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FFCP PHASE1:Mm9::chr9:44789930..44789947,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=12500
|EntrezGene=12500
|HGNC=
|HGNC=
|MCL_coexpression_id=33
|TSSclassifier=NA
|UniProt=P04235
|UniProt=P04235
|association_with_transcript=54bp_to_ENSMUST00000034602_5end
|association_with_transcript=54bp_to_ENSMUST00000034602_5end
|cluster_id=chr9:44789930..44789947,+
|description=CAGE_peak_2_at_Cd3d_5end
|description=CAGE_peak_2_at_Cd3d_5end
|id=chr9:44789930..44789947,+
|id=chr9:44789930..44789947,+
|ontology_enrichment_celltype=CL:0000791!2.15e-09!9;CL:0000789!2.15e-09!9;CL:0002420!2.15e-09!9;CL:0002419!2.15e-09!9;CL:0000790!2.15e-09!9;CL:0000624!1.69e-08!8;CL:0000838!2.54e-07!12;CL:0000084!5.25e-07!11;CL:0000827!5.25e-07!11
|ontology_enrichment_celltype=CL:0000791!2.15e-09!9;CL:0000789!2.15e-09!9;CL:0002420!2.15e-09!9;CL:0002419!2.15e-09!9;CL:0000790!2.15e-09!9;CL:0000624!1.69e-08!8;CL:0000838!2.54e-07!12;CL:0000084!5.25e-07!11;CL:0000827!5.25e-07!11
|ontology_enrichment_celltype_v019_2=CL:0000791,7.18e-17,9;CL:0000789,7.18e-17,9;CL:0002420,7.18e-17,9;CL:0002419,7.18e-17,9;CL:0000790,7.18e-17,9;CL:0000624,4.00e-15,8;CL:0000084,2.19e-13,11;CL:0000827,2.19e-13,11;CL:0000838,4.41e-12,12;CL:0000893,1.40e-11,6;CL:0002489,1.40e-11,6;CL:0000898,1.40e-11,6;CL:0000809,1.40e-11,6;CL:0000810,1.40e-11,6;CL:0000895,1.40e-11,6;CL:0000808,1.40e-11,6;CL:0000894,1.40e-11,6;CL:0000806,1.40e-11,6;CL:0000807,1.40e-11,6;CL:0000805,1.40e-11,6;CL:0002425,1.40e-11,6;CL:0002436,1.40e-11,6;CL:0002427,1.40e-11,6;CL:0002428,1.40e-11,6;CL:0002429,1.40e-11,6;CL:0002433,1.40e-11,6;CL:0002431,1.40e-11,6;CL:0002432,1.40e-11,6;CL:0000542,5.58e-11,13;CL:0000051,5.58e-11,13;CL:0002031,7.53e-10,25;CL:0000738,6.96e-08,17;CL:0002087,6.96e-08,17;CL:0000988,5.66e-07,32;CL:0002032,5.66e-07,32;CL:0000037,5.66e-07,32;CL:0000837,5.66e-07,32
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004177!7.42e-17!29;UBERON:0003408!5.12e-15!24;UBERON:0002370!1.22e-14!23;UBERON:0000974!1.22e-14!23;UBERON:0004807!1.22e-14!23;UBERON:0005058!1.22e-14!23;UBERON:0003351!1.22e-14!23;UBERON:0009113!1.22e-14!23;UBERON:0003295!1.22e-14!23;UBERON:0009722!1.22e-14!23;UBERON:0005562!1.22e-14!23;UBERON:0007690!1.22e-14!23;UBERON:0002193!1.05e-13!48;UBERON:0006562!1.22e-13!24;UBERON:0001557!1.22e-13!24;UBERON:0001042!1.22e-13!24;UBERON:0008814!1.22e-13!24;UBERON:0009145!1.22e-13!24;UBERON:0001004!2.08e-12!42;UBERON:0002390!4.27e-12!45;UBERON:0003061!4.27e-12!45;UBERON:0000065!5.21e-12!41;UBERON:0000072!4.08e-11!27;UBERON:0005057!6.26e-10!51;UBERON:0002405!1.14e-09!70;UBERON:0001007!8.30e-09!128;UBERON:0001555!8.30e-09!128;UBERON:0007026!8.30e-09!128;UBERON:0004119!8.89e-09!130;UBERON:0000925!8.89e-09!130;UBERON:0006595!8.89e-09!130;UBERON:0000077!2.13e-08!97;UBERON:0001041!3.16e-08!92;UBERON:0000063!3.25e-08!35;UBERON:0004921!3.96e-08!126;UBERON:0004185!3.96e-08!126;UBERON:0003081!8.12e-07!88;UBERON:0005911!9.54e-07!69
|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.12e-31,29;UBERON:0005057,1.12e-31,29;UBERON:0002370,4.89e-29,23;UBERON:0000974,4.89e-29,23;UBERON:0004807,4.89e-29,23;UBERON:0005058,4.89e-29,23;UBERON:0003351,4.89e-29,23;UBERON:0009113,4.89e-29,23;UBERON:0003295,4.89e-29,23;UBERON:0009722,4.89e-29,23;UBERON:0005562,4.89e-29,23;UBERON:0007690,4.89e-29,23;UBERON:0006562,1.43e-27,24;UBERON:0003408,1.43e-27,24;UBERON:0001557,1.43e-27,24;UBERON:0001042,1.43e-27,24;UBERON:0008814,1.43e-27,24;UBERON:0009145,1.43e-27,24;UBERON:0002390,2.87e-25,45;UBERON:0003061,2.87e-25,45;UBERON:0002193,3.58e-25,48;UBERON:0002405,3.58e-25,48;UBERON:0000077,5.21e-25,35;UBERON:0000072,7.90e-24,27;UBERON:0000065,1.38e-23,41;UBERON:0001004,7.64e-23,42;UBERON:0007811,2.25e-16,36;UBERON:0000153,9.14e-13,43;UBERON:0004921,1.39e-12,114;UBERON:0001041,1.89e-12,80;UBERON:0001007,3.37e-12,116;UBERON:0001555,3.37e-12,116;UBERON:0007026,3.37e-12,116;UBERON:0004119,7.94e-12,118;UBERON:0000925,7.94e-12,118;UBERON:0006595,7.94e-12,118;UBERON:0005911,4.74e-11,69;UBERON:0003081,3.74e-10,87;UBERON:0003929,9.03e-09,55;UBERON:0002368,1.34e-07,60;UBERON:0002530,2.23e-07,65;UBERON:0000490,3.70e-07,66;UBERON:0000949,7.59e-07,72
|phase1_expression=0,0,0,0,0,0,0,119.051704213133,121.64145593904,91.2851652655775,37.1542991049346,14.9173937321279,124.97653284978,108.750980609233,0.999329285446988,2.02475267389826,0,11.6721001182548,12.3402990245165,5.94145512517242,1.53077922271926,0,0,0.799962113967033,0.91763712426868,0,0,0,2.09025761402011,3.2763916868791,2.88249663851896,0,0,0,0,0.166234645358492,0,0.418531630736908,0,1.0470474879476,1.76469446409304,1.36609096991689,0.485510353031154,0,0,0,0,0,0,0,0,0,0.503347818173209,98.6492513135428,93.0979823624625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0.649776417447669,0,1.54488862144927,0,0,0,0,0,0,0,0,0,0,2.62622923353838,26.6706020156587,0.890652834388949,0,0,0,0.150722640552623,0,0,0,0.433798070759735,1.76922110389975,0,0.441683036920787,0,0,0,0,3.32094171771169,0,0.599902730993408,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0.210441855886474,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0.787056926989615,0,0,0,0.934122738937356,0,0.656669856316381,0.405344047729279,0.438599962275997,0.219550115291051,0,0,0,6.93879444265976,0.528901133327089,0,0,0.38660238396628,0,0,0,0,0,0,1.1937388322469,0.38992817423824,0,1.08069024937347,1.1948476395262,0,0,0,0,0,0,0.0632365371242573,0.147610147979602,0,0.123397163921801,0.889357881261447,0,0,0,0,0,0,0,0,0,0,0.744281895337007,0.624075346229121,0.505157755894224,0.538192240565737,0,2.77129785249907,0,0,0.169745085775188,0,1.50755631697634,0,0,0.630540576424764,0.221464689648775,1.2756381492599,3.27726629431476,2.59027472798843,1.44649058581512,0,0,0.983528546038072,1.37968373152366,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0.329940245945071,0,0,0.302323556964751,0,0,0,0,0,0.356497378384721,1.8962205476149,0,1.03135543248187,0.340439605753788,0,0,0,0,0,0,0,0.23467170806371,0,0,0.8244312647074,0.322928853391811,0.120625849856312,0.477489376012546,0.492422699235184,0,0,5.46786818553129,0,0.740778109478847,1.88368457004691,4.51090951479383,4.57556346413045,0,0,0,0,0,0,0,0,0.218362563746178,0.269728692769641,0.165306911450672,0,0.259229946583586,0.621339313086926,0,0,0,0,0,0.168956125490778,0,0,0.104859344425711,0,0,82.1628913633263,16.8261928690836,58.853378455446,87.1768722181005,65.8818240056332,74.9028707525369,59.4967475123846,62.0296014133224,62.4982325179034,63.5564767502699,64.5287584875779,64.7120328111956,65.8088996819854,75.8531095158382,0,0,0,0,0.386379188064381,0.187682475451182,0,0.428736758158132,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0.209613162627982,0,0,0.206035057238894,0.64183841918363,0,0,0.188626341386076,0,0.256100609619477,0.229741875822453,0,0.579421629724277,0.192909220463705,0,0.441596760403192,0.342869252385415,0.354951612318675,0,0.290692833264657,0,0.338458431566706,0,0.263069711437843,0.679020569229309,0,0,0.394017929502254,0,0.464810523557898,0.578719832943424,0,0.701794825336225,0,0,0,0.231867835620421
|phase1_expression=0,0,0,0,0,0,0,119.051704213133,121.64145593904,91.2851652655775,37.1542991049346,14.9173937321279,124.97653284978,108.750980609233,0.999329285446988,2.02475267389826,0,11.6721001182548,12.3402990245165,5.94145512517242,1.53077922271926,0,0,0.799962113967033,0.91763712426868,0,0,0,2.09025761402011,3.2763916868791,2.88249663851896,0,0,0,0,0.166234645358492,0,0.418531630736908,0,1.0470474879476,1.76469446409304,1.36609096991689,0.485510353031154,0,0,0,0,0,0,0,0,0,0.503347818173209,98.6492513135428,93.0979823624625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0.649776417447669,0,1.54488862144927,0,0,0,0,0,0,0,0,0,0,2.62622923353838,26.6706020156587,0.890652834388949,0,0,0,0.150722640552623,0,0,0,0.433798070759735,1.76922110389975,0,0.441683036920787,0,0,0,0,3.32094171771169,0,0.599902730993408,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0.210441855886474,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0.787056926989615,0,0,0,0.934122738937356,0,0.656669856316381,0.405344047729279,0.438599962275997,0.219550115291051,0,0,0,6.93879444265976,0.528901133327089,0,0,0.38660238396628,0,0,0,0,0,0,1.1937388322469,0.38992817423824,0,1.08069024937347,1.1948476395262,0,0,0,0,0,0,0.0632365371242573,0.147610147979602,0,0.123397163921801,0.889357881261447,0,0,0,0,0,0,0,0,0,0,0.744281895337007,0.624075346229121,0.505157755894224,0.538192240565737,0,2.77129785249907,0,0,0.169745085775188,0,1.50755631697634,0,0,0.630540576424764,0.221464689648775,1.2756381492599,3.27726629431476,2.59027472798843,1.44649058581512,0,0,0.983528546038072,1.37968373152366,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0.329940245945071,0,0,0.302323556964751,0,0,0,0,0,0.356497378384721,1.8962205476149,0,1.03135543248187,0.340439605753788,0,0,0,0,0,0,0,0.23467170806371,0,0,0.8244312647074,0.322928853391811,0.120625849856312,0.477489376012546,0.492422699235184,0,0,5.46786818553129,0,0.740778109478847,1.88368457004691,4.51090951479383,4.57556346413045,0,0,0,0,0,0,0,0,0.218362563746178,0.269728692769641,0.165306911450672,0,0.259229946583586,0.621339313086926,0,0,0,0,0,0.168956125490778,0,0,0.104859344425711,0,0,82.1628913633263,16.8261928690836,58.853378455446,87.1768722181005,65.8818240056332,74.9028707525369,59.4967475123846,62.0296014133224,62.4982325179034,63.5564767502699,64.5287584875779,64.7120328111956,65.8088996819854,75.8531095158382,0,0,0,0,0.386379188064381,0.187682475451182,0,0.428736758158132,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0.209613162627982,0,0,0.206035057238894,0.64183841918363,0,0,0.188626341386076,0,0.256100609619477,0.229741875822453,0,0.579421629724277,0.192909220463705,0,0.441596760403192,0.342869252385415,0.354951612318675,0,0.290692833264657,0,0.338458431566706,0,0.263069711437843,0.679020569229309,0,0,0.394017929502254,0,0.464810523557898,0.578719832943424,0,0.701794825336225,0,0,0,0.231867835620421
|short_description=p2@Cd3d
|short_description=p2@Cd3d
}}
}}

Latest revision as of 17:20, 26 September 2015

Short description:p2@Cd3d
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Cd3d_5end
Coexpression cluster:MCL_coexpression_mm9:33
Association with transcript: 54bp_to_ENSMUST00000034602_5end
EntrezGene:Cd3d
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Cd3d

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E9119.05
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7121.64
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F291.29
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E637.15
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F114.92
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E4124.98
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E8108.75
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.02
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A211.67
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A412.34
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A65.94
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.53
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B92.09
Ileum epithelium, pool2.CNhs13232.10253-104C13.28
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.88
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.50
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I998.65
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A193.10
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.54
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.63
accessory axillary lymph node, adult.CNhs10475.1063-29H926.67
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H73.32
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.93
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.41
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I36.94
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E31.08
intestine, neonate N30.CNhs11131.1384-42G11.19
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B12.77
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A61.51
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E61.28
lung, neonate N20.CNhs11109.822-18A43.28
lung, neonate N25.CNhs11119.1359-25C72.59
lung, neonate N30.CNhs11133.1394-42H21.45
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H21.38
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B61.90
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G25.47
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D11.88
spleen, neonate N20.CNhs11112.824-19H14.51
spleen, neonate N25.CNhs11099.1354-25G34.58
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B582.16
thymus, embryo E14.CNhs11041.402-44I416.83
thymus, embryo E15.CNhs11005.430-45I258.85
thymus, embryo E16.CNhs11002.456-26C587.18
thymus, embryo E17.CNhs10581.478-18C165.88
thymus, embryo E18.CNhs10595.1273-19G474.90
thymus, neonate N02.CNhs11181.1541-43F859.50
thymus, neonate N03.CNhs11137.2104-43C762.03
thymus, neonate N06.CNhs11197.681-26C462.50
thymus, neonate N07.CNhs11211.713-19D363.56
thymus, neonate N10.CNhs11194.748-24E464.53
thymus, neonate N20.CNhs11186.820-7A264.71
thymus, neonate N25.CNhs11125.1362-25G765.81
thymus, neonate N30.CNhs11132.1393-42G275.85
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
mature alpha-beta T cell7.18e-179
alpha-beta T cell7.18e-179
immature T cell7.18e-179
mature T cell7.18e-179
immature alpha-beta T cell7.18e-179
CD4-positive, alpha-beta T cell4.00e-158
T cell2.19e-1311
pro-T cell2.19e-1311
lymphoid lineage restricted progenitor cell4.41e-1212
thymocyte1.40e-116
double negative thymocyte1.40e-116
naive T cell1.40e-116
double-positive, alpha-beta thymocyte1.40e-116
CD4-positive, alpha-beta thymocyte1.40e-116
naive thymus-derived CD4-positive, alpha-beta T cell1.40e-116
DN4 thymocyte1.40e-116
DN1 thymic pro-T cell1.40e-116
DN2 thymocyte1.40e-116
DN3 thymocyte1.40e-116
immature single positive thymocyte1.40e-116
early T lineage precursor1.40e-116
mature CD4 single-positive thymocyte1.40e-116
resting double-positive thymocyte1.40e-116
double-positive blast1.40e-116
CD69-positive double-positive thymocyte1.40e-116
CD69-positive, CD4-positive single-positive thymocyte1.40e-116
CD4-positive, CD8-intermediate double-positive thymocyte1.40e-116
CD24-positive, CD4 single-positive thymocyte1.40e-116
lymphocyte5.58e-1113
common lymphoid progenitor5.58e-1113
hematopoietic lineage restricted progenitor cell7.53e-1025
leukocyte6.96e-0817
nongranular leukocyte6.96e-0817
hematopoietic cell5.66e-0732
hematopoietic oligopotent progenitor cell5.66e-0732
hematopoietic stem cell5.66e-0732
hematopoietic multipotent progenitor cell5.66e-0732

Uber anatomy
Ontology termp-valuen
hemopoietic organ1.12e-3129
immune organ1.12e-3129
thymus4.89e-2923
neck4.89e-2923
respiratory system epithelium4.89e-2923
hemolymphoid system gland4.89e-2923
pharyngeal epithelium4.89e-2923
thymic region4.89e-2923
pharyngeal gland4.89e-2923
entire pharyngeal arch endoderm4.89e-2923
thymus primordium4.89e-2923
early pharyngeal endoderm4.89e-2923
pharynx1.43e-2724
gland of gut1.43e-2724
upper respiratory tract1.43e-2724
chordate pharynx1.43e-2724
pharyngeal arch system1.43e-2724
pharyngeal region of foregut1.43e-2724
hematopoietic system2.87e-2545
blood island2.87e-2545
hemolymphoid system3.58e-2548
immune system3.58e-2548
mixed endoderm/mesoderm-derived structure5.21e-2535
segment of respiratory tract7.90e-2427
respiratory tract1.38e-2341
respiratory system7.64e-2342
craniocervical region2.25e-1636
anterior region of body9.14e-1343
subdivision of digestive tract1.39e-12114
foregut1.89e-1280
digestive system3.37e-12116
digestive tract3.37e-12116
primitive gut3.37e-12116
endoderm-derived structure7.94e-12118
endoderm7.94e-12118
presumptive endoderm7.94e-12118
endo-epithelium4.74e-1169
lateral plate mesoderm3.74e-1087
gut epithelium9.03e-0955
endocrine gland1.34e-0760
gland2.23e-0765
unilaminar epithelium3.70e-0766
endocrine system7.59e-0772
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