FFCP PHASE1:Hg19::chr1:155290655..155290673,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23623 | |EntrezGene=23623 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17153 | |HGNC=17153 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-13bp_to_ENST00000368354_5end | |association_with_transcript=-13bp_to_ENST00000368354_5end | ||
|cluster_id=chr1:155290655..155290673,+ | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_8_at_RUSC1_5end | |description=CAGE_peak_8_at_RUSC1_5end | ||
|id=chr1:155290655..155290673,+ | |id=chr1:155290655..155290673,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000047;3.84e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,7.32e-10,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.14e-14;82!UBERON:0006215;1.89e-10;3!UBERON:0010122;1.14e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.30e-46!57;UBERON:0005068!1.30e-46!57;UBERON:0006241!1.30e-46!57;UBERON:0007135!1.30e-46!57;UBERON:0001017!1.91e-43!82;UBERON:0005743!1.04e-41!86;UBERON:0002616!3.41e-40!59;UBERON:0000073!2.16e-39!94;UBERON:0001016!2.16e-39!94;UBERON:0003075!1.38e-37!86;UBERON:0007284!1.38e-37!86;UBERON:0002346!2.29e-37!90;UBERON:0002780!6.69e-36!41;UBERON:0001890!6.69e-36!41;UBERON:0006240!6.69e-36!41;UBERON:0000955!7.28e-36!69;UBERON:0006238!7.28e-36!69;UBERON:0003080!1.14e-34!42;UBERON:0002020!2.58e-32!34;UBERON:0003528!2.58e-32!34;UBERON:0001893!4.56e-32!34;UBERON:0002791!5.15e-31!33;UBERON:0001869!1.00e-30!32;UBERON:0007023!3.96e-27!115;UBERON:0000153!9.82e-27!129;UBERON:0007811!9.82e-27!129;UBERON:0000924!2.94e-26!173;UBERON:0006601!2.94e-26!173;UBERON:0002619!5.02e-26!22;UBERON:0004121!6.25e-26!169;UBERON:0000033!8.42e-26!123;UBERON:0003056!3.57e-25!61;UBERON:0001950!6.89e-24!20;UBERON:0000956!8.52e-24!25;UBERON:0000203!8.52e-24!25;UBERON:0000025!9.47e-17!194;UBERON:0000475!5.36e-14!365;UBERON:0004732!4.93e-13!13;UBERON:0003076!1.03e-12!15;UBERON:0003057!1.03e-12!15;UBERON:0004733!3.85e-12!12;UBERON:0002028!3.85e-12!12;UBERON:0007277!3.85e-12!12;UBERON:0004111!4.02e-12!241;UBERON:0000064!4.34e-12!219;UBERON:0000477!4.95e-12!286;UBERON:0000483!7.74e-11!309;UBERON:0000119!1.86e-10!312;UBERON:0001871!5.44e-10!7;UBERON:0002420!6.22e-10!9;UBERON:0007245!6.22e-10!9;UBERON:0010009!6.22e-10!9;UBERON:0010011!6.22e-10!9;UBERON:0000454!6.22e-10!9;UBERON:0002308!6.63e-10!9;UBERON:0000125!6.63e-10!9;UBERON:0002680!1.16e-09!9;UBERON:0001895!1.16e-09!9;UBERON:0010092!1.16e-09!9;UBERON:0000468!3.31e-08!659;UBERON:0000481!5.11e-08!347;UBERON:0009663!7.38e-08!7;UBERON:0000200!7.61e-08!6;UBERON:0001872!4.66e-07!5;UBERON:0002021!5.12e-07!5;UBERON:0000349!8.20e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.09e-71;22!UBERON:0001869;2.32e-70;32!UBERON:0003528;1.31e-68;34!UBERON:0002020;1.31e-68;34!UBERON:0002791;6.24e-66;32!UBERON:0001950;1.37e-65;20!UBERON:0001893;9.40e-63;34!UBERON:0000956;1.15e-62;25!UBERON:0000203;1.15e-62;25!UBERON:0002780;4.54e-54;41!UBERON:0001890;4.54e-54;41!UBERON:0000073;1.71e-44;53!UBERON:0002616;1.71e-44;53!UBERON:0000955;4.15e-33;68!UBERON:0001017;5.34e-32;75!UBERON:0001016;1.96e-29;83!UBERON:0001871;1.81e-22;6!UBERON:0000200;2.29e-19;6!UBERON:0000125;2.09e-17;9!UBERON:0002308;2.09e-17;9!UBERON:0002420;2.36e-17;9!UBERON:0007245;2.36e-17;9!UBERON:0010009;2.36e-17;9!UBERON:0010011;2.36e-17;9!UBERON:0000454;2.36e-17;9!UBERON:0001872;3.01e-17;5!UBERON:0002021;3.33e-17;5!UBERON:0000349;2.17e-16;5!UBERON:0004732;1.97e-14;13!UBERON:0000369;1.17e-13;4!UBERON:0002435;1.17e-13;4!UBERON:0000204;1.17e-13;4!UBERON:0002680;1.35e-12;9!UBERON:0001895;1.35e-12;9!UBERON:0004733;2.87e-12;12!UBERON:0002028;2.87e-12;12!UBERON:0007023;3.35e-12;114!UBERON:0009663;6.63e-12;7!UBERON:0011216;8.03e-11;132!UBERON:0005383;9.55e-11;3!UBERON:0005382;9.55e-11;3!UBERON:0000988;1.61e-10;3!UBERON:0001870;3.01e-10;3!UBERON:0010314;8.88e-10;132!UBERON:0002298;1.02e-08;6!UBERON:0001873;1.14e-07;2!UBERON:0001954;1.22e-07;2!UBERON:0003022;1.22e-07;2!UBERON:0002421;1.22e-07;2!UBERON:0002600;1.22e-07;2!UBERON:0002771;1.37e-07;2!UBERON:0002148;1.37e-07;2!UBERON:0006331;1.37e-07;2!UBERON:0009662;1.37e-07;2!UBERON:0001876;1.61e-07;2!UBERON:0002702;1.72e-07;2!UBERON:0002784;2.90e-07;4!UBERON:0001905;5.68e-07;2!UBERON:0002757;5.68e-07;2!UBERON:0010134;5.68e-07;2!UBERON:0005408;5.68e-07;2!UBERON:0001899;5.68e-07;2!UBERON:0001894;6.03e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.06e-91,56;UBERON:0005068,1.06e-91,56;UBERON:0006241,1.06e-91,56;UBERON:0007135,1.06e-91,56;UBERON:0000073,3.89e-88,53;UBERON:0002616,3.89e-88,53;UBERON:0001017,9.17e-88,81;UBERON:0001016,2.56e-81,89;UBERON:0003528,3.73e-79,34;UBERON:0002020,3.73e-79,34;UBERON:0001869,1.08e-78,32;UBERON:0002780,9.81e-78,41;UBERON:0001890,9.81e-78,41;UBERON:0003080,9.81e-78,41;UBERON:0006240,9.81e-78,41;UBERON:0001893,9.91e-74,34;UBERON:0000955,2.76e-73,68;UBERON:0006238,2.76e-73,68;UBERON:0002791,3.81e-73,32;UBERON:0002619,5.80e-72,22;UBERON:0003075,8.18e-66,82;UBERON:0007284,8.18e-66,82;UBERON:0001950,9.02e-66,20;UBERON:0000956,6.59e-63,25;UBERON:0000203,6.59e-63,25;UBERON:0002346,2.82e-62,86;UBERON:0003056,6.62e-53,61;UBERON:0010371,1.07e-49,104;UBERON:0010314,4.44e-43,132;UBERON:0004121,4.36e-39,171;UBERON:0000924,4.36e-39,171;UBERON:0006601,4.36e-39,171;UBERON:0007023,8.65e-36,114;UBERON:0011216,5.19e-33,223;UBERON:0000025,8.68e-29,192;UBERON:0001871,1.27e-22,6;UBERON:0004111,1.02e-20,240;UBERON:0000200,1.59e-19,6;UBERON:0002420,1.71e-17,9;UBERON:0007245,1.71e-17,9;UBERON:0010009,1.71e-17,9;UBERON:0010011,1.71e-17,9;UBERON:0000454,1.71e-17,9;UBERON:0000125,1.99e-17,9;UBERON:0002308,1.99e-17,9;UBERON:0001872,2.78e-17,5;UBERON:0002021,3.62e-17,5;UBERON:0000349,1.38e-16,5;UBERON:0003076,1.65e-15,15;UBERON:0003057,1.65e-15,15;UBERON:0000483,1.26e-14,306;UBERON:0004732,2.09e-14,13;UBERON:0000119,2.26e-14,309;UBERON:0000369,1.06e-13,4;UBERON:0002435,1.06e-13,4;UBERON:0000204,1.06e-13,4;UBERON:0010082,1.06e-13,4;UBERON:0002680,1.70e-12,9;UBERON:0001895,1.70e-12,9;UBERON:0010092,1.70e-12,9;UBERON:0004733,3.06e-12,12;UBERON:0002028,3.06e-12,12;UBERON:0007277,3.06e-12,12;UBERON:0009663,6.20e-12,7;UBERON:0005383,7.98e-11,3;UBERON:0005382,7.98e-11,3;UBERON:0000988,1.92e-10,3;UBERON:0001870,2.65e-10,3;UBERON:0002298,9.77e-09,6;UBERON:0000923,7.14e-08,560;UBERON:0010316,7.14e-08,560;UBERON:0005291,7.14e-08,560;UBERON:0006598,7.14e-08,560;UBERON:0010317,7.14e-08,560;UBERON:0002532,7.14e-08,560;UBERON:0001873,9.55e-08,2;UBERON:0010122,9.55e-08,2;UBERON:0001954,9.87e-08,2;UBERON:0003022,9.87e-08,2;UBERON:0002421,9.87e-08,2;UBERON:0002600,9.87e-08,2;UBERON:0002050,1.01e-07,564;UBERON:0005423,1.06e-07,581;UBERON:0002771,1.13e-07,2;UBERON:0001876,1.16e-07,2;UBERON:0002148,1.42e-07,2;UBERON:0006331,1.42e-07,2;UBERON:0009662,1.42e-07,2;UBERON:0002702,1.67e-07,2;UBERON:0000922,2.61e-07,592;UBERON:0002784,3.04e-07,4;UBERON:0001905,6.74e-07,2;UBERON:0002757,6.74e-07,2;UBERON:0010134,6.74e-07,2;UBERON:0005408,6.74e-07,2;UBERON:0001899,6.74e-07,2;UBERON:0001894,6.95e-07,7;UBERON:0006222,6.95e-07,7 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,0,0.123766352960047,0.331397375727916,0,0,0,0,0.369363174230364,0.408001382488506,0.626909442956176,0,0.410623275218653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,0,0,0,0.289693037921647,0,0,0.283604451492204,0,0.175669571386252,0.916853528483988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0,0.311211035399766,0,0.163461903113459,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0.168336113954066,0,0,0.438977620880838,0,0.150238058906597,0.113432183160021,0.179389635688862,0,0,0.300091096084402,0.103052529238439,0.772921620136887,0.558350568994769,0,0.194874010322397,0.757301322732344,0.0920498986422993,0,1.77504796258307,0.302256294682921,0.169560592310488,0,0,0,0.243947412259191,0.397589304964456,0.116193942869518,0.518305275076852,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0.185176890317059,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0.063497894292169,0,1.17217447210047,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,1.41849132023278,0,0,0.542621605391443,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0.434343920002738,0,0,0,0,0,0,1.77866236955724,3.90419561572865,2.31986643833309,4.52293916402742,3.18969375826582,0,0,0,0.12269149171914,0,0.542530047399471,0,0,0,0.234282829985426,0,0,0,1.32845119707087,0,0.0868836144680828,0.391602314925481,0,0,0,0,0,0,0,0,0.306923946576125,0,0,0,0,0,0,0,0.164254312027618,0,0,0,0,0,0,0,0.131124414959424,0,0,0.784349769176855,1.46139224653261,0.316654886678627,0,0.170093705276516,0,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0.290012154876366,0,0.15350367472613,0,0.214840489736547,0,0,0.178064071293475,0,0,0,0,0.929691098594572,0.62962469366128,0,0.308033580176089,0,0,0,0,0,0,0,0.255897791311334,0,0.318203247925937,0,0,0,0,0.404364963146632,1.58510321173008,0,0,0,0,0.136499911407986,0,2.26016233240486,1.10273068709225,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0.422215270595328,0,0,0.699869440489966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.849523652246594,0,0,0,0.296964680832639,0,3.97659059106519,3.93874365949436,0,0,0.211125408127993,0.597743964753209,0,0,0,0,0.311039587661807,0,0,0,0.295930216910801,0,0,0.969332746095218,4.08179631912146,9.98068990005971,0,0,0,0,0,0,0,0,0,7.97167247232455,2.89431452700979,3.05163472634166,3.75969483766164,3.54657142744257,2.63262476584767,0,0,0.538651809526579,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.67401132980677,0,1.1713222286267,0,0,0,0,1.20990716048664,13.7732742733721,0.063186579628488,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0.171986032471617,0,0,0,0.0969890164884194,0.0882561266915003,0.451961481561065,0,0,2.72236422610278,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,5.4037825983881,0.273810757783986,0,0,0,0.558564802544508,0,0,0.199679000498991,0,0,0.0671834724867263,0,0,0,0,0,0,0,6.36183751847443,2.99647493445466,0,0.137539436597234,0.415440338029185,0,0,5.10296275927407,0,0.0788057072991982,0.104909176269996,0,0,0,0.714695326373367,0,0.25426853765475,0.542999601753713,0,0,0,0,0.511164065356265,0,0,0,5.42988416718512,2.24795422962573,0,0,0,0.314408610199332,0,0,0.592834895693833,0,0,0,0,0,0,0,2.65820453990096,5.97928698019619,4.38168257472749,0.573409195690071,0.887432412294818,1.98708489412427,0,0,0.151649117541648,0,0,0,0.28984205722165,0.149254802886874,0,0,0,0,0,0,0,0.15543720058278,0.147855149989634,0,0,0.465788870628778,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0.686791410365586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.76516872303461,0.194860308839388,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0.646948868380091,0,0.109209638192014,0,0.637724760305049,0.123935764259002,0,0,0,0.80057074828547,0.705351887381368,0,3.21146125482298,4.25089728976755,3.35231104020018,4.71767637753736,11.0911546337556,5.39426569220899,4.84426936895553,1.42769420259154,0,0,0,0.115525666150338,0,0,0,0.225630985047772,0,0,0,0,0,3.7821047386301,7.02970288752463,4.13373593002368,3.86836442182832,8.75159694429151,0,0,0,0,2.14280734351315,1.3451348888753,0.606965604236632,0,0,0,0,3.12660771693426,4.73563969652513,0,0,0,4.39923651764805,0,0,0,0,0.357382720883282,0,0.23248285073625,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0.971421986118279,0.233939463462106,0.397901550322736,2.14056163399623,0,0,0,0.154348316215889,0,0,0.245148321753905,0.471353094203252,1.76677620403451,0,2.113278637917,0.339854229375634,0,0,0,0,0,0,0,0,0.286679166302903,0.473314686579554,6.119234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| ||
|short_description=p8@RUSC1 | |short_description=p8@RUSC1 | ||
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Latest revision as of 12:28, 17 September 2015
Short description: | p8@RUSC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_RUSC1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -13bp_to_ENST00000368354_5end |
EntrezGene: | RUSC1 |
HGNC: | 17153 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 7.32e-10 | 8 |