FFCP PHASE1:Hg19::chr17:7166500..7166538,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1366 | |EntrezGene=1366 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2049 | |HGNC=2049 | ||
|TSSclassifier=strong | |||
|UniProt=O95471 | |UniProt=O95471 | ||
|association_with_transcript=0bp_to_ENST00000360325,NM_001185022,uc002gfn.3_5end | |association_with_transcript=0bp_to_ENST00000360325,NM_001185022,uc002gfn.3_5end | ||
|cluster_id=chr17:7166500..7166538,- | |||
|description=CAGE_peak_2_at_CLDN7_5end | |description=CAGE_peak_2_at_CLDN7_5end | ||
|id=chr17:7166500..7166538,- | |id=chr17:7166500..7166538,- | ||
|ontology_enrichment_celltype=CL:0000066!9.57e-39!254;CL:0002076!1.43e-12!43;CL:0000223!2.95e-10!59;CL:0000076!5.87e-09!62;CL:1000497!6.82e-08!18;CL:0002518!6.82e-08!18;CL:1000507!9.53e-08!12;CL:1000494!9.53e-08!12;CL:1000449!9.65e-08!16;CL:0000071!2.02e-07!18;CL:0002546!2.02e-07!18 | |ontology_enrichment_celltype=CL:0000066!9.57e-39!254;CL:0002076!1.43e-12!43;CL:0000223!2.95e-10!59;CL:0000076!5.87e-09!62;CL:1000497!6.82e-08!18;CL:0002518!6.82e-08!18;CL:1000507!9.53e-08!12;CL:1000494!9.53e-08!12;CL:1000449!9.65e-08!16;CL:0000071!2.02e-07!18;CL:0002546!2.02e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0002076;1.68e-12;42!CL:1000449;7.66e-10;15!CL:1000507;2.51e-09;10!CL:1000494;2.51e-09;10!CL:0000071;2.89e-09;18!CL:1000497;3.07e-09;17!CL:0002518;3.07e-09;17!CL:0002368;1.78e-08;13!CL:0002681;1.05e-07;12!CL:0002584;1.05e-07;12!CL:0002251;4.61e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.96e-43,253;CL:0002076,1.59e-16,42;CL:0000223,3.66e-14,58;CL:1000449,5.98e-10,15;CL:1000507,2.39e-09,10;CL:1000494,2.39e-09,10;CL:1000497,2.50e-09,17;CL:0002518,2.50e-09,17;CL:0000071,2.96e-09,18;CL:0002546,2.96e-09,18;CL:0000076,1.30e-08,63;CL:0002368,1.83e-08,13;CL:0002681,8.40e-08,12;CL:0002584,8.40e-08,12;CL:0002251,4.73e-07,20;CL:0002078,8.55e-07,45 | |||
|ontology_enrichment_development_v019=UBERON:0008947;4.28e-12;29!CL:0002546;2.89e-09;18!CL:0000223;4.06e-08;58!UBERON:0006595;1.55e-07;86 | |||
|ontology_enrichment_disease=DOID:305!1.45e-19!106;DOID:0050687!2.30e-10!143;DOID:1749!1.84e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.46e-10;14!DOID:305;8.00e-08;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.94e-24,106;DOID:0050687,3.77e-15,143;DOID:1749,1.29e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.89e-20!169;UBERON:0000925!1.89e-20!169;UBERON:0006595!1.89e-20!169;UBERON:0001007!1.87e-16!155;UBERON:0001555!1.87e-16!155;UBERON:0007026!1.87e-16!155;UBERON:0001004!9.76e-16!72;UBERON:0004921!3.76e-15!129;UBERON:0004185!3.76e-15!129;UBERON:0000464!2.42e-14!104;UBERON:0000065!3.11e-14!53;UBERON:0008947!5.15e-13!38;UBERON:0003258!5.15e-13!38;UBERON:0000077!1.10e-12!130;UBERON:0000466!2.41e-12!126;UBERON:0001008!1.09e-11!45;UBERON:0006554!2.44e-11!44;UBERON:0003104!3.17e-11!238;UBERON:0009142!3.17e-11!238;UBERON:0000072!3.80e-11!46;UBERON:0000481!6.77e-10!347;UBERON:0001041!1.78e-09!98;UBERON:0003064!2.36e-09!37;UBERON:0000926!2.81e-09!448;UBERON:0004120!2.81e-09!448;UBERON:0006603!2.81e-09!448;UBERON:0009569!3.08e-09!113;UBERON:0005178!3.17e-09!34;UBERON:0002224!3.17e-09!34;UBERON:0000468!3.64e-09!659;UBERON:0000063!4.07e-09!97;UBERON:0005177!4.42e-09!107;UBERON:0000058!9.59e-09!26;UBERON:0000080!1.06e-08!18;UBERON:0002120!1.06e-08!18;UBERON:0004875!1.06e-08!18;UBERON:0005721!1.06e-08!18;UBERON:0005754!1.06e-08!18;UBERON:0007297!1.06e-08!18;UBERON:0005181!1.42e-08!35;UBERON:0004876!4.15e-08!20;UBERON:0006555!4.44e-08!17;UBERON:0005103!4.44e-08!17;UBERON:0000083!4.44e-08!17;UBERON:0009201!4.44e-08!17;UBERON:0004819!4.44e-08!17;UBERON:0006553!4.44e-08!17;UBERON:0003074!4.44e-08!17;UBERON:0003060!4.44e-08!17;UBERON:0000922!5.09e-08!612;UBERON:0000915!6.44e-08!52;UBERON:0009773!9.53e-08!12;UBERON:0001231!9.53e-08!12;UBERON:0004810!9.53e-08!12;UBERON:0004211!9.65e-08!16;UBERON:0001285!9.65e-08!16;UBERON:0007684!9.65e-08!16;UBERON:0003220!9.65e-08!16;UBERON:0004208!9.65e-08!16;UBERON:0001048!1.09e-07!168;UBERON:0001986!2.02e-07!18;UBERON:0004638!2.02e-07!18;UBERON:0004852!2.02e-07!18;UBERON:0005911!2.03e-07!82;UBERON:0002113!2.16e-07!27;UBERON:0003918!2.16e-07!27;UBERON:0005095!2.16e-07!27;UBERON:0007687!2.16e-07!27;UBERON:0000161!3.43e-07!35;UBERON:0000480!3.46e-07!626;UBERON:0000467!3.49e-07!625;UBERON:0002553!5.96e-07!70;UBERON:0000487!9.33e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000065;1.04e-14;44!UBERON:0000072;1.46e-13;37!UBERON:0005178;7.90e-12;34!UBERON:0002224;7.90e-12;34!UBERON:0006554;3.48e-11;30!UBERON:0001008;3.48e-11;30!UBERON:0005181;5.11e-11;35!UBERON:0001004;9.84e-11;65!UBERON:0006555;7.66e-10;15!UBERON:0004819;7.66e-10;15!UBERON:0001285;7.66e-10;15!UBERON:0007684;7.66e-10;15!UBERON:0004921;1.54e-09;33!UBERON:0004211;2.51e-09;10!UBERON:0009773;2.51e-09;10!UBERON:0001231;2.51e-09;10!UBERON:0004810;2.51e-09;10!UBERON:0004638;2.89e-09;18!UBERON:0001986;2.89e-09;18!UBERON:0004852;2.89e-09;18!UBERON:0000487;6.84e-09;22!UBERON:0001737;6.16e-08;9!UBERON:0001557;6.16e-08;9!UBERON:0006914;6.54e-08;25!UBERON:0007196;7.06e-08;15!UBERON:0001558;7.06e-08;15!UBERON:0005911;7.13e-08;36!UBERON:0002113;9.47e-08;24!UBERON:0011143;9.47e-08;24!UBERON:0001225;1.05e-07;12!UBERON:0008987;1.05e-07;12!UBERON:0004807;1.58e-07;22!UBERON:0000353;1.97e-07;15!UBERON:0002048;2.40e-07;22!UBERON:0000117;2.40e-07;22!UBERON:0000171;2.40e-07;22!UBERON:0000170;2.40e-07;22!UBERON:0000490;2.40e-07;33!UBERON:0005409;3.42e-07;22!UBERON:0000489;6.16e-07;29 | |||
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| ||
|short_description=p2@CLDN7 | |short_description=p2@CLDN7 | ||
}} | }} |
Latest revision as of 06:25, 17 September 2015
Short description: | p2@CLDN7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CLDN7_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000360325, NM_001185022, uc002gfn.3_5end |
EntrezGene: | CLDN7 |
HGNC: | 2049 |
UniProt: | O95471 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.96e-43 | 253 |
endo-epithelial cell | 1.59e-16 | 42 |
endodermal cell | 3.66e-14 | 58 |
epithelial cell of nephron | 5.98e-10 | 15 |
kidney tubule cell | 2.39e-09 | 10 |
nephron tubule epithelial cell | 2.39e-09 | 10 |
kidney cell | 2.50e-09 | 17 |
kidney epithelial cell | 2.50e-09 | 17 |
blood vessel endothelial cell | 2.96e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.96e-09 | 18 |
squamous epithelial cell | 1.30e-08 | 63 |
respiratory epithelial cell | 1.83e-08 | 13 |
kidney cortical cell | 8.40e-08 | 12 |
renal cortical epithelial cell | 8.40e-08 | 12 |
epithelial cell of alimentary canal | 4.73e-07 | 20 |
meso-epithelial cell | 8.55e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.94e-24 | 106 |
cell type cancer | 3.77e-15 | 143 |
squamous cell carcinoma | 1.29e-10 | 14 |