FFCP PHASE1:Mm9::chr4:140256402..140256444,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=108911 | |EntrezGene=108911 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3463 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BK67 | |UniProt=Q8BK67 | ||
|association_with_transcript=-11bp_to_ENSMUST00000071169_5end | |association_with_transcript=-11bp_to_ENSMUST00000071169_5end | ||
|cluster_id=chr4:140256402..140256444,+ | |||
|description=CAGE_peak_5_at_Rcc2_5end | |description=CAGE_peak_5_at_Rcc2_5end | ||
|id=chr4:140256402..140256444,+ | |id=chr4:140256402..140256444,+ | ||
|ontology_enrichment_celltype=CL:0000988!5.42e-15!32;CL:0002032!5.42e-15!32;CL:0000037!5.42e-15!32;CL:0000566!5.42e-15!32;CL:0000837!5.42e-15!32;CL:0002320!5.46e-14!46;CL:0000134!5.46e-14!46;CL:0002031!7.69e-13!25;CL:0000219!4.96e-12!54;CL:0000838!3.61e-09!12;CL:0000738!5.01e-09!17;CL:0002087!5.01e-09!17;CL:0000063!1.76e-08!66;CL:0000084!1.95e-08!11;CL:0000827!1.95e-08!11;CL:0000049!2.13e-08!19;CL:0000542!7.91e-08!13;CL:0000051!7.91e-08!13;CL:0000791!3.61e-07!9;CL:0000789!3.61e-07!9;CL:0002420!3.61e-07!9;CL:0002419!3.61e-07!9;CL:0000790!3.61e-07!9;CL:0000763!6.42e-07!16 | |ontology_enrichment_celltype=CL:0000988!5.42e-15!32;CL:0002032!5.42e-15!32;CL:0000037!5.42e-15!32;CL:0000566!5.42e-15!32;CL:0000837!5.42e-15!32;CL:0002320!5.46e-14!46;CL:0000134!5.46e-14!46;CL:0002031!7.69e-13!25;CL:0000219!4.96e-12!54;CL:0000838!3.61e-09!12;CL:0000738!5.01e-09!17;CL:0002087!5.01e-09!17;CL:0000063!1.76e-08!66;CL:0000084!1.95e-08!11;CL:0000827!1.95e-08!11;CL:0000049!2.13e-08!19;CL:0000542!7.91e-08!13;CL:0000051!7.91e-08!13;CL:0000791!3.61e-07!9;CL:0000789!3.61e-07!9;CL:0002420!3.61e-07!9;CL:0002419!3.61e-07!9;CL:0000790!3.61e-07!9;CL:0000763!6.42e-07!16 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,3.61e-26,32;CL:0002032,3.61e-26,32;CL:0000037,3.61e-26,32;CL:0000837,3.61e-26,32;CL:0002320,4.48e-25,46;CL:0000134,4.48e-25,46;CL:0002031,3.13e-21,25;CL:0000219,1.15e-19,54;CL:0000838,1.05e-15,12;CL:0000738,1.99e-15,17;CL:0002087,1.99e-15,17;CL:0000084,2.41e-14,11;CL:0000827,2.41e-14,11;CL:0000542,3.46e-14,13;CL:0000051,3.46e-14,13;CL:0000049,4.02e-13,19;CL:0000791,5.39e-12,9;CL:0000789,5.39e-12,9;CL:0002420,5.39e-12,9;CL:0002419,5.39e-12,9;CL:0000790,5.39e-12,9;CL:0000624,1.06e-10,8;CL:0000034,1.20e-10,97;CL:0000763,1.98e-10,16;CL:0000723,3.01e-09,91;CL:0000048,3.01e-09,91;CL:0000893,2.09e-08,6;CL:0002489,2.09e-08,6;CL:0000898,2.09e-08,6;CL:0000809,2.09e-08,6;CL:0000810,2.09e-08,6;CL:0000895,2.09e-08,6;CL:0000808,2.09e-08,6;CL:0000894,2.09e-08,6;CL:0000806,2.09e-08,6;CL:0000807,2.09e-08,6;CL:0000805,2.09e-08,6;CL:0002425,2.09e-08,6;CL:0002436,2.09e-08,6;CL:0002427,2.09e-08,6;CL:0002428,2.09e-08,6;CL:0002429,2.09e-08,6;CL:0002433,2.09e-08,6;CL:0002431,2.09e-08,6;CL:0002432,2.09e-08,6;CL:0000839,1.17e-07,13;CL:0000553,2.64e-07,6;CL:0000556,2.64e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.07e-20!48;UBERON:0002390!6.01e-20!45;UBERON:0003061!6.01e-20!45;UBERON:0002405!4.16e-18!70;UBERON:0002384!5.46e-14!46;UBERON:0004177!6.83e-12!29;UBERON:0003081!3.32e-11!88;UBERON:0000072!2.34e-10!27;UBERON:0003408!4.61e-10!24;UBERON:0005057!8.42e-10!51;UBERON:0006562!8.69e-10!24;UBERON:0001557!8.69e-10!24;UBERON:0001042!8.69e-10!24;UBERON:0008814!8.69e-10!24;UBERON:0009145!8.69e-10!24;UBERON:0002370!1.20e-09!23;UBERON:0000974!1.20e-09!23;UBERON:0004807!1.20e-09!23;UBERON:0005058!1.20e-09!23;UBERON:0003351!1.20e-09!23;UBERON:0009113!1.20e-09!23;UBERON:0003295!1.20e-09!23;UBERON:0009722!1.20e-09!23;UBERON:0005562!1.20e-09!23;UBERON:0007690!1.20e-09!23;UBERON:0001004!2.66e-09!42;UBERON:0000065!6.50e-09!41;UBERON:0002371!7.48e-09!16;UBERON:0001474!1.28e-08!22;UBERON:0004765!1.28e-08!22;UBERON:0001434!1.28e-08!22;UBERON:0002204!1.29e-08!32;UBERON:0000077!1.51e-07!97;UBERON:0000063!1.85e-07!35;UBERON:0000926!1.95e-07!193;UBERON:0004120!1.95e-07!193;UBERON:0006603!1.95e-07!193;UBERON:0001041!4.61e-07!92 | |ontology_enrichment_uberon=UBERON:0002193!1.07e-20!48;UBERON:0002390!6.01e-20!45;UBERON:0003061!6.01e-20!45;UBERON:0002405!4.16e-18!70;UBERON:0002384!5.46e-14!46;UBERON:0004177!6.83e-12!29;UBERON:0003081!3.32e-11!88;UBERON:0000072!2.34e-10!27;UBERON:0003408!4.61e-10!24;UBERON:0005057!8.42e-10!51;UBERON:0006562!8.69e-10!24;UBERON:0001557!8.69e-10!24;UBERON:0001042!8.69e-10!24;UBERON:0008814!8.69e-10!24;UBERON:0009145!8.69e-10!24;UBERON:0002370!1.20e-09!23;UBERON:0000974!1.20e-09!23;UBERON:0004807!1.20e-09!23;UBERON:0005058!1.20e-09!23;UBERON:0003351!1.20e-09!23;UBERON:0009113!1.20e-09!23;UBERON:0003295!1.20e-09!23;UBERON:0009722!1.20e-09!23;UBERON:0005562!1.20e-09!23;UBERON:0007690!1.20e-09!23;UBERON:0001004!2.66e-09!42;UBERON:0000065!6.50e-09!41;UBERON:0002371!7.48e-09!16;UBERON:0001474!1.28e-08!22;UBERON:0004765!1.28e-08!22;UBERON:0001434!1.28e-08!22;UBERON:0002204!1.29e-08!32;UBERON:0000077!1.51e-07!97;UBERON:0000063!1.85e-07!35;UBERON:0000926!1.95e-07!193;UBERON:0004120!1.95e-07!193;UBERON:0006603!1.95e-07!193;UBERON:0001041!4.61e-07!92 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.05e-35,45;UBERON:0003061,1.05e-35,45;UBERON:0002193,9.32e-35,48;UBERON:0002405,9.32e-35,48;UBERON:0002384,4.48e-25,46;UBERON:0004177,1.60e-21,29;UBERON:0005057,1.60e-21,29;UBERON:0003081,8.75e-21,87;UBERON:0000077,8.83e-20,35;UBERON:0003408,4.66e-19,24;UBERON:0002370,2.81e-18,23;UBERON:0000974,2.81e-18,23;UBERON:0004807,2.81e-18,23;UBERON:0005058,2.81e-18,23;UBERON:0003351,2.81e-18,23;UBERON:0009113,2.81e-18,23;UBERON:0003295,2.81e-18,23;UBERON:0009722,2.81e-18,23;UBERON:0005562,2.81e-18,23;UBERON:0007690,2.81e-18,23;UBERON:0006562,3.08e-17,24;UBERON:0001557,3.08e-17,24;UBERON:0001042,3.08e-17,24;UBERON:0008814,3.08e-17,24;UBERON:0009145,3.08e-17,24;UBERON:0000072,6.56e-16,27;UBERON:0002371,3.41e-14,16;UBERON:0001474,2.53e-13,22;UBERON:0004765,2.53e-13,22;UBERON:0001434,2.53e-13,22;UBERON:0000926,9.44e-13,120;UBERON:0004120,9.44e-13,120;UBERON:0006603,9.44e-13,120;UBERON:0001004,1.12e-10,42;UBERON:0007811,1.82e-10,36;UBERON:0002204,1.94e-10,32;UBERON:0000065,4.69e-10,41;UBERON:0000153,9.22e-08,43;UBERON:0001041,3.09e-07,80 | |||
|phase1_expression=0.320297694209588,0.348975407639361,0,0,0,0.33575854382378,0.467225281191051,3.22808308603941,5.20918271961167,5.85161315804984,13.0125655851384,10.1310641924077,2.9104124088305,4.28359971853087,1.99865857089398,3.44207954562704,1.39912375625629,5.67831897644828,5.89592064504677,7.63901373236454,0.425216450755349,8.14185799847259,4.96279599363977,0.639969691173627,0.45881856213434,0,0,0.215471232685889,0,0.504060259519861,0,3.17515336729816,0.61506478758457,0,0,0,0,0.418531630736908,0.7813353445238,0,0,0,0,0.629484089877886,1.11514624341466,0.917733760808408,0,0.218025156380447,0,0.388859798148567,0.699932108126813,0,16.9460432118314,13.7818806982155,9.74672017513146,1.28629718017973,1.43266719969378,0.515672092277442,0,0,0,0.338844532069132,0,2.2497492932035,1.97773272513395,4.9733608046227,1.49800055259202,0.384218305321555,0,0.135005938331691,0,0,0,0,0,0,0,0.255374676170375,0.153606533256243,0,0,0,0,0,0,0,0,0,0.454357159999104,0.68014404096107,0,0.860423876981386,0.679971333707751,0,0,0,1.12355536105401,7.15807354827843,7.01422212427746,4.59341446863442,0.14084341977668,2.56652954828636,0,0,0.649473123033642,0.760079596425296,1.01104889002957,0.68510327831436,3.6251303710604,0.148442139064825,0.346970653532272,0.608930956624282,0.230615497256059,0.301445281105245,0.117588707135705,0,0.247194967734374,1.44599356919912,1.76922110389975,0.161766849947409,1.76673214768315,1.45462575940567,0,0.292780797011547,0.209446706813455,0.255457055208591,7.90779821739074,1.19980546198682,4.44745794755726,0.299581278809645,0,0,0.347648640384553,0.255715457330331,0,0.324482526135515,0.203678727700633,1.36847667671102,0,0.841767423545896,0,0,0,0,0.0680364991513279,0.12811372028485,0.187403449119458,0.258703370739016,0.215567992932842,0,0.175951124163949,0.43839146485515,0.556094498451196,0,0,0.199034266818493,2.80885274925294,3.3455227924913,4.54661599032948,0,0,0,0,0,0,0,0,0.116765342367169,0,0.32833492815819,0.324275238183423,0,0.439100230582101,0.536825675041487,0,0,0,0,0,0.464473343720877,0,0,0,0,0,0.164698954724011,0.502670417600539,0.198956472041151,0.38992817423824,0,0,0,0,0.685491075658373,0,0,0,0.0701358198903186,0.189709611372772,0,0.156998727841375,0,0.296452627087149,1.50160595144485,0.393117990226406,0.899448449539415,0.405720242777006,0.964708639009667,0.763877555344259,1.72617682470486,0.972811360650212,0.823684239564244,1.43768206527355,1.11642284300551,0,0.757736633841335,0,0,1.10851914099963,0.189491411770485,0.162964976442026,0.339490171550376,0.234690248288502,0.167506257441816,0.238043640886014,0.390267295715598,0.315270288212382,0.664394068946325,0.637819074629948,1.63863314715738,0.172684981865896,0.144649058581512,1.50791283939272,8.70249094109935,0.491764273019036,1.10374698521893,0.321101179975584,0.117211686592203,2.95082901678016,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0,0.659880491890142,0,0,0,0,0.295301892880773,0,0,0.363533729477506,0,0.316036757935816,1.05418608574999,0,0.340439605753788,0.18006109403131,0,0,0.354680467284547,0.178368817602071,0.329098041204242,0.304464949114599,2.58138878870081,0.21183207086382,0,0.49465875882444,0.484393280087717,0.542816324353403,0.119372344003136,0.984845398470368,0.582961673259701,0.370850604021019,2.39219233116994,0.412773735926445,1.66675074632741,2.63715839806567,2.46049609897845,2.28778173206523,8.15896463970505,8.25713568709582,8.84479832348312,0,0.158167996790568,0,0.972048067396211,0.627264888043406,0.87345025498471,0.269728692769641,0.578574190077352,0.26175594198403,0.129614973291793,1.86401793926078,0,0.299033092087958,0,0.194451188344048,0.129159823477731,0,0,0.13020438484395,0.209718688851422,0.241584120826006,0.288030006257865,2.21207784439725,1.41907650703115,3.08132871494482,4.54722880422283,4.11761400035207,2.38417625737518,2.88469078847925,2.80610101631697,2.01932899896295,1.905170166375,1.81487133246313,2.0466154955348,1.73181314952593,1.28564592399726,0.680191150845634,0,0,0.167884616364078,0.772758376128762,1.68914227906064,0.36630324853453,3.42989406526505,0,0,0,0,0.171853182343688,0,0.755393897389701,0,0,0.453142408984205,0.51776031175182,0.207574695168353,0.798049746802062,0.341467211508268,0.972426868273176,0.838452650511929,0.183843508450014,0,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0.187283014939765,0.384150914429216,0.0574354689556133,0.476293691283074,0.347652977834566,0.192909220463705,0,0.147198920134397,0.342869252385415,0,0.476872379894642,0.145346416632329,0.282328141245992,0.25384382367503,0.182927972872773,0,0,0,0.355905054372522,0.394017929502254,0,0.154936841185966,0.385813221962283,0.249810577937946,0.467863216890817,0.214871054048298,0.765153328275374,1.10295709559758,0.231867835620421 | |phase1_expression=0.320297694209588,0.348975407639361,0,0,0,0.33575854382378,0.467225281191051,3.22808308603941,5.20918271961167,5.85161315804984,13.0125655851384,10.1310641924077,2.9104124088305,4.28359971853087,1.99865857089398,3.44207954562704,1.39912375625629,5.67831897644828,5.89592064504677,7.63901373236454,0.425216450755349,8.14185799847259,4.96279599363977,0.639969691173627,0.45881856213434,0,0,0.215471232685889,0,0.504060259519861,0,3.17515336729816,0.61506478758457,0,0,0,0,0.418531630736908,0.7813353445238,0,0,0,0,0.629484089877886,1.11514624341466,0.917733760808408,0,0.218025156380447,0,0.388859798148567,0.699932108126813,0,16.9460432118314,13.7818806982155,9.74672017513146,1.28629718017973,1.43266719969378,0.515672092277442,0,0,0,0.338844532069132,0,2.2497492932035,1.97773272513395,4.9733608046227,1.49800055259202,0.384218305321555,0,0.135005938331691,0,0,0,0,0,0,0,0.255374676170375,0.153606533256243,0,0,0,0,0,0,0,0,0,0.454357159999104,0.68014404096107,0,0.860423876981386,0.679971333707751,0,0,0,1.12355536105401,7.15807354827843,7.01422212427746,4.59341446863442,0.14084341977668,2.56652954828636,0,0,0.649473123033642,0.760079596425296,1.01104889002957,0.68510327831436,3.6251303710604,0.148442139064825,0.346970653532272,0.608930956624282,0.230615497256059,0.301445281105245,0.117588707135705,0,0.247194967734374,1.44599356919912,1.76922110389975,0.161766849947409,1.76673214768315,1.45462575940567,0,0.292780797011547,0.209446706813455,0.255457055208591,7.90779821739074,1.19980546198682,4.44745794755726,0.299581278809645,0,0,0.347648640384553,0.255715457330331,0,0.324482526135515,0.203678727700633,1.36847667671102,0,0.841767423545896,0,0,0,0,0.0680364991513279,0.12811372028485,0.187403449119458,0.258703370739016,0.215567992932842,0,0.175951124163949,0.43839146485515,0.556094498451196,0,0,0.199034266818493,2.80885274925294,3.3455227924913,4.54661599032948,0,0,0,0,0,0,0,0,0.116765342367169,0,0.32833492815819,0.324275238183423,0,0.439100230582101,0.536825675041487,0,0,0,0,0,0.464473343720877,0,0,0,0,0,0.164698954724011,0.502670417600539,0.198956472041151,0.38992817423824,0,0,0,0,0.685491075658373,0,0,0,0.0701358198903186,0.189709611372772,0,0.156998727841375,0,0.296452627087149,1.50160595144485,0.393117990226406,0.899448449539415,0.405720242777006,0.964708639009667,0.763877555344259,1.72617682470486,0.972811360650212,0.823684239564244,1.43768206527355,1.11642284300551,0,0.757736633841335,0,0,1.10851914099963,0.189491411770485,0.162964976442026,0.339490171550376,0.234690248288502,0.167506257441816,0.238043640886014,0.390267295715598,0.315270288212382,0.664394068946325,0.637819074629948,1.63863314715738,0.172684981865896,0.144649058581512,1.50791283939272,8.70249094109935,0.491764273019036,1.10374698521893,0.321101179975584,0.117211686592203,2.95082901678016,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0,0.659880491890142,0,0,0,0,0.295301892880773,0,0,0.363533729477506,0,0.316036757935816,1.05418608574999,0,0.340439605753788,0.18006109403131,0,0,0.354680467284547,0.178368817602071,0.329098041204242,0.304464949114599,2.58138878870081,0.21183207086382,0,0.49465875882444,0.484393280087717,0.542816324353403,0.119372344003136,0.984845398470368,0.582961673259701,0.370850604021019,2.39219233116994,0.412773735926445,1.66675074632741,2.63715839806567,2.46049609897845,2.28778173206523,8.15896463970505,8.25713568709582,8.84479832348312,0,0.158167996790568,0,0.972048067396211,0.627264888043406,0.87345025498471,0.269728692769641,0.578574190077352,0.26175594198403,0.129614973291793,1.86401793926078,0,0.299033092087958,0,0.194451188344048,0.129159823477731,0,0,0.13020438484395,0.209718688851422,0.241584120826006,0.288030006257865,2.21207784439725,1.41907650703115,3.08132871494482,4.54722880422283,4.11761400035207,2.38417625737518,2.88469078847925,2.80610101631697,2.01932899896295,1.905170166375,1.81487133246313,2.0466154955348,1.73181314952593,1.28564592399726,0.680191150845634,0,0,0.167884616364078,0.772758376128762,1.68914227906064,0.36630324853453,3.42989406526505,0,0,0,0,0.171853182343688,0,0.755393897389701,0,0,0.453142408984205,0.51776031175182,0.207574695168353,0.798049746802062,0.341467211508268,0.972426868273176,0.838452650511929,0.183843508450014,0,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0.187283014939765,0.384150914429216,0.0574354689556133,0.476293691283074,0.347652977834566,0.192909220463705,0,0.147198920134397,0.342869252385415,0,0.476872379894642,0.145346416632329,0.282328141245992,0.25384382367503,0.182927972872773,0,0,0,0.355905054372522,0.394017929502254,0,0.154936841185966,0.385813221962283,0.249810577937946,0.467863216890817,0.214871054048298,0.765153328275374,1.10295709559758,0.231867835620421 | ||
|short_description=p5@Rcc2 | |short_description=p5@Rcc2 | ||
}} | }} |
Latest revision as of 15:01, 26 September 2015
Short description: | p5@Rcc2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Rcc2_5end |
Coexpression cluster: | MCL_coexpression_mm9:3463 |
Association with transcript: | -11bp_to_ENSMUST00000071169_5end |
EntrezGene: | Rcc2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data