FFCP PHASE1:Hg19::chr14:38064590..38064606,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3169 | |EntrezGene=3169 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5021 | |HGNC=5021 | ||
|TSSclassifier=strong | |||
|UniProt=P55317 | |UniProt=P55317 | ||
|association_with_transcript=-101bp_to_NM_004496,uc001wuf.2_5end | |association_with_transcript=-101bp_to_NM_004496,uc001wuf.2_5end | ||
|cluster_id=chr14:38064590..38064606,- | |||
|coexpression_cluster_id=C885 | |||
|description=CAGE_peak_2_at_FOXA1_5end | |description=CAGE_peak_2_at_FOXA1_5end | ||
|id=chr14:38064590..38064606,- | |id=chr14:38064590..38064606,- | ||
|ontology_enrichment_celltype=CL:0000066!2.03e-26!254;CL:0000223!3.41e-09!59;CL:0000181!5.77e-07!12;CL:0000417!5.77e-07!12;CL:0000668!5.77e-07!12;CL:0000414!5.77e-07!12;CL:0000412!5.77e-07!12;CL:0000182!5.77e-07!12 | |ontology_enrichment_celltype=CL:0000066!2.03e-26!254;CL:0000223!3.41e-09!59;CL:0000181!5.77e-07!12;CL:0000417!5.77e-07!12;CL:0000668!5.77e-07!12;CL:0000414!5.77e-07!12;CL:0000412!5.77e-07!12;CL:0000182!5.77e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;5.71e-15;12!CL:0002231;4.01e-09;3!CL:0000082;1.56e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,6.18e-15,12;CL:0000066,1.33e-13,253;CL:0000223,8.77e-12,58;CL:0002231,3.70e-09,3;CL:0000082,1.54e-08,19 | |||
|ontology_enrichment_development_v019=UBERON:0001041;2.38e-27;30!UBERON:0009497;1.51e-13;13!UBERON:0004161;1.69e-12;11!UBERON:0008947;9.70e-12;29!UBERON:0009847;8.09e-10;3!UBERON:0003353;8.09e-10;3!UBERON:0006595;4.72e-09;86!UBERON:0003104;1.50e-07;31!CL:0000223;4.58e-07;58 | |||
|ontology_enrichment_disease=DOID:305!4.20e-46!106;DOID:0050687!3.42e-36!143;DOID:162!6.42e-22!235;DOID:14566!7.02e-21!239;DOID:299!1.25e-14!25;DOID:7!1.37e-08!39;DOID:0050615!6.62e-08!16;DOID:1324!2.96e-07!15;DOID:5093!5.45e-07!4;DOID:1612!5.45e-07!4 | |ontology_enrichment_disease=DOID:305!4.20e-46!106;DOID:0050687!3.42e-36!143;DOID:162!6.42e-22!235;DOID:14566!7.02e-21!239;DOID:299!1.25e-14!25;DOID:7!1.37e-08!39;DOID:0050615!6.62e-08!16;DOID:1324!2.96e-07!15;DOID:5093!5.45e-07!4;DOID:1612!5.45e-07!4 | ||
|ontology_enrichment_disease_v019=DOID:5093;2.77e-13;4!DOID:1612;2.77e-13;4!DOID:305;8.38e-10;106!DOID:1324;9.50e-09;15!DOID:7;1.26e-08;39!DOID:0050615;3.92e-08;16!DOID:3905;6.21e-08;9!DOID:3119;4.50e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.43e-24,106;DOID:0050687,8.30e-16,143;DOID:5093,2.66e-13,4;DOID:1612,2.66e-13,4;DOID:7,3.70e-10,39;DOID:1324,9.58e-09,15;DOID:162,1.03e-08,235;DOID:14566,2.41e-08,239;DOID:0050615,3.95e-08,16;DOID:3905,6.27e-08,9;DOID:3119,4.38e-07,14 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002423;2.10e-17;25!UBERON:0002107;5.62e-14;19!UBERON:0006925;5.62e-14;19!UBERON:0002048;1.33e-13;22!UBERON:0000117;1.33e-13;22!UBERON:0000171;1.33e-13;22!UBERON:0000170;1.33e-13;22!UBERON:0002365;5.57e-11;31!UBERON:0002330;5.57e-11;31!UBERON:0005178;1.12e-09;34!UBERON:0002224;1.12e-09;34!UBERON:0000915;3.04e-09;52!UBERON:0002367;4.68e-09;11!UBERON:0010147;4.68e-09;11!UBERON:0000160;9.48e-09;17!UBERON:0005181;1.17e-08;35!UBERON:0004802;1.56e-08;19!UBERON:0000115;1.56e-08;19!UBERON:0005409;2.67e-08;22!UBERON:0003937;3.07e-08;12!UBERON:0005399;3.07e-08;12!UBERON:0009569;6.26e-08;110!UBERON:0002530;8.93e-08;57!UBERON:0000310;1.06e-07;10!UBERON:0004921;2.31e-07;33!UBERON:0004807;3.52e-07;22!UBERON:0001443;5.90e-07;11!UBERON:0005172;8.12e-07;52!UBERON:0005173;8.12e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,1.23e-30,118;UBERON:0005911,1.73e-28,82;UBERON:0001007,1.82e-24,145;UBERON:0001555,1.82e-24,145;UBERON:0007026,1.82e-24,145;UBERON:0004119,3.66e-21,160;UBERON:0000925,3.66e-21,160;UBERON:0006595,3.66e-21,160;UBERON:0005153,5.35e-21,37;UBERON:0007499,5.48e-20,25;UBERON:0009569,7.48e-20,112;UBERON:0009856,4.42e-19,26;UBERON:0003929,5.17e-19,54;UBERON:0009497,2.00e-17,25;UBERON:0000015,2.00e-17,25;UBERON:0002423,2.00e-17,25;UBERON:0006235,2.00e-17,25;UBERON:0004161,2.00e-17,25;UBERON:0001041,2.78e-17,87;UBERON:0008835,4.41e-17,22;UBERON:0003894,4.41e-17,22;UBERON:0009854,3.27e-16,23;UBERON:0005157,1.61e-15,47;UBERON:0002100,3.24e-15,199;UBERON:0005177,4.16e-15,101;UBERON:0002107,5.72e-14,19;UBERON:0006925,5.72e-14,19;UBERON:0008836,5.72e-14,19;UBERON:0000915,8.09e-14,52;UBERON:0002048,1.33e-13,22;UBERON:0000117,1.33e-13,22;UBERON:0000171,1.33e-13,22;UBERON:0000170,1.33e-13,22;UBERON:0005597,1.33e-13,22;UBERON:0000118,1.33e-13,22;UBERON:0002530,9.61e-12,59;UBERON:0005178,2.29e-11,34;UBERON:0002224,2.29e-11,34;UBERON:0002365,2.54e-11,31;UBERON:0002330,2.54e-11,31;UBERON:0011216,4.71e-11,223;UBERON:0005181,5.91e-11,35;UBERON:0008947,7.44e-10,38;UBERON:0003258,7.44e-10,38;UBERON:0002367,4.72e-09,11;UBERON:0010147,4.72e-09,11;UBERON:0009846,4.72e-09,11;UBERON:0003353,4.72e-09,11;UBERON:0004902,4.72e-09,11;UBERON:0003820,4.72e-09,11;UBERON:0009847,4.72e-09,11;UBERON:0000160,6.91e-09,17;UBERON:0005172,1.29e-08,54;UBERON:0005173,1.29e-08,54;UBERON:0001046,1.35e-08,19;UBERON:0004802,1.54e-08,19;UBERON:0000115,1.54e-08,19;UBERON:0003937,3.10e-08,12;UBERON:0005399,3.10e-08,12;UBERON:0000310,1.02e-07,10;UBERON:0002417,2.07e-07,60;UBERON:0000916,2.07e-07,60;UBERON:0005409,2.84e-07,25;UBERON:0001443,5.68e-07,11;UBERON:0000162,5.94e-07,14;UBERON:0001353,5.94e-07,14;UBERON:0000163,5.94e-07,14;UBERON:0006866,5.94e-07,14;UBERON:0000164,5.94e-07,14;UBERON:0000931,5.94e-07,14;UBERON:0003127,8.96e-07,2 | |||
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| ||
|short_description=p2@FOXA1 | |short_description=p2@FOXA1 | ||
}} | }} |
Latest revision as of 23:27, 19 September 2015
Short description: | p2@FOXA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FOXA1_5end |
Coexpression cluster: | C885_breast_Intestinal_MCF7_Prostate_small_colon_Hepatocyte |
Association with transcript: | -101bp_to_NM_004496, uc001wuf.2_5end |
EntrezGene: | FOXA1 |
HGNC: | 5021 |
UniProt: | P55317 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 6.18e-15 | 12 |
epithelial cell | 1.33e-13 | 253 |
endodermal cell | 8.77e-12 | 58 |
epithelial cell of prostate | 3.70e-09 | 3 |
epithelial cell of lung | 1.54e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.43e-24 | 106 |
cell type cancer | 8.30e-16 | 143 |
thoracic cancer | 2.66e-13 | 4 |
breast cancer | 2.66e-13 | 4 |
disease of anatomical entity | 3.70e-10 | 39 |
lung cancer | 9.58e-09 | 15 |
cancer | 1.03e-08 | 235 |
disease of cellular proliferation | 2.41e-08 | 239 |
respiratory system cancer | 3.95e-08 | 16 |
lung carcinoma | 6.27e-08 | 9 |
gastrointestinal system cancer | 4.38e-07 | 14 |