608,0.206651562351531,2.37600571456411,9.39614331258516,0,0,0.168336113954066,0,0,2.19488810440419,10.7270728529657,4.6573798261045,2.83580457900053,13.9923915837312,3.41691822109708,4.02670612203168,5.70173082560364,1.23663035086127,8.24449728146013,2.60563598864226,3.03797398034279,1.65642908774038,6.31084435610286,2.76149695926898,0.323292113637624,8.16522062788213,0.806016785821122,2.03472710772585,0.773043412653187,1.63647672354501,0.573609190778008,0,0,0,0,0,0,3.12899064659632,23.1566737749439,2.76269842704961,7.42988684851167,5.0531563716871,0.236613600079688,0,0.482022059766964,0,0,0,0,0.196221465125346,0.38474715694639,1.4763109092493,1.40241773803446,0.8231480226628,0,0,0,0,0,0,0.343135620597051,1.42675371031213,1.1240175325762,1.10581869652794,0.925884451585296,0,0,0,0,0.234817388471643,2.45422961193825,5.55582615091933,6.84914948044554,0,0,0,0,0,0,1.6798212819886,0.567100388969546,3.22410681730254,1.74380363108377,0,0,0,0,0,0,0,0,0,1.71072446022705,0.308482478109971,0,0,0,0,0.07333828582095,0.517086863031111,0,0.845302752556,3.19125739901845,7.28052058379563,0.771622122786426,0,0.266422179016099,0.285955987316295,0,0.823240336780769,0.325736184293735,0.355391948742546,0,0,0,0,0,0,0,2.39624855491583,1.14861935834114,0,0.579125226670317,0.61642896765115,0.358121926479791,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0.24538298343828,0.500170521059677,0,11.0224556611328,11.9547422494098,12.3007883726469,7.49705055953364,0,0,1.03473071292505,0,0.184369168541703,2.43274120510632,0,0,0.206768026122887,0,0.213455115606889,1.5156378572313,1.66435439510497,2.41912234663744,4.21783273291921,14.2719635157898,12.3490441550552,1.66580894032411,3.07024349440022,4.98647155545183,8.90508398669946,2.15893571323718,3.37367278094941,0.739144404124282,0.519254429183621,0.929683027679674,0,4.21063587636898,0,0.574072240823034,0.728364672026868,1.18011973463482,0,0,0,0,0.211103257785751,1.13733384070897,2.04112446331819,1.72732732881711,3.08454505380579,0,0.501689773854853,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0.290012154876366,0.154048617114644,0.15350367472613,0,0.107420244868274,0.725083469571143,0.170453254832202,0.623224249527161,0.826424576804891,1.53752053892085,0.893288987462089,0.10115778085555,0.464845549297286,4.09256050879832,0,0,0.532306030317022,0,1.11194531462352,0,0,0,1.14378116354295,0,0.42793898803392,0,0,1.07923474549989,0.54907405947211,0.824686816419805,0,0,0.842516912477962,1.95053495635836,1.70599442741899,2.11300293513511,0.136499911407986,0.989838023675989,0,0,6.6343897524122,3.5076070820301,0,0,0.811641507850816,0.92947049429925,0.563391205064483,0.717056761020258,1.27723753317057,0.7133421029625,0,1.26664581178598,0.658589785919804,0,0,0,0,0,0.0941438007767792,3.01353760869861,3.36942951335251,0.443430153536676,4.59446800413919,0,0,0,0,0,0,0,0,0,0.962479855263359,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,1.19372242368845,0.593929361665277,3.07160702099232,0,0,0.111308705022906,0,0,0,0,0,0.20453736500431,0,3.11039587661807,1.43789361835723,0,0,0.197286811273867,2.3948309234694,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0.173624994933292,0,0,0,0,0,0,0.10893846351899,0,0,0.341826167541004,0,0,0,0,0.732780747214898,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568679216656392,0,0,0,0.330991955875499,0,0,0,0.138674673013139,0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| ||
|short_description=p@chr15:39881200..39881244,- | |short_description=p@chr15:39881200..39881244,- | ||
}} | }} |
Latest revision as of 01:16, 25 July 2015
Short description: | p@chr15:39881200..39881244, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:39881200..39881244, - |
Coexpression cluster: | C142_Preadipocyte_Fibroblast_hepatic_Ewing_Adipocyte_Olfactory_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.47e-16 | 76 |
endothelial cell | 1.45e-14 | 36 |
endothelial cell of vascular tree | 3.71e-12 | 24 |
meso-epithelial cell | 2.69e-11 | 45 |
preadipocyte | 4.76e-09 | 12 |
lining cell | 7.44e-09 | 58 |
barrier cell | 7.44e-09 | 58 |
blood vessel endothelial cell | 2.42e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.42e-08 | 18 |
hair follicle cell | 3.71e-08 | 5 |
skin fibroblast | 5.46e-08 | 23 |
extraembryonic cell | 2.19e-07 | 19 |
mesodermal cell | 3.09e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
vessel | 6.68e-13 | 68 |
integument | 1.03e-12 | 46 |
integumental system | 1.03e-12 | 46 |
skin of body | 3.69e-11 | 41 |
vasculature | 8.40e-11 | 78 |
vascular system | 8.40e-11 | 78 |
epithelial tube open at both ends | 8.69e-11 | 59 |
blood vessel | 8.69e-11 | 59 |
blood vasculature | 8.69e-11 | 59 |
vascular cord | 8.69e-11 | 59 |
splanchnic layer of lateral plate mesoderm | 9.14e-10 | 83 |
surface structure | 3.59e-09 | 99 |
organ component layer | 1.36e-08 | 66 |
omentum | 1.57e-08 | 6 |
peritoneum | 1.57e-08 | 6 |
abdominal cavity | 1.57e-08 | 6 |
visceral peritoneum | 1.57e-08 | 6 |
blood vessel endothelium | 2.42e-08 | 18 |
endothelium | 2.42e-08 | 18 |
cardiovascular system endothelium | 2.42e-08 | 18 |
hair follicle | 3.71e-08 | 5 |
hair follicle placode | 3.71e-08 | 5 |
artery | 8.46e-08 | 42 |
arterial blood vessel | 8.46e-08 | 42 |
arterial system | 8.46e-08 | 42 |
cardiovascular system | 1.10e-07 | 109 |
extraembryonic membrane | 1.18e-07 | 14 |
membranous layer | 1.18e-07 | 14 |
systemic artery | 1.53e-07 | 33 |
systemic arterial system | 1.53e-07 | 33 |
circulatory system | 3.13e-07 | 112 |
epithelial tube | 5.10e-07 | 117 |
amnion | 6.66e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.30e-07 | 5 |
myotonic disease | 1.30e-07 | 5 |
muscle tissue disease | 1.30e-07 | 5 |
myopathy | 1.30e-07 | 5 |
muscular disease | 1.30e-07 | 5 |
myotonic dystrophy | 1.30e-07 | 5 |