FFCP PHASE1:Hg19::chr16:67233436..67233454,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79767 | |EntrezGene=79767 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17289 | |HGNC=17289 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=24bp_to_ENST00000477898,uc002esc.2_5end | |association_with_transcript=24bp_to_ENST00000477898,uc002esc.2_5end | ||
|cluster_id=chr16:67233436..67233454,+ | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_4_at_ELMO3_5end | |description=CAGE_peak_4_at_ELMO3_5end | ||
|id=chr16:67233436..67233454,+ | |id=chr16:67233436..67233454,+ | ||
|ontology_enrichment_celltype=CL:0002076!3.21e-21!43;CL:0000066!9.27e-21!254;CL:0002368!2.56e-15!13;CL:0000223!6.86e-15!59;CL:0000039!1.79e-13!7;CL:0000586!1.79e-13!7;CL:0002159!4.45e-12!13;CL:0002251!7.30e-09!21;CL:0000244!9.64e-09!4;CL:0000731!9.64e-09!4;CL:0002202!2.24e-08!9;CL:0002632!2.24e-08!9;CL:0002328!1.28e-07!3;CL:0002541!1.28e-07!3;CL:0002166!3.97e-07!3;CL:0002621!6.10e-07!3;CL:0000362!9.78e-07!8 | |ontology_enrichment_celltype=CL:0002076!3.21e-21!43;CL:0000066!9.27e-21!254;CL:0002368!2.56e-15!13;CL:0000223!6.86e-15!59;CL:0000039!1.79e-13!7;CL:0000586!1.79e-13!7;CL:0002159!4.45e-12!13;CL:0002251!7.30e-09!21;CL:0000244!9.64e-09!4;CL:0000731!9.64e-09!4;CL:0002202!2.24e-08!9;CL:0002632!2.24e-08!9;CL:0002328!1.28e-07!3;CL:0002541!1.28e-07!3;CL:0002166!3.97e-07!3;CL:0002621!6.10e-07!3;CL:0000362!9.78e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0002368;7.21e-15;13!CL:0000349;1.26e-14;19!CL:0002541;7.90e-12;3!CL:0002328;2.71e-11;3!CL:0002231;2.71e-11;3!CL:0002076;3.90e-10;42!CL:0002327;1.63e-08;4!CL:0002202;2.12e-08;9!CL:0002632;2.12e-08;9!CL:0000362;3.05e-08;9!CL:0002537;3.62e-07;5!CL:0000312;4.10e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,6.81e-15,13;CL:0000349,1.34e-14,19;CL:0002541,7.91e-12,3;CL:0002328,1.74e-11,3;CL:0002231,2.64e-11,3;CL:0002076,1.08e-10,42;CL:0002202,1.76e-08,9;CL:0002632,1.76e-08,9;CL:0002327,2.06e-08,4;CL:0000362,2.20e-08,9;CL:0000223,1.90e-07,58;CL:0000312,3.46e-07,5;CL:0002537,3.80e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0003124;6.46e-09;1!UBERON:0005754;6.46e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!4.38e-17!14;UBERON:0000158!4.38e-17!14;UBERON:0003124!3.21e-11!7;UBERON:0003729!6.52e-09!5;UBERON:0000478!8.67e-09!24;UBERON:0004119!1.41e-08!169;UBERON:0000925!1.41e-08!169;UBERON:0006595!1.41e-08!169;UBERON:0000473!4.25e-08!8;UBERON:0000305!1.08e-07!7;UBERON:0003135!1.21e-07!11;UBERON:0000476!1.28e-07!3;UBERON:0004815!1.28e-07!3;UBERON:0002031!1.28e-07!3;UBERON:0000920!1.28e-07!3;UBERON:0005911!1.47e-07!82;UBERON:0003343!2.74e-07!4;UBERON:0004785!2.74e-07!4;UBERON:0003101!3.89e-07!22;UBERON:0000079!3.89e-07!22;UBERON:0004923!4.30e-07!57;UBERON:0000365!5.74e-07!5;UBERON:0001949!6.10e-07!3;UBERON:0000344!9.87e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;9.30e-20;10!UBERON:0000158;9.30e-20;10!UBERON:0000007;4.07e-16;2!UBERON:0000478;2.35e-15;24!UBERON:0003124;7.90e-12;3!UBERON:0000920;7.90e-12;3!UBERON:0004815;2.71e-11;3!UBERON:0002031;2.71e-11;3!UBERON:0000305;1.16e-10;7!UBERON:0000998;6.46e-09;1!UBERON:0006868;6.46e-09;1!UBERON:0001987;9.37e-09;4!UBERON:0001911;1.63e-08;4!UBERON:0003296;1.63e-08;4!UBERON:0010133;1.63e-08;4!UBERON:0002185;4.10e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,7.63e-27,14;UBERON:0000158,7.63e-27,14;UBERON:0003124,1.81e-18,7;UBERON:0000007,4.08e-16,2;UBERON:0000478,2.41e-15,24;UBERON:0000920,7.91e-12,3;UBERON:0004815,1.74e-11,3;UBERON:0002031,1.74e-11,3;UBERON:0000305,1.26e-10,7;UBERON:0004871,2.32e-09,8;UBERON:0000998,7.27e-09,1;UBERON:0006868,7.27e-09,1;UBERON:0001987,8.85e-09,4;UBERON:0004340,8.85e-09,4;UBERON:0003296,1.64e-08,4;UBERON:0010133,1.64e-08,4;UBERON:0001911,2.06e-08,4;UBERON:0005333,2.06e-08,4;UBERON:0008425,2.06e-08,4;UBERON:0005311,2.06e-08,4;UBERON:0002185,3.16e-07,5;UBERON:0002530,3.51e-07,59;UBERON:0005153,5.22e-07,37 | |||
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| ||
|short_description=p4@ELMO3 | |short_description=p4@ELMO3 | ||
}} | }} |
Latest revision as of 10:15, 17 September 2015
Short description: | p4@ELMO3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ELMO3_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | 24bp_to_ENST00000477898, uc002esc.2_5end |
EntrezGene: | ELMO3 |
HGNC: | 17289 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 6.81e-15 | 13 |
extraembryonic cell | 1.34e-14 | 19 |
chorionic membrane mesenchymal stem cell | 7.91e-12 | 3 |
bronchial epithelial cell | 1.74e-11 | 3 |
epithelial cell of prostate | 2.64e-11 | 3 |
endo-epithelial cell | 1.08e-10 | 42 |
epithelial cell of tracheobronchial tree | 1.76e-08 | 9 |
epithelial cell of lower respiratory tract | 1.76e-08 | 9 |
mammary gland epithelial cell | 2.06e-08 | 4 |
epidermal cell | 2.20e-08 | 9 |
endodermal cell | 1.90e-07 | 58 |
keratinocyte | 3.46e-07 | 5 |
amnion mesenchymal stem cell | 3.80e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 7.63e-27 | 14 |
membranous layer | 7.63e-27 | 14 |
chorion | 1.81e-18 | 7 |
pituitary gland | 4.08e-16 | 2 |
extraembryonic structure | 2.41e-15 | 24 |
egg chorion | 7.91e-12 | 3 |
lower respiratory tract epithelium | 1.74e-11 | 3 |
epithelium of bronchus | 1.74e-11 | 3 |
amnion | 1.26e-10 | 7 |
somatic layer of lateral plate mesoderm | 2.32e-09 | 8 |
seminal vesicle | 7.27e-09 | 1 |
seminal fluid secreting gland | 7.27e-09 | 1 |
placenta | 8.85e-09 | 4 |
allantois | 8.85e-09 | 4 |
gland of diencephalon | 1.64e-08 | 4 |
neuroendocrine gland | 1.64e-08 | 4 |
mammary gland | 2.06e-08 | 4 |
mammary bud | 2.06e-08 | 4 |
mammary ridge | 2.06e-08 | 4 |
mammary placode | 2.06e-08 | 4 |
bronchus | 3.16e-07 | 5 |
gland | 3.51e-07 | 59 |
epithelial bud | 5.22e-07 | 37 |