FFCP PHASE1:Hg19::chr18:40857368..40857384,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6860 | |EntrezGene=6860 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11512 | |HGNC=11512 | ||
|TSSclassifier=strong | |||
|UniProt=F5GY31 | |UniProt=F5GY31 | ||
|association_with_transcript=-27bp_to_ENST00000442661_5end | |association_with_transcript=-27bp_to_ENST00000442661_5end | ||
|cluster_id=chr18:40857368..40857384,- | |||
|coexpression_cluster_id=C759 | |||
|description=CAGE_peak_6_at_SYT4_5end | |description=CAGE_peak_6_at_SYT4_5end | ||
|id=chr18:40857368..40857384,- | |id=chr18:40857368..40857384,- | ||
|ontology_enrichment_celltype=CL:0000047!4.19e-10!8;CL:0000540!4.15e-07!6;CL:0000031!4.15e-07!6;CL:0000404!4.15e-07!6 | |ontology_enrichment_celltype=CL:0000047!4.19e-10!8;CL:0000540!4.15e-07!6;CL:0000031!4.15e-07!6;CL:0000404!4.15e-07!6 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.74e-19;82!UBERON:0006215;2.92e-10;3 | |||
|ontology_enrichment_disease=DOID:169!2.03e-07!6 | |||
|ontology_enrichment_disease_v019=DOID:169;1.68e-07;6!DOID:171;9.42e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:169,1.57e-07,6;DOID:171,8.99e-07,10 | |||
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|short_description=p6@SYT4 | |short_description=p6@SYT4 | ||
}} | }} |
Latest revision as of 13:47, 19 September 2015
Short description: | p6@SYT4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SYT4_5end |
Coexpression cluster: | C759_nonsmall_gastrointestinal_occipital_pineal_cerebellum_small_argyrophil |
Association with transcript: | -27bp_to_ENST00000442661_5end |
EntrezGene: | SYT4 |
HGNC: | 11512 |
UniProt: | F5GY31 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 1.57e-07 | 6 |
neuroectodermal tumor | 8.99e-07 | 10 |