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{{f5samples
{{f5samples
|id=FF:12209-129D4
|DRA_sample_Accession=RNA-Seq@SAMD00013675
|name=CD19+ B Cells (pluriselect), donor090612, donation2
|accession_numbers=CAGE;DRX008056;DRR008928;DRZ000353;DRZ001738;DRZ011703;DRZ013088!RNA-Seq;DRX012345;DRR013793;DRZ002994;
|sample_id=12209
|ancestors_in_anatomy_facet=
|rna_tube_id=129D4
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0002371,CL:0000542,CL:0000219,CL:0000945,CL:0000738,CL:0002087,CL:0002242,CL:0000255,CL:0000236
|rna_box=129
|rna_position=D4
|sample_cell_lot=090612-03
|sample_cell_catalog=
|sample_company=
|rna_lot_number=
|rna_catalog_number=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=
|sample_tissue=blood
|sample_donor(cell lot)=
|sample_sex=
|sample_age=
|sample_ethnicity=
|rna_rin=
|rna_od260/230=0.64
|rna_od260/280=1.98
|sample_cell_type=b cell
|sample_cell_line=
|sample_collaboration=Matched_genome_OSC(contact:Al Forrest)
|sample_experimental_condition=
|sample_disease=
|rna_sample_type=
|rna_extraction_protocol=
|rna_weight_ug=2.15973
|rna_concentration=0.07999
|sample_note=
|profile_hcage=CNhs12185,LSID975,release011,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000037,CL:0000048,CL:0000051,CL:0000063,CL:0000134,CL:0000144,CL:0000219,CL:0000236,CL:0000255,CL:0000542,CL:0000548,CL:0000566,CL:0000723,CL:0000738,CL:0000826,CL:0000837,CL:0000838,CL:0000945,CL:0000988,CL:0002031,CL:0002032,CL:0002087,CL:0002320,CL:0002371
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000465,UBERON:0000479,UBERON:0001062,UBERON:0002384
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000025
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chr16:85932760..85932775,+!p1@IRF8!2.54!343.08!IRF8;;chr19:50922187..50922204,+!p1@SPIB!2.46!288.22!SPIB;;chr2:100759010..100759035,-!p1@AFF3!2.39!243.26!AFF3;;chr11:111249993..111250006,-!p1@POU2AF1!2.35!224.76!POU2AF1;;chr11:47400078..47400106,-!p1@SPI1!2.12!129.56!SPI1;;chr6:391743..391759,+!p1@IRF4!2.09!122.95!IRF4;;chr2:231090433..231090469,+!p1@SP140!2.07!117.67!SP140;;chr2:100759037..100759058,-!p2@AFF3!2.06!114.36!AFF3;;chr6:91006518..91006570,-!p1@BACH2!2.04!239.96!BACH2;;chr2:231090471..231090504,+!p2@SP140!1.95!87.92!SP140;;chr17:38020392..38020477,-!p1@IKZF3!1.89!76.68!IKZF3;;chr5:88178983..88179012,-!p1@MEF2C!1.82!476.61!MEF2C;;chr2:68592406..68592424,+!p1@PLEK!1.77!57.51!PLEK;;chr2:100758991..100759009,-!p3@AFF3!1.76!56.85!AFF3;;chr8:86099884..86099918,+!p4@E2F5!1.76!56.19!E2F5;;chr3:71355163..71355209,-!p5@FOXP1!1.74!74.70!FOXP1;;chr6:91006575..91006602,-!p2@BACH2!1.72!75.36!BACH2;;chr3:32023232..32023273,+!p1@ZNF860!1.69!68.09!ZNF860;;chr2:60780607..60780624,-!p2@BCL11A!1.64!127.58!BCL11A;;chr19:16435625..16435682,+!p1@KLF2!1.59!1160.13!KLF2;;chr20:56195474..56195506,-!p1@ZBP1!1.58!37.02!ZBP1;;chr19:13213662..13213686,-!p1@LYL1!1.55!50.24!LYL1;;chr7:50344251..50344288,+!p3@IKZF1!1.55!34.37!IKZF1;;chr8:86089627..86089653,+!p3@E2F5!1.54!38.34!E2F5;;chr2:68592394..68592405,+!p2@PLEK!1.51!31.07!PLEK;;chr17:38020557..38020572,-!p4@IKZF3!1.51!31.07!IKZF3;;chr7:50343634..50343717,+!p2@IKZF1!1.50!30.41!IKZF1;;chr5:158526756..158526797,-!p3@EBF1!1.47!28.42!EBF1;;chr4:57522513..57522548,-!p4@HOPX!1.47!28.42!HOPX;;chr2:60781201..60781258,-!p3@BCL11A!1.46!27.76!BCL11A;;chr3:71409904..71409927,-!p46@FOXP1!1.44!26.44!FOXP1;;chr7:50344289..50344323,+!p1@IKZF1!1.44!26.44!IKZF1;;chr13:41593425..41593480,-!p1@ELF1!1.40!148.07!ELF1;;chr10:94449703..94449718,+!p1@HHEX!1.37!83.95!HHEX;;chr18:52989031..52989079,-!p2@TCF4!1.36!50.24!TCF4;;chr8:86089531..86089544,+!p7@E2F5!1.36!21.81!E2F5;;chr14:69262947..69262986,-!p3@ZFP36L1!1.35!25.78!ZFP36L1;;chr2:60778035..60778060,-!p4@BCL11A!1.35!25.78!BCL11A;;chr2:231090344..231090361,-!p3@SP110!1.29!18.51!SP110;;chr1:151319654..151319698,-!p2@RFX5!1.27!37.68!RFX5;;chr4:185395633..185395651,-!p2@IRF2!1.26!27.10!IRF2;;chr19:13213704..13213726,-!p3@LYL1!1.26!22.48!LYL1;;chr5:88179017..88179046,-!p2@MEF2C!1.24!64.78!MEF2C;;chr9:37034186..37034216,-!p2@PAX5!1.24!16.53!PAX5;;chr2:100759060..100759073,-!p8@AFF3!1.23!15.87!AFF3;;chr19:36391434..36391450,-!p1@NFKBID!1.22!30.41!NFKBID;;chr3:71631151..71631194,-!p15@FOXP1!1.21!17.19!FOXP1;;chr17:37934204..37934241,-!p3@IKZF3!1.21!15.20!IKZF3;;chr19:45579725..45579743,-!p1@ZNF296!1.18!62.80!ZNF296;;chr1:25256756..25256774,-!p1@RUNX3!1.17!25.78!RUNX3;;chr11:47400062..47400077,-!p2@SPI1!1.17!13.88!SPI1;;chr7:50348268..50348366,+!p4@IKZF1!1.15!13.22!IKZF1;;chr11:128563948..128564003,+!p1@FLI1!1.14!152.04!FLI1;;chr19:58220517..58220583,-!p1@ZNF154!1.13!39.66!ZNF154;;chr2:61108695..61108753,+!p1@REL!1.12!83.95!REL;;chr7:64838786..64838809,+!p2@ZNF92!1.12!69.41!ZNF92;;chr20:50159198..50159299,-!p1@NFATC2!1.12!17.85!NFATC2;;chr3:18486354..18486377,-!p2@SATB1!1.12!15.20!SATB1;;chr4:185395590..185395627,-!p3@IRF2!1.12!15.20!IRF2;;chr19:42636586..42636607,-!p1@POU2F2!1.10!32.39!POU2F2;;chr14:75988771..75988826,+!p1@BATF!1.09!15.20!BATF;;chr17:38020481..38020506,-!p7@IKZF3!1.09!11.24!IKZF3;;chr7:64126535..64126559,+!p2@ZNF107!1.07!23.14!ZNF107;;chr5:88179195..88179224,-!p3@MEF2C!1.07!17.19!MEF2C;;chr10:104154246..104154347,+!p3@NFKB2!1.06!64.12!NFKB2;;chr10:94449675..94449694,+!p2@HHEX!1.06!28.42!HHEX;;chr6:91006503..91006517,-!p3@BACH2!1.06!10.58!BACH2;;chr7:63505799..63505904,+!p1@ZNF727!1.06!10.58!ZNF727;;chr2:61108650..61108687,+!p2@REL!1.05!50.90!REL;;chr9:117150254..117150271,-!p1@AKNA!1.05!28.42!AKNA;;chr5:158526709..158526741,-!p7@EBF1!1.04!9.92!EBF1;;chr9:37027156..37027193,-!p4@PAX5!1.04!9.92!PAX5;;chr4:81104895..81104920,+!p2@PRDM8!1.03!14.54!PRDM8;;chr6:144385698..144385742,-!p2@PLAGL1!1.03!11.90!PLAGL1;;chr7:50343895..50343936,+!p5@IKZF1!1.01!9.25!IKZF1;;chr3:18487057..18487105,-!p4@SATB1!1.01!9.25!SATB1;;chr17:38020516..38020544,-!p5@IKZF3!1.01!9.25!IKZF3;;chr19:36204309..36204335,+!p1@ZBTB32!1.01!9.25!ZBTB32;;chr1:167298300..167298319,+!p2@POU2F1!1.01!9.25!POU2F1;;chr19:20748574..20748599,-!p1@ZNF737!1.00!54.87!ZNF737;;chr9:3525727..3525828,-!p2@RFX3!0.99!23.14!RFX3;;chrX:106960180..106960197,-!p2@TSC22D3!0.98!33.71!TSC22D3;;chr21:36421535..36421610,-!p2@RUNX1!0.98!31.07!RUNX1;;chr9:37003148..37003152,-!p5@PAX5!0.98!8.59!PAX5;;chr8:86089498..86089519,+!p6@E2F5!0.98!8.59!E2F5;;chr17:38020607..38020621,-!p9@IKZF3!0.98!8.59!IKZF3;;chr19:22193731..22193751,-!p1@ZNF208!0.98!8.59!ZNF208;;chr14:69263043..69263069,-!p8@ZFP36L1!0.98!8.59!ZFP36L1;;chrX:106960221..106960236,-!p3@TSC22D3!0.97!23.80!TSC22D3;;chrX:101186981..101187030,-!p1@ZMAT1!0.96!27.10!ZMAT1;;chr2:231084659..231084721,-!p1@SP110!0.95!192.36!SP110;;chr19:11959532..11959593,+!p1@ZNF439!0.95!31.07!ZNF439;;chr6:157098579..157098634,+!p4@ARID1B!0.95!18.51!ARID1B;;chr7:128577972..128578047,+!p1@IRF5!0.95!12.56!IRF5;;chr9:37034258..37034270,-!p3@PAX5!0.95!7.93!PAX5;;chr16:85936412..85936431,+!p2@IRF8!0.95!7.93!IRF8;;chr19:19779619..19779670,+!p1@ZNF101!0.93!21.81!ZNF101;;chrX:106960285..106960299,-!p1@TSC22D3!0.92!204.92!TSC22D3;;chr19:38085768..38085821,+!p1@ZNF540!0.92!11.24!ZNF540;;chr5:88120151..88120177,-!p6@MEF2C!0.92!7.27!MEF2C;;chr6:91006719..91006730,-!p5@BACH2!0.92!7.27!BACH2;;chr7:77469439..77469459,+!p6@PHTF2!0.92!7.27!PHTF2;;chr1:158978768..158978800,+!p8@IFI16!0.92!7.27!IFI16;;chr7:77428066..77428132,+!p2@PHTF2!0.91!48.26!PHTF2;;chr16:68119324..68119364,+!p1@NFATC3!0.89!31.73!NFATC3;;chr14:64971288..64971316,-!p2@ZBTB25!0.89!21.81!ZBTB25;;chr2:231280954..231280965,+!p2@SP100!0.88!12.56!SP100;;chr19:53039233..53039247,+!p2@ZNF808!0.88!9.92!ZNF808;;chr17:37934188..37934202,-!p8@IKZF3!0.88!6.61!IKZF3;;chr17:45810594..45810608,+!p1@TBX21!0.88!6.61!TBX21;;chr10:94451574..94451587,+!p6@HHEX!0.88!6.61!HHEX;;chr14:69262916..69262929,-!p11@ZFP36L1!0.88!6.61!ZFP36L1;;chr1:158979686..158979745,+!p1@IFI16!0.86!217.48!IFI16;;chr3:129158768..129158819,-!p1@MBD4!0.86!100.48!MBD4;;chrX:131624056..131624069,-!p2@MBNL3!0.86!8.59!MBNL3;;chr8:81397846..81397860,+!p3@ZBTB10!0.86!7.93!ZBTB10;;chr19:11877805..11877832,+!p2@ZNF441!0.85!10.58!ZNF441;;chr18:52989001..52989030,-!p10@TCF4!0.84!6.61!TCF4;;chr17:56565257..56565283,-!p2@HSF5!0.84!5.95!HSF5;;chrX:56258900..56258917,+!p4@KLF8!0.84!5.95!KLF8;;chr20:56195525..56195556,-!p2@ZBP1!0.84!5.95!ZBP1;;chr2:100759076..100759088,-!p10@AFF3!0.84!5.95!AFF3;;chr3:71631217..71631234,-!p33@FOXP1!0.84!5.95!FOXP1;;chr2:145277640..145277771,-!p1@ZEB2!0.83!83.29!ZEB2;;chr13:41240737..41240787,-!p1@FOXO1!0.83!73.38!FOXO1;;chr1:14026671..14026705,+!p2@PRDM2!0.83!37.68!PRDM2;;chr11:128392085..128392232,-!p1@ETS1!0.82!203.60!ETS1;;chr1:158979680..158979683,+!p9@IFI16!0.82!7.93!IFI16;;chr19:9546177..9546224,-!p1@ZNF266!0.81!41.65!ZNF266;;chr4:185395191..185395226,-!p4@IRF2!0.81!7.93!IRF2;;chr2:208394817..208394834,+!p3@CREB1!0.80!23.14!CREB1;;chr16:3313791..3313834,+!p2@ZNF263!0.80!12.56!ZNF263;;chr19:57183114..57183145,-!p1@ZNF835!0.80!5.95!ZNF835;;chr20:56195449..56195459,-!p4@ZBP1!0.80!5.29!ZBP1;;chr19:13213954..13214021,-!p4@LYL1!0.80!5.29!LYL1;;chr7:115799942..115799955,-!p5@TFEC!0.80!5.29!TFEC;;chr13:41240717..41240735,-!p2@FOXO1!0.79!38.34!FOXO1;;chr20:46130672..46130686,+!p2@NCOA3!0.79!25.12!NCOA3;;chr2:178128250..178128293,-!p6@NFE2L2!0.79!13.88!NFE2L2;;chrX:106960249..106960260,-!p5@TSC22D3!0.79!8.59!TSC22D3;;chr3:71179699..71179744,-!p2@FOXP1!0.78!40.98!FOXP1;;chr7:64126503..64126528,+!p1@ZNF107!0.78!39.00!ZNF107;;chr2:208031542..208031595,-!p2@KLF7!0.78!38.34!KLF7;;chr19:49140609..49140643,-!p1@DBP!0.78!31.07!DBP;;chr19:58238958..58239000,-!p1@ZNF671!0.78!22.48!ZNF671;;chr16:88752889..88752921,-!p1@SNAI3!0.78!5.95!SNAI3;;chr11:128392273..128392308,-!p2@ETS1!0.76!21.81!ETS1;;chr17:42295777..42295816,-!p7@UBTF!0.76!5.95!UBTF;;chr14:74226961..74227020,-!p1@C14orf43!0.75!33.71!C14orf43;;chr6:41703296..41703367,-!p1@TFEB!0.75!25.78!TFEB;;chr2:60780753..60780800,-!p1@BCL11A!0.75!25.12!BCL11A;;chr14:64970670..64970712,-!p3@ZBTB25!0.75!10.58!ZBTB25;;chr19:47616992..47617011,-!p4@ZC3H4!0.75!10.58!ZC3H4;;chr8:41909982..41910009,-!p2@KAT6A!0.75!5.29!KAT6A;;chr7:150102756..150102772,+!p5@ZNF775!0.75!4.63!ZNF775;;chr7:50344144..50344157,+!p6@IKZF1!0.75!4.63!IKZF1;;chr7:97840743..97840786,+!p1@BHLHA15!0.75!4.63!BHLHA15;;chr12:54447637..54447659,+!p4@HOXC4!0.75!4.63!HOXC4;;chr3:71630844..71630862,-!p40@FOXP1!0.75!4.63!FOXP1;;chr3:71631248..71631268,-!p26@FOXP1!0.75!4.63!FOXP1;;chr14:73360799..73360817,-!p1@DPF3!0.73!16.53!DPF3;;chr19:52956798..52956843,+!p1@ZNF578!0.73!9.25!ZNF578;;chr16:89787937..89787971,+!p1@ZNF276!0.72!11.90!ZNF276;;chr2:185463247..185463263,+!p1@ZNF804A!0.72!7.93!ZNF804A;;chrX:56258811..56258838,+!p2@KLF8!0.72!5.95!KLF8;;chr7:28220354..28220441,-!p1@JAZF1!0.71!72.71!JAZF1;;chr7:64838754..64838778,+!p1@ZNF92!0.71!44.29!ZNF92;;chr19:58694742..58694800,+!p2@ZNF274!0.71!18.51!ZNF274;;chr16:71518504..71518542,-!p1@ZNF19!0.71!11.24!ZNF19;;chr7:64254834..64254854,+!p2@ZNF138!0.71!7.93!ZNF138;;chrX:56258844..56258882,+!p1@KLF8!0.71!5.95!KLF8;;chr8:81397820..81397836,+!p2@ZBTB10!0.71!5.29!ZBTB10;;chr13:74707894..74707947,-!p6@KLF12!0.71!4.63!KLF12;;chr5:131826457..131826514,-!p1@IRF1!0.70!181.79!IRF1;;chr1:249132410..249132456,+!p1@ZNF672!0.70!34.37!ZNF672;;chr19:9546227..9546257,-!p2@ZNF266!0.70!23.14!ZNF266;;chr19:11877838..11877915,+!p1@ZNF441!0.70!13.88!ZNF441;;chr18:42260920..42260951,+!p4@SETBP1!0.70!3.97!SETBP1;;chr1:14057463..14057496,+!p4@PRDM2!0.70!3.97!PRDM2;;chr1:161014760..161014788,-!p4@USF1!0.70!3.97!USF1;;chr2:60778062..60778075,-!p6@BCL11A!0.70!3.97!BCL11A;;chr4:57522476..57522500,-!p7@HOPX!0.70!3.97!HOPX;;chr11:128392258..128392264,-!p7@ETS1!0.70!3.97!ETS1;;chr11:47400045..47400060,-!p6@SPI1!0.70!3.97!SPI1;;chr6:41701898..41701939,-!p5@TFEB!0.70!3.97!TFEB;;chr7:115799916..115799932,-!p6@TFEC!0.70!3.97!TFEC;;chr7:21467674..21467727,+!p1@SP4!0.69!17.19!SP4;;chr19:22235279..22235301,+!p1@ZNF257!0.69!7.93!ZNF257;;chr19:19932513..19932569,-!p1@ZNF506!0.68!81.97!ZNF506;;chrX:131623044..131623089,-!p1@MBNL3!0.68!17.85!MBNL3;;chr11:615942..615957,-!p1@IRF7!0.67!40.32!IRF7;;chr8:123793860..123793921,+!p2@ZHX2!0.67!11.24!ZHX2;;chr1:10754477..10754517,-!p1@CASZ1!0.67!6.61!CASZ1;;chrX:131624020..131624048,-!p9@MBNL3!0.67!4.63!MBNL3;;chr4:87928142..87928165,+!p5@AFF1!0.66!13.88!AFF1;;chr19:23870007..23870022,-!p2@ZNF675!0.66!13.22!ZNF675;;chr6:106534192..106534224,+!p1@PRDM1!0.66!11.24!PRDM1;;chr11:67007522..67007533,+!p5@KDM2A!0.66!6.61!KDM2A;;chr19:16435523..16435619,+!p2@KLF2!0.66!5.29!KLF2;;chr19:49140595..49140607,-!p3@DBP!0.66!5.29!DBP;;chr18:42260030..42260055,+!p3@SETBP1!0.66!4.63!SETBP1;;chrX:101187036..101187056,-!p2@ZMAT1!0.66!3.97!ZMAT1;;chr4:81104865..81104886,+!p6@PRDM8!0.66!3.97!PRDM8;;chr2:231280908..231280945,+!p1@SP100!0.65!158.65!SP100;;chr14:58765217..58765301,+!p1@ARID4A!0.65!36.36!ARID4A;;chr6:130339710..130339745,+!p1@L3MBTL3!0.65!31.73!L3MBTL3;;chr10:43932296..43932360,+!p1@ZNF487P!0.65!7.93!ZNF487P;;chr2:231191875..231191918,+!p1@SP140L!0.64!38.34!SP140L;;chr19:53289995..53290050,-!p1@ZNF600!0.64!15.87!ZNF600;;chr19:58446721..58446779,-!p1@ZNF418!0.64!10.58!ZNF418;;chr2:148778973..148779035,+!p3@MBD5!0.64!9.92!MBD5;;chr16:30583169..30583200,-!p2@ZNF688!0.64!5.29!ZNF688;;chr4:57522166..57522260,-!p2@HOPX!0.64!3.97!HOPX;;chr10:63661437..63661465,+!p2@ARID5B!0.63!74.70!ARID5B;;chr7:139762641..139762768,-!p1@PARP12!0.63!52.88!PARP12;;chr19:57901208..57901280,+!p1@ZNF548!0.63!31.07!ZNF548;;chr18:77160282..77160343,+!p2@NFATC1!0.63!23.80!NFATC1;;chr11:65687158..65687216,+!p4@DRAP1!0.63!21.81!DRAP1;;chr19:53073532..53073551,+!p1@ZNF701!0.63!17.19!ZNF701;;chr6:28092375..28092412,+!p1@ZSCAN16!0.63!15.87!ZSCAN16;;chr19:58095501..58095535,+!p1@ZIK1!0.63!13.22!ZIK1;;chr2:231084639..231084654,-!p2@SP110!0.63!5.95!SP110;;chr20:44600199..44600219,-!p3@ZNF335!0.63!4.63!ZNF335;;chr4:81104958..81104981,+!p5@PRDM8!0.63!3.97!PRDM8;;chr1:14026722..14026733,+!p5@PRDM2!0.63!3.31!PRDM2;;chr20:56195509..56195520,-!p3@ZBP1!0.63!3.31!ZBP1;;chr17:37934138..37934150,-!p12@IKZF3!0.63!3.31!IKZF3;;chr11:47399947..47399961,-!p3@SPI1!0.63!3.31!SPI1;;chr13:41593493..41593506,-!p8@ELF1!0.63!3.31!ELF1;;chr6:41701581..41701613,-!p2@TFEB!0.63!3.31!TFEB;;chr8:86089662..86089671,+!p12@E2F5!0.63!3.31!E2F5;;chrX:134429952..134429971,-!p3@ZNF75D!0.63!3.31!ZNF75D;;chrX:131623026..131623039,-!p5@MBNL3!0.63!3.31!MBNL3;;chrX:56258929..56258941,+!p7@KLF8!0.63!3.31!KLF8;;chr10:63853436..63853442,+!p4@ARID5B!0.62!19.83!ARID5B;;chr3:129158854..129158883,-!p3@MBD4!0.62!18.51!MBD4;;chr3:114866084..114866118,-!p2@ZBTB20!0.62!13.22!ZBTB20;;chr1:8763463..8763499,-!p6@RERE!0.62!9.92!RERE;;chr12:46123273..46123329,+!p3@ARID2!0.62!5.95!ARID2;;chr18:52989081..52989117,-!p7@TCF4!0.62!5.29!TCF4;;chr12:54694758..54694805,-!p1@NFE2!0.62!3.97!NFE2;;chr7:86781734..86781777,+!p1@DMTF1!0.61!68.75!DMTF1;;chr19:56146352..56146420,+!p2@ZNF580,p2@ZNF581!0.61!23.80!ZNF580;;chr1:8763440..8763460,-!p2@RERE!0.61!18.51!RERE;;chr19:57922521..57922550,+!p1@ZNF17!0.61!14.54!ZNF17;;chr14:65569101..65569119,-!p3@MAX!0.61!11.24!MAX;;chr5:43065197..43065244,+!p5@ZNF131!0.61!6.61!ZNF131;;chr2:208030886..208030917,-!p4@KLF7!0.61!6.61!KLF7;;chr20:46130619..46130664,+!p1@NCOA3!0.60!97.17!NCOA3;;chr20:35201993..35202050,+!p1@TGIF2!0.60!40.32!TGIF2;;chr1:151319710..151319774,-!p1@RFX5!0.60!35.70!RFX5;;chr19:58144529..58144579,+!p1@ZNF211!0.60!19.17!ZNF211;;chr19:19843900..19843928,-!p1@ZNF14!0.60!17.85!ZNF14;;chr12:26277956..26277980,-!p1@BHLHE41!0.60!12.56!BHLHE41;;chr8:86089369..86089408,+!p1@E2F5!0.60!9.25!E2F5;;chr6:106534230..106534254,+!p2@PRDM1!0.60!8.59!PRDM1;;chr19:40502938..40502987,+!p1@ZNF546!0.60!8.59!ZNF546;;chr5:178322893..178322931,+!p1@ZFP2!0.60!4.63!ZFP2;;chr9:117150303..117150312,-!p3@AKNA!0.60!3.97!AKNA;;chrX:131622958..131622978,-!p3@MBNL3!0.60!3.97!MBNL3;;chr1:161015752..161015778,-!p2@USF1!0.59!40.98!USF1;;chr19:37663572..37663630,-!p1@ZNF585A!0.59!40.98!ZNF585A;;chr19:21203451..21203475,+!p1@ZNF430!0.59!35.70!ZNF430;;chr2:174830564..174830605,-!p3@SP3!0.59!17.19!SP3;;chr17:5095126..5095169,-!p1@ZNF594!0.59!14.54!ZNF594;;chr17:41322332..41322351,-!p4@BRCA1!0.59!7.93!BRCA1;;chr8:125985531..125985571,+!p1@ZNF572!0.59!6.61!ZNF572;;chr1:226595648..226595659,-!p3@PARP1!0.59!5.29!PARP1;;chr16:68119440..68119480,+!p4@NFATC3!0.59!5.29!NFATC3;;chr2:214016314..214016343,-!p2@IKZF2!0.59!5.29!IKZF2;;chr10:94449649..94449664,+!p3@HHEX!0.59!4.63!HHEX;;chr22:29196433..29196445,-!p4@XBP1!0.59!3.31!XBP1;;chr4:331578..331615,+!p1@ZNF141!0.58!37.02!ZNF141;;chr17:33288552..33288598,+!p1@ZNF830!0.58!26.44!ZNF830;;chr5:172483347..172483407,+!p1@C5orf41!0.58!25.78!CREBRF;;chr19:21512202..21512225,-!p1@ZNF708!0.58!17.19!ZNF708;;chr19:12405645..12405685,-!p1@ZNF44!0.58!11.90!ZNF44;;chr19:44809143..44809187,-!p1@ZNF235!0.58!9.92!ZNF235;;chr1:91487836..91487854,-!p3@ZNF644!0.58!7.27!ZNF6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|ffid_belonging_in_development=CL:0000134,CL:0000051
|fonse_cell_line=
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Line 66: Line 41:
|fonse_treatment=
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|fonse_treatment_closure=
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|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/CD19%252b%2520B%2520Cells%2520%2528pluriselect%2529%252c%2520donor090612%252c%2520donation2.CNhs12185.12209-129D4.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.LQhCAGE/CD19%252b%2520B%2520Cells%2520%2528pluriselect%2529%252c%2520donor090612%252c%2520donation2.CNhs12185.12209-129D4.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.LQhCAGE/CD19%252b%2520B%2520Cells%2520%2528pluriselect%2529%252c%2520donor090612%252c%2520donation2.CNhs12185.12209-129D4.hg38.nobarcode.ctss.bed.gz
|id=FF:12209-129D4
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|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;12209
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;12209
|name=CD19+ B Cells (pluriselect), donor090612, donation2
|namespace=FANTOM5
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|rna_box=129
|rna_catalog_number=
|rna_concentration=0.07999
|rna_extraction_protocol=
|rna_lot_number=
|rna_od260/230=0.64
|rna_od260/280=1.98
|rna_position=D4
|rna_rin=
|rna_sample_type=
|rna_tube_id=129D4
|rna_weight_ug=2.15973
|sample_age=
|sample_category=primary cells
|sample_cell_catalog=
|sample_cell_line=
|sample_cell_lot=090612-03
|sample_cell_type=b cell
|sample_collaboration=Matched_genome_OSC(contact:Al Forrest)
|sample_company=
|sample_description=
|sample_dev_stage=
|sample_disease=
|sample_donor(cell lot)=
|sample_ethnicity=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;3.49200945693648e-215!GO:0043227;membrane-bound organelle;5.2434390543556e-199!GO:0043231;intracellular membrane-bound organelle;1.10375386657901e-198!GO:0043226;organelle;1.43148006838639e-182!GO:0043229;intracellular organelle;6.03336042945939e-182!GO:0005737;cytoplasm;2.05023039382165e-129!GO:0044422;organelle part;8.3667847752842e-113!GO:0044446;intracellular organelle part;5.06107268288213e-111!GO:0005634;nucleus;1.09773414606324e-99!GO:0044444;cytoplasmic part;2.03153275043044e-98!GO:0032991;macromolecular complex;5.42325718903467e-98!GO:0044237;cellular metabolic process;1.25941990551719e-92!GO:0043170;macromolecule metabolic process;3.60743583504738e-91!GO:0044238;primary metabolic process;3.79468918845677e-88!GO:0030529;ribonucleoprotein complex;9.53076749745806e-88!GO:0003723;RNA binding;4.00425793858517e-78!GO:0044428;nuclear part;9.74153148074265e-78!GO:0043233;organelle lumen;2.1771823769414e-69!GO:0031974;membrane-enclosed lumen;2.1771823769414e-69!GO:0010467;gene expression;3.84066178013215e-66!GO:0043283;biopolymer metabolic process;7.4810723553124e-64!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.02536241680058e-60!GO:0005739;mitochondrion;1.536394254018e-59!GO:0006396;RNA processing;3.59341278280779e-56!GO:0006412;translation;9.28072201654652e-55!GO:0005840;ribosome;1.49278877582102e-49!GO:0043234;protein complex;5.72596017877811e-48!GO:0031981;nuclear lumen;5.88812880683955e-47!GO:0016071;mRNA metabolic process;1.2546279178363e-44!GO:0005515;protein binding;1.59550168223012e-43!GO:0033036;macromolecule localization;3.91413362662263e-43!GO:0003676;nucleic acid binding;2.49293443230113e-42!GO:0003735;structural constituent of ribosome;2.95554108793577e-42!GO:0044429;mitochondrial part;3.6594493964182e-42!GO:0015031;protein transport;1.46639092005815e-41!GO:0045184;establishment of protein localization;1.72550895581042e-40!GO:0019538;protein metabolic process;2.62177408181538e-40!GO:0009059;macromolecule biosynthetic process;4.91331022159056e-40!GO:0008380;RNA splicing;4.91331022159056e-40!GO:0008104;protein localization;1.64819506002071e-39!GO:0031090;organelle membrane;3.02230418901603e-39!GO:0044267;cellular protein metabolic process;2.0824594022869e-38!GO:0031967;organelle envelope;2.8813772732144e-38!GO:0006397;mRNA processing;6.18906863964883e-38!GO:0031975;envelope;6.18906863964883e-38!GO:0033279;ribosomal subunit;9.2109400291184e-38!GO:0044260;cellular macromolecule metabolic process;1.11824366447231e-37!GO:0016070;RNA metabolic process;1.09552477472399e-35!GO:0009058;biosynthetic process;7.48947447036937e-33!GO:0044249;cellular biosynthetic process;8.05257161496362e-33!GO:0005829;cytosol;2.16498662733411e-32!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.49115726570682e-31!GO:0005654;nucleoplasm;4.340308389192e-31!GO:0005681;spliceosome;1.5580306719992e-29!GO:0006259;DNA metabolic process;9.51449849596126e-29!GO:0046907;intracellular transport;2.38706017400822e-28!GO:0065003;macromolecular complex assembly;2.65980245229421e-28!GO:0005830;cytosolic ribosome (sensu Eukaryota);8.16432978643099e-28!GO:0006886;intracellular protein transport;3.36473887971869e-26!GO:0044445;cytosolic part;7.43363634649968e-26!GO:0005740;mitochondrial envelope;1.08236650486931e-25!GO:0019866;organelle inner membrane;1.56488025901059e-25!GO:0016043;cellular component organization and biogenesis;9.52568806388815e-25!GO:0022607;cellular component assembly;1.64529818800208e-24!GO:0031966;mitochondrial membrane;1.96422271970567e-24!GO:0044451;nucleoplasm part;2.14414845094485e-24!GO:0005743;mitochondrial inner membrane;1.96965431655407e-23!GO:0006119;oxidative phosphorylation;3.78087895935362e-21!GO:0006996;organelle organization and biogenesis;3.95709162964728e-21!GO:0000166;nucleotide binding;2.55952178763728e-20!GO:0051649;establishment of cellular localization;3.60502225887343e-20!GO:0006512;ubiquitin cycle;5.01257013497975e-20!GO:0022618;protein-RNA complex assembly;6.29274841339173e-20!GO:0015935;small ribosomal subunit;7.93901261036388e-20!GO:0051641;cellular localization;9.45287121412374e-20!GO:0031980;mitochondrial lumen;3.75398274746479e-19!GO:0005759;mitochondrial matrix;3.75398274746479e-19!GO:0015934;large ribosomal subunit;6.10194653134645e-19!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.74808625749388e-18!GO:0016817;hydrolase activity, acting on acid anhydrides;2.00623432896942e-18!GO:0044455;mitochondrial membrane part;2.25030356595552e-18!GO:0044265;cellular macromolecule catabolic process;2.30701617183904e-18!GO:0016462;pyrophosphatase activity;2.54903595131729e-18!GO:0017111;nucleoside-triphosphatase activity;4.17184253659737e-18!GO:0008134;transcription factor binding;7.87613441596806e-18!GO:0005730;nucleolus;9.5495684738023e-18!GO:0016874;ligase activity;1.11864803404362e-17!GO:0019941;modification-dependent protein catabolic process;1.73748839959452e-17!GO:0043632;modification-dependent macromolecule catabolic process;1.73748839959452e-17!GO:0051603;proteolysis involved in cellular protein catabolic process;2.14572300893142e-17!GO:0006511;ubiquitin-dependent protein catabolic process;3.30160399171225e-17!GO:0044257;cellular protein catabolic process;4.18554393159071e-17!GO:0043228;non-membrane-bound organelle;5.53397527287735e-17!GO:0043232;intracellular non-membrane-bound organelle;5.53397527287735e-17!GO:0043285;biopolymer catabolic process;6.20180258547018e-17!GO:0006974;response to DNA damage stimulus;7.83427054946512e-17!GO:0016604;nuclear body;1.97199554437221e-16!GO:0005746;mitochondrial respiratory chain;6.71077532730584e-16!GO:0006457;protein folding;1.01643771385698e-15!GO:0006605;protein targeting;2.4650829478988e-15!GO:0000502;proteasome complex (sensu Eukaryota);2.84352423649432e-15!GO:0012501;programmed cell death;3.54173642282973e-15!GO:0006915;apoptosis;3.63170253644656e-15!GO:0008135;translation factor activity, nucleic acid binding;6.13643234450916e-15!GO:0009057;macromolecule catabolic process;7.20429867100455e-15!GO:0000398;nuclear mRNA splicing, via spliceosome;9.37431593019223e-15!GO:0000375;RNA splicing, via transesterification reactions;9.37431593019223e-15!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;9.37431593019223e-15!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.40657338378964e-14!GO:0006281;DNA repair;1.90456634119348e-14!GO:0032553;ribonucleotide binding;2.66918760763377e-14!GO:0032555;purine ribonucleotide binding;2.66918760763377e-14!GO:0005761;mitochondrial ribosome;3.49105608133829e-14!GO:0000313;organellar ribosome;3.49105608133829e-14!GO:0012505;endomembrane system;3.96589963964338e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);4.58677967470266e-14!GO:0006325;establishment and/or maintenance of chromatin architecture;5.21220758019589e-14!GO:0051276;chromosome organization and biogenesis;5.79970735570136e-14!GO:0017076;purine nucleotide binding;5.85664606332197e-14!GO:0050136;NADH dehydrogenase (quinone) activity;9.46799294316238e-14!GO:0003954;NADH dehydrogenase activity;9.46799294316238e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;9.46799294316238e-14!GO:0043412;biopolymer modification;1.19201217857253e-13!GO:0050794;regulation of cellular process;1.51032111896736e-13!GO:0008219;cell death;1.56139261258131e-13!GO:0016265;death;1.56139261258131e-13!GO:0006323;DNA packaging;2.21140303737048e-13!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;2.41087872088256e-13!GO:0016887;ATPase activity;2.46520187501371e-13!GO:0005635;nuclear envelope;2.86828290647763e-13!GO:0030163;protein catabolic process;2.9094454518402e-13!GO:0042623;ATPase activity, coupled;3.65229229797896e-13!GO:0019222;regulation of metabolic process;3.905292187756e-13!GO:0031965;nuclear membrane;7.35262572182506e-13!GO:0016607;nuclear speck;1.01875908459316e-12!GO:0044248;cellular catabolic process;1.40051455563688e-12!GO:0042254;ribosome biogenesis and assembly;1.49507816208446e-12!GO:0005524;ATP binding;2.25911526879869e-12!GO:0042775;organelle ATP synthesis coupled electron transport;2.39975895368291e-12!GO:0042773;ATP synthesis coupled electron transport;2.39975895368291e-12!GO:0006413;translational initiation;3.56815581492613e-12!GO:0006913;nucleocytoplasmic transport;4.72902943914999e-12!GO:0032559;adenyl ribonucleotide binding;5.57207581254999e-12!GO:0003712;transcription cofactor activity;7.22712401680205e-12!GO:0051169;nuclear transport;7.70173751964424e-12!GO:0030964;NADH dehydrogenase complex (quinone);7.73313564055596e-12!GO:0045271;respiratory chain complex I;7.73313564055596e-12!GO:0005747;mitochondrial respiratory chain complex I;7.73313564055596e-12!GO:0005694;chromosome;1.07202616455051e-11!GO:0006446;regulation of translational initiation;1.43046791118274e-11!GO:0030554;adenyl nucleotide binding;1.64421880633334e-11!GO:0006464;protein modification process;2.04105153834288e-11!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;2.17903617704847e-11!GO:0031323;regulation of cellular metabolic process;2.60827367449209e-11!GO:0003743;translation initiation factor activity;3.05594017386535e-11!GO:0008639;small protein conjugating enzyme activity;3.60174576171975e-11!GO:0004842;ubiquitin-protein ligase activity;6.04657790001624e-11!GO:0051082;unfolded protein binding;7.41266301534947e-11!GO:0051186;cofactor metabolic process;8.19049530895784e-11!GO:0009719;response to endogenous stimulus;1.27032793935999e-10!GO:0042981;regulation of apoptosis;1.59014514900377e-10!GO:0043687;post-translational protein modification;1.94405261657322e-10!GO:0048193;Golgi vesicle transport;1.98925599994076e-10!GO:0044453;nuclear membrane part;2.22902741826179e-10!GO:0043067;regulation of programmed cell death;2.28307466293347e-10!GO:0048770;pigment granule;2.44374146745995e-10!GO:0042470;melanosome;2.44374146745995e-10!GO:0004386;helicase activity;2.81437758744283e-10!GO:0019787;small conjugating protein ligase activity;4.30065962353087e-10!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;4.82181095659493e-10!GO:0006333;chromatin assembly or disassembly;4.9708191819113e-10!GO:0016568;chromatin modification;5.82215937162715e-10!GO:0044427;chromosomal part;7.09432488326855e-10!GO:0008026;ATP-dependent helicase activity;7.17020045403396e-10!GO:0006399;tRNA metabolic process;7.45853222763666e-10!GO:0007049;cell cycle;8.34766968954958e-10!GO:0017038;protein import;1.24376814802293e-09!GO:0006350;transcription;1.31390700450575e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.46135616383621e-09!GO:0015078;hydrogen ion transmembrane transporter activity;1.73079368498172e-09!GO:0009259;ribonucleotide metabolic process;1.97129866844119e-09!GO:0010468;regulation of gene expression;1.97129866844119e-09!GO:0006403;RNA localization;2.21498821184738e-09!GO:0050657;nucleic acid transport;2.59518404312727e-09!GO:0051236;establishment of RNA localization;2.59518404312727e-09!GO:0050658;RNA transport;2.59518404312727e-09!GO:0065004;protein-DNA complex assembly;2.72195878293309e-09!GO:0016072;rRNA metabolic process;3.08174948153563e-09!GO:0005643;nuclear pore;3.12927720227197e-09!GO:0006164;purine nucleotide biosynthetic process;3.23061947832742e-09!GO:0019829;cation-transporting ATPase activity;4.24268808721492e-09!GO:0009260;ribonucleotide biosynthetic process;4.32826459442442e-09!GO:0006364;rRNA processing;4.33463842893555e-09!GO:0006163;purine nucleotide metabolic process;4.73533103738577e-09!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;4.85279174127895e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;7.06924810385601e-09!GO:0005839;proteasome core complex (sensu Eukaryota);7.9527602599232e-09!GO:0006732;coenzyme metabolic process;8.26834063164996e-09!GO:0005794;Golgi apparatus;8.64288298760557e-09!GO:0009152;purine ribonucleotide biosynthetic process;9.89739453429782e-09!GO:0050789;regulation of biological process;1.15943252950037e-08!GO:0030532;small nuclear ribonucleoprotein complex;1.36536478181627e-08!GO:0009150;purine ribonucleotide metabolic process;1.53074882192876e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.76434038882359e-08!GO:0044432;endoplasmic reticulum part;1.79282954889516e-08!GO:0043566;structure-specific DNA binding;1.93102267107302e-08!GO:0051246;regulation of protein metabolic process;1.937112771967e-08!GO:0003713;transcription coactivator activity;2.04128296815326e-08!GO:0005783;endoplasmic reticulum;2.15821067444149e-08!GO:0016192;vesicle-mediated transport;2.55908560343042e-08!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.58117369138063e-08!GO:0015986;ATP synthesis coupled proton transport;2.9839273903101e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;2.9839273903101e-08!GO:0065002;intracellular protein transport across a membrane;3.4994757549568e-08!GO:0016881;acid-amino acid ligase activity;3.58447241316111e-08!GO:0004298;threonine endopeptidase activity;4.14957079151734e-08!GO:0007249;I-kappaB kinase/NF-kappaB cascade;5.73617051056691e-08!GO:0051028;mRNA transport;8.82596254056866e-08!GO:0000785;chromatin;1.14000573036226e-07!GO:0008270;zinc ion binding;1.30575987471979e-07!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;1.3099894691466e-07!GO:0009142;nucleoside triphosphate biosynthetic process;1.60762214677488e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.60762214677488e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.61704652720395e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.61704652720395e-07!GO:0046930;pore complex;1.61834084319879e-07!GO:0008565;protein transporter activity;1.84067381750722e-07!GO:0003697;single-stranded DNA binding;2.03918049097376e-07!GO:0016469;proton-transporting two-sector ATPase complex;2.20199467895763e-07!GO:0032446;protein modification by small protein conjugation;2.27997006592792e-07!GO:0022402;cell cycle process;2.38430427265156e-07!GO:0000245;spliceosome assembly;2.41722010662831e-07!GO:0006754;ATP biosynthetic process;2.55642524209065e-07!GO:0006753;nucleoside phosphate metabolic process;2.55642524209065e-07!GO:0016787;hydrolase activity;2.58684335755076e-07!GO:0015077;monovalent inorganic cation transmembrane transporter activity;2.71027440318209e-07!GO:0009060;aerobic respiration;2.93068884629231e-07!GO:0051726;regulation of cell cycle;3.14778559065962e-07!GO:0000074;regulation of progression through cell cycle;4.06528722190263e-07!GO:0032774;RNA biosynthetic process;4.19094122275293e-07!GO:0042175;nuclear envelope-endoplasmic reticulum network;4.19312940765155e-07!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;4.50210646202515e-07!GO:0009199;ribonucleoside triphosphate metabolic process;4.71638067047658e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;4.91909783634955e-07!GO:0009144;purine nucleoside triphosphate metabolic process;4.91909783634955e-07!GO:0006351;transcription, DNA-dependent;4.99994414957971e-07!GO:0005789;endoplasmic reticulum membrane;5.29506134129691e-07!GO:0016567;protein ubiquitination;5.42250248894657e-07!GO:0009141;nucleoside triphosphate metabolic process;5.50675446787138e-07!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;6.52703674813785e-07!GO:0006793;phosphorus metabolic process;6.55378737168368e-07!GO:0006796;phosphate metabolic process;6.55378737168368e-07!GO:0045449;regulation of transcription;7.05730818492734e-07!GO:0006366;transcription from RNA polymerase II promoter;8.83669827107962e-07!GO:0005768;endosome;9.66650508187319e-07!GO:0009055;electron carrier activity;1.00786678403272e-06!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.06392320610316e-06!GO:0004812;aminoacyl-tRNA ligase activity;1.06392320610316e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.06392320610316e-06!GO:0051188;cofactor biosynthetic process;1.10644056923377e-06!GO:0009056;catabolic process;1.13478953468207e-06!GO:0046034;ATP metabolic process;1.23883481239912e-06!GO:0007243;protein kinase cascade;1.35111209423184e-06!GO:0016779;nucleotidyltransferase activity;1.43613085369399e-06!GO:0045333;cellular respiration;1.49917336665136e-06!GO:0051170;nuclear import;1.58881291662784e-06!GO:0016310;phosphorylation;1.67869909080943e-06!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.67986748028478e-06!GO:0045259;proton-transporting ATP synthase complex;1.73984881936982e-06!GO:0000151;ubiquitin ligase complex;1.81552467752578e-06!GO:0043038;amino acid activation;2.08460561141242e-06!GO:0006418;tRNA aminoacylation for protein translation;2.08460561141242e-06!GO:0043039;tRNA aminoacylation;2.08460561141242e-06!GO:0006334;nucleosome assembly;2.1813840957238e-06!GO:0065009;regulation of a molecular function;2.20173159411418e-06!GO:0031497;chromatin assembly;2.25919713798881e-06!GO:0006888;ER to Golgi vesicle-mediated transport;2.43341653241937e-06!GO:0006606;protein import into nucleus;2.9845641123329e-06!GO:0005793;ER-Golgi intermediate compartment;3.81577173797814e-06!GO:0006260;DNA replication;4.41170189993284e-06!GO:0016563;transcription activator activity;4.51997924112846e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;4.58059730415112e-06!GO:0006417;regulation of translation;4.60651634616125e-06!GO:0005770;late endosome;5.81420655305788e-06!GO:0046914;transition metal ion binding;6.07564666612609e-06!GO:0006099;tricarboxylic acid cycle;6.07564666612609e-06!GO:0046356;acetyl-CoA catabolic process;6.07564666612609e-06!GO:0043069;negative regulation of programmed cell death;6.21427643294457e-06!GO:0007005;mitochondrion organization and biogenesis;6.32480965597365e-06!GO:0016564;transcription repressor activity;6.32874427351754e-06!GO:0006084;acetyl-CoA metabolic process;7.5603047046548e-06!GO:0006461;protein complex assembly;7.5603047046548e-06!GO:0009615;response to virus;9.30125823476481e-06!GO:0043066;negative regulation of apoptosis;9.43513063273231e-06!GO:0006613;cotranslational protein targeting to membrane;9.45021152312985e-06!GO:0003724;RNA helicase activity;1.07896757684143e-05!GO:0031324;negative regulation of cellular metabolic process;1.10207412611639e-05!GO:0009108;coenzyme biosynthetic process;1.10838337547556e-05!GO:0019899;enzyme binding;1.41847235561509e-05!GO:0006401;RNA catabolic process;1.682520574386e-05!GO:0016740;transferase activity;1.68910944977823e-05!GO:0006355;regulation of transcription, DNA-dependent;1.95700590772085e-05!GO:0065007;biological regulation;2.34835177825708e-05!GO:0009117;nucleotide metabolic process;2.83601625562833e-05!GO:0005773;vacuole;2.97705717593124e-05!GO:0051168;nuclear export;3.08471247740266e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;3.12252336264045e-05!GO:0015399;primary active transmembrane transporter activity;3.12252336264045e-05!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.49253261536058e-05!GO:0030120;vesicle coat;3.7069634944562e-05!GO:0030662;coated vesicle membrane;3.7069634944562e-05!GO:0002504;antigen processing and presentation of peptide or polysaccharide antigen via MHC class II;3.85477830180101e-05!GO:0044440;endosomal part;3.92841930984294e-05!GO:0010008;endosome membrane;3.92841930984294e-05!GO:0003677;DNA binding;3.93153472659543e-05!GO:0006752;group transfer coenzyme metabolic process;4.31203452018218e-05!GO:0043065;positive regulation of apoptosis;4.48269648669617e-05!GO:0009109;coenzyme catabolic process;4.59432839925122e-05!GO:0042613;MHC class II protein complex;4.69400778331474e-05!GO:0005762;mitochondrial large ribosomal subunit;4.72564231395071e-05!GO:0000315;organellar large ribosomal subunit;4.72564231395071e-05!GO:0045786;negative regulation of progression through cell cycle;5.11817328133018e-05!GO:0048523;negative regulation of cellular process;5.48057652496232e-05!GO:0048475;coated membrane;6.23565600385342e-05!GO:0030117;membrane coat;6.23565600385342e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;6.53593835084013e-05!GO:0006612;protein targeting to membrane;6.61068655687079e-05!GO:0043068;positive regulation of programmed cell death;6.75644450014635e-05!GO:0031326;regulation of cellular biosynthetic process;7.05921909161436e-05!GO:0051187;cofactor catabolic process;7.13620064469064e-05!GO:0006916;anti-apoptosis;7.42587969116023e-05!GO:0000323;lytic vacuole;7.60039523530286e-05!GO:0005764;lysosome;7.60039523530286e-05!GO:0016481;negative regulation of transcription;7.74699237410687e-05!GO:0005667;transcription factor complex;0.000105926341869285!GO:0000314;organellar small ribosomal subunit;0.000145882342300706!GO:0005763;mitochondrial small ribosomal subunit;0.000145882342300706!GO:0031072;heat shock protein binding;0.000155336992773063!GO:0008186;RNA-dependent ATPase activity;0.000159516484610201!GO:0008033;tRNA processing;0.000165091555669712!GO:0003714;transcription corepressor activity;0.000165091555669712!GO:0016197;endosome transport;0.000165091555669712!GO:0003924;GTPase activity;0.000180713244425119!GO:0007264;small GTPase mediated signal transduction;0.000181642795880132!GO:0043492;ATPase activity, coupled to movement of substances;0.000185162470879997!GO:0003690;double-stranded DNA binding;0.000185622269794275!GO:0006402;mRNA catabolic process;0.000187498978875443!GO:0006818;hydrogen transport;0.00019079671603682!GO:0042113;B cell activation;0.000193687152535209!GO:0009892;negative regulation of metabolic process;0.000194154339078345!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000194154339078345!GO:0005885;Arp2/3 protein complex;0.000194638336223174!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000213363871674907!GO:0005525;GTP binding;0.000223306301312841!GO:0015992;proton transport;0.000239183432233305!GO:0008654;phospholipid biosynthetic process;0.000239183432233305!GO:0044431;Golgi apparatus part;0.000240880736307103!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000247130133679434!GO:0008632;apoptotic program;0.000250081517909598!GO:0043021;ribonucleoprotein binding;0.000253102784195963!GO:0003899;DNA-directed RNA polymerase activity;0.000268653299520313!GO:0000278;mitotic cell cycle;0.000294803094664996!GO:0043681;protein import into mitochondrion;0.000307393324348647!GO:0006917;induction of apoptosis;0.000308385337886065!GO:0050790;regulation of catalytic activity;0.000315705394196138!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000343144321344079!GO:0030384;phosphoinositide metabolic process;0.000398261441157954!GO:0012502;induction of programmed cell death;0.000433604942667097!GO:0007242;intracellular signaling cascade;0.0004837775361128!GO:0004004;ATP-dependent RNA helicase activity;0.000486930454210864!GO:0009889;regulation of biosynthetic process;0.000493817824558863!GO:0003729;mRNA binding;0.00050289293262189!GO:0000786;nucleosome;0.000518377527605057!GO:0044452;nucleolar part;0.000549489266020149!GO:0022890;inorganic cation transmembrane transporter activity;0.000578429748649311!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000579797818692718!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00059235365305209!GO:0005813;centrosome;0.000596633358959745!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000602622927463386!GO:0006310;DNA recombination;0.000608812153668476!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000665357887366552!GO:0008168;methyltransferase activity;0.000680962263299068!GO:0016741;transferase activity, transferring one-carbon groups;0.000686225025367352!GO:0006261;DNA-dependent DNA replication;0.000712904210839571!GO:0051427;hormone receptor binding;0.00080223115715364!GO:0006352;transcription initiation;0.000826207894240728!GO:0048519;negative regulation of biological process;0.000868673776679677!GO:0004518;nuclease activity;0.000872671020136053!GO:0008234;cysteine-type peptidase activity;0.000960894525318419!GO:0043623;cellular protein complex assembly;0.000968265148433978!GO:0009967;positive regulation of signal transduction;0.0010241244042013!GO:0009165;nucleotide biosynthetic process;0.00105542996386122!GO:0007265;Ras protein signal transduction;0.00115938772389333!GO:0031902;late endosome membrane;0.00118449166345285!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.00121188456117696!GO:0051252;regulation of RNA metabolic process;0.00131370028716205!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00137882018393936!GO:0015002;heme-copper terminal oxidase activity;0.00137882018393936!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00137882018393936!GO:0004129;cytochrome-c oxidase activity;0.00137882018393936!GO:0005815;microtubule organizing center;0.00142622229406538!GO:0016251;general RNA polymerase II transcription factor activity;0.00143930050745292!GO:0006950;response to stress;0.00145330466247612!GO:0006650;glycerophospholipid metabolic process;0.00145937189115186!GO:0035257;nuclear hormone receptor binding;0.00146714309902233!GO:0045454;cell redox homeostasis;0.00152743969920922!GO:0003725;double-stranded RNA binding;0.00158040177828166!GO:0006383;transcription from RNA polymerase III promoter;0.00162916419886222!GO:0006414;translational elongation;0.00174997113345122!GO:0007006;mitochondrial membrane organization and biogenesis;0.00188576800876235!GO:0043488;regulation of mRNA stability;0.00194036187586227!GO:0043487;regulation of RNA stability;0.00194036187586227!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00197081443552794!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00197081443552794!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00197081443552794!GO:0016363;nuclear matrix;0.00197453287860625!GO:0032561;guanyl ribonucleotide binding;0.00197453287860625!GO:0019001;guanyl nucleotide binding;0.00197453287860625!GO:0046489;phosphoinositide biosynthetic process;0.00207714445430604!GO:0051789;response to protein stimulus;0.00213854649522458!GO:0006986;response to unfolded protein;0.00213854649522458!GO:0033116;ER-Golgi intermediate compartment membrane;0.00218898254106045!GO:0000087;M phase of mitotic cell cycle;0.00224910569538612!GO:0051336;regulation of hydrolase activity;0.00229037204781786!GO:0043087;regulation of GTPase activity;0.00231080782162144!GO:0048500;signal recognition particle;0.00245893690703967!GO:0046474;glycerophospholipid biosynthetic process;0.00253444925730721!GO:0051301;cell division;0.00261080133055367!GO:0005774;vacuolar membrane;0.0027420159205815!GO:0008047;enzyme activator activity;0.00275677021706631!GO:0016859;cis-trans isomerase activity;0.00277582164125761!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.0029315605095163!GO:0007067;mitosis;0.00299350258535305!GO:0005684;U2-dependent spliceosome;0.00302802020930816!GO:0007034;vacuolar transport;0.0030609638901071!GO:0045892;negative regulation of transcription, DNA-dependent;0.00313572657291745!GO:0003711;transcription elongation regulator activity;0.00323584492896733!GO:0006405;RNA export from nucleus;0.00337984331426036!GO:0004674;protein serine/threonine kinase activity;0.0034220528636869!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00352563945040462!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00352563945040462!GO:0051920;peroxiredoxin activity;0.00355113445014779!GO:0006839;mitochondrial transport;0.00378571029554384!GO:0006891;intra-Golgi vesicle-mediated transport;0.00378571029554384!GO:0008312;7S RNA binding;0.00381908946893792!GO:0000139;Golgi membrane;0.00384376814746997!GO:0002764;immune response-regulating signal transduction;0.00398633956576793!GO:0046649;lymphocyte activation;0.00409783499767279!GO:0005048;signal sequence binding;0.00415188887237871!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00415188887237871!GO:0045047;protein targeting to ER;0.00415188887237871!GO:0005769;early endosome;0.00415774996049025!GO:0048471;perinuclear region of cytoplasm;0.00421051546153109!GO:0000118;histone deacetylase complex;0.00423401990460014!GO:0003678;DNA helicase activity;0.00428121278271675!GO:0002768;immune response-regulating cell surface receptor signaling pathway;0.00452326629010602!GO:0045947;negative regulation of translational initiation;0.00453911783108319!GO:0003684;damaged DNA binding;0.00455295357305897!GO:0005637;nuclear inner membrane;0.00455295357305897!GO:0004527;exonuclease activity;0.00466118243385174!GO:0005798;Golgi-associated vesicle;0.00472183403666091!GO:0016853;isomerase activity;0.0052029337240065!GO:0006611;protein export from nucleus;0.00535669368937856!GO:0022403;cell cycle phase;0.00535669368937856!GO:0032200;telomere organization and biogenesis;0.00535669368937856!GO:0000723;telomere maintenance;0.00535669368937856!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00562822083035718!GO:0044437;vacuolar part;0.00573054310142968!GO:0030695;GTPase regulator activity;0.00595409072743451!GO:0006302;double-strand break repair;0.0061553160188095!GO:0005765;lysosomal membrane;0.00619105324835509!GO:0005741;mitochondrial outer membrane;0.00622852778449297!GO:0004532;exoribonuclease activity;0.00623240419329248!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.00623240419329248!GO:0005657;replication fork;0.00630116336215001!GO:0016584;nucleosome positioning;0.00642806746200304!GO:0030433;ER-associated protein catabolic process;0.00642806746200304!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.00642806746200304!GO:0006289;nucleotide-excision repair;0.00655029670930119!GO:0006626;protein targeting to mitochondrion;0.00661352858307426!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00669018468780445!GO:0008408;3'-5' exonuclease activity;0.00702252362035255!GO:0002376;immune system process;0.00708340821698243!GO:0006091;generation of precursor metabolites and energy;0.00749452054491136!GO:0048522;positive regulation of cellular process;0.00758081470613583!GO:0046467;membrane lipid biosynthetic process;0.00771780775542559!GO:0031252;leading edge;0.00799207804988501!GO:0031968;organelle outer membrane;0.00876566012780462!GO:0031625;ubiquitin protein ligase binding;0.00882495655150138!GO:0005669;transcription factor TFIID complex;0.00893889775871624!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.00901171776588808!GO:0046822;regulation of nucleocytoplasmic transport;0.00907330240891126!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00930007368721152!GO:0019867;outer membrane;0.00936841112618801!GO:0032940;secretion by cell;0.00938346329945944!GO:0002757;immune response-activating signal transduction;0.0094097031854823!GO:0006376;mRNA splice site selection;0.00974259490173612!GO:0000389;nuclear mRNA 3'-splice site recognition;0.00974259490173612!GO:0030880;RNA polymerase complex;0.0101886519778606!GO:0046966;thyroid hormone receptor binding;0.0104323318083159!GO:0003746;translation elongation factor activity;0.0106720646801429!GO:0016605;PML body;0.0107145293978008!GO:0051087;chaperone binding;0.0107809271001044!GO:0002429;immune response-activating cell surface receptor signaling pathway;0.0108514980260773!GO:0030658;transport vesicle membrane;0.0108724473016593!GO:0047485;protein N-terminus binding;0.0111864455938179!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0112425037450564!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0112425037450564!GO:0051539;4 iron, 4 sulfur cluster binding;0.0112955932640394!GO:0006607;NLS-bearing substrate import into nucleus;0.0113269203378745!GO:0045321;leukocyte activation;0.0115560302374841!GO:0015980;energy derivation by oxidation of organic compounds;0.0120187902553887!GO:0016272;prefoldin complex;0.012322393123007!GO:0009451;RNA modification;0.0125229727611482!GO:0009116;nucleoside metabolic process;0.0129498502427548!GO:0050851;antigen receptor-mediated signaling pathway;0.0132556349044499!GO:0007041;lysosomal transport;0.0135732304374495!GO:0043281;regulation of caspase activity;0.0136167530316625!GO:0019883;antigen processing and presentation of endogenous antigen;0.0140136142728113!GO:0043022;ribosome binding;0.0145587310379051!GO:0051052;regulation of DNA metabolic process;0.0145715190139358!GO:0042802;identical protein binding;0.0147108714928077!GO:0000781;chromosome, telomeric region;0.0149380246350317!GO:0030518;steroid hormone receptor signaling pathway;0.0149717072479568!GO:0019843;rRNA binding;0.0150788642021795!GO:0006595;polyamine metabolic process;0.0156141914835114!GO:0060090;molecular adaptor activity;0.015749035719213!GO:0030258;lipid modification;0.0162130421052782!GO:0019882;antigen processing and presentation;0.0165690113617343!GO:0045045;secretory pathway;0.0168733320691162!GO:0032259;methylation;0.0170012129185206!GO:0030663;COPI coated vesicle membrane;0.0171119679549544!GO:0030126;COPI vesicle coat;0.0171119679549544!GO:0015631;tubulin binding;0.0175762862447227!GO:0030137;COPI-coated vesicle;0.0175762862447227!GO:0000279;M phase;0.017877906714361!GO:0019783;small conjugating protein-specific protease activity;0.018139610970845!GO:0006506;GPI anchor biosynthetic process;0.0182920006699645!GO:0000049;tRNA binding;0.0188259167192111!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0190761558789102!GO:0000428;DNA-directed RNA polymerase complex;0.0190761558789102!GO:0030521;androgen receptor signaling pathway;0.0192706309665787!GO:0030118;clathrin coat;0.0198287199208004!GO:0031901;early endosome membrane;0.0201825310454831!GO:0032395;MHC class II receptor activity;0.0203021052733471!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.02062995247851!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.02062995247851!GO:0032318;regulation of Ras GTPase activity;0.0209452008237862!GO:0048002;antigen processing and presentation of peptide antigen;0.0211575023346385!GO:0006284;base-excision repair;0.0217527699542072!GO:0030041;actin filament polymerization;0.0217906297457194!GO:0008097;5S rRNA binding;0.0226176015630259!GO:0030660;Golgi-associated vesicle membrane;0.0226251798423456!GO:0004843;ubiquitin-specific protease activity;0.0228721902975971!GO:0000738;DNA catabolic process, exonucleolytic;0.0230248590140232!GO:0006338;chromatin remodeling;0.0231389403650547!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.0231788943370529!GO:0004197;cysteine-type endopeptidase activity;0.0232541166189215!GO:0042824;MHC class I peptide loading complex;0.0232541166189215!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0239297015995715!GO:0006919;caspase activation;0.0239435406343586!GO:0005869;dynactin complex;0.0240961590548086!GO:0051098;regulation of binding;0.0241239185078952!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.025797394396935!GO:0006497;protein amino acid lipidation;0.0259761857500643!GO:0050871;positive regulation of B cell activation;0.0262421768428744!GO:0008139;nuclear localization sequence binding;0.0265311639476189!GO:0008094;DNA-dependent ATPase activity;0.0265607904518783!GO:0045730;respiratory burst;0.0265607904518783!GO:0043414;biopolymer methylation;0.0267530492006421!GO:0031124;mRNA 3'-end processing;0.0269201787275014!GO:0006505;GPI anchor metabolic process;0.0270058406955831!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0271700245392971!GO:0010257;NADH dehydrogenase complex assembly;0.0271700245392971!GO:0033108;mitochondrial respiratory chain complex assembly;0.0271700245392971!GO:0006672;ceramide metabolic process;0.0272258770062294!GO:0050853;B cell receptor signaling pathway;0.028214061558986!GO:0030867;rough endoplasmic reticulum membrane;0.028237633082203!GO:0048487;beta-tubulin binding;0.0282669679010085!GO:0015923;mannosidase activity;0.028365317678409!GO:0006914;autophagy;0.0285957538450473!GO:0000178;exosome (RNase complex);0.0286164131086217!GO:0019814;immunoglobulin complex;0.0288854165445686!GO:0019815;B cell receptor complex;0.0288854165445686!GO:0046979;TAP2 binding;0.0288854165445686!GO:0046977;TAP binding;0.0288854165445686!GO:0046978;TAP1 binding;0.0288854165445686!GO:0005832;chaperonin-containing T-complex;0.030198748374314!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0303853375744609!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0306448399244096!GO:0004003;ATP-dependent DNA helicase activity;0.0307921807629755!GO:0005521;lamin binding;0.031150259740927!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0311579966231314!GO:0018193;peptidyl-amino acid modification;0.0312964477680294!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0312964477680294!GO:0051223;regulation of protein transport;0.0314599940649689!GO:0005096;GTPase activator activity;0.0315906398413948!GO:0002483;antigen processing and presentation of endogenous peptide antigen;0.0319160900933787!GO:0019885;antigen processing and presentation of endogenous peptide antigen via MHC class I;0.0319160900933787!GO:0005083;small GTPase regulator activity;0.0319499905960148!GO:0008017;microtubule binding;0.0319499905960148!GO:0008538;proteasome activator activity;0.0320377513878072!GO:0004576;oligosaccharyl transferase activity;0.0324829836083389!GO:0000287;magnesium ion binding;0.0328983916084415!GO:0004540;ribonuclease activity;0.032919464069202!GO:0006516;glycoprotein catabolic process;0.0329198466275779!GO:0051092;activation of NF-kappaB transcription factor;0.0332095906900416!GO:0031647;regulation of protein stability;0.0332868500670651!GO:0051540;metal cluster binding;0.0335027281586501!GO:0051536;iron-sulfur cluster binding;0.0335027281586501!GO:0004722;protein serine/threonine phosphatase activity;0.0337758829695683!GO:0009112;nucleobase metabolic process;0.0342419719033589!GO:0000175;3'-5'-exoribonuclease activity;0.0342762848329845!GO:0000339;RNA cap binding;0.0349248915714836!GO:0009161;ribonucleoside monophosphate metabolic process;0.0358184341797552!GO:0009156;ribonucleoside monophosphate biosynthetic process;0.0358184341797552!GO:0051251;positive regulation of lymphocyte activation;0.0362481473520244!GO:0008250;oligosaccharyl transferase complex;0.0365383746629833!GO:0004221;ubiquitin thiolesterase activity;0.0366096870547941!GO:0000209;protein polyubiquitination;0.0374511860474532!GO:0007004;telomere maintenance via telomerase;0.0376626037807478!GO:0004428;inositol or phosphatidylinositol kinase activity;0.0376705865145708!GO:0000123;histone acetyltransferase complex;0.0387553975491605!GO:0009607;response to biotic stimulus;0.0391666406679519!GO:0000119;mediator complex;0.0391699485634348!GO:0031123;RNA 3'-end processing;0.0399242824444082!GO:0008180;signalosome;0.0402216250607561!GO:0000303;response to superoxide;0.0404141466827014!GO:0043596;nuclear replication fork;0.0405224676097429!GO:0022406;membrane docking;0.0407210192540216!GO:0048278;vesicle docking;0.0407210192540216!GO:0043280;positive regulation of caspase activity;0.0411625829678959!GO:0051059;NF-kappaB binding;0.0416980879789849!GO:0007040;lysosome organization and biogenesis;0.0417322383140023!GO:0000059;protein import into nucleus, docking;0.0420463358857773!GO:0007050;cell cycle arrest;0.0425828950118687!GO:0006144;purine base metabolic process;0.0426806310206737!GO:0043550;regulation of lipid kinase activity;0.0427161595169355!GO:0016763;transferase activity, transferring pentosyl groups;0.042853864811935!GO:0008287;protein serine/threonine phosphatase complex;0.043232111656085!GO:0007021;tubulin folding;0.0433226273553106!GO:0006368;RNA elongation from RNA polymerase II promoter;0.043356831337143!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0436905248716587!GO:0005784;translocon complex;0.0439505727630815!GO:0046483;heterocycle metabolic process;0.0440554827386972!GO:0003682;chromatin binding;0.0441431012024664!GO:0051090;regulation of transcription factor activity;0.0444807876209844!GO:0031982;vesicle;0.0445382630468638!GO:0003950;NAD+ ADP-ribosyltransferase activity;0.0451058006965667!GO:0046128;purine ribonucleoside metabolic process;0.0453674586391746!GO:0042278;purine nucleoside metabolic process;0.0453674586391746!GO:0030125;clathrin vesicle coat;0.0466774228174294!GO:0030665;clathrin coated vesicle membrane;0.0466774228174294!GO:0015036;disulfide oxidoreductase activity;0.047245356427723!GO:0030119;AP-type membrane coat adaptor complex;0.047349679435402!GO:0030833;regulation of actin filament polymerization;0.0479236030429812!GO:0032508;DNA duplex unwinding;0.0488261370941814!GO:0032392;DNA geometric change;0.0488261370941814!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0488261370941814!GO:0048518;positive regulation of biological process;0.0492207028614367!GO:0009124;nucleoside monophosphate biosynthetic process;0.049239209926309!GO:0009123;nucleoside monophosphate metabolic process;0.049239209926309!GO:0017134;fibroblast growth factor binding;0.0493559995442088!GO:0032039;integrator complex;0.0494230008968936!GO:0006904;vesicle docking during exocytosis;0.0494230008968936!GO:0046519;sphingoid metabolic process;0.0498242374790694
|sample_id=12209
|sample_note=
|sample_sex=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=blood
|top_motifs=POU2F1..3:3.3047692326;POU5F1:3.20945799116;FOXA2:2.66248542242;PBX1:1.95460541429;ELF1,2,4:1.86846326877;DMAP1_NCOR{1,2}_SMARC:1.83460461801;TLX2:1.83306623834;FOX{I1,J2}:1.82753581051;FOX{F1,F2,J1}:1.75330376369;SPI1:1.4607040224;ELK1,4_GABP{A,B1}:1.42313366566;FOXO1,3,4:1.4168428197;IRF1,2:1.41091583274;CRX:1.35116641264;FOX{D1,D2}:1.32305728542;ETS1,2:1.30052798164;SPIB:1.29390721728;STAT1,3:1.13870156241;PAX6:1.11399152196;ESR1:1.08466028894;RUNX1..3:1.04896217417;YY1:1.01708216667;NFKB1_REL_RELA:0.977917261401;FOXP3:0.915684393104;NANOG{mouse}:0.906634765081;IRF7:0.886025014561;RFX2..5_RFXANK_RFXAP:0.842919032646;MYOD1:0.837141303932;AIRE:0.795069825832;LMO2:0.769674150543;CDX1,2,4:0.749259833548;ZEB1:0.726023125043;BPTF:0.711716721104;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.709238913943;OCT4_SOX2{dimer}:0.672686894807;ALX1:0.670762005469;NKX2-2,8:0.63180972621;RORA:0.608326886727;TGIF1:0.594724957127;HBP1_HMGB_SSRP1_UBTF:0.506998916983;SNAI1..3:0.504103847998;GATA6:0.479868634679;BREu{core}:0.475535819977;ATF5_CREB3:0.432291930102;NR5A1,2:0.402220364575;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.401031365207;VSX1,2:0.394942027553;CREB1:0.393278291266;CUX2:0.357942316902;FOXN1:0.353575193319;MYB:0.340216179714;HMX1:0.338299071482;HES1:0.336902769094;PDX1:0.325507208082;SOX{8,9,10}:0.320609503908;MEF2{A,B,C,D}:0.289027611508;NKX6-1,2:0.287410923467;FOXQ1:0.283226741518;SOX5:0.282762582516;PAX3,7:0.280240279867;NRF1:0.273421359381;ZNF148:0.25548565953;NFIX:0.254686303993;STAT5{A,B}:0.22143373441;ZNF143:0.213175097333;FOXP1:0.204707503938;LEF1_TCF7_TCF7L1,2:0.187062290771;NFIL3:0.184970930522;ATF2:0.149959974205;HOX{A6,A7,B6,B7}:0.129937426688;GLI1..3:0.123419600625;NHLH1,2:0.088407421397;PRRX1,2:0.0868442828553;SREBF1,2:0.0777612274537;ATF4:0.0306147050043;SPZ1:0.0214100186715;IKZF2:-0.00762941925825;EP300:-0.015567351764;PAX2:-0.0787557274514;HIF1A:-0.0871938686168;RBPJ:-0.119533841807;NKX2-1,4:-0.121647265838;NFY{A,B,C}:-0.129143788185;NFATC1..3:-0.130228375023;HAND1,2:-0.138344533709;ZFP161:-0.142314150831;HNF4A_NR2F1,2:-0.175750152657;TEF:-0.179378893102;ADNP_IRX_SIX_ZHX:-0.215228965093;TAL1_TCF{3,4,12}:-0.216888179468;SMAD1..7,9:-0.284943526357;CDC5L:-0.304505408407;PPARG:-0.318249501729;E2F1..5:-0.322348706703;TFAP4:-0.323969535214;EBF1:-0.332150233406;T:-0.356806471066;HNF1A:-0.357110160143;NKX2-3_NKX2-5:-0.401430598601;ALX4:-0.404052521487;POU1F1:-0.404588852971;ARID5B:-0.421762792897;AR:-0.425986796437;RXRA_VDR{dimer}:-0.438267923074;FOXL1:-0.453404815227;ZBTB16:-0.454030711537;TOPORS:-0.45545929304;PRDM1:-0.456882882406;EVI1:-0.475903343982;AHR_ARNT_ARNT2:-0.479419574159;NR6A1:-0.488202324127;CEBPA,B_DDIT3:-0.513173840988;bHLH_family:-0.51603603836;GFI1:-0.519639050355;ATF6:-0.521519931576;RFX1:-0.526568370109;FOSL2:-0.541269302248;TFCP2:-0.579645115137;FOS_FOS{B,L1}_JUN{B,D}:-0.587277985049;MYBL2:-0.625203323248;NR1H4:-0.650338930331;NANOG:-0.653508487838;PAX4:-0.656211727002;JUN:-0.665737219363;HOXA9_MEIS1:-0.672510274542;DBP:-0.691394863782;BACH2:-0.713207635608;MYFfamily:-0.719078292808;MAFB:-0.722893661287;XCPE1{core}:-0.735832145274;SRF:-0.757084526224;HOX{A4,D4}:-0.767774950486;POU6F1:-0.788102100946;ONECUT1,2:-0.810275153989;XBP1:-0.816936376946;PATZ1:-0.819683294382;ZNF238:-0.849775139311;TBP:-0.868357104934;NKX3-2:-0.900209519706;RXR{A,B,G}:-0.912311717739;RREB1:-0.913457220779;HLF:-0.916481162879;EGR1..3:-0.919963449954;SOX2:-0.929436171253;STAT2,4,6:-0.93204884399;MTE{core}:-0.96734368039;NFE2:-0.973796030766;HMGA1,2:-0.984052998904;MED-1{core}:-1.00310838083;EN1,2:-1.03021457207;MZF1:-1.04481440326;NKX3-1:-1.0537404555;HSF1,2:-1.06463613258;REST:-1.08397356865;TBX4,5:-1.08532030433;ZNF384:-1.09830674286;MTF1:-1.10063740556;TP53:-1.11620905188;NFE2L2:-1.12570341717;GATA4:-1.1271133331;SOX17:-1.12881603946;ZNF423:-1.19780383211;GFI1B:-1.23512437151;NR3C1:-1.23538441849;MAZ:-1.23794620687;HOX{A5,B5}:-1.27642795866;LHX3,4:-1.28591124982;SP1:-1.33549745272;PAX8:-1.36423334387;PITX1..3:-1.38942123818;UFEwm:-1.41082526924;GZF1:-1.43649783444;FOXM1:-1.43695241451;HIC1:-1.44883920118;ESRRA:-1.45961531167;GCM1,2:-1.49317411091;ZBTB6:-1.50123956752;TFAP2B:-1.54793234564;TFAP2{A,C}:-1.55949962296;GTF2I:-1.585877024;KLF4:-1.63557727434;NFE2L1:-1.69067837471;TEAD1:-1.69311297908;PAX5:-1.70578927416;POU3F1..4:-1.79877851376;PAX1,9:-1.80115953681;TLX1..3_NFIC{dimer}:-1.86982211917;FOXD3:-1.94585529661;GTF2A1,2:-1.98910431136;IKZF1:-1.99918024185;TFDP1:-2.01600391565;ZIC1..3:-2.17938274468
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:12209-129D4;search_select_hide=table117:FF:12209-129D4
}}
}}

Latest revision as of 18:34, 4 June 2020

Name:CD19+ B Cells (pluriselect), donor090612, donation2
Species:Human (Homo sapiens)
Library ID:CNhs12185,RDhi10011
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueblood
dev stageNA
sexNA
ageNA
cell typeb cell
cell lineNA
companyNA
collaborationMatched_genome_OSC(contact:Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typeNA
extraction protocol (Details)NA

CAGE Accession numbers
MethodSample accession id
RNA-Seq  SAMD00013675
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs12185 CAGE DRX008056 DRR008928
RDhi10011 RNA-Seq DRX012345 DRR013793
Accession ID Hg19

Library idBAMCTSS
CNhs12185 DRZ000353 DRZ001738
RDhi10011 DRZ002994
Accession ID Hg38

Library idBAMCTSS
CNhs12185 DRZ011703 DRZ013088
RDhi10011
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.1
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.28
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0.0902
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0.294
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.273
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0.366
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.521
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0.75
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.277
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary1.457
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.449
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.21
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.571
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0.0292
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0.0158
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80.36
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0.216
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0.951
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40.172
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.483
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0.22
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0.22
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0.11
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0.22
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix1.064
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.757
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12185

Jaspar motifP-value
MA0002.28.59857e-6
MA0003.10.346
MA0004.10.372
MA0006.10.538
MA0007.10.496
MA0009.10.951
MA0014.10.722
MA0017.10.0195
MA0018.20.983
MA0019.10.591
MA0024.10.996
MA0025.10.424
MA0027.10.431
MA0028.13.2637e-5
MA0029.10.488
MA0030.10.00943
MA0031.10.0387
MA0035.20.346
MA0038.10.348
MA0039.20.341
MA0040.10.884
MA0041.10.135
MA0042.10.713
MA0043.10.663
MA0046.10.333
MA0047.20.183
MA0048.10.472
MA0050.11.45038e-11
MA0051.11.28158e-5
MA0052.10.0991
MA0055.10.617
MA0057.10.814
MA0058.10.235
MA0059.10.343
MA0060.10.584
MA0061.15.7299e-5
MA0062.22.85816e-15
MA0065.20.0188
MA0066.10.249
MA0067.10.563
MA0068.10.364
MA0069.10.265
MA0070.10.467
MA0071.10.595
MA0072.10.611
MA0073.10.451
MA0074.10.666
MA0076.16.66016e-9
MA0077.10.274
MA0078.10.699
MA0079.20.518
MA0080.22.80955e-12
MA0081.16.61575e-4
MA0083.10.073
MA0084.10.521
MA0087.10.6
MA0088.10.115
MA0090.11.14564e-4
MA0091.10.5
MA0092.10.999
MA0093.10.456
MA0099.28.53768e-5
MA0100.10.213
MA0101.10.00456
MA0102.20.441
MA0103.10.00407
MA0104.20.139
MA0105.15.77482e-7
MA0106.10.419
MA0107.10.00305
MA0108.28.38861e-8
MA0111.10.342
MA0112.20.0115
MA0113.10.959
MA0114.10.0633
MA0115.10.321
MA0116.11.68915e-5
MA0117.10.822
MA0119.10.62
MA0122.10.296
MA0124.10.833
MA0125.10.963
MA0131.10.16
MA0135.10.0553
MA0136.11.2912e-18
MA0137.20.456
MA0138.20.375
MA0139.10.165
MA0140.10.135
MA0141.10.844
MA0142.10.114
MA0143.10.913
MA0144.10.884
MA0145.10.963
MA0146.10.205
MA0147.10.144
MA0148.10.829
MA0149.10.0875
MA0150.10.596
MA0152.10.199
MA0153.10.0792
MA0154.12.98064e-4
MA0155.10.796
MA0156.12.16551e-15
MA0157.10.0711
MA0159.10.0345
MA0160.10.343
MA0162.10.754
MA0163.13.57029e-9
MA0164.10.913
MA0258.10.077
MA0259.10.508



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12185

Novel motifP-value
10.0937
100.0493
1000.595
1010.392
1020.68
1030.113
1040.174
1050.262
1060.663
1070.361
1080.362
1090.0587
110.087
1100.199
1110.104
1120.239
1130.0365
1140.354
1150.817
1160.864
1170.00231
1180.2
1190.998
120.816
1200.561
1210.356
1220.32
1230.103
1240.0984
1250.346
1260.11
1270.533
1280.558
1290.718
130.402
1300.358
1310.716
1320.346
1330.00482
1340.523
1350.342
1360.416
1370.0633
1380.355
1390.0702
140.359
1400.672
1410.253
1420.72
1430.0369
1440.752
1450.211
1460.163
1470.0815
1480.143
1490.53
150.207
1500.711
1510.439
1520.856
1530.65
1540.776
1550.00795
1560.385
1570.263
1580.141
1590.184
160.98
1600.284
1610.114
1620.993
1630.206
1640.596
1650.255
1660.258
1670.14
1680.147
1690.443
170.94
180.548
190.883
20.972
200.792
210.816
220.725
230.695
240.321
250.0353
260.182
270.242
280.513
290.0668
30.0371
300.454
310.732
320.27
330.376
340.755
350.174
360.0252
370.11
380.364
390.52
40.576
400.154
410.177
420.0822
430.155
440.391
450.88
460.203
470.0738
480.111
490.122
50.307
500.978
510.463
520.448
530.376
540.844
550.119
560.591
570.63
580.0161
590.266
60.848
600.582
610.0294
620.0178
630.681
640.214
650.565
660.712
670.361
680.729
690.757
70.123
700.128
710.0497
720.0401
730.504
740.372
750.00773
760.0891
770.812
780.146
790.443
80.538
800.00255
810.183
820.0824
830.561
840.329
850.813
860.105
870.0965
880.723
890.829
90.363
900.0475
910.842
920.546
930.736
940.0357
950.00616
960.501
970.556
980.0864
990.103



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs12185


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0002371 (somatic cell)
0000542 (lymphocyte)
0000219 (motile cell)
0000945 (lymphocyte of B lineage)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0002242 (nucleate cell)
0000255 (eukaryotic cell)
0000236 (B cell)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000025 (CD19-positive B cell sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)
CL:0000051 (common lymphoid progenitor)

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