FFCP PHASE1:Hg19::chr13:111164370..111164403,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:111164370..111164403,+ | |||
|coexpression_cluster_id=C566 | |||
|description=CAGE_peak_at_chr13:111164370..111164403,+ | |description=CAGE_peak_at_chr13:111164370..111164403,+ | ||
|id=chr13:111164370..111164403,+ | |id=chr13:111164370..111164403,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.73e-19!180;CL:0000222!2.66e-16!119;CL:0000057!7.46e-11!75;CL:0000220!1.70e-09!246;CL:0002321!3.12e-09!248;CL:0000183!4.49e-09!59;CL:1000449!7.07e-09!16;CL:1000497!4.20e-08!18;CL:0002518!4.20e-08!18;CL:0000213!8.39e-08!57;CL:0000215!8.39e-08!57;CL:0000680!1.31e-07!57;CL:0000056!1.31e-07!57;CL:0000355!1.31e-07!57;CL:0002681!3.27e-07!13;CL:0002584!3.27e-07!13;CL:0000192!4.38e-07!42;CL:0000514!4.38e-07!42;CL:0000187!5.72e-07!54;CL:0000393!9.97e-07!60;CL:0000211!9.97e-07!60 | |ontology_enrichment_celltype=CL:0000055!1.73e-19!180;CL:0000222!2.66e-16!119;CL:0000057!7.46e-11!75;CL:0000220!1.70e-09!246;CL:0002321!3.12e-09!248;CL:0000183!4.49e-09!59;CL:1000449!7.07e-09!16;CL:1000497!4.20e-08!18;CL:0002518!4.20e-08!18;CL:0000213!8.39e-08!57;CL:0000215!8.39e-08!57;CL:0000680!1.31e-07!57;CL:0000056!1.31e-07!57;CL:0000355!1.31e-07!57;CL:0002681!3.27e-07!13;CL:0002584!3.27e-07!13;CL:0000192!4.38e-07!42;CL:0000514!4.38e-07!42;CL:0000187!5.72e-07!54;CL:0000393!9.97e-07!60;CL:0000211!9.97e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:1000449;3.51e-11;15!CL:1000497;3.65e-09;17!CL:0002518;3.65e-09;17!CL:0002681;4.88e-09;12!CL:0002584;4.88e-09;12!CL:1000507;1.55e-07;10!CL:1000494;1.55e-07;10!CL:1000746;7.52e-07;7!CL:1000612;7.52e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,4.41e-16,121;CL:1000449,2.04e-11,15;CL:1000497,2.31e-09,17;CL:0002518,2.31e-09,17;CL:0002681,2.85e-09,12;CL:0002584,2.85e-09,12;CL:0000057,8.31e-09,76;CL:0000213,5.38e-08,58;CL:0000215,5.38e-08,58;CL:1000507,9.68e-08,10;CL:1000494,9.68e-08,10;CL:0002078,3.88e-07,45;CL:0000680,5.90e-07,58;CL:0000056,5.90e-07,58;CL:0000355,5.90e-07,58;CL:0000192,7.36e-07,43;CL:0000514,7.36e-07,43;CL:1000746,7.45e-07,7;CL:1000612,7.45e-07,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!1.43e-13!143;UBERON:0002049!4.33e-13!79;UBERON:0007798!4.33e-13!79;UBERON:0003914!1.58e-12!118;UBERON:0002100!6.46e-11!216;UBERON:0004876!1.99e-10!20;UBERON:0000055!2.71e-10!69;UBERON:0001009!4.79e-10!113;UBERON:0004535!1.16e-09!110;UBERON:0000080!2.29e-09!18;UBERON:0002120!2.29e-09!18;UBERON:0004875!2.29e-09!18;UBERON:0005721!2.29e-09!18;UBERON:0005754!2.29e-09!18;UBERON:0007297!2.29e-09!18;UBERON:0003064!2.99e-09!37;UBERON:0006555!5.35e-09!17;UBERON:0005103!5.35e-09!17;UBERON:0000083!5.35e-09!17;UBERON:0009201!5.35e-09!17;UBERON:0004819!5.35e-09!17;UBERON:0006553!5.35e-09!17;UBERON:0003074!5.35e-09!17;UBERON:0003060!5.35e-09!17;UBERON:0004211!7.07e-09!16;UBERON:0001285!7.07e-09!16;UBERON:0007684!7.07e-09!16;UBERON:0003220!7.07e-09!16;UBERON:0004208!7.07e-09!16;UBERON:0003887!1.21e-08!21;UBERON:0004872!1.36e-08!84;UBERON:0000353!1.59e-08!17;UBERON:0002385!1.69e-08!63;UBERON:0001015!1.69e-08!63;UBERON:0000383!1.69e-08!63;UBERON:0001134!2.30e-08!61;UBERON:0002036!2.30e-08!61;UBERON:0003082!2.30e-08!61;UBERON:0003103!2.64e-08!69;UBERON:0000490!4.92e-08!138;UBERON:0001981!6.04e-08!60;UBERON:0007500!6.04e-08!60;UBERON:0004537!6.04e-08!60;UBERON:0006965!6.04e-08!60;UBERON:0002417!7.00e-08!61;UBERON:0000916!7.00e-08!61;UBERON:0000468!9.67e-08!659;UBERON:0003886!1.15e-07!63;UBERON:0003104!1.66e-07!238;UBERON:0009142!1.66e-07!238;UBERON:0004290!1.86e-07!70;UBERON:0000486!2.50e-07!82;UBERON:0000119!2.60e-07!312;UBERON:0006554!3.16e-07!44;UBERON:0001008!3.21e-07!45;UBERON:0001225!3.27e-07!13;UBERON:0008987!3.27e-07!13;UBERON:0000914!3.65e-07!83;UBERON:0002329!3.65e-07!83;UBERON:0003077!3.65e-07!83;UBERON:0003059!3.65e-07!83;UBERON:0007282!3.65e-07!83;UBERON:0009618!3.65e-07!83;UBERON:0007285!3.65e-07!83;UBERON:0000475!4.32e-07!365;UBERON:0009569!4.96e-07!113;UBERON:0000483!6.41e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;3.51e-11;15!UBERON:0004819;3.51e-11;15!UBERON:0001285;3.51e-11;15!UBERON:0007684;3.51e-11;15!UBERON:0000353;2.62e-09;15!UBERON:0001225;4.88e-09;12!UBERON:0008987;4.88e-09;12!UBERON:0004211;1.55e-07;10!UBERON:0009773;1.55e-07;10!UBERON:0001231;1.55e-07;10!UBERON:0004810;1.55e-07;10!UBERON:0001851;2.88e-07;15!UBERON:0003914;3.21e-07;74!UBERON:0000074;7.52e-07;7!UBERON:0001229;7.52e-07;7 | |||
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| ||
|short_description=p@chr13:111164370..111164403,+ | |short_description=p@chr13:111164370..111164403,+ | ||
}} | }} |
Latest revision as of 14:33, 24 July 2015
Short description: | p@chr13:111164370..111164403, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:111164370..111164403, + |
Coexpression cluster: | C566_Pericytes_Renal_hepatic_Fibroblast_Endothelial_Hepatic_Lens |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 4.41e-16 | 121 |
epithelial cell of nephron | 2.04e-11 | 15 |
kidney cell | 2.31e-09 | 17 |
kidney epithelial cell | 2.31e-09 | 17 |
kidney cortical cell | 2.85e-09 | 12 |
renal cortical epithelial cell | 2.85e-09 | 12 |
fibroblast | 8.31e-09 | 76 |
lining cell | 5.38e-08 | 58 |
barrier cell | 5.38e-08 | 58 |
kidney tubule cell | 9.68e-08 | 10 |
nephron tubule epithelial cell | 9.68e-08 | 10 |
meso-epithelial cell | 3.88e-07 | 45 |
muscle precursor cell | 5.90e-07 | 58 |
myoblast | 5.90e-07 | 58 |
multi-potent skeletal muscle stem cell | 5.90e-07 | 58 |
smooth muscle cell | 7.36e-07 | 43 |
smooth muscle myoblast | 7.36e-07 | 43 |
glomerular cell | 7.45e-07 | 7 |
kidney corpuscule cell | 7.45e-07 | 7 |