FFCP PHASE1:Hg19::chr11:2016780..2016789,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=Q9P1C7 | |UniProt=Q9P1C7 | ||
|association_with_transcript=3bp_to_AF116709_5end | |association_with_transcript=3bp_to_AF116709_5end | ||
|cluster_id=chr11:2016780..2016789,- | |||
|coexpression_cluster_id=C227 | |||
|description=CAGE_peak_2_at_AF116709_5end | |description=CAGE_peak_2_at_AF116709_5end | ||
|id=chr11:2016780..2016789,- | |id=chr11:2016780..2016789,- | ||
|ontology_enrichment_celltype=CL:0002541!9.41e-11!3;CL:0002575!1.65e-07!2;CL:0002536!2.05e-07!2;CL:0002537!9.94e-07!5 | |ontology_enrichment_celltype=CL:0002541!9.41e-11!3;CL:0002575!1.65e-07!2;CL:0002536!2.05e-07!2;CL:0002537!9.94e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000349;6.11e-35;19!CL:0002537;5.73e-20;5!CL:0002541;1.82e-15;3!CL:0002577;6.54e-15;3!CL:0000134;7.69e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,5.59e-35,19;CL:0002537,5.05e-20,5;CL:0002541,1.82e-15,3;CL:0002577,6.54e-15,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.31e-26!14;UBERON:0000158!1.31e-26!14;UBERON:0000478!2.62e-17!24;UBERON:0003124!1.13e-16!7;UBERON:0001737!3.57e-15!9;UBERON:0001557!1.34e-13!19;UBERON:0004923!3.89e-13!57;UBERON:0000305!7.97e-12!7;UBERON:0000476!9.41e-11!3;UBERON:0000920!9.41e-11!3;UBERON:0004871!2.73e-10!8;UBERON:0001723!1.30e-09!3;UBERON:0001033!1.30e-09!3;UBERON:0010056!1.30e-09!3;UBERON:0000064!1.47e-09!219;UBERON:0001987!5.27e-08!4;UBERON:0004340!5.27e-08!4;UBERON:0000072!7.63e-08!46;UBERON:0004119!8.42e-07!169;UBERON:0000925!8.42e-07!169;UBERON:0006595!8.42e-07!169 | |ontology_enrichment_uberon=UBERON:0005631!1.31e-26!14;UBERON:0000158!1.31e-26!14;UBERON:0000478!2.62e-17!24;UBERON:0003124!1.13e-16!7;UBERON:0001737!3.57e-15!9;UBERON:0001557!1.34e-13!19;UBERON:0004923!3.89e-13!57;UBERON:0000305!7.97e-12!7;UBERON:0000476!9.41e-11!3;UBERON:0000920!9.41e-11!3;UBERON:0004871!2.73e-10!8;UBERON:0001723!1.30e-09!3;UBERON:0001033!1.30e-09!3;UBERON:0010056!1.30e-09!3;UBERON:0000064!1.47e-09!219;UBERON:0001987!5.27e-08!4;UBERON:0004340!5.27e-08!4;UBERON:0000072!7.63e-08!46;UBERON:0004119!8.42e-07!169;UBERON:0000925!8.42e-07!169;UBERON:0006595!8.42e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;1.70e-27;24!UBERON:0005631;7.10e-27;10!UBERON:0000158;7.10e-27;10!UBERON:0003124;1.82e-15;3!UBERON:0000920;1.82e-15;3!UBERON:0000305;1.93e-14;7!UBERON:0002426;3.64e-12;1!UBERON:0003831;3.64e-12;1!UBERON:0003898;3.64e-12;1!UBERON:0004830;3.64e-12;1!UBERON:0003830;3.64e-12;1!UBERON:0005175;3.64e-12;1!UBERON:0001774;3.64e-12;1!UBERON:0001103;3.64e-12;1!UBERON:0001987;2.02e-11;4!UBERON:0001052;2.92e-11;4!UBERON:0005409;3.49e-11;22!UBERON:0000160;2.14e-09;17!UBERON:0004907;3.44e-09;5!UBERON:0000059;5.22e-09;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.09e-36,14;UBERON:0000158,1.09e-36,14;UBERON:0000478,1.59e-27,24;UBERON:0003124,1.43e-24,7;UBERON:0000920,1.82e-15,3;UBERON:0000305,1.76e-14,7;UBERON:0004871,9.64e-13,8;UBERON:0002426,4.06e-12,1;UBERON:0003831,4.06e-12,1;UBERON:0003898,4.06e-12,1;UBERON:0004830,4.06e-12,1;UBERON:0003830,4.06e-12,1;UBERON:0005175,4.06e-12,1;UBERON:0001774,4.06e-12,1;UBERON:0001103,4.06e-12,1;UBERON:0010084,4.06e-12,1;UBERON:0001987,2.02e-11,4;UBERON:0004340,2.02e-11,4;UBERON:0001052,2.63e-11,4;UBERON:0005409,6.60e-10,25;UBERON:0000160,2.09e-09,17;UBERON:0004907,3.17e-09,5;UBERON:0000059,4.67e-09,11;UBERON:0004923,2.87e-07,66 | |||
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| ||
|short_description=p2@AF116709 | |short_description=p2@AF116709 | ||
}} | }} |
Latest revision as of 06:11, 17 September 2015
Short description: | p2@AF116709 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_AF116709_5end |
Coexpression cluster: | C227_chorionic_amniotic_Mesenchymal_Placental_gastric_diaphragm_tongue |
Association with transcript: | 3bp_to_AF116709_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 5.59e-35 | 19 |
amnion mesenchymal stem cell | 5.05e-20 | 5 |
chorionic membrane mesenchymal stem cell | 1.82e-15 | 3 |
placental epithelial cell | 6.54e-15 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.09e-36 | 14 |
membranous layer | 1.09e-36 | 14 |
extraembryonic structure | 1.59e-27 | 24 |
chorion | 1.43e-24 | 7 |
egg chorion | 1.82e-15 | 3 |
amnion | 1.76e-14 | 7 |
somatic layer of lateral plate mesoderm | 9.64e-13 | 8 |
chest muscle | 4.06e-12 | 1 |
respiratory system muscle | 4.06e-12 | 1 |
skeletal muscle of trunk | 4.06e-12 | 1 |
respiratory system skeletal muscle | 4.06e-12 | 1 |
thoracic segment muscle | 4.06e-12 | 1 |
chest organ | 4.06e-12 | 1 |
muscle of trunk | 4.06e-12 | 1 |
diaphragm | 4.06e-12 | 1 |
future diaphragm | 4.06e-12 | 1 |
placenta | 2.02e-11 | 4 |
allantois | 2.02e-11 | 4 |
rectum | 2.63e-11 | 4 |
gastrointestinal system | 6.60e-10 | 25 |
intestine | 2.09e-09 | 17 |
lower digestive tract | 3.17e-09 | 5 |
large intestine | 4.67e-09 | 11 |
organ component layer | 2.87e-07 | 66 |